Prupe.8G095500_v2.0.a1

Protein of unknown function (DUF_B2219)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000836
Physical Location & Seq
Forward (+)
12768983 .. 12770315
1333 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G095500.1

Sequence Viewer

Length: 522 bp
ATGGCTGAATATGCGTCCAAAGCCTTATATATTCCATCCAAAATGGACATGCAAGCTCTGAAACTAAGAGAAAACAAAACCATATTACAATCGCCGCGTGAGCGCATATTATCAACAGAGTTTGGATCGAGCGGTCGAAATCTTGACAGCTACATAACAGTAAAGGTGCAAAGGTTGAAATACAATAGAAGAAAGCAAGCAAAAGAAGAAGAGGAAGAGGTCTTGGTTGTTCATGGAATTGATGTCCAAAGTGATGAGTACGTTAAATTTGATGTCTATATAAATTTAGTGGATGAGAGTATAGTTAGCCCAAGTTTCAGTGAATTTGTAGGAACCTTTGTTCACATACCTCACGGCAAGAGGGATGCTAATGGAAAAACCAATCTCAAGTTGGGGATCTCAGAAGTACTAGAAGATTTGGAGGCAGATAGCGATGAGAGCATTTGGGTGACATTGATACCAAGGACTAAATCTTGCACTTACACAATAATTGATGGACTGCAGATTGAATATATGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00350 ko00950 ko01100 ko01110 map00350 map00950 map01100 map01110
Pfam Domains
Protein Families
PPO1_DWL PPO1_KFDV Tyrosinase

Protein Analysis

174

Amino Acids

19.84

Weight (kDa)

5.33

Isoelectric Point (pI)

57.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 132
AccII CGCG 1 cut(s) 97
AciI CCGC 2 cut(s) 95, 132
AclWI GGATC 2 cut(s) 133, 404
AcsI RAATTY 3 cut(s) 266, 283, 323
AfaI GTAC 2 cut(s) 260, 408
AgsI TTSAA 2 cut(s) 178, 509
AloI GAACNNNNNNTCC 2 cut(s) 324, 356
AluBI AGCT 2 cut(s) 56, 150
AluI AGCT 2 cut(s) 56, 150
AlwI GGATC 2 cut(s) 133, 404
ApoI RAATTY 3 cut(s) 266, 283, 323
AspLEI GCGC 1 cut(s) 105
AsuHPI GGTGA 1 cut(s) 460
BccI CCATC 2 cut(s) 43, 488
BceAI ACGGC 1 cut(s) 370
BfaI CTAG 1 cut(s) 410
BfmI CTRYAG 1 cut(s) 500
BisI GCNGC 1 cut(s) 95
BlsI GCNGC 1 cut(s) 96
BmcAI AGTACT 1 cut(s) 408
BmiI GGNNCC 1 cut(s) 334
BmsI GCATC 1 cut(s) 355
BpuEI CTTGAG 1 cut(s) 371
BsaJI CCNNGG 1 cut(s) 461
BseDI CCNNGG 1 cut(s) 461
BseGI GGATG 3 cut(s) 35, 298, 370
BseMII CTCAG 1 cut(s) 414
Bsh1236I CGCG 1 cut(s) 97
Bsh1285I CGRYCG 1 cut(s) 136
BsiEI CGRYCG 1 cut(s) 136
Bsp143I GATC 2 cut(s) 125, 396
BspACI CCGC 2 cut(s) 95, 132
BspCNI CTCAG 1 cut(s) 413
BspFNI CGCG 1 cut(s) 97
BspLI GGNNCC 1 cut(s) 334
BspMAI CTGCAG 1 cut(s) 504
BspPI GGATC 2 cut(s) 133, 404
BsrBI CCGCTC 1 cut(s) 132
BssECI CCNNGG 1 cut(s) 461
BssMI GATC 2 cut(s) 125, 396
BssT1I CCWWGG 1 cut(s) 461
Bst4CI ACNGT 1 cut(s) 160
Bst6I CTCTTC 2 cut(s) 204, 210
BstC8I GCNNGC 2 cut(s) 54, 198
BstDEI CTNAG 2 cut(s) 65, 400
BstF5I GGATG 3 cut(s) 35, 298, 370
BstFNI CGCG 1 cut(s) 97
BstHHI GCGC 1 cut(s) 105
BstKTI GATC 2 cut(s) 128, 399
BstMBI GATC 2 cut(s) 125, 396
BstMCI CGRYCG 1 cut(s) 136
BstMWI GCNNNNNNNGC 4 cut(s) 11, 20, 100, 438
BstNSI RCATGY 1 cut(s) 52
BstSFI CTRYAG 1 cut(s) 500
BstUI CGCG 1 cut(s) 97
BstX2I RGATCY 1 cut(s) 396
BstYI RGATCY 1 cut(s) 396
BtgZI GCGATG 1 cut(s) 447
BtsCI GGATG 3 cut(s) 35, 298, 370
BtsIMutI CAGTG 1 cut(s) 325
Cac8I GCNNGC 2 cut(s) 54, 198
CfoI GCGC 1 cut(s) 105
CseI GACGC 1 cut(s) 3
Csp6I GTAC 2 cut(s) 259, 407
CviAII CATG 2 cut(s) 49, 233
CviJI RGCY 5 cut(s) 5, 23, 56, 150, 309
CviKI_1 RGCY 5 cut(s) 5, 23, 56, 150, 309
CviQI GTAC 2 cut(s) 259, 407
DdeI CTNAG 2 cut(s) 65, 400
DpnI GATC 2 cut(s) 127, 398
DpnII GATC 2 cut(s) 125, 396
Eam1104I CTCTTC 2 cut(s) 204, 210
EarI CTCTTC 2 cut(s) 204, 210
Eco130I CCWWGG 1 cut(s) 461
EcoT14I CCWWGG 1 cut(s) 461
ErhI CCWWGG 1 cut(s) 461
FaeI CATG 2 cut(s) 52, 236
FatI CATG 2 cut(s) 48, 232
Fnu4HI GCNGC 1 cut(s) 95
FokI GGATG 3 cut(s) 22, 305, 377
Fsp4HI GCNGC 1 cut(s) 95
FspBI CTAG 1 cut(s) 410
GlaI GCGC 1 cut(s) 104
GluI GCNGC 1 cut(s) 95
HgaI GACGC 1 cut(s) 3
HhaI GCGC 1 cut(s) 105
Hin1II CATG 2 cut(s) 52, 236
Hin6I GCGC 1 cut(s) 103
HinP1I GCGC 1 cut(s) 103
HphI GGTGA 1 cut(s) 460
Hpy166II GTNNAC 1 cut(s) 343
Hpy188I TCNGA 2 cut(s) 60, 403
Hpy188III TCNNGA 1 cut(s) 143
Hpy8I GTNNAC 1 cut(s) 343
HpyCH4III ACNGT 1 cut(s) 160
HpyCH4IV ACGT 1 cut(s) 261
HpyCH4V TGCA 4 cut(s) 52, 169, 477, 502
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 20, 100, 438
HpyF3I CTNAG 2 cut(s) 65, 400
HpySE526I ACGT 1 cut(s) 261
Hsp92II CATG 2 cut(s) 52, 236
HspAI GCGC 1 cut(s) 103
Kzo9I GATC 2 cut(s) 125, 396
LweI GCATC 1 cut(s) 355
MaeI CTAG 1 cut(s) 410
MaeII ACGT 1 cut(s) 261
MaeIII GTNAC 1 cut(s) 448
MalI GATC 2 cut(s) 127, 398
MbiI CCGCTC 1 cut(s) 132
MboI GATC 2 cut(s) 125, 396
MboII GAAGA 5 cut(s) 201, 218, 221, 227, 425
MflI RGATCY 1 cut(s) 396
MluCI AATT 5 cut(s) 237, 266, 283, 323, 489
MnlI CCTC 5 cut(s) 205, 211, 354, 360, 415
MseI TTAA 1 cut(s) 264
MslI CAYNNNNRTG 1 cut(s) 446
MvnI CGCG 1 cut(s) 97
MwoI GCNNNNNNNGC 4 cut(s) 11, 20, 100, 438
NdeII GATC 2 cut(s) 125, 396
NlaIII CATG 2 cut(s) 52, 236
NlaIV GGNNCC 1 cut(s) 334
NmuCI GTSAC 1 cut(s) 448
NspI RCATGY 1 cut(s) 52
PkrI GCNGC 1 cut(s) 96
PspN4I GGNNCC 1 cut(s) 334
PstI CTGCAG 1 cut(s) 504
PsuI RGATCY 1 cut(s) 396
RsaI GTAC 2 cut(s) 260, 408
RsaNI GTAC 2 cut(s) 259, 407
RseI CAYNNNNRTG 1 cut(s) 446
SaqAI TTAA 1 cut(s) 264
SatI GCNGC 1 cut(s) 95
Sau3AI GATC 2 cut(s) 125, 396
ScaI AGTACT 1 cut(s) 408
SetI ASST 8 cut(s) 58, 152, 168, 176, 222, 264, 338, 352
SfaNI GCATC 1 cut(s) 355
SfcI CTRYAG 1 cut(s) 500
SmiMI CAYNNNNRTG 1 cut(s) 446
SmlI CTYRAG 1 cut(s) 386
SmoI CTYRAG 1 cut(s) 386
Sse9I AATT 5 cut(s) 237, 266, 283, 323, 489
SsiI CCGC 2 cut(s) 95, 132
SspMI CTAG 1 cut(s) 410
StyI CCWWGG 1 cut(s) 461
TaaI ACNGT 1 cut(s) 160
TaiI ACGT 1 cut(s) 264
TaqI TCGA 2 cut(s) 128, 136
TasI AATT 5 cut(s) 237, 266, 283, 323, 489
TatI WGTACW 1 cut(s) 406
TauI GCSGC 1 cut(s) 97
Tru1I TTAA 1 cut(s) 264
Tru9I TTAA 1 cut(s) 264
TscAI CASTG 1 cut(s) 325
TseFI GTSAC 1 cut(s) 448
Tsp45I GTSAC 1 cut(s) 448
TspDTI ATGAA 1 cut(s) 221
TspRI CASTG 1 cut(s) 325
XapI RAATTY 3 cut(s) 266, 283, 323
XceI RCATGY 1 cut(s) 52
XcmI CCANNNNNNNNNTGG 1 cut(s) 388
XspI CTAG 1 cut(s) 410
ZrmI AGTACT 1 cut(s) 408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.