Rmu_sc0002934.1_g000059

Common central domain of tyrosinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002934.1
OG0000836
Physical Location & Seq
Forward (+)
243917 .. 247398
3482 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002934.1_g000059.1.cds

Sequence Viewer

Length: 519 bp
atggatgcagcaaagaaatggggtttcgctgttaccttgatattcatcatgtttgcagtattgcgtctgactcttctggtcctcagagatcctaatgaatcttggaaacttatggacacagtcctaggcgtattaggaatagttgactcagatgagtcttcagtaggctacaagattgataaagaggacctttcagtaagtctcaacttaacaagttgtcactcatcttatggaaggccagatcttcttgtctattgttgtcctccaagaagtatagcagaagaacccgtcattgattttcaatttccagatccttcaacccctctaagaattcggaggccagcacaccgtgttggtcgtggcttcattgccaagtacaaaaaggctctcttaatcatgaagtcacttccctacagtgaccctcggagttttcgtcgccaagctgatatgcattgcatcttctgcactggtgcttatgaccagccacattcccaccgccctctcgacatccatcggaaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00350 ko00950 ko01100 ko01110 map00350 map00950 map01100 map01110
Pfam Domains
Protein Families
PPO1_DWL PPO1_KFDV Tyrosinase

Protein Analysis

173

Amino Acids

19.71

Weight (kDa)

9.01

Isoelectric Point (pI)

46.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 496
AclWI GGATC 2 cut(s) 83, 305
AcsI RAATTY 1 cut(s) 330
AcuI CTGAAG 1 cut(s) 144
AdeI CACNNNGTG 1 cut(s) 350
AfaI GTAC 1 cut(s) 377
AgsI TTSAA 2 cut(s) 302, 318
AluBI AGCT 1 cut(s) 443
AluI AGCT 1 cut(s) 443
Alw26I GTCTC 1 cut(s) 206
AlwI GGATC 2 cut(s) 83, 305
AoxI GGCC 2 cut(s) 236, 338
ApeKI GCWGC 1 cut(s) 8
ApoI RAATTY 1 cut(s) 330
AspA2I CCTAGG 1 cut(s) 124
AspS9I GGNCC 2 cut(s) 79, 187
AvaII GGWCC 2 cut(s) 79, 187
AvrII CCTAGG 1 cut(s) 124
BbsI GAAGAC 1 cut(s) 150
BbvI GCAGC 1 cut(s) 20
BcoDI GTCTC 1 cut(s) 206
BfaI CTAG 1 cut(s) 125
BfmI CTRYAG 1 cut(s) 412
BglII AGATCT 1 cut(s) 241
BisI GCNGC 1 cut(s) 9
BlnI CCTAGG 1 cut(s) 124
BlsI GCNGC 1 cut(s) 10
Bme18I GGWCC 2 cut(s) 79, 187
BmgT120I GGNCC 2 cut(s) 79, 187
BmsI GCATC 1 cut(s) 465
BpiI GAAGAC 1 cut(s) 150
BsaBI GATNNNNATC 1 cut(s) 44
BsaJI CCNNGG 2 cut(s) 124, 422
BsaXI ACNNNNNCTCC 2 cut(s) 418, 448
Bse1I ACTGG 1 cut(s) 472
Bse3DI GCAATG 2 cut(s) 366, 451
Bse8I GATNNNNATC 1 cut(s) 44
BseDI CCNNGG 2 cut(s) 124, 422
BseGI GGATG 2 cut(s) 10, 507
BseJI GATNNNNATC 1 cut(s) 44
BseMI GCAATG 2 cut(s) 366, 451
BseMII CTCAG 2 cut(s) 97, 162
BseNI ACTGG 1 cut(s) 472
BseXI GCAGC 1 cut(s) 20
BsgI GTGCAG 1 cut(s) 448
BshFI GGCC 2 cut(s) 238, 340
BsmAI GTCTC 1 cut(s) 206
BsnI GGCC 2 cut(s) 238, 340
Bsp143I GATC 3 cut(s) 88, 241, 310
BspACI CCGC 1 cut(s) 496
BspANI GGCC 2 cut(s) 238, 340
BspCNI CTCAG 2 cut(s) 96, 161
BspHI TCATGA 1 cut(s) 396
BspPI GGATC 2 cut(s) 83, 305
BsrDI GCAATG 2 cut(s) 366, 451
BsrI ACTGG 1 cut(s) 472
BssECI CCNNGG 2 cut(s) 124, 422
BssMI GATC 3 cut(s) 88, 241, 310
BssT1I CCWWGG 1 cut(s) 124
Bst4CI ACNGT 3 cut(s) 121, 350, 416
Bst6I CTCTTC 1 cut(s) 78
BstAPI GCANNNNNTGC 1 cut(s) 462
BstC8I GCNNGC 1 cut(s) 342
BstDEI CTNAG 3 cut(s) 83, 148, 326
BstF5I GGATG 2 cut(s) 10, 507
BstKTI GATC 3 cut(s) 91, 244, 313
BstMAI GTCTC 1 cut(s) 206
BstMBI GATC 3 cut(s) 88, 241, 310
BstMWI GCNNNNNNNGC 1 cut(s) 462
BstSFI CTRYAG 1 cut(s) 412
BstV1I GCAGC 1 cut(s) 20
BstV2I GAAGAC 1 cut(s) 150
BstX2I RGATCY 3 cut(s) 88, 241, 310
BstYI RGATCY 3 cut(s) 88, 241, 310
BsuRI GGCC 2 cut(s) 238, 340
BtsCI GGATG 2 cut(s) 10, 507
BtsIMutI CAGTG 2 cut(s) 421, 465
Cac8I GCNNGC 1 cut(s) 342
CciI TCATGA 1 cut(s) 396
Cfr13I GGNCC 2 cut(s) 79, 187
CseI GACGC 1 cut(s) 53
Csp6I GTAC 1 cut(s) 376
CviAII CATG 2 cut(s) 49, 397
CviJI RGCY 7 cut(s) 168, 238, 340, 363, 386, 443, 484
CviKI_1 RGCY 7 cut(s) 168, 238, 340, 363, 386, 443, 484
CviQI GTAC 1 cut(s) 376
DdeI CTNAG 3 cut(s) 83, 148, 326
DpnI GATC 3 cut(s) 90, 243, 312
DpnII GATC 3 cut(s) 88, 241, 310
DraIII CACNNNGTG 1 cut(s) 350
Eam1104I CTCTTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 78
Eco130I CCWWGG 1 cut(s) 124
Eco47I GGWCC 2 cut(s) 79, 187
Eco57I CTGAAG 1 cut(s) 144
EcoO109I RGGNCCY 1 cut(s) 187
EcoRI GAATTC 1 cut(s) 330
EcoT14I CCWWGG 1 cut(s) 124
EcoT22I ATGCAT 1 cut(s) 453
