Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0003337

Physical Location & Seq

Genomic Coordinates Forward (+)

2269510 .. 2276680

Gene Structure 7171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G047600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGGCCGGCCGGTTCGGGTTCTCATCCTCTTCTCCCGCGACCACGATGATAGTCACCAACACCCCGGCTGCAGATCTGGCTTTGACCAATCTGGCCTACTGCTCGCCCACCGATCTTCAAAACTTCGCCATCCCTGGCACCAGGCTCAATCTGGCTTCCGTCGGCGACGCCTTCGTCCTCACTGTCTCTCCTCATCAAAGCATACAAAAGGGTCACATTGCGCTGAACGCAATCCAACGGCGGCATGCTAGAGTGTCCACTGGCGATTCAGTGTCTGTGAGCAGGTTTGTTCCGCCTGAGGATTTCAACCTGGCGCTGCTCACGCTAGATTTGGAGTTTGTGAAAAAAGGGACTAAAAGTGAACAGGTTGATGCTGTTCTCTTGTCAAACCAACTTAAAAAGAAGTTTATGAACCAGGTTATGACGGCTGGACAAAGAGTATCATTTGAGTTTCAGGGGATTAATTACATTTTCACTGTTAATCAAGCTGCTGTAGAGGGACAAGAAACCTCTAATGGTATAGAAAGAGGAATGATTGTGAATGACACATACATTGTCTTCGAGACATCAAAAGCAAGTGGTATAAAGATCGTAAATCAGCGTGAAGCTGCAAGTAGCAGCATATTCAGGCATAAAGAATTTAATCTTCAAACTCTTGGAATTGGTGGCTTAGGTGACGAGTTTGCAGACATATTTCGAAGAGCTTTTGCCTCCCGTGTATTCCCTCCACACGTGACAAATAAATTAGGGATCAAGCATGTAAAGGGTATGCTGCTTTATGGGCCACCTGGTACTGGAAAAACTCTCATGGCTCGTCAAATTGGAAAGATGTTGAACGGGAAAGAACCAAAGATTGTTAATGGCCCTGAAGTCTTGAGCAAGTTTGTCGGTGAAACTGAAAAAAATGTTAGGGATCTATTTGCCGATGCTGAGAATGATCAAAGGGCTAATGGAGACCAAAGTGATTTGCATGTGATAATCTTTGATGAAATTGATGCTATTTGTAAGTCAAGAGGATCAACTAGAGATGGTACAGGGGTTCATGACAGTATTGTGAACCAATTACTCACAAAGATTGATGGCGTGGAGTCTCTCAATAATGTTTTGCTTATTGGGATGACTAACAGAAAAGATTTGCTCGATGAAGCCCTTTTGAGGCCAGGACGTCTGGAAGTGCAAATTGAGATAAGCCTTCCTGATGAAAATGGTCGTCTACAGATTCTACAAATTCATACAAACAAGATGAAGGAGAGCTCTTTTCTTGCTCCGGATGTGAACCTCCAAGAGCTTGCGGCTCGCACAAAAAACTATAGTGGTGCAGAACTTGAAGGTGTCGTTAAAAGTGCAGTATCATTTGCTTTGAATAGGCAATTAAGTTTGGATGATCTGACCAAGCCAGTGGATGAAGAGAGTATTAAAGTTACCATGGATGATTTTCTGCATGCACTCCATGAAATTGTACCTGCATTTGGAGCCTCCACTGATGACCTTGAAAGATGCAGAATTGATGGCATGGTGGATTGTGGTGATCGACATAAGCACATTTATCAAAGAGCTATGCTGCTAGTGGAGCAAGTTAAATTGAGCAAAGGAAGCCCACTTGTTACATGCCTTCTGGAAGGCCCTAGTGGCAGTGGTAAATCTGCACTAGCAGCTACTGTTGGCATCGACAGTGATTTTCCCTATGTCAAGATTGTTTCTGCTGAGACAATGATