Polyphenol oxidase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1391 |
| Acc36I | ACCTGC | 1 cut(s) | 1309 |
| AccB1I | GGYRCC | 4 cut(s) | 266, 926, 998, 1729 |
| AccBSI | CCGCTC | 2 cut(s) | 1337, 1697 |
| AccII | CGCG | 1 cut(s) | 959 |
| AccIII | TCCGGA | 1 cut(s) | 601 |
| AclWI | GGATC | 2 cut(s) | 421, 1094 |
| AcoI | YGGCCR | 5 cut(s) | 3, 342, 477, 897, 952 |
| AcvI | CACGTG | 1 cut(s) | 1615 |
| AcyI | GRCGYC | 3 cut(s) | 267, 1203, 1388 |
| AfaI | GTAC | 6 cut(s) | 473, 659, 665, 800, 908, 962 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 593, 823, 916, 1036, 1066, 1663, 1764 |
| AflIII | ACRYGT | 1 cut(s) | 957 |
| AgsI | TTSAA | 3 cut(s) | 412, 487, 1771 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1564 |
| AjiI | CACGTC | 1 cut(s) | 865 |
| AjnI | CCWGG | 2 cut(s) | 495, 1173 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1646, 1678 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1496, 1528 |
| Alw21I | GWGCWC | 1 cut(s) | 1614 |
| Alw44I | GTGCAC | 1 cut(s) | 1610 |
| AlwI | GGATC | 2 cut(s) | 421, 1094 |
| Aor13HI | TCCGGA | 1 cut(s) | 601 |
| AoxI | GGCC | 9 cut(s) | 3, 247, 342, 443, 477, 498, 897, 952, 1439 |
| ApaLI | GTGCAC | 1 cut(s) | 1610 |
| ApeKI | GCWGC | 6 cut(s) | 378, 433, 1279, 1373, 1381, 1489 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 692, 724, 1496, 1528 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 290 |
| AspA2I | CCTAGG | 1 cut(s) | 1733 |
| AspLEI | GCGC | 2 cut(s) | 269, 1173 |
| AspS9I | GGNCC | 5 cut(s) | 444, 835, 973, 1132, 1143 |
| AsuC2I | CCSGG | 1 cut(s) | 996 |
| AsuHPI | GGTGA | 6 cut(s) | 343, 374, 1174, 1543, 1732, 1747 |
| AsuII | TTCGAA | 1 cut(s) | 1742 |
| AvaII | GGWCC | 4 cut(s) | 835, 973, 1132, 1143 |
| AvrII | CCTAGG | 1 cut(s) | 1733 |
| BaeGI | GKGCMC | 2 cut(s) | 35, 1614 |
| BalI | TGGCCA | 3 cut(s) | 5, 479, 899 |
| BanI | GGYRCC | 4 cut(s) | 266, 926, 998, 1729 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 650, 682 |
| BbrPI | CACGTG | 1 cut(s) | 1615 |
| BbsI | GAAGAC | 4 cut(s) | 1301, 1634, 1649, 1655 |
| Bbv12I | GWGCWC | 1 cut(s) | 1614 |
| BbvI | GCAGC | 6 cut(s) | 365, 420, 1291, 1360, 1393, 1476 |
| BccI | CCATC | 5 cut(s) | 908, 910, 1010, 1038, 1154 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 415, 449 |
| BciT130I | CCWGG | 2 cut(s) | 497, 1175 |
| BclI | TGATCA | 1 cut(s) | 1494 |
| BcnI | CCSGG | 1 cut(s) | 996 |
| BfaI | CTAG | 1 cut(s) | 1734 |
| BfoI | RGCGCY | 2 cut(s) | 270, 1174 |
| BfuAI | ACCTGC | 1 cut(s) | 1309 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 255 |
| BisI | GCNGC | 9 cut(s) | 379, 434, 450, 501, 821, 1280, 1374, 1382, 1490 |
| BlnI | CCTAGG | 1 cut(s) | 1733 |
| BlpI | GCTNAGC | 1 cut(s) | 1233 |
| BlsI | GCNGC | 9 cut(s) | 380, 435, 451, 502, 822, 1281, 1375, 1383, 1491 |
| BmcAI | AGTACT | 1 cut(s) | 473 |
| Bme1390I | CCNGG | 3 cut(s) | 497, 996, 1175 |
| Bme18I | GGWCC | 4 cut(s) | 835, 973, 1132, 1143 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1564 |
| BmgBI | CACGTC | 1 cut(s) | 865 |
| BmgT120I | GGNCC | 5 cut(s) | 444, 835, 973, 1132, 1143 |
| BmiI | GGNNCC | 5 cut(s) | 268, 928, 974, 1000, 1731 |
| BmrFI | CCNGG | 3 cut(s) | 497, 996, 1175 |
| BmrI | ACTGGG | 1 cut(s) | 739 |
| BmuI | ACTGGG | 1 cut(s) | 739 |
| BpiI | GAAGAC | 4 cut(s) | 1301, 1634, 1649, 1655 |
| BpmI | CTGGAG | 1 cut(s) | 723 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1365 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1233 |
| Bpu14I | TTCGAA | 1 cut(s) | 1742 |
| BpuMI | CCSGG | 1 cut(s) | 996 |
| BsaAI | YACGTR | 3 cut(s) | 131, 533, 1615 |
| BsaHI | GRCGYC | 3 cut(s) | 267, 1203, 1388 |
| BsaWI | WCCGGW | 3 cut(s) | 356, 601, 923 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 764, 791, 794, 821, 1070, 1100 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 593, 823, 916, 1036, 1066, 1663, 1764 |
| Bse118I | RCCGGY | 2 cut(s) | 823, 1091 |
| Bse1I | ACTGG | 3 cut(s) | 728, 734, 796 |
| Bse3DI | GCAATG | 1 cut(s) | 1120 |
| BseAI | TCCGGA | 1 cut(s) | 601 |
| BseBI | CCWGG | 2 cut(s) | 497, 1175 |
| BseGI | GGATG | 2 cut(s) | 1026, 1708 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 593, 823, 916, 1036, 1066, 1663, 1764 |
| BseMI | GCAATG | 1 cut(s) | 1120 |
| BseMII | CTCAG | 3 cut(s) | 1224, 1554, 1562 |
| BseNI | ACTGG | 3 cut(s) | 728, 734, 796 |
| BseRI | GAGGAG | 3 cut(s) | 1471, 1496, 1499 |
| BseSI | GKGCMC | 2 cut(s) | 35, 1614 |
| BseXI | GCAGC | 6 cut(s) | 365, 420, 1291, 1360, 1393, 1476 |
| BseYI | CCCAGC | 4 cut(s) | 453, 968, 1399, 1598 |
| Bsh1236I | CGCG | 1 cut(s) | 959 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1096 |
| BshFI | GGCC | 9 cut(s) | 5, 249, 344, 445, 479, 500, 899, 954, 1441 |