ErhI CCWWGG 1 cut(s) 124
FaeI CATG 2 cut(s) 52, 400
FaiI YATR 7 cut(s) 50, 113, 231, 275, 398, 449, 477
FalI AAGNNNNNCTT 4 cut(s) 174, 206, 374, 406
FatI CATG 2 cut(s) 48, 396
Fnu4HI GCNGC 1 cut(s) 9
FokI GGATG 2 cut(s) 17, 494
Fsp4HI GCNGC 1 cut(s) 9
FspBI CTAG 1 cut(s) 125
GluI GCNGC 1 cut(s) 9
HaeIII GGCC 2 cut(s) 238, 340
HgaI GACGC 1 cut(s) 53
Hin1II CATG 2 cut(s) 52, 400
HincII GTYRAC 1 cut(s) 145
HindII GTYRAC 1 cut(s) 145
HinfI GANTC 4 cut(s) 70, 98, 146, 155
Hpy166II GTNNAC 1 cut(s) 145
Hpy188I TCNGA 6 cut(s) 69, 86, 151, 336, 426, 516
Hpy188III TCNNGA 3 cut(s) 308, 397, 503
Hpy8I GTNNAC 1 cut(s) 145
Hpy99I CGWCG 1 cut(s) 438
HpyAV CCTTC 2 cut(s) 228, 324
HpyCH4III ACNGT 3 cut(s) 121, 350, 416
HpyCH4V TGCA 5 cut(s) 8, 56, 451, 456, 465
HpyF10VI GCNNNNNNNGC 1 cut(s) 462
HpyF3I CTNAG 3 cut(s) 83, 148, 326
Hsp92II CATG 2 cut(s) 52, 400
Kzo9I GATC 3 cut(s) 88, 241, 310
LpnPI CCDG 6 cut(s) 62, 252, 321, 354, 453, 494
Lsp1109I GCAGC 1 cut(s) 20
LweI GCATC 1 cut(s) 465
MaeI CTAG 1 cut(s) 125
MaeIII GTNAC 4 cut(s) 31, 218, 402, 416
MalI GATC 3 cut(s) 90, 243, 312
MboI GATC 3 cut(s) 88, 241, 310
MboII GAAGA 5 cut(s) 65, 150, 236, 293, 451
MflI RGATCY 3 cut(s) 88, 241, 310
MluCI AATT 2 cut(s) 302, 330
MlyI GAGTC 3 cut(s) 64, 140, 164
MnlI CCTC 7 cut(s) 92, 178, 273, 330, 333, 432, 510
Mph1103I ATGCAT 1 cut(s) 453
MseI TTAA 2 cut(s) 209, 392
MwoI GCNNNNNNNGC 1 cut(s) 462
NdeII GATC 3 cut(s) 88, 241, 310
NlaIII CATG 2 cut(s) 52, 400
NmuCI GTSAC 3 cut(s) 218, 402, 416
NsiI ATGCAT 1 cut(s) 453
PagI TCATGA 1 cut(s) 396
PcsI WCGNNNNNNNCGW 1 cut(s) 430
PfeI GAWTC 1 cut(s) 98
PflFI GACNNNGTC 1 cut(s) 119
PkrI GCNGC 1 cut(s) 10
PleI GAGTC 3 cut(s) 64, 140, 163
PpsI GAGTC 3 cut(s) 64, 140, 163
PpuMI RGGWCCY 1 cut(s) 187
Psp5II RGGWCCY 1 cut(s) 187
PspPI GGNCC 2 cut(s) 79, 187
PspPPI RGGWCCY 1 cut(s) 187
PsuI RGATCY 3 cut(s) 88, 241, 310
PsyI GACNNNGTC 1 cut(s) 119
RsaI GTAC 1 cut(s) 377
RsaNI GTAC 1 cut(s) 376
SaqAI TTAA 2 cut(s) 209, 392
SatI GCNGC 1 cut(s) 9
Sau3AI GATC 3 cut(s) 88, 241, 310
Sau96I GGNCC 2 cut(s) 79, 187
SchI GAGTC 3 cut(s) 64, 140, 164
SetI ASST 3 cut(s) 38, 192, 445
SfaNI GCATC 1 cut(s) 465
SfcI CTRYAG 1 cut(s) 412
SinI GGWCC 2 cut(s) 79, 187
Sse9I AATT 2 cut(s) 302, 330
SsiI CCGC 1 cut(s) 496
SspMI CTAG 1 cut(s) 125
StyI CCWWGG 1 cut(s) 124
TaaI ACNGT 3 cut(s) 121, 350, 416
TaqI TCGA 1 cut(s) 504
TasI AATT 2 cut(s) 302, 330
TatI WGTACW 1 cut(s) 375
TfiI GAWTC 1 cut(s) 98
Tru1I TTAA 2 cut(s) 209, 392
Tru9I TTAA 2 cut(s) 209, 392
TscAI CASTG 2 cut(s) 421, 472
TseFI GTSAC 3 cut(s) 218, 402, 416
TseI GCWGC 1 cut(s) 8
Tsp45I GTSAC 3 cut(s) 218, 402, 416
TspDTI ATGAA 4 cut(s) 34, 111, 355, 413
TspRI CASTG 2 cut(s) 421, 472
Tth111I GACNNNGTC 1 cut(s) 119
VpaK11BI GGWCC 2 cut(s) 79, 187
XapI RAATTY 1 cut(s) 330
XmaJI CCTAGG 1 cut(s) 124
XspI CTAG 1 cut(s) 125
Zsp2I ATGCAT 1 cut(s) 453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.