RchiOBHm_Chr6g0264881

Common central domain of tyrosinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
20193356 .. 20193634
279 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23755

Sequence Viewer

Length: 279 bp
ATGAAGTCACTTTCTTACAGTGACCCTCGGAGTTTTCGTCGTCATGCTGATATACATTGCATCTTTTGCACTGGTGCTTATGACCACCCACATTCCCACTGCCCTCTCAAAATCCATCGGAACTGGTTCTTTTTTTCATGGCACCGGATGCTGCTTCACTTCCACGAACGCATCGTTGGAAGCCTAATTGGTGATGACACATTTGCTCCGCCATTTTGGAATTGGGACTGCCCTGATGGAATGGCAATGCCTGAATGGTACATGCATTCACTTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

92

Amino Acids

11.12

Weight (kDa)

6.78

Isoelectric Point (pI)

52.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tyrosinase PF00264 10 - 78 8.5e-11 Common central domain of tyrosinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 141
AciI CCGC 1 cut(s) 209
AfaI GTAC 1 cut(s) 260
AjuI GAANNNNNNNTTGG 2 cut(s) 159, 191
ApeKI GCWGC 1 cut(s) 151
Asp700I GAANNNNTTC 1 cut(s) 125
AsuHPI GGTGA 1 cut(s) 203
BanI GGYRCC 1 cut(s) 141
BbvI GCAGC 1 cut(s) 138
BccI CCATC 2 cut(s) 123, 230
BisI GCNGC 1 cut(s) 152
BlsI GCNGC 1 cut(s) 153
BmiI GGNNCC 1 cut(s) 143
BmsI GCATC 3 cut(s) 69, 138, 180
BsaJI CCNNGG 1 cut(s) 26
BsaWI WCCGGW 1 cut(s) 144
BsaXI ACNNNNNCTCC 4 cut(s) 22, 52, 190, 220
Bse1I ACTGG 2 cut(s) 76, 128
Bse3DI GCAATG 2 cut(s) 55, 252
BseDI CCNNGG 1 cut(s) 26
BseGI GGATG 1 cut(s) 153
BseMI GCAATG 2 cut(s) 55, 252
BseNI ACTGG 2 cut(s) 76, 128
BseXI GCAGC 1 cut(s) 138
BshNI GGYRCC 1 cut(s) 141
BsiSI CCGG 1 cut(s) 145
BslFI GGGAC 1 cut(s) 239
BsmFI GGGAC 1 cut(s) 239
BsmI GAATGC 1 cut(s) 265
BspACI CCGC 1 cut(s) 209
BspLI GGNNCC 1 cut(s) 143
BspT107I GGYRCC 1 cut(s) 141
BsrDI GCAATG 2 cut(s) 55, 252
BsrI ACTGG 2 cut(s) 76, 128
BssECI CCNNGG 1 cut(s) 26
Bst4CI ACNGT 1 cut(s) 20
BstAPI GCANNNNNTGC 2 cut(s) 66, 148
BstF5I GGATG 1 cut(s) 153
BstMWI GCNNNNNNNGC 2 cut(s) 66, 148
BstNSI RCATGY 1 cut(s) 265
BstV1I GCAGC 1 cut(s) 138
BtsCI GGATG 1 cut(s) 153
BtsI GCAGTG 1 cut(s) 97
BtsIMutI CAGTG 3 cut(s) 25, 69, 97
Csp6I GTAC 1 cut(s) 259
CviAII CATG 3 cut(s) 44, 138, 262
CviJI RGCY 1 cut(s) 183
CviKI_1 RGCY 1 cut(s) 183
CviQI GTAC 1 cut(s) 259
EciI GGCGGA 1 cut(s) 198
EcoT22I ATGCAT 1 cut(s) 267
FaeI CATG 3 cut(s) 47, 141, 265
FaiI YATR 5 cut(s) 45, 53, 81, 139, 263
FaqI GGGAC 1 cut(s) 239
FatI CATG 3 cut(s) 43, 137, 261
Fnu4HI GCNGC 1 cut(s) 152
FokI GGATG 1 cut(s) 160
Fsp4HI GCNGC 1 cut(s) 152
GluI GCNGC 1 cut(s) 152
HapII CCGG 1 cut(s) 145
Hin1II CATG 3 cut(s) 47, 141, 265
HpaII CCGG 1 cut(s) 145
HphI GGTGA 1 cut(s) 203
Hpy188I TCNGA 2 cut(s) 30, 120
Hpy99I CGWCG 1 cut(s) 42
HpyCH4III ACNGT 1 cut(s) 20
HpyCH4V TGCA 3 cut(s) 60, 69, 265
HpyF10VI GCNNNNNNNGC 2 cut(s) 66, 148
Hsp92II CATG 3 cut(s) 47, 141, 265
LmnI GCTCC 1 cut(s) 211
LpnPI CCDG 5 cut(s) 57, 109, 158, 246, 264
Lsp1109I GCAGC 1 cut(s) 138
LweI GCATC 3 cut(s) 69, 138, 180
MaeIII GTNAC 2 cut(s) 6, 20
MluCI AATT 2 cut(s) 186, 220
MmeI TCCRAC 1 cut(s) 157
MnlI CCTC 2 cut(s) 36, 114
Mph1103I ATGCAT 1 cut(s) 267
MroXI GAANNNNTTC 1 cut(s) 125
MspI CCGG 1 cut(s) 145
Mva1269I GAATGC 1 cut(s) 265
MwoI GCNNNNNNNGC 2 cut(s) 66, 148
NlaIII CATG 3 cut(s) 47, 141, 265
NlaIV GGNNCC 1 cut(s) 143
NmuCI GTSAC 2 cut(s) 6, 20
NsiI ATGCAT 1 cut(s) 267
NspI RCATGY 1 cut(s) 265
PcsI WCGNNNNNNNCGW 2 cut(s) 34, 171
PctI GAATGC 1 cut(s) 265
PdmI GAANNNNTTC 1 cut(s) 125
PkrI GCNGC 1 cut(s) 153
PspN4I GGNNCC 1 cut(s) 143
RsaI GTAC 1 cut(s) 260
RsaNI GTAC 1 cut(s) 259
SatI GCNGC 1 cut(s) 152
SfaNI GCATC 3 cut(s) 69, 138, 180
Sse9I AATT 2 cut(s) 186, 220
SsiI CCGC 1 cut(s) 209
TaaI ACNGT 1 cut(s) 20
TasI AATT 2 cut(s) 186, 220
TscAI CASTG 3 cut(s) 25, 76, 104
TseFI GTSAC 2 cut(s) 6, 20
TseI GCWGC 1 cut(s) 151
Tsp45I GTSAC 2 cut(s) 6, 20
TspDTI ATGAA 2 cut(s) 17, 126
TspRI CASTG 3 cut(s) 25, 76, 104
XceI RCATGY 1 cut(s) 265
XcmI CCANNNNNNNNNTGG 1 cut(s) 219
XmnI GAANNNNTTC 1 cut(s) 125
Zsp2I ATGCAT 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.