Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0000836

Physical Location & Seq

Genomic Coordinates Reverse (-)

4890347 .. 4892619

Gene Structure 2273 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG064200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGCTTCTCTGTCACCTCCACTAGTCACCACCTCAAGTACCATTCCCAGTACTACAACTTCTCTGTCTTCCTTCTGTCAAAAGAATTCCCAAATTTCCTTAATTGGAAAACCCAGGCATTCCTATGCACGCAGTAGAGTCTCATGCAAAGCCACAAACAGTGACCAAAAGCCGTCCAACAACTCCGACGATGCAAAACCTTTGGGCAAAACCGTAGACAGGAGAAATGTGCTTCTCGGTCTCGGAGGTCTGTATGGCGTGGCTGGTCTTGGCACTGACCCTTTTGCCTTTGCCAAGCCTGTGGCTCCTCCTGATGTCTCCAAGTGTGGGGCCGCAGACTTGCCTACAGGTGCACAACCAACTGATTGTTGCCCACCGATAGCCAAAAAGATAATCGATTTCCAGCTCCCACCACAGTATAAACTCCGCGTCAGGCCAGCGGCTCACGCCGTTGACAAAGCCTACATTGAGAAATACTCCAAGGCCATCGAGCTCATGAAAGCTCTCCCCGATGACGATCCACGTAGCTTCAAGCAACAAGCCAACGTTCACTGTGCTTATTGTGACGGAGCTTACGACCAAGCTGGCTTTCCAGATCTCGAGCTCCAAATCCACGGATCATGGCTATTCTTTCCCTTCCACCGATACTACTTGTACTTCTACGAGAGAATCCTAGGCAAGCTCATCAATGACCCCACGTTTGCCTTGCCTTTCTGGAACTGGGATGCTCCTGCTGGCATGCAGCTCCCTGGCTTGTTTGCCAATCCAAAGTCGCCGCTCTATGACAAGTTCCGAAATGCCAACCACCAGCCGCCGAGGCTCATTGACCTCAACTACAATCTTAAGGATGAAAACGTCTCCAACGAAACTCAAATCAACACCAACCTCAAGATCATGTACAGGCAAATGGTGTCCAACGCCAAGAACCCTAAGCTGTTCTTTGGAAGCCCTTACAGGGCAGGGGACGAGCCTAGCCCCGGAGGTGGATCAATAGAGACTACTCCACATGGACCGGTCCACATTTGGACCGGCGACAACACCCAGCCGAATCTTGAGGACATGGGAAACTTCTACTCTGCCGGTAGAGACCCTATATTTTTCTCTCACCACTCTAACGTTGACCGTTTGTGGAGCCTGTGGAAGACCCTAGGAGGCAAAAGAGCGGATTTCACAGACTCTGATTGGTTGGACTCCGGGTTTTTGTTCTATGATGAGAACGCGAATATGGTGCGAGTGAAGGTACGTGACTGCCTCGATTCCAAGAAGCTAGGATATGTGTACCAAGACGTAGACATCCCATGGGTAAGCCACAAGCCGACTCCTCGCCGTGTCAAGGATGCCATAAAGAAATTAGGTCACAAGCTCCATGGTGTGGCTCACGCCGCGGAGACTTCCACCAAGGTAGTGGCAGGGGCTCATTTTCCGATAAGCTTGGCGTCAAAGATTAGTATTGCAGTGGCCAGGCCACAACAGAAGAAGAGGAGCCAGAAGGAGAAGGACCACGAGGAGGAGGTATTGGTGATTGAAGGGATTGAGTTTGACAGAGACGTGGGGGTGAAGTTTGATGTGTATGTGAACGATGAGGATGACTTGCCGAGTGGACCGGAGAAGAGTGAGTTTGCTGGGAGCTTTGTGAGTGTGCCGCACAGGCATAAGCATACCAAGAAGATTAACACTATCTTGAGGTTAGGTTTGACAGATTTGCTGGAGGATTTGGAAGCCGAGGACGATGAGACTGTCGTGGTGACTTTGATTCCAAGGTATGGGGCTGAGAAAGTCAAGATTGGCGGCATCAAGATTGAGTTTGCTTCAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009536 GO:0009543 GO:0009579 GO:0031976 GO:0031977 GO:0031978 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00350 ko00950 ko01100 ko01110 map00350 map00950 map01100 map01110