| BshNI | GGYRCC | 4 cut(s) | 266, 926, 998, 1729 |
| BsiEI | CGRYCG | 1 cut(s) | 1096 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1614 |
| BsiSI | CCGG | 6 cut(s) | 357, 602, 824, 924, 996, 1092 |
| BslFI | GGGAC | 5 cut(s) | 356, 746, 986, 1271, 1595 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 593, 823, 916, 1036, 1066, 1663, 1764 |
| BsmFI | GGGAC | 5 cut(s) | 356, 746, 986, 1271, 1595 |
| BsnI | GGCC | 9 cut(s) | 5, 249, 344, 445, 479, 500, 899, 954, 1441 |
| Bsp119I | TTCGAA | 1 cut(s) | 1742 |
| Bsp1286I | GDGCHC | 2 cut(s) | 35, 1614 |
| Bsp13I | TCCGGA | 1 cut(s) | 601 |
| Bsp143I | GATC | 7 cut(s) | 399, 426, 940, 1099, 1494, 1752, 1773 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1233 |
| Bsp19I | CCATGG | 1 cut(s) | 27 |
| BspANI | GGCC | 9 cut(s) | 5, 249, 344, 445, 479, 500, 899, 954, 1441 |
| BspCNI | CTCAG | 3 cut(s) | 1225, 1555, 1563 |
| BspEI | TCCGGA | 1 cut(s) | 601 |
| BspFNI | CGCG | 1 cut(s) | 959 |
| BspLI | GGNNCC | 5 cut(s) | 268, 928, 974, 1000, 1731 |
| BspMI | ACCTGC | 1 cut(s) | 1309 |
| BspPI | GGATC | 2 cut(s) | 421, 1094 |
| BspQI | GCTCTTC | 2 cut(s) | 641, 720 |
| BspT104I | TTCGAA | 1 cut(s) | 1742 |
| BspT107I | GGYRCC | 4 cut(s) | 266, 926, 998, 1729 |
| BsrBI | CCGCTC | 2 cut(s) | 1337, 1697 |
| BsrDI | GCAATG | 1 cut(s) | 1120 |
| BsrFI | RCCGGY | 2 cut(s) | 823, 1091 |
| BsrI | ACTGG | 3 cut(s) | 728, 734, 796 |
| BssAI | RCCGGY | 2 cut(s) | 823, 1091 |
| BssMI | GATC | 7 cut(s) | 399, 426, 940, 1099, 1494, 1752, 1773 |
| BssNI | GRCGYC | 3 cut(s) | 267, 1203, 1388 |
| BssT1I | CCWWGG | 3 cut(s) | 27, 1159, 1733 |
| Bst2UI | CCWGG | 2 cut(s) | 497, 1175 |
| Bst4CI | ACNGT | 9 cut(s) | 170, 370, 563, 572, 578, 848, 911, 1247, 1426 |
| Bst6I | CTCTTC | 4 cut(s) | 46, 641, 720, 1448 |
| BstACI | GRCGYC | 3 cut(s) | 267, 1203, 1388 |
| BstBAI | YACGTR | 3 cut(s) | 131, 533, 1615 |
| BstBI | TTCGAA | 1 cut(s) | 1742 |
| BstC8I | GCNNGC | 7 cut(s) | 116, 338, 342, 447, 689, 745, 1169 |
| BstDEI | CTNAG | 4 cut(s) | 1233, 1365, 1563, 1571 |
| BstDSI | CCRYGG | 2 cut(s) | 27, 1313 |
| BstF5I | GGATG | 2 cut(s) | 1026, 1708 |
| BstFNI | CGCG | 1 cut(s) | 959 |
| BstH2I | RGCGCY | 2 cut(s) | 270, 1174 |
| BstHHI | GCGC | 2 cut(s) | 269, 1173 |
| BstKTI | GATC | 7 cut(s) | 402, 429, 943, 1102, 1497, 1755, 1776 |
| BstMBI | GATC | 7 cut(s) | 399, 426, 940, 1099, 1494, 1752, 1773 |
