Rorug06G0014300

Common central domain of tyrosinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
1884869 .. 1895414
10546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0014300.1

Sequence Viewer

Length: 5703 bp
ATGGAAACTCGGAGCCGGAAGCGGGCGGAGGCCACCTCATCAGCCCCTTCATCATCAACTTCGTCTGGTCGCACCACTCGTTCCACCAAGCGCTCTCGTCTCTCCTCCTCTTCGCTCTCTTCTTCTGTTAACCCCTCACCGATCTCCACTCGCTCTCGGGCCTCTCGGGCCAACAATCAAGACACCGCCGCCGCCGTTGCAGCATCGGCCACCACCGCCATGGACTCCACCAACGAATCGTCCGGCTCGCGCGGCCGCCGCAGTAGGAATTCCGATAAGGATGATAAGGGGAAGGAGAAGGAGCACGAGGTTAGAGTCAGGGATAGGGAGAGAGAGAGGGAGAGGGAGAGGGAGAGAGAGAGGGTGTTGGATAGAGAAACGGAGAGGAACCTGGGGTTGAACATGGACGGCGGAGGGAATGGTGACGACGATGATAATGATAGCGAAGGTGGGGTTGGGATTTTGCATCAGAATTTGACTTCGGCTAGTAGTGCCCTCCAGGGGCTTCTTAGGAAGATCGGTGCCGGATTGGATGACCTGCTTCCATCTTCGGCGATGGGCTCTGCTTCGTCATCCCACCAGAGCGGAAGGCTGAAGAAGATTCTGTCTGGGTTGCGAGCTGATGGGGAAGAAGGAAAGCAGGTGGAGGCTTTGACGCAGCTGTGTGAAATGCTTTCGATTGGTACTGAGGAATCGCTCAGTACTTTTTCTGTGGATTCATTTGTGCCTGTGCTTGTGGGGTTGCTTAATCATGAGAGCAATCCTGATATTATGCTTCTGGCAGCCAGAGCACTTACTCATCTATGTGATGTGCTTCCTTCGTCCTGCGCTGCAGTTGTGCATTATGGTGCGGTTTCTATCTTCTGTGCAAGGTTGTTGACCATAGAGTACATGGACTTGGCCGAACAGTCACTGCAAGCTCTGAAGAAAATATCTCAGGAACACCCAACTGCCTGTCTACGAGCTGGTGCTCTTATGGCAGTGCTTTCTTATCTGGATTTCTTTTCCACAGGAGTCCAGCGTGTGGCATTATCAACTGCTGCGAATATGTGCAAGAAACTTCCTTCAGATGCAGCTGACTTTGTGATGGAAGCTGTCCCATTACTGACAAATCTTCTGCAATATCATGATGCTAAGGTTTTGGAGCATGCTTCTGTATGTCTGACTCGAATTGCTGAATCATTTGCATCATCGCCTGACAAACTTGACGAACTATGCAACCATGGACTAGTTGCTCAATCTGCATCCCTTATTTCTACCAGCAATTCTGGAGGTGGGCAGTCATCTCTCAGTACACCTACTTATACGGGCTTAATCCGGCTACTTTCAACCTGCGCAAGTGGTTCTCCATTAGGAGCTAAAACTTTGCTTTCTCTAGGGATAAGTGGCATTCTCAAAGATGTACTTTCGGGTTCAGGCAGTTCTTCCAACACTACAGTTTCTCCTGCTCTAAGTAGACCAGCAGAACAGATTTTTGAGATTGTCAATCTTGCAAATGAGCTGCTTCCTCCACTTCCACAAGGAACCATCTCCATGCCGTCCAGTTTCAATTTGTTTATGAAAGGACCTATTGTGAAAAAGTCATCTGGTAGCAGTTCTGGGAAGCCAGAAGATACCAGTGGAAGCGCTCCTGAGGTTTCAGCTCGTGAGAAATTATTGAACGAACAGCCTGGTCTTCTTCAGCAATTTGGAATGGATCTCCTTCCTGTTTTAATACAGATTTATGGCTCTAGTGTAAATGGCCCTGTTCGCCACAAATGTCTATCGGTCATCGGGAAGTTAATGTACTTCAGCCCTGCAGAGATGATTGAGTCTTTGTTAAGTATGACAAATATTGCAAGTTTCTTAGCCGGTGTTTTAGCATGGAAAGATCCGCATGTCTTGGTTCCTGCTCTCCAAATTGCCGAGATACTCATGGAGAAGCTTCCCAAGACTTTCTCCAAGGTGTTTGTCAGAGAAGGTGTGGTTCATGCTGTTGACCAACTTATTTTAGCTGGTACTCCGAATTCAGTTACTTCACAAGTCTCTTCTGCTGAAAAGGACAATGATTCTGTGCCGGGATCATCACGTTCTAGGCGTTATAGACGTCGCAACAGTAACTCAAATCCAGATGGAAATTCATTGGAAGAATCGAAGATTCCTGCTTCGGTAACCATTGGTTCGCCTCCAAGTTCAGTGGAGATCCCAACTGTCAACTCCAGCCTTCGTGTAGCTGTGAGTACATGTGCAAAAGCGTTTAAGGACAAGTACTTCCCTTCAGACCCTGGGGCGGGTGAAGTTGGTGTCACCGATGATCTATTACATTTAAAAAATCTGTGTGCGAAGTTGAATGCCGGTGTGGATGACCCAAAAACAAAAGCAAAGGGAAAATCAAAAGCTTCTGGGTCTCGCTTAGTTGATAGTTCTGCAAATAAGGAAGAGTATTTAATTGGTGTCGTAGCCGAGATGGTAGCCGAACTAAGCAAAGGGGATGGTGTGTCTACCTTTGAGTTCATAGGTAGTGGTGTTGTCGCAGCTTTGCTGAACTATTTTTCTTGTGGTCACTTCTCGAAGGAGAGAATTTCAGAAGCTAATTTGCCCAAGCTTCATCAACAAGCTCTCAAGAGGTTTAAGTCATTTGTTGCTGTTGCTCTTCCTTTCAGTATTGATGAAGGAAGAGTAGCCCCAATGACTATCATAGTTCAGAAACTACAAGGTGCTTTGTCCTCTTTAGAGCGGTTCCCTGTTGTGCTGAGTCATTCATCTAGGTCATCTACTGGAAGTGCACGCCTCTCCTCTGGACTTAGTGCATTATCCCAGCCCTTTAAGTTGCGTCTATGTCGAGCACAAGGAGAAAAGGCTCTCCGAGATTATTCATCAAATGTTGTACTGATTGACCCATTAGCAAGCTTAGCTGCTGTTGAAGAGTTTCTTTGGCCTCGAATTCAGCGAAGTGATTCTGGTCAGAAGGCTGCTGCATCTGCTGGAAATTCTGAATCTGGAAATACTCCTACAGGAGCTGGTGCTTCATCTCTGTCTACTTCAAATCCTGCTTCTACCAATCGTCGCCATTCAACTCGTTCCAGAACATCTGTAAATATAGGTGATGCTGCTAAGAGGGAACCTTCACAAGAGAAGAGCACGAGCTCATCTAAAGGGAAGGGTAAAGCGGTTTTGAAACCTTCTCAGGAGGAAGCAAGAGGCCCTCAAACAAGGAACGCAGCTCGCAGAAGAGCAGCTCTTGATAAAGATGTTCAAATGAAACCTGTGAATGGGGACACTACTTCTGAGGATGAGGAATTGGATGTATCTCCTGCTGAGATCGATGATGCATTGGTTATTGAAGATGATGATATCTCAGACGAAGAAGATGATGACCAGGATGATGTTCTCAGAGATGACTCTCTTCCTGTTTGCACGCCAGACAAAGTACATGATGTGAAATTGGGAGACTCTGCTGAGGATACTACTGTAGCTTCTGCAACAAGTGACAGCCAGACTAACCCTGCTTCTGGATCTAGTAGCAGAGCTGCTGCAGTTAGAGGATCAGATTCTGTTGAACACAGGAGTAGTAATTCTTATGGTTCTAAAGGTGCAATGTCGTTTGCTGCTGCAGCAATGGCTGGGCTTGGGTCGGGTAGCCGCGGTATCAGGGGAGGTAGAGACCGACAAGGACGCCCTCTTTTTGGTGGTTCGAGTGATCCTCCCAAGTTGACCTTTACATCTGGGGGAAAGCAGCTGAATCGGCATTTGACTATCTATCAGGCCATTCAGAGACAGCTTGTGTTGGATGAGGATGATGATGAGAGATATGCTGGCAGTGATCTAATGTCAAGTGATGGTAGCAGGCTGTGGAGTGATATTTACACTATCACCTACCAGAGGGCAGACAGTCAAGCTGAGAGGGCATCTGTTGGAGGGGCAAGTTCAACGCCTCCGTCGAAATCTAGCAAATCAGGTTCTTCCAATTCTAATTCCGATTCCCAATTGCATCGGATGTCACTTCTTGATAGCATTTTGCAGGGAGAACTTCCTTGTGATTTGGAAAAATCTAATCCTACATATAATATACTGGCACTACTGCGAGTACTGGAGGGCTTGAATCAGCTCGCACCCCGTTTGAGAACTCAGATAGTTTCTGACAGTTTTGCTGAGGGGAAAGTCTCAAATTTGGATGACTTGAGTACAACTGGTGCTAGGGTCATTTCTGAGGAATTTATTAACAGCAAACTCACTCCCAAATTAGCCCGACAAATACAAGATGCTCTTGCATTGTGCAGTGGCAGTCTTCCTTCGTGGTGCTATCAGTTGACTAAAGCATGCCCATTTTTGTTTCCTTTTGAGACTCGAAGACAGTATTTCTACTCAACCGCTTTTGGATTATCTCGTGCCCTGTATCGTCTTCAGCAGCAGCAGGGTGCTGATGGTCATGGATCAAACGAACGAGAGGTGAGAGTTGGAAGATTGCAACGTCAAAAAGTCCGTGTCTCTCGTAACCGGATTTTGGACTCCGCTGCAAAAGTAATGGAGATGTATTCGAGCCAGAAGTCTGTACTTGAAGTAGAATATTTTGGTGAGGTGGGCACTGGGTTGGGTCCTACACTTGAGTTCTATACACTTCTAAGTCATGACTTACAGAAAGTTAGACTTGGTATGTGGAGGTCAAATTCTTCATTGGAGAAAGCACCAATGGATATTGATGGAGATGATCAGAAAGATGGGAAAATCAATGTTGACATTGTCCAAGCTCCTCTTGGGTTGTTTCCTCGTCCCTGGCCTCCGAATGCTGCTGCTTCTGATGGTGACCAATTTTCTAAAGTTATTGAGTATTTCCGGTTGGTCGGGCGTGTAATGGCGAAGGCTCTTCAAGATGGGAGGCTATTAGACTTACCACTATCAACAGCATTTTATAAACTATTGCTTGGCCAAGAGCTTGATTTACATGATGTTCTTTCCTTTGATGCCGAGCTTGGGAAGACTTTGCAAGAATTACATAACCTTGTTAGCCGGAAACTATATCTAGAATCAAATGGTGACAATCGCGATGCAATTGCTGAATTGCGTTTCCGTGGGGCTTCAATTGATGATCTCTTCTTAGATTTTACGCTTCCTGGTTATCCGGAGTACGTGTTGAAACCCGGAGATGAAAATGTTGATATCAATAACTTGGAAGAATATATATCTTTAGTCGTTGATGCAACAGTTAAGACTGGAATAATGCGGCAGACAGAAGCATTTAGAGCGGGGTTCAATCAGGTGTTTGATATATCATCTTTACAAATATTCACCCCACATGAATTGGACTATCTGCTTTGTGGCCGTAGAGAGCTGTGGGAGACGGAGACTCTTGCTGATCACATAAAATTTGATCATGGATACACTGCGAAGAGCCCTGCAATACTTAATTTGCTTGAGATCATGGGTGAGTTCACGCCTGAGCAGCAGCGTGCCTTTTGCCAGTTTGTTACTGGTGCACCTAGGCTTCCCCCTGGTGGTTTGGCAGTGCTGAATCCAAAGCTGACTATTGTGAGAAAGCATTCTTCAACTGCAAATAATGCAGCAGCCAATGGGACTGGGGCTTCAGAATTGGCTGATGATGATCTGCCAAGTGTTATGACATGCGCTAATTACCTAAAGCTTCCTCCTTACTCTACCAAGGATATTATGTACAAGAAACTACTCTATGCAATCAATGAAGGGCAGGGATCCTTTGATTTGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1900

Amino Acids

204.53

Weight (kDa)

5.89

Isoelectric Point (pI)

45.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_TRIP12_N PF25579 190 - 321 1.4e-50 E3 ubiquitin-protein ligase TRIP12-like, TPR repeats
HECT PF00632 1586 - 1900 2.4e-79 HECT-domain (ubiquitin-transferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4890
AarI CACCTGC 1 cut(s) 631
AatII GACGTC 1 cut(s) 2089
Acc16I TGCGCA 1 cut(s) 1336
Acc36I ACCTGC 3 cut(s) 546, 631, 1340
AccB1I GGYRCC 1 cut(s) 521
AccB7I CCANNNNNTGG 1 cut(s) 1024
AccBSI CCGCTC 3 cut(s) 585, 2716, 5222
AccI GTMKAC 4 cut(s) 958, 1456, 2480, 3017
AccII CGCG 4 cut(s) 250, 252, 3624, 5022
AccIII TCCGGA 1 cut(s) 5098
AcoI YGGCCR 5 cut(s) 207, 253, 900, 4903, 5296
AcuI CTGAAG 8 cut(s) 614, 944, 1050, 1664, 1774, 2241, 4367, 5544
AcyI GRCGYC 2 cut(s) 2086, 3655
AfeI AGCGCT 2 cut(s) 92, 1627
AflIII ACRYGT 2 cut(s) 2222, 5106
AhlI ACTAGT 1 cut(s) 1228
AjnI CCWGG 8 cut(s) 390, 498, 1669, 2263, 3357, 4751, 5089, 5467
AjuI GAANNNNNNNTTGG 2 cut(s) 438, 470
Alw21I GWGCWC 8 cut(s) 306, 793, 973, 2767, 2827, 3122, 3128, 5455
Alw44I GTGCAC 2 cut(s) 2763, 5451
AlwNI CAGNNNCTG 4 cut(s) 913, 2264, 2999, 3533
Ama87I CYCGRG 2 cut(s) 156, 165
Aor13HI TCCGGA 1 cut(s) 5098
Aor51HI AGCGCT 2 cut(s) 92, 1627
ApaLI GTGCAC 2 cut(s) 2763, 5451
Asp700I GAANNNNTTC 3 cut(s) 2907, 2935, 5515
AspA2I CCTAGG 1 cut(s) 5456
AspLEI GCGC 6 cut(s) 93, 252, 830, 1337, 1628, 5603