Pfam Domains

Protein Families

PPO1_DWL PPO1_KFDV Tyrosinase

Protein Analysis

605

Amino Acids

67.37

Weight (kDa)

7.29

Isoelectric Point (pI)

39.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tyrosinase	PF00264	175 - 382	4.9e-38	Common central domain of tyrosinase
PPO1_DWL	PF12142	389 - 440	2e-27	Polyphenol oxidase middle domain
PPO1_KFDV	PF12143	474 - 602	1.7e-53	Chloroplastic Polyphenol Oxidase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000836)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g09060 FvH4_3g02000 FvH4_3g04660 FvH4_3g04670 FvH4_6g20570
malus_domestica	MD05G1319100.v1.1 MD05G1319300.v1.1 MD05G1319400.v1.1 MD05G1319500.v1.1 MD10G1298400.v1.1 MD10G1298500.v1.1 MD10G1298700.v1.1 MD10G1299100.v1.1 MD10G1299300.v1.1 MD10G1299400.v1.1
prunus_persica	Prupe.4G041400_v2.0.a1 Prupe.4G041900_v2.0.a1 Prupe.8G095500_v2.0.a1
pyrus_communis	pycom05g29510 pycom10g25180 pycom10g25190 pycom10g25200
rosa_chinensis	RchiOBHm_Chr5g0007711 RchiOBHm_Chr6g0264851 RchiOBHm_Chr6g0264871 RchiOBHm_Chr6g0264881
rosa_laevigata	RLG00000014231 RLG00000031477 RLG00000031478 RLG00000031480
rosa_multiflora	Rmu_co8436503.1_g000001 Rmu_sc0000546.1_g000043 Rmu_sc0000546.1_g000046 Rmu_sc0002934.1_g000059 Rmu_sc0005098.1_g000024 Rmu_sc0011744.1_g000007 Rmu_sc0011744.1_g000008
rosa_roxburghii	Rroxscaffold_175G00432040 Rroxscaffold_1G00068700 Rroxscaffold_1G00068740 Rroxscaffold_1G00068750 Rroxscaffold_7G00203160 Rroxscaffold_7G00203180
rosa_rugosa	Rorug04G0429200 Rorug04G0429400 Rorug04G0429600 Rorug06G0014200 Rorug06G0014300
rosa_samantha	Rh5AG057300 Rh5AG057400 Rh5AG058000 Rh5BG054300 Rh5CG064200 Rh5CG064300 Rh5CG064500 Rh5DG053500 Rh5DG053800 Rh6AG134800 Rh6AG134900 Rh6BG132400 Rh6CG131000 Rh6CG131100 Rh6DG118000 Rh6DG118100
rosa_wichuraiana	Rw5G005330 Rw5G005340 Rw5G006170 Rw6G011670

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1372, 1763
AccBSI	CCGCTC	2 cut(s)	778, 1163
AccI	GTMKAC	2 cut(s)	216, 1290
AccII	CGCG	3 cut(s)	429, 1220, 1385
AclI	AACGTT	2 cut(s)	546, 1116
AclWI	GGATC	3 cut(s)	512, 625, 994
AcoI	YGGCCR	1 cut(s)	1458
AcsI	RAATTY	2 cut(s)	85, 93
AcuI	CTGAAG	1 cut(s)	1794
AcyI	GRCGYC	1 cut(s)	1436
AfaI	GTAC	6 cut(s)	40, 52, 656, 899, 1242, 1280
AfiI	CCNNNNNNNGG	9 cut(s)	219, 327, 955, 977, 983, 1333, 1372, 1507, 1763
AflII	CTTAAG	1 cut(s)	842
AgeI	ACCGGT	1 cut(s)	1012
AgsI	TTSAA	2 cut(s)	532, 1526
AhlI	ACTAGT	1 cut(s)	22
AjiI	CACGTC	1 cut(s)	1549
AjnI	CCWGG	3 cut(s)	113, 748, 1460
AjuI	GAANNNNNNNTTGG	2 cut(s)	573, 605
Alw21I	GWGCWC	3 cut(s)	355, 495, 606
Alw26I	GTCTC	9 cut(s)	145, 245, 322, 862, 989, 1080, 1382, 1539, 1727
Alw44I	GTGCAC	1 cut(s)	351
AlwI	GGATC	3 cut(s)	512, 625, 994
AlwNI	CAGNNNCTG	1 cut(s)	1178
Ama87I	CYCGRG	1 cut(s)	599
AoxI	GGCC	5 cut(s)	330, 434, 483, 1458, 1463
ApaLI	GTGCAC	1 cut(s)	351
ApeKI	GCWGC	1 cut(s)	742
ApoI	RAATTY	2 cut(s)	85, 93
ArsI	GACNNNNNNTTYG	2 cut(s)	683, 715
AsiGI	ACCGGT	1 cut(s)	1012
AspA2I	CCTAGG	2 cut(s)	673, 1147
AspS9I	GGNCC	6 cut(s)	330, 1010, 1015, 1026, 1498, 1601
AsuC2I	CCSGG	2 cut(s)	978, 1195
AsuHPI	GGTGA	6 cut(s)	6, 19, 1097, 1531, 1567, 1756
AvaI	CYCGRG	1 cut(s)	599
AvaII	GGWCC	5 cut(s)	1010, 1015, 1026, 1498, 1601
AvrII	CCTAGG	2 cut(s)	673, 1147
BaeGI	GKGCMC	1 cut(s)	355
BalI	TGGCCA	1 cut(s)	1460
BanII	GRGCYC	3 cut(s)	495, 606, 1417
BarI	GAAGNNNNNNTAC	2 cut(s)	43, 75
BauI	CACGAG	1 cut(s)	1502
BbsI	GAAGAC	2 cut(s)	60, 1148
Bbv12I	GWGCWC	3 cut(s)	355, 495, 606
BbvI	GCAGC	1 cut(s)	754
BccI	CCATC	1 cut(s)	494
BceAI	ACGGC	3 cut(s)	157, 434, 1311
BcgI	CGANNNNNNTGC	2 cut(s)	1210, 1244
BciT130I	CCWGG	3 cut(s)	115, 750, 1462
BcnI	CCSGG	2 cut(s)	978, 1195
BcoDI	GTCTC	9 cut(s)	145, 245, 322, 862, 989, 1080, 1382, 1539, 1727
BcuI	ACTAGT	1 cut(s)	22
BfaI	CTAG	5 cut(s)	23, 674, 972, 1148, 1268
BfmI	CTRYAG	1 cut(s)	345
BfrI	CTTAAG	1 cut(s)	842
BglI	GCCNNNNNGGC	2 cut(s)	817, 1648
BglII	AGATCT	1 cut(s)	595
BisI	GCNGC	8 cut(s)	333, 441, 743, 776, 812, 1383, 1643, 1789
BlnI	CCTAGG	2 cut(s)	673, 1147
BlsI	GCNGC	8 cut(s)	334, 442, 744, 777, 813, 1384, 1644, 1790
BmcAI	AGTACT	1 cut(s)	52
Bme1390I	CCNGG	5 cut(s)	115, 750, 978, 1195, 1462
Bme18I	GGWCC	5 cut(s)	1010, 1015, 1026, 1498, 1601