| BstMCI | CGRYCG | 1 cut(s) | 1096 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 255, 264, 442, 500, 509, 965, 1370 |
| BstNI | CCWGG | 2 cut(s) | 497, 1175 |
| BstNSI | RCATGY | 3 cut(s) | 658, 1015, 1141 |
| BstSCI | CCNGG | 3 cut(s) | 495, 994, 1173 |
| BstSLI | GKGCMC | 2 cut(s) | 35, 1614 |
| BstUI | CGCG | 1 cut(s) | 959 |
| BstV1I | GCAGC | 6 cut(s) | 365, 420, 1291, 1360, 1393, 1476 |
| BstV2I | GAAGAC | 4 cut(s) | 1301, 1634, 1649, 1655 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 28 |
| BsuRI | GGCC | 9 cut(s) | 5, 249, 344, 445, 479, 500, 899, 954, 1441 |
| BtgI | CCRYGG | 2 cut(s) | 27, 1313 |
| BtrI | CACGTC | 1 cut(s) | 865 |
| BtsCI | GGATG | 2 cut(s) | 1026, 1708 |
| BtsI | GCAGTG | 2 cut(s) | 6, 1717 |
| BtsIMutI | CAGTG | 3 cut(s) | 6, 559, 1717 |
| BveI | ACCTGC | 1 cut(s) | 1309 |
| Cac8I | GCNNGC | 7 cut(s) | 116, 338, 342, 447, 689, 745, 1169 |
| CfoI | GCGC | 2 cut(s) | 269, 1173 |
| Cfr10I | RCCGGY | 2 cut(s) | 823, 1091 |
| Cfr13I | GGNCC | 5 cut(s) | 444, 835, 973, 1132, 1143 |
| CseI | GACGC | 3 cut(s) | 1211, 1387, 1568 |
| Csp6I | GTAC | 6 cut(s) | 472, 658, 664, 799, 907, 961 |
| CviQI | GTAC | 6 cut(s) | 472, 658, 664, 799, 907, 961 |
| DdeI | CTNAG | 4 cut(s) | 1233, 1365, 1563, 1571 |
| DinI | GGCGCC | 1 cut(s) | 268 |
| DpnI | GATC | 7 cut(s) | 401, 428, 942, 1101, 1496, 1754, 1775 |
| DpnII | GATC | 7 cut(s) | 399, 426, 940, 1099, 1494, 1752, 1773 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1564 |
| EaeI | YGGCCR | 5 cut(s) | 3, 342, 477, 897, 952 |
| Eam1104I | CTCTTC | 4 cut(s) | 46, 641, 720, 1448 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1564 |
| EarI | CTCTTC | 4 cut(s) | 46, 641, 720, 1448 |
| EciI | GGCGGA | 1 cut(s) | 1078 |
| Eco130I | CCWWGG | 3 cut(s) | 27, 1159, 1733 |
| Eco47I | GGWCC | 4 cut(s) | 835, 973, 1132, 1143 |
| Eco72I | CACGTG | 1 cut(s) | 1615 |
| EcoO109I | RGGNCCY | 1 cut(s) | 973 |
| EcoRII | CCWGG | 2 cut(s) | 495, 1173 |
| EcoT14I | CCWWGG | 3 cut(s) | 27, 1159, 1733 |
| EgeI | GGCGCC | 1 cut(s) | 268 |
| EheI | GGCGCC | 1 cut(s) | 268 |
| ErhI | CCWWGG | 3 cut(s) | 27, 1159, 1733 |
| FaqI | GGGAC | 5 cut(s) | 356, 746, 986, 1271, 1595 |
| FauI | CCCGC | 2 cut(s) | 438, 454 |
| FbaI | TGATCA | 1 cut(s) | 1494 |
| Fnu4HI | GCNGC | 9 cut(s) | 379, 434, 450, 501, 821, 1280, 1374, 1382, 1490 |
| FokI | GGATG | 2 cut(s) | 1013, 1715 |