AspS9I GGNCC 6 cut(s) 159, 168, 1565, 1742, 3182, 4574
AsuC2I CCSGG 2 cut(s) 2058, 5118
AvaI CYCGRG 2 cut(s) 156, 165
AvaII GGWCC 2 cut(s) 1565, 4574
AvrII CCTAGG 1 cut(s) 5456
AxyI CCTNAGG 1 cut(s) 1632
BaeGI GKGCMC 5 cut(s) 496, 2767, 4372, 4565, 5455
BaeI ACNNNNGTAYC 2 cut(s) 3435, 3468
BalI TGGCCA 1 cut(s) 4905
BamHI GGATCC 1 cut(s) 5684
BanI GGYRCC 1 cut(s) 521
BanII GRGCYC 3 cut(s) 563, 3128, 5372
BarI GAAGNNNNNNTAC 2 cut(s) 1769, 1801
BauI CACGAG 4 cut(s) 305, 1644, 3121, 4365
BbsI GAAGAC 5 cut(s) 1667, 4259, 4336, 4373, 4961
Bbv12I GWGCWC 8 cut(s) 306, 793, 973, 2767, 2827, 3122, 3128, 5455
BbvCI CCTCAGC 2 cut(s) 3438, 4131
BceAI ACGGC 4 cut(s) 179, 424, 1522, 5283
BcgI CGANNNNNNTGC 4 cut(s) 3704, 3738, 5012, 5046
BciT130I CCWGG 8 cut(s) 392, 500, 1671, 2265, 3359, 4753, 5091, 5469
BciVI GTATCC 2 cut(s) 3436, 5348
BclI TGATCA 3 cut(s) 4687, 5332, 5347
BcnI CCSGG 2 cut(s) 2058, 5118
BcuI ACTAGT 1 cut(s) 1228
BfmI CTRYAG 7 cut(s) 831, 1434, 1797, 2991, 3450, 3513, 3591
BfoI RGCGCY 2 cut(s) 94, 1629
BfuAI ACCTGC 3 cut(s) 546, 631, 1340
BfuI GTATCC 2 cut(s) 3436, 5348
BglI GCCNNNNNGGC 1 cut(s) 167
BlnI CCTAGG 1 cut(s) 5456
BlpI GCTNAGC 1 cut(s) 2890
BmcAI AGTACT 3 cut(s) 703, 2249, 4068
Bme18I GGWCC 2 cut(s) 1565, 4574
BmeT110I CYCGRG 2 cut(s) 156, 165
BmgT120I GGNCC 6 cut(s) 159, 168, 1565, 1742, 3182, 4574
BmiI GGNNCC 9 cut(s) 14, 389, 523, 1525, 1887, 2720, 3102, 4575, 5686
BmrI ACTGGG 2 cut(s) 4575, 5562
BmuI ACTGGG 2 cut(s) 4575, 5562
BpiI GAAGAC 5 cut(s) 1667, 4259, 4336, 4373, 4961
BplI GAGNNNNNCTC 4 cut(s) 20, 52, 3667, 3699
BpmI CTGGAG 4 cut(s) 482, 1290, 2182, 4091
Bpu10I CCTNAGC 4 cut(s) 1134, 3438, 4131, 5415
Bpu1102I GCTNAGC 1 cut(s) 2890
BpuEI CTTGAG 4 cut(s) 2585, 4180, 4604, 5411
BpuMI CCSGG 2 cut(s) 2058, 5118
Bsa29I ATCGAT 1 cut(s) 3303
BsaAI YACGTR 1 cut(s) 5107
BsaBI GATNNNNATC 1 cut(s) 5577
BsaHI GRCGYC 2 cut(s) 2086, 3655
BsaI GGTCTC 2 cut(s) 2391, 3636
BsaWI WCCGGW 3 cut(s) 4476, 4812, 5098
BsaXI ACNNNNNCTCC 4 cut(s) 1426, 1456, 5093, 5123
Bse118I RCCGGY 2 cut(s) 1850, 2333
Bse21I CCTNAGG 1 cut(s) 1632
Bse3DI GCAATG 2 cut(s) 3582, 3603
Bse8I GATNNNNATC 1 cut(s) 5577
BseAI TCCGGA 1 cut(s) 5098
BseBI CCWGG 8 cut(s) 392, 500, 1671, 2265, 3359, 4753, 5091, 5469
BseCI ATCGAT 1 cut(s) 3303
BseJI GATNNNNATC 1 cut(s) 5577
BseMI GCAATG 2 cut(s) 3582, 3603
BseRI GAGGAG 4 cut(s) 94, 97, 2764, 4719
BseSI GKGCMC 5 cut(s) 496, 2767, 4372, 4565, 5455
BseX3I CGGCCG 1 cut(s) 253