BmeT110I	CYCGRG	1 cut(s)	599
BmgBI	CACGTC	1 cut(s)	1549
BmgT120I	GGNCC	6 cut(s)	330, 1010, 1015, 1026, 1498, 1601
BmiI	GGNNCC	4 cut(s)	306, 331, 1133, 1484
BmrFI	CCNGG	5 cut(s)	115, 750, 978, 1195, 1462
BmrI	ACTGGG	2 cut(s)	42, 730
BmsI	GCATC	4 cut(s)	181, 715, 1327, 1800
BmuI	ACTGGG	2 cut(s)	42, 730
BpiI	GAAGAC	2 cut(s)	60, 1148
BplI	GAGNNNNNCTC	2 cut(s)	461, 493
BpmI	CTGGAG	1 cut(s)	1727
Bpu10I	CCTNAGC	1 cut(s)	930
BpuEI	CTTGAG	4 cut(s)	19, 872, 1073, 1702
BpuMI	CCSGG	2 cut(s)	978, 1195
Bsa29I	ATCGAT	1 cut(s)	396
BsaAI	YACGTR	2 cut(s)	524, 1244
BsaBI	GATNNNNATC	1 cut(s)	516
BsaHI	GRCGYC	1 cut(s)	1436
BsaI	GGTCTC	2 cut(s)	245, 1080
BsaWI	WCCGGW	2 cut(s)	1012, 1603
Bsc4I	CCNNNNNNNGG	9 cut(s)	219, 327, 955, 977, 983, 1333, 1372, 1507, 1763
Bse118I	RCCGGY	3 cut(s)	1012, 1028, 1079
Bse1I	ACTGG	2 cut(s)	48, 725
Bse8I	GATNNNNATC	1 cut(s)	516
BseBI	CCWGG	3 cut(s)	115, 750, 1462
BseCI	ATCGAT	1 cut(s)	396
BseGI	GGATG	5 cut(s)	730, 853, 1293, 1342, 1591
BseJI	GATNNNNATC	1 cut(s)	516
BseLI	CCNNNNNNNGG	9 cut(s)	219, 327, 955, 977, 983, 1333, 1372, 1507, 1763
BseMII	CTCAG	1 cut(s)	1761
BseNI	ACTGG	2 cut(s)	48, 725
BseRI	GAGGAG	5 cut(s)	297, 1311, 1495, 1520, 1523
BseSI	GKGCMC	1 cut(s)	355
BseXI	GCAGC	1 cut(s)	754
BseYI	CCCAGC	2 cut(s)	1041, 1622
Bsh1236I	CGCG	3 cut(s)	429, 1220, 1385
BshFI	GGCC	5 cut(s)	332, 436, 485, 1460, 1465
BshTI	ACCGGT	1 cut(s)	1012
BshVI	ATCGAT	1 cut(s)	396
BsiHKAI	GWGCWC	3 cut(s)	355, 495, 606
BsiHKCI	CYCGRG	1 cut(s)	599
BsiSI	CCGG	6 cut(s)	978, 1013, 1029, 1080, 1194, 1604
BslFI	GGGAC	1 cut(s)	977
BslI	CCNNNNNNNGG	9 cut(s)	219, 327, 955, 977, 983, 1333, 1372, 1507, 1763
BsmAI	GTCTC	9 cut(s)	145, 245, 322, 862, 989, 1080, 1382, 1539, 1727
BsmBI	CGTCTC	2 cut(s)	862, 1539
BsmFI	GGGAC	1 cut(s)	977
BsmI	GAATGC	1 cut(s)	118
BsnI	GGCC	5 cut(s)	332, 436, 485, 1460, 1465
Bso31I	GGTCTC	2 cut(s)	245, 1080
BsoBI	CYCGRG	1 cut(s)	599
Bsp1286I	GDGCHC	4 cut(s)	355, 495, 606, 1417
Bsp1407I	TGTACA	1 cut(s)	897
Bsp143I	GATC	5 cut(s)	517, 595, 617, 891, 986
Bsp19I	CCATGG	2 cut(s)	1298, 1366
BspANI	GGCC	5 cut(s)	332, 436, 485, 1460, 1465
BspCNI	CTCAG	1 cut(s)	1762
BspDI	ATCGAT	1 cut(s)	396
BspFNI	CGCG	3 cut(s)	429, 1220, 1385
BspHI	TCATGA	1 cut(s)	495
BspLI	GGNNCC	4 cut(s)	306, 331, 1133, 1484
BspPI	GGATC	3 cut(s)	512, 625, 994
BspTI	CTTAAG	1 cut(s)	842
BspTNI	GGTCTC	2 cut(s)	245, 1080