| Fsp4HI | GCNGC | 9 cut(s) | 379, 434, 450, 501, 821, 1280, 1374, 1382, 1490 |
| FspBI | CTAG | 1 cut(s) | 1734 |
| GlaI | GCGC | 2 cut(s) | 268, 1172 |
| GluI | GCNGC | 9 cut(s) | 379, 434, 450, 501, 821, 1280, 1374, 1382, 1490 |
| GsaI | CCCAGC | 4 cut(s) | 457, 972, 1403, 1602 |
| GsuI | CTGGAG | 1 cut(s) | 723 |
| HaeII | RGCGCY | 2 cut(s) | 270, 1174 |
| HaeIII | GGCC | 9 cut(s) | 5, 249, 344, 445, 479, 500, 899, 954, 1441 |
| HapII | CCGG | 6 cut(s) | 357, 602, 824, 924, 996, 1092 |
| HgaI | GACGC | 3 cut(s) | 1211, 1387, 1568 |
| HhaI | GCGC | 2 cut(s) | 269, 1173 |
| Hin1I | GRCGYC | 3 cut(s) | 267, 1203, 1388 |
| Hin6I | GCGC | 2 cut(s) | 267, 1171 |
| HinP1I | GCGC | 2 cut(s) | 267, 1171 |
| HinfI | GANTC | 8 cut(s) | 200, 678, 734, 892, 1306, 1412, 1565, 1573 |
| HpaII | CCGG | 6 cut(s) | 357, 602, 824, 924, 996, 1092 |
| HphI | GGTGA | 6 cut(s) | 343, 374, 1174, 1543, 1732, 1747 |
| Hpy166II | GTNNAC | 9 cut(s) | 559, 622, 835, 868, 1132, 1143, 1243, 1323, 1612 |
| Hpy188I | TCNGA | 4 cut(s) | 811, 915, 1578, 1591 |
| Hpy8I | GTNNAC | 9 cut(s) | 559, 622, 835, 868, 1132, 1143, 1243, 1323, 1612 |
| Hpy99I | CGWCG | 8 cut(s) | 1205, 1226, 1381, 1393, 1426, 1559, 1562, 1636 |
| HpyAV | CCTTC | 7 cut(s) | 73, 307, 418, 655, 1459, 1465, 1630 |
| HpyCH4III | ACNGT | 9 cut(s) | 170, 370, 563, 572, 578, 848, 911, 1247, 1426 |
| HpyCH4IV | ACGT | 8 cut(s) | 123, 130, 532, 864, 1128, 1388, 1406, 1614 |
| HpyCH4V | TGCA | 7 cut(s) | 11, 128, 150, 544, 581, 1125, 1612 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 255, 264, 442, 500, 509, 965, 1370 |
| HpyF3I | CTNAG | 4 cut(s) | 1233, 1365, 1563, 1571 |
| HpySE526I | ACGT | 8 cut(s) | 123, 130, 532, 864, 1128, 1388, 1406, 1614 |
| Hsp92I | GRCGYC | 3 cut(s) | 267, 1203, 1388 |
| HspAI | GCGC | 2 cut(s) | 267, 1171 |
| KasI | GGCGCC | 1 cut(s) | 266 |
| Kpn2I | TCCGGA | 1 cut(s) | 601 |
| Ksp22I | TGATCA | 1 cut(s) | 1494 |
| Kzo9I | GATC | 7 cut(s) | 399, 426, 940, 1099, 1494, 1752, 1773 |
| LguI | GCTCTTC | 2 cut(s) | 641, 720 |
| LmnI | GCTCC | 5 cut(s) | 785, 1458, 1486, 1602, 1694 |
| Lsp1109I | GCAGC | 6 cut(s) | 365, 420, 1291, 1360, 1393, 1476 |
| MaeI | CTAG | 1 cut(s) | 1734 |
| MaeII | ACGT | 8 cut(s) | 123, 130, 532, 864, 1128, 1388, 1406, 1614 |
| MaeIII | GTNAC | 5 cut(s) | 388, 460, 572, 1520, 1720 |