BseYI CCCAGC 2 cut(s) 2796, 3602
BsgI GTGCAG 1 cut(s) 4276
Bsh1236I CGCG 4 cut(s) 250, 252, 3624, 5022
Bsh1285I CGRYCG 1 cut(s) 256
BshNI GGYRCC 1 cut(s) 521
BshVI ATCGAT 1 cut(s) 3303
BsiEI CGRYCG 1 cut(s) 256
BsiHKAI GWGCWC 8 cut(s) 306, 793, 973, 2767, 2827, 3122, 3128, 5455
BsiHKCI CYCGRG 2 cut(s) 156, 165
BslFI GGGAC 4 cut(s) 1082, 3269, 4734, 5563
BsmBI CGTCTC 2 cut(s) 104, 5309
BsmFI GGGAC 4 cut(s) 1082, 3269, 4734, 5563
BsmI GAATGC 4 cut(s) 1389, 2335, 4768, 5515
Bso31I GGTCTC 2 cut(s) 2391, 3636
BsoBI CYCGRG 2 cut(s) 156, 165
Bsp13I TCCGGA 1 cut(s) 5098
Bsp1407I TGTACA 1 cut(s) 5646
Bsp1720I GCTNAGC 1 cut(s) 2890
Bsp19I CCATGG 2 cut(s) 219, 1222
Bsp68I TCGCGA 1 cut(s) 5022
BspDI ATCGAT 1 cut(s) 3303
BspEI TCCGGA 1 cut(s) 5098
BspFNI CGCG 4 cut(s) 250, 252, 3624, 5022
BspHI TCATGA 4 cut(s) 751, 1126, 4606, 5699
BspLI GGNNCC 9 cut(s) 14, 389, 523, 1525, 1887, 2720, 3102, 4575, 5686
BspMAI CTGCAG 4 cut(s) 835, 1801, 3517, 3595
BspMI ACCTGC 3 cut(s) 546, 631, 1340
BspQI GCTCTTC 5 cut(s) 2637, 3110, 3205, 4848, 5360
BspT107I GGYRCC 1 cut(s) 521
BspTNI GGTCTC 2 cut(s) 2391, 3636
BsrBI CCGCTC 3 cut(s) 585, 2716, 5222
BsrDI GCAATG 2 cut(s) 3582, 3603
BsrFI RCCGGY 2 cut(s) 1850, 2333
BsrGI TGTACA 1 cut(s) 5646
BssAI RCCGGY 2 cut(s) 1850, 2333
BssNI GRCGYC 2 cut(s) 2086, 3655
BssSI CACGAG 4 cut(s) 305, 1644, 3121, 4365
BssT1I CCWWGG 5 cut(s) 219, 1222, 1941, 5456, 5634
Bst2BI CACGAG 4 cut(s) 305, 1644, 3121, 4365
Bst2UI CCWGG 8 cut(s) 392, 500, 1671, 2265, 3359, 4753, 5091, 5469
Bst4CI ACNGT 9 cut(s) 909, 1438, 2096, 2191, 3451, 3872, 4124, 4335, 5182
BstACI GRCGYC 2 cut(s) 2086, 3655
BstAPI GCANNNNNTGC 1 cut(s) 5534
BstAUI TGTACA 1 cut(s) 5646
BstBAI YACGTR 1 cut(s) 5107
BstDSI CCRYGG 4 cut(s) 219, 1222, 3622, 5047
BstEII GGTNACC 2 cut(s) 2149, 4781
BstENI CCTNNNNNAGG 1 cut(s) 3859
BstFNI CGCG 4 cut(s) 250, 252, 3624, 5022
BstH2I RGCGCY 2 cut(s) 94, 1629
BstHHI GCGC 6 cut(s) 93, 252, 830, 1337, 1628, 5603
BstMCI CGRYCG 1 cut(s) 256
BstNI CCWGG 8 cut(s) 392, 500, 1671, 2265, 3359, 4753, 5091, 5469
BstNSI RCATGY 5 cut(s) 1151, 1880, 2226, 4302, 5601
BstPI GGTNACC 2 cut(s) 2149, 4781
BstSFI CTRYAG 7 cut(s) 831, 1434, 1797, 2991, 3450, 3513, 3591
BstSLI GKGCMC 5 cut(s) 496, 2767, 4372, 4565, 5455
BstUI CGCG 4 cut(s) 250, 252, 3624, 5022
BstV2I GAAGAC 5 cut(s) 1667, 4259, 4336, 4373, 4961
BstX2I RGATCY 5 cut(s) 1696, 1870, 2181, 3494, 5684
BstXI CCANNNNNNTGG 1 cut(s) 220
BstYI RGATCY 5 cut(s) 1696, 1870, 2181, 3494, 5684