BsrBI	CCGCTC	2 cut(s)	778, 1163
BsrFI	RCCGGY	3 cut(s)	1012, 1028, 1079
BsrGI	TGTACA	1 cut(s)	897
BsrI	ACTGG	2 cut(s)	48, 725
BssAI	RCCGGY	3 cut(s)	1012, 1028, 1079
BssMI	GATC	5 cut(s)	517, 595, 617, 891, 986
BssNI	GRCGYC	1 cut(s)	1436
BssSI	CACGAG	1 cut(s)	1502
BssT1I	CCWWGG	7 cut(s)	480, 673, 1147, 1298, 1366, 1398, 1757
Bst2BI	CACGAG	1 cut(s)	1502
Bst2UI	CCWGG	3 cut(s)	115, 750, 1462
Bst4CI	ACNGT	6 cut(s)	161, 214, 417, 554, 1124, 1738
Bst6I	CTCTTC	2 cut(s)	1472, 1604
BstACI	GRCGYC	1 cut(s)	1436
BstAFI	CTTAAG	1 cut(s)	842
BstAUI	TGTACA	1 cut(s)	897
BstBAI	YACGTR	2 cut(s)	524, 1244
BstC8I	GCNNGC	6 cut(s)	130, 438, 586, 680, 736, 740
BstDEI	CTNAG	2 cut(s)	930, 1770
BstDSI	CCRYGG	4 cut(s)	613, 1298, 1366, 1383
BstF5I	GGATG	5 cut(s)	730, 853, 1293, 1342, 1591
BstFNI	CGCG	3 cut(s)	429, 1220, 1385
BstKTI	GATC	5 cut(s)	520, 598, 620, 894, 989
BstMAI	GTCTC	9 cut(s)	145, 245, 322, 862, 989, 1080, 1382, 1539, 1727
BstMBI	GATC	5 cut(s)	517, 595, 617, 891, 986
BstMWI	GCNNNNNNNGC	4 cut(s)	446, 817, 1382, 1648
BstNI	CCWGG	3 cut(s)	115, 750, 1462
BstNSI	RCATGY	1 cut(s)	742
BstSCI	CCNGG	5 cut(s)	113, 748, 976, 1193, 1460
BstSFI	CTRYAG	1 cut(s)	345
BstSLI	GKGCMC	1 cut(s)	355
BstUI	CGCG	3 cut(s)	429, 1220, 1385
BstV1I	GCAGC	1 cut(s)	754
BstV2I	GAAGAC	2 cut(s)	60, 1148
BstX2I	RGATCY	1 cut(s)	595
BstXI	CCANNNNNNTGG	2 cut(s)	301, 1405
BstYI	RGATCY	1 cut(s)	595
Bsu15I	ATCGAT	1 cut(s)	396
BsuRI	GGCC	5 cut(s)	332, 436, 485, 1460, 1465
BsuTUI	ATCGAT	1 cut(s)	396
BtgI	CCRYGG	4 cut(s)	613, 1298, 1366, 1383
BtrI	CACGTC	1 cut(s)	1549
BtsCI	GGATG	5 cut(s)	730, 853, 1293, 1342, 1591
BtsI	GCAGTG	1 cut(s)	1461
BtsIMutI	CAGTG	4 cut(s)	166, 273, 550, 1461
Cac8I	GCNNGC	6 cut(s)	130, 438, 586, 680, 736, 740
CaiI	CAGNNNCTG	1 cut(s)	1178
CciI	TCATGA	1 cut(s)	495
Cfr10I	RCCGGY	3 cut(s)	1012, 1028, 1079
Cfr13I	GGNCC	6 cut(s)	330, 1010, 1015, 1026, 1498, 1601
Cfr42I	CCGCGG	1 cut(s)	1386
ClaI	ATCGAT	1 cut(s)	396
CseI	GACGC	2 cut(s)	418, 1425
Csp6I	GTAC	6 cut(s)	39, 51, 655, 898, 1241, 1279
CspAI	ACCGGT	1 cut(s)	1012
CviAII	CATG	9 cut(s)	144, 496, 621, 739, 895, 1007, 1060, 1299, 1367
CviQI	GTAC	6 cut(s)	39, 51, 655, 898, 1241, 1279
DdeI	CTNAG	2 cut(s)	930, 1770
DpnI	GATC	5 cut(s)	519, 597, 619, 893, 988
DpnII	GATC	5 cut(s)	517, 595, 617, 891, 986
EaeI	YGGCCR	1 cut(s)	1458
Eam1104I	CTCTTC	2 cut(s)	1472, 1604
EarI	CTCTTC	2 cut(s)	1472, 1604
Ecl136II	GAGCTC	2 cut(s)	493, 604
Eco130I	CCWWGG	7 cut(s)	480, 673, 1147, 1298, 1366, 1398, 1757
Eco24I	GRGCYC	3 cut(s)	495, 606, 1417
Eco31I	GGTCTC	2 cut(s)	245, 1080
Eco47I	GGWCC	5 cut(s)	1010, 1015, 1026, 1498, 1601
Eco53kI	GAGCTC	2 cut(s)	493, 604
Eco57I	CTGAAG	1 cut(s)	1794
Eco88I	CYCGRG	1 cut(s)	599
EcoICRI	GAGCTC	2 cut(s)	493, 604
EcoRI	GAATTC	1 cut(s)	85
EcoRII	CCWGG	3 cut(s)	113, 748, 1460
EcoT14I	CCWWGG	7 cut(s)	480, 673, 1147, 1298, 1366, 1398, 1757
EcoT38I	GRGCYC	3 cut(s)	495, 606, 1417
ErhI	CCWWGG	7 cut(s)	480, 673, 1147, 1298, 1366, 1398, 1757
Esp3I	CGTCTC	2 cut(s)	862, 1539
FaeI	CATG	9 cut(s)	147, 499, 624, 742, 898, 1010, 1063, 1302, 1370
FalI	AAGNNNNNCTT	2 cut(s)	923, 955
FaqI	GGGAC	1 cut(s)	977
FatI	CATG	9 cut(s)	143, 495, 620, 738, 894, 1006, 1059, 1298, 1366
FblI	GTMKAC	2 cut(s)	216, 1290
Fnu4HI	GCNGC	8 cut(s)	333, 441, 743, 776, 812, 1383, 1643, 1789
FokI	GGATG	5 cut(s)	737, 860, 1280, 1349, 1598
FriOI	GRGCYC	3 cut(s)	495, 606, 1417
Fsp4HI	GCNGC	8 cut(s)	333, 441, 743, 776, 812, 1383, 1643, 1789
FspBI	CTAG	5 cut(s)	23, 674, 972, 1148, 1268
GluI	GCNGC	8 cut(s)	333, 441, 743, 776, 812, 1383, 1643, 1789
GsaI	CCCAGC	2 cut(s)	1045, 1626
GsuI	CTGGAG	1 cut(s)	1727
HaeIII	GGCC	5 cut(s)	332, 436, 485, 1460, 1465
HapII	CCGG	6 cut(s)	978, 1013, 1029, 1080, 1194, 1604
HgaI	GACGC	2 cut(s)	418, 1425
Hin1I	GRCGYC	1 cut(s)	1436
Hin1II	CATG	9 cut(s)	147, 499, 624, 742, 898, 1010, 1063, 1302, 1370
HincII	GTYRAC	2 cut(s)	454, 1120
HindII	GTYRAC	2 cut(s)	454, 1120
HindIII	AAGCTT	1 cut(s)	1429
HinfI	GANTC	8 cut(s)	138, 669, 1048, 1175, 1190, 1256, 1318, 1753
HpaII	CCGG	6 cut(s)	978, 1013, 1029, 1080, 1194, 1604
HphI	GGTGA	6 cut(s)	6, 19, 1097, 1531, 1567, 1756
Hpy188I	TCNGA	6 cut(s)	187, 245, 794, 1180, 1425, 1813
Hpy99I	CGWCG	1 cut(s)	191
HpyAV	CCTTC	6 cut(s)	82, 646, 1231, 1483, 1489, 1520
HpyCH4III	ACNGT	6 cut(s)	161, 214, 417, 554, 1124, 1738
HpyCH4IV	ACGT	8 cut(s)	523, 546, 698, 855, 1116, 1243, 1287, 1548
HpyCH4V	TGCA	6 cut(s)	128, 147, 194, 353, 742, 1454
HpyF10VI	GCNNNNNNNGC	4 cut(s)	446, 817, 1382, 1648
HpyF3I	CTNAG	2 cut(s)	930, 1770
HpySE526I	ACGT	8 cut(s)	523, 546, 698, 855, 1116, 1243, 1287, 1548
Hsp92I	GRCGYC	1 cut(s)	1436
Hsp92II	CATG	9 cut(s)	147, 499, 624, 742, 898, 1010, 1063, 1302, 1370
KspI	CCGCGG	1 cut(s)	1386
Kzo9I	GATC	5 cut(s)	517, 595, 617, 891, 986
Lsp1109I	GCAGC	1 cut(s)	754
LweI	GCATC	4 cut(s)	181, 715, 1327, 1800
MaeI	CTAG	5 cut(s)	23, 674, 972, 1148, 1268
MaeII	ACGT	8 cut(s)	523, 546, 698, 855, 1116, 1243, 1287, 1548
MaeIII	GTNAC	7 cut(s)	12, 25, 161, 563, 1244, 1355, 1744
MalI	GATC	5 cut(s)	519, 597, 619, 893, 988
MbiI	CCGCTC	2 cut(s)	778, 1163
MboI	GATC	5 cut(s)	517, 595, 617, 891, 986
MboII	GAAGA	6 cut(s)	60, 1153, 1486, 1489, 1621, 1678
MflI	RGATCY	1 cut(s)	595
MhlI	GDGCHC	4 cut(s)	355, 495, 606, 1417
MlsI	TGGCCA	1 cut(s)	1460
MluCI	AATT	4 cut(s)	85, 93, 102, 1349
MluNI	TGGCCA	1 cut(s)	1460
MlyI	GAGTC	4 cut(s)	147, 1169, 1184, 1312
MmeI	TCCRAC	5 cut(s)	201, 210, 885, 939, 1167
Mox20I	TGGCCA	1 cut(s)	1460
MscI	TGGCCA	1 cut(s)	1460
MseI	TTAA	4 cut(s)	101, 843, 1671, 1816
MslI	CAYNNNNRTG	1 cut(s)	123
Msp20I	TGGCCA	1 cut(s)	1460
MspA1I	CMGCKG	2 cut(s)	440, 1385
MspCI	CTTAAG	1 cut(s)	842
MspI	CCGG	6 cut(s)	978, 1013, 1029, 1080, 1194, 1604
MspR9I	CCNGG	5 cut(s)	115, 750, 978, 1195, 1462
Mva1269I	GAATGC	1 cut(s)	118
MvaI	CCWGG	3 cut(s)	115, 750, 1462
MvnI	CGCG	3 cut(s)	429, 1220, 1385
MwoI	GCNNNNNNNGC	4 cut(s)	446, 817, 1382, 1648
NciI	CCSGG	2 cut(s)	978, 1195
NcoI	CCATGG	2 cut(s)	1298, 1366
NdeII	GATC	5 cut(s)	517, 595, 617, 891, 986
NlaIII	CATG	9 cut(s)	147, 499, 624, 742, 898, 1010, 1063, 1302, 1370
NlaIV	GGNNCC	4 cut(s)	306, 331, 1133, 1484
NmeAIII	GCCGAG	3 cut(s)	840, 1620, 1747
NmuCI	GTSAC	7 cut(s)	12, 25, 161, 563, 1244, 1355, 1744
NspI	RCATGY	1 cut(s)	742
PaeI	GCATGC	1 cut(s)	742
PaeR7I	CTCGAG	1 cut(s)	599
PagI	TCATGA	1 cut(s)	495
PcsI	WCGNNNNNNNCGW	2 cut(s)	573, 861
PctI	GAATGC	1 cut(s)	118
PfeI	GAWTC	4 cut(s)	669, 1048, 1256, 1753
PflMI	CCANNNNNTGG	2 cut(s)	1372, 1763
PinAI	ACCGGT	1 cut(s)	1012
PkrI	GCNGC	8 cut(s)	334, 442, 744, 777, 813, 1384, 1644, 1790
PleI	GAGTC	4 cut(s)	146, 1169, 1184, 1312
PpsI	GAGTC	4 cut(s)	146, 1169, 1184, 1312
Ppu21I	YACGTR	2 cut(s)	524, 1244
Psp124BI	GAGCTC	2 cut(s)	495, 606
Psp1406I	AACGTT	2 cut(s)	546, 1116
Psp6I	CCWGG	3 cut(s)	113, 748, 1460
PspFI	CCCAGC	2 cut(s)	1041, 1622
PspGI	CCWGG	3 cut(s)	113, 748, 1460
PspN4I	GGNNCC	4 cut(s)	306, 331, 1133, 1484
PspPI	GGNCC	6 cut(s)	330, 1010, 1015, 1026, 1498, 1601
PstNI	CAGNNNCTG	1 cut(s)	1178
PsuI	RGATCY	1 cut(s)	595
RsaI	GTAC	6 cut(s)	40, 52, 656, 899, 1242, 1280