| MalI | GATC | 7 cut(s) | 401, 428, 942, 1101, 1496, 1754, 1775 |
| MbiI | CCGCTC | 2 cut(s) | 1337, 1697 |
| MboI | GATC | 7 cut(s) | 399, 426, 940, 1099, 1494, 1752, 1773 |
| MhlI | GDGCHC | 2 cut(s) | 35, 1614 |
| MlsI | TGGCCA | 3 cut(s) | 5, 479, 899 |
| MluCI | AATT | 5 cut(s) | 58, 221, 753, 1291, 1661 |
| MluI | ACGCGT | 1 cut(s) | 957 |
| MluNI | TGGCCA | 3 cut(s) | 5, 479, 899 |
| Mly113I | GGCGCC | 1 cut(s) | 267 |
| MlyI | GAGTC | 5 cut(s) | 728, 1315, 1406, 1574, 1582 |
| MmeI | TCCRAC | 3 cut(s) | 834, 1556, 1662 |
| Mox20I | TGGCCA | 3 cut(s) | 5, 479, 899 |
| MroI | TCCGGA | 1 cut(s) | 601 |
| MroXI | GAANNNNTTC | 1 cut(s) | 290 |
| MscI | TGGCCA | 3 cut(s) | 5, 479, 899 |
| MseI | TTAA | 3 cut(s) | 326, 1500, 1551 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| Msp20I | TGGCCA | 3 cut(s) | 5, 479, 899 |
| MspA1I | CMGCKG | 3 cut(s) | 340, 433, 1384 |
| MspI | CCGG | 6 cut(s) | 357, 602, 824, 924, 996, 1092 |
| MspR9I | CCNGG | 3 cut(s) | 497, 996, 1175 |
| MvaI | CCWGG | 2 cut(s) | 497, 1175 |
| MvnI | CGCG | 1 cut(s) | 959 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 255, 264, 442, 500, 509, 965, 1370 |
| NarI | GGCGCC | 1 cut(s) | 267 |
| NciI | CCSGG | 1 cut(s) | 996 |
| NcoI | CCATGG | 1 cut(s) | 27 |
| NdeII | GATC | 7 cut(s) | 399, 426, 940, 1099, 1494, 1752, 1773 |
| NlaIV | GGNNCC | 5 cut(s) | 268, 928, 974, 1000, 1731 |
| NmeAIII | GCCGAG | 4 cut(s) | 663, 819, 1231, 1473 |
| NmuCI | GTSAC | 3 cut(s) | 388, 460, 1720 |
| NspI | RCATGY | 3 cut(s) | 658, 1015, 1141 |
| NspV | TTCGAA | 1 cut(s) | 1742 |
| PciSI | GCTCTTC | 2 cut(s) | 641, 720 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 300, 1385, 1521, 1637, 1748 |
| PdmI | GAANNNNTTC | 1 cut(s) | 290 |
| PfeI | GAWTC | 3 cut(s) | 200, 678, 892 |
| PkrI | GCNGC | 9 cut(s) | 380, 435, 451, 502, 822, 1281, 1375, 1383, 1491 |
| PleI | GAGTC | 5 cut(s) | 728, 1314, 1406, 1573, 1581 |
| PluTI | GGCGCC | 1 cut(s) | 270 |
| PmaCI | CACGTG | 1 cut(s) | 1615 |
| PmlI | CACGTG | 1 cut(s) | 1615 |
| PpsI | GAGTC | 5 cut(s) | 728, 1314, 1406, 1573, 1581 |
| Ppu21I | YACGTR | 3 cut(s) | 131, 533, 1615 |
| PpuMI | RGGWCCY | 1 cut(s) | 973 |
| Psp5II | RGGWCCY | 1 cut(s) | 973 |
| Psp6I | CCWGG | 2 cut(s) | 495, 1173 |
| PspCI | CACGTG | 1 cut(s) | 1615 |
| PspFI | CCCAGC | 4 cut(s) | 453, 968, 1399, 1598 |
| PspGI | CCWGG | 2 cut(s) | 495, 1173 |
| PspN4I | GGNNCC | 5 cut(s) | 268, 928, 974, 1000, 1731 |
| PspPI | GGNCC | 5 cut(s) | 444, 835, 973, 1132, 1143 |
| PspPPI | RGGWCCY | 1 cut(s) | 973 |
| PvuII | CAGCTG | 2 cut(s) | 340, 1384 |
| RsaI | GTAC | 6 cut(s) | 473, 659, 665, 800, 908, 962 |
| RsaNI | GTAC | 6 cut(s) | 472, 658, 664, 799, 907, 961 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| SapI | GCTCTTC | 2 cut(s) | 641, 720 |
| SaqAI | TTAA | 3 cut(s) | 326, 1500, 1551 |
| SatI | GCNGC | 9 cut(s) | 379, 434, 450, 501, 821, 1280, 1374, 1382, 1490 |
| Sau3AI | GATC | 7 cut(s) | 399, 426, 940, 1099, 1494, 1752, 1773 |
| Sau96I | GGNCC | 5 cut(s) | 444, 835, 973, 1132, 1143 |
| ScaI | AGTACT | 1 cut(s) | 473 |
| SchI | GAGTC | 5 cut(s) | 728, 1315, 1406, 1574, 1582 |
| ScrFI | CCNGG | 3 cut(s) | 497, 996, 1175 |
| SduI | GDGCHC | 2 cut(s) | 35, 1614 |
| SfoI | GGCGCC | 1 cut(s) | 268 |
| SfuI | TTCGAA | 1 cut(s) | 1742 |
| SinI | GGWCC | 4 cut(s) | 835, 973, 1132, 1143 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| Sse9I | AATT | 5 cut(s) | 58, 221, 753, 1291, 1661 |
| SspDI | GGCGCC | 1 cut(s) | 266 |
| SspMI | CTAG | 1 cut(s) | 1734 |
| StyD4I | CCNGG | 3 cut(s) | 495, 994, 1173 |
| StyI | CCWWGG | 3 cut(s) | 27, 1159, 1733 |
| TaaI | ACNGT | 9 cut(s) | 170, 370, 563, 572, 578, 848, 911, 1247, 1426 |
| TaiI | ACGT | 8 cut(s) | 126, 133, 535, 867, 1131, 1391, 1409, 1617 |
| TasI | AATT | 5 cut(s) | 58, 221, 753, 1291, 1661 |
| TatI | WGTACW | 4 cut(s) | 471, 657, 663, 798 |
| TauI | GCSGC | 3 cut(s) | 452, 503, 823 |
| TfiI | GAWTC | 3 cut(s) | 200, 678, 892 |
| Tru1I | TTAA | 3 cut(s) | 326, 1500, 1551 |
| Tru9I | TTAA | 3 cut(s) | 326, 1500, 1551 |
| TscAI | CASTG | 3 cut(s) | 13, 566, 1717 |
| TseFI | GTSAC | 3 cut(s) | 388, 460, 1720 |
| TseI | GCWGC | 6 cut(s) | 378, 433, 1279, 1373, 1381, 1489 |
| Tsp45I | GTSAC | 3 cut(s) | 388, 460, 1720 |
| TspDTI | ATGAA | 2 cut(s) | 201, 618 |
| TspGWI | ACGGA | 3 cut(s) | 479, 1302, 1688 |
| TspRI | CASTG | 3 cut(s) | 13, 566, 1717 |
| VneI | GTGCAC | 1 cut(s) | 1610 |
| VpaK11BI | GGWCC | 4 cut(s) | 835, 973, 1132, 1143 |
| XceI | RCATGY | 3 cut(s) | 658, 1015, 1141 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 337, 726 |
| XmaJI | CCTAGG | 1 cut(s) | 1733 |
| XmnI | GAANNNNTTC | 1 cut(s) | 290 |
| XspI | CTAG | 1 cut(s) | 1734 |
| ZraI | GACGTC | 1 cut(s) | 1389 |
| ZrmI | AGTACT | 1 cut(s) | 473 |