BstZI CGGCCG 1 cut(s) 253
Bsu15I ATCGAT 1 cut(s) 3303
Bsu36I CCTNAGG 1 cut(s) 1632
BsuI GTATCC 2 cut(s) 3436, 5348
BsuTUI ATCGAT 1 cut(s) 3303
BtgI CCRYGG 4 cut(s) 219, 1222, 3622, 5047
BtgZI GCGATG 3 cut(s) 569, 1176, 5037
BtsI GCAGTG 6 cut(s) 911, 987, 3805, 4264, 5358, 5487
BtsIMutI CAGTG 9 cut(s) 911, 987, 1624, 2181, 3805, 4264, 4563, 5358, 5487
BtuMI TCGCGA 1 cut(s) 5022
BveI ACCTGC 3 cut(s) 546, 631, 1340
CaiI CAGNNNCTG 4 cut(s) 913, 2264, 2999, 3533
CciI TCATGA 4 cut(s) 751, 1126, 4606, 5699
CciNI GCGGCCGC 1 cut(s) 253
CfoI GCGC 6 cut(s) 93, 252, 830, 1337, 1628, 5603
Cfr10I RCCGGY 2 cut(s) 1850, 2333
Cfr13I GGNCC 6 cut(s) 159, 168, 1565, 1742, 3182, 4574
Cfr42I CCGCGG 1 cut(s) 3625
ClaI ATCGAT 1 cut(s) 3303
CseI GACGC 3 cut(s) 664, 2801, 3663
CspCI CAANNNNNGTGG 4 cut(s) 2157, 2192, 5259, 5294
DraI TTTAAA 1 cut(s) 2307
EaeI YGGCCR 5 cut(s) 207, 253, 900, 4903, 5296
EagI CGGCCG 1 cut(s) 253
EciI GGCGGA 2 cut(s) 41, 426
Ecl136II GAGCTC 1 cut(s) 3126
EclXI CGGCCG 1 cut(s) 253
Eco130I CCWWGG 5 cut(s) 219, 1222, 1941, 5456, 5634
Eco24I GRGCYC 3 cut(s) 563, 3128, 5372
Eco31I GGTCTC 2 cut(s) 2391, 3636
Eco32I GATATC 2 cut(s) 3334, 5137
Eco47I GGWCC 2 cut(s) 1565, 4574
Eco47III AGCGCT 2 cut(s) 92, 1627
Eco52I CGGCCG 1 cut(s) 253
Eco53kI GAGCTC 1 cut(s) 3126
Eco57I CTGAAG 8 cut(s) 614, 944, 1050, 1664, 1774, 2241, 4367, 5544
Eco81I CCTNAGG 1 cut(s) 1632
Eco88I CYCGRG 2 cut(s) 156, 165
Eco91I GGTNACC 2 cut(s) 2149, 4781
EcoICRI GAGCTC 1 cut(s) 3126
EcoNI CCTNNNNNAGG 1 cut(s) 3859
EcoO109I RGGNCCY 3 cut(s) 1565, 3182, 4574
EcoO65I GGTNACC 2 cut(s) 2149, 4781
EcoRI GAATTC 3 cut(s) 268, 2005, 2922
EcoRII CCWGG 8 cut(s) 390, 498, 1669, 2263, 3357, 4751, 5089, 5467
EcoRV GATATC 2 cut(s) 3334, 5137
EcoT14I CCWWGG 5 cut(s) 219, 1222, 1941, 5456, 5634
EcoT22I ATGCAT 1 cut(s) 3313
EcoT38I GRGCYC 3 cut(s) 563, 3128, 5372
ErhI CCWWGG 5 cut(s) 219, 1222, 1941, 5456, 5634
Esp3I CGTCTC 2 cut(s) 104, 5309
FaqI GGGAC 4 cut(s) 1082, 3269, 4734, 5563
FauI CCCGC 3 cut(s) 15, 2263, 5215
FbaI TGATCA 3 cut(s) 4687, 5332, 5347
FblI GTMKAC 4 cut(s) 958, 1456, 2480, 3017
FriOI GRGCYC 3 cut(s) 563, 3128, 5372
FspI TGCGCA 1 cut(s) 1336
GlaI GCGC 6 cut(s) 92, 251, 829, 1336, 1627, 5602
GsaI CCCAGC 2 cut(s) 2800, 3606
GsuI CTGGAG 4 cut(s) 482, 1290, 2182, 4091
HaeII RGCGCY 2 cut(s) 94, 1629
HgaI GACGC 3 cut(s) 664, 2801, 3663
HhaI GCGC 6 cut(s) 93, 252, 830, 1337, 1628, 5603
Hin1I GRCGYC 2 cut(s) 2086, 3655
Hin6I GCGC 6 cut(s) 91, 250, 828, 1335, 1626, 5601
HinP1I GCGC 6 cut(s) 91, 250, 828, 1335, 1626, 5601
HincII GTYRAC 7 cut(s) 130, 879, 1978, 2194, 3693, 4290, 4714
HindII GTYRAC 7 cut(s) 130, 879, 1978, 2194, 3693, 4290, 4714
HindIII AAGCTT 5 cut(s) 1922, 2376, 2582, 2887, 5615
HpaI GTTAAC 1 cut(s) 130
Hpy99I CGWCG 4 cut(s) 431, 2091, 3048, 3922
HpyCH4III ACNGT 9 cut(s) 909, 1438, 2096, 2191, 3451, 3872, 4124, 4335, 5182
HpyCH4IV ACGT 4 cut(s) 2068, 2086, 4450, 5106
HpySE526I ACGT 4 cut(s) 2068, 2086, 4450, 5106
Hsp92I GRCGYC 2 cut(s) 2086, 3655
HspAI GCGC 6 cut(s) 91, 250, 828, 1335, 1626, 5601
Kpn2I TCCGGA 1 cut(s) 5098
Ksp22I TGATCA 3 cut(s) 4687, 5332, 5347
KspAI GTTAAC 1 cut(s) 130
KspI CCGCGG 1 cut(s) 3625
LguI GCTCTTC 5 cut(s) 2637, 3110, 3205, 4848, 5360
LmnI GCTCC 7 cut(s) 12, 301, 1144, 1355, 1633, 2996, 4732
MaeII ACGT 4 cut(s) 2068, 2086, 4450, 5106
MbiI CCGCTC 3 cut(s) 585, 2716, 5222
MfeI CAATTG 3 cut(s) 3965, 5028, 5058
MflI RGATCY 5 cut(s) 1696, 1870, 2181, 3494, 5684
MlsI TGGCCA 1 cut(s) 4905
MluNI TGGCCA 1 cut(s) 4905
MmeI TCCRAC 5 cut(s) 348, 1452, 3747, 3874, 4417
Mox20I TGGCCA 1 cut(s) 4905
Mph1103I ATGCAT 1 cut(s) 3313
MroI TCCGGA 1 cut(s) 5098
MroXI GAANNNNTTC 3 cut(s) 2907, 2935, 5515
MscI TGGCCA 1 cut(s) 4905
MslI CAYNNNNRTG 4 cut(s) 218, 804, 846, 1532
Msp20I TGGCCA 1 cut(s) 4905
MspA1I CMGCKG 5 cut(s) 661, 1076, 3624, 3718, 4493
MunI CAATTG 3 cut(s) 3965, 5028, 5058
Mva1269I GAATGC 4 cut(s) 1389, 2335, 4768, 5515
MvaI CCWGG 8 cut(s) 392, 500, 1671, 2265, 3359, 4753, 5091, 5469
MvnI CGCG 4 cut(s) 250, 252, 3624, 5022
NciI CCSGG 2 cut(s) 2058, 5118
NcoI CCATGG 2 cut(s) 219, 1222
NlaIV GGNNCC 9 cut(s) 14, 389, 523, 1525, 1887, 2720, 3102, 4575, 5686
NmeAIII GCCGAG 3 cut(s) 1930, 2467, 4969
NmuCI GTSAC 8 cut(s) 422, 909, 2284, 2540, 3467, 3978, 4781, 5012
NotI GCGGCCGC 1 cut(s) 253
NruI TCGCGA 1 cut(s) 5022
NsbI TGCGCA 1 cut(s) 1336
NsiI ATGCAT 1 cut(s) 3313
NspI RCATGY 5 cut(s) 1151, 1880, 2226, 4302, 5601
PaeI GCATGC 2 cut(s) 1151, 4302
PagI TCATGA 4 cut(s) 751, 1126, 4606, 5699
PaqCI CACCTGC 1 cut(s) 631
PasI CCCWGGG 1 cut(s) 2264
PciI ACATGT 1 cut(s) 2222
PciSI GCTCTTC 5 cut(s) 2637, 3110, 3205, 4848, 5360
PcsI WCGNNNNNNNCGW 4 cut(s) 76, 2074, 2926, 3917
PctI GAATGC 4 cut(s) 1389, 2335, 4768, 5515
PdmI GAANNNNTTC 3 cut(s) 2907, 2935, 5515
PflFI GACNNNGTC 1 cut(s) 4718
PflMI CCANNNNNTGG 1 cut(s) 1024
Ppu21I YACGTR 1 cut(s) 5107
PpuMI RGGWCCY 2 cut(s) 1565, 4574
PscI ACATGT 1 cut(s) 2222
PsiI TTATAA 1 cut(s) 4890
Psp124BI GAGCTC 1 cut(s) 3128
Psp5II RGGWCCY 2 cut(s) 1565, 4574
Psp6I CCWGG 8 cut(s) 390, 498, 1669, 2263, 3357, 4751, 5089, 5467
PspEI GGTNACC 2 cut(s) 2149, 4781
PspFI CCCAGC 2 cut(s) 2796, 3602
PspGI CCWGG 8 cut(s) 390, 498, 1669, 2263, 3357, 4751, 5089, 5467
PspN4I GGNNCC 9 cut(s) 14, 389, 523, 1525, 1887, 2720, 3102, 4575, 5686
PspPI GGNCC 6 cut(s) 159, 168, 1565, 1742, 3182, 4574
PspPPI RGGWCCY 2 cut(s) 1565, 4574
PstI CTGCAG 4 cut(s) 835, 1801, 3517, 3595
PstNI CAGNNNCTG 4 cut(s) 913, 2264, 2999, 3533
PsuI RGATCY 5 cut(s) 1696, 1870, 2181, 3494, 5684
PsyI GACNNNGTC 1 cut(s) 4718
PvuII CAGCTG 3 cut(s) 661, 1076, 3718
RruI TCGCGA 1 cut(s) 5022
RseI CAYNNNNRTG 4 cut(s) 218, 804, 846, 1532
SacI GAGCTC 1 cut(s) 3128
SacII CCGCGG 1 cut(s) 3625
SapI GCTCTTC 5 cut(s) 2637, 3110, 3205, 4848, 5360
Sau96I GGNCC 6 cut(s) 159, 168, 1565, 1742, 3182, 4574
ScaI AGTACT 3 cut(s) 703, 2249, 4068
SfcI CTRYAG 7 cut(s) 831, 1434, 1797, 2991, 3450, 3513, 3591
SfiI GGCCNNNNNGGCC 1 cut(s) 167
Sfr303I CCGCGG 1 cut(s) 3625
SgrBI CCGCGG 1 cut(s) 3625
SinI GGWCC 2 cut(s) 1565, 4574
SmiMI CAYNNNNRTG 4 cut(s) 218, 804, 846, 1532
SmlI CTYRAG 4 cut(s) 2600, 4159, 4583, 5390
SmoI CTYRAG 4 cut(s) 2600, 4159, 4583, 5390
SpeI ACTAGT 1 cut(s) 1228
SphI GCATGC 2 cut(s) 1151, 4302
SspI AATATT 3 cut(s) 1834, 4547, 5262
SstI GAGCTC 1 cut(s) 3128
StyI CCWWGG 5 cut(s) 219, 1222, 1941, 5456, 5634
TaaI ACNGT 9 cut(s) 909, 1438, 2096, 2191, 3451, 3872, 4124, 4335, 5182
TaiI ACGT 4 cut(s) 2071, 2089, 4453, 5109
TaqII GACCGA 2 cut(s) 1756, 3660
TauI GCSGC 7 cut(s) 191, 194, 255, 258, 261, 3624, 5203
TscAI CASTG 9 cut(s) 918, 987, 1624, 2181, 3805, 4264, 4570, 5365, 5487
TseFI GTSAC 8 cut(s) 422, 909, 2284, 2540, 3467, 3978, 4781, 5012
Tsp45I GTSAC 8 cut(s) 422, 909, 2284, 2540, 3467, 3978, 4781, 5012
TspGWI ACGGA 5 cut(s) 395, 3906, 4451, 5036, 5333
TspRI CASTG 9 cut(s) 918, 987, 1624, 2181, 3805, 4264, 4570, 5365, 5487
Tth111I GACNNNGTC 1 cut(s) 4718
Van91I CCANNNNNTGG 1 cut(s) 1024
VneI GTGCAC 2 cut(s) 2763, 5451
VpaK11BI GGWCC 2 cut(s) 1565, 4574
XagI CCTNNNNNAGG 1 cut(s) 3859
XbaI TCTAGA 1 cut(s) 4999
XceI RCATGY 5 cut(s) 1151, 1880, 2226, 4302, 5601
XcmI CCANNNNNNNNNTGG 4 cut(s) 217, 889, 4730, 5444
XmaJI CCTAGG 1 cut(s) 5456
XmiI GTMKAC 4 cut(s) 958, 1456, 2480, 3017
XmnI GAANNNNTTC 3 cut(s) 2907, 2935, 5515
ZraI GACGTC 1 cut(s) 2087
ZrmI AGTACT 3 cut(s) 703, 2249, 4068
Zsp2I ATGCAT 1 cut(s) 3313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.