RsaNI	GTAC	6 cut(s)	39, 51, 655, 898, 1241, 1279
RseI	CAYNNNNRTG	1 cut(s)	123
SacI	GAGCTC	2 cut(s)	495, 606
SacII	CCGCGG	1 cut(s)	1386
SaqAI	TTAA	4 cut(s)	101, 843, 1671, 1816
SatI	GCNGC	8 cut(s)	333, 441, 743, 776, 812, 1383, 1643, 1789
Sau3AI	GATC	5 cut(s)	517, 595, 617, 891, 986
Sau96I	GGNCC	6 cut(s)	330, 1010, 1015, 1026, 1498, 1601
ScaI	AGTACT	1 cut(s)	52
SchI	GAGTC	4 cut(s)	147, 1169, 1184, 1312
ScrFI	CCNGG	5 cut(s)	115, 750, 978, 1195, 1462
SduI	GDGCHC	4 cut(s)	355, 495, 606, 1417
SfaNI	GCATC	4 cut(s)	181, 715, 1327, 1800
SfcI	CTRYAG	1 cut(s)	345
Sfr274I	CTCGAG	1 cut(s)	599
Sfr303I	CCGCGG	1 cut(s)	1386
SgrBI	CCGCGG	1 cut(s)	1386
SinI	GGWCC	5 cut(s)	1010, 1015, 1026, 1498, 1601
SlaI	CTCGAG	1 cut(s)	599
SmiMI	CAYNNNNRTG	1 cut(s)	123
SmlI	CTYRAG	6 cut(s)	34, 599, 842, 887, 1052, 1681
SmoI	CTYRAG	6 cut(s)	34, 599, 842, 887, 1052, 1681
SpeI	ACTAGT	1 cut(s)	22
SphI	GCATGC	1 cut(s)	742
Sse9I	AATT	4 cut(s)	85, 93, 102, 1349
SspMI	CTAG	5 cut(s)	23, 674, 972, 1148, 1268
SstI	GAGCTC	2 cut(s)	495, 606
StyD4I	CCNGG	5 cut(s)	113, 748, 976, 1193, 1460
StyI	CCWWGG	7 cut(s)	480, 673, 1147, 1298, 1366, 1398, 1757
TaaI	ACNGT	6 cut(s)	161, 214, 417, 554, 1124, 1738
TaiI	ACGT	8 cut(s)	526, 549, 701, 858, 1119, 1246, 1290, 1551
TaqI	TCGA	4 cut(s)	396, 489, 600, 1254
TaqII	GACCGA	1 cut(s)	227
TasI	AATT	4 cut(s)	85, 93, 102, 1349
TatI	WGTACW	3 cut(s)	50, 654, 897
TauI	GCSGC	7 cut(s)	335, 443, 778, 814, 1385, 1645, 1791
TfiI	GAWTC	4 cut(s)	669, 1048, 1256, 1753
Tru1I	TTAA	4 cut(s)	101, 843, 1671, 1816
Tru9I	TTAA	4 cut(s)	101, 843, 1671, 1816
TscAI	CASTG	4 cut(s)	166, 280, 557, 1461
TseFI	GTSAC	7 cut(s)	12, 25, 161, 563, 1244, 1355, 1744
TseI	GCWGC	1 cut(s)	742
Tsp45I	GTSAC	7 cut(s)	12, 25, 161, 563, 1244, 1355, 1744
TspDTI	ATGAA	2 cut(s)	512, 864
TspGWI	ACGGA	2 cut(s)	582, 630
TspRI	CASTG	4 cut(s)	166, 280, 557, 1461
Van91I	CCANNNNNTGG	2 cut(s)	1372, 1763
Vha464I	CTTAAG	1 cut(s)	842
VneI	GTGCAC	1 cut(s)	351
VpaK11BI	GGWCC	5 cut(s)	1010, 1015, 1026, 1498, 1601
XapI	RAATTY	2 cut(s)	85, 93
XceI	RCATGY	1 cut(s)	742
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1402
XhoI	CTCGAG	1 cut(s)	599
XmaJI	CCTAGG	2 cut(s)	673, 1147
XmiI	GTMKAC	2 cut(s)	216, 1290
XspI	CTAG	5 cut(s)	23, 674, 972, 1148, 1268
ZrmI	AGTACT	1 cut(s)	52

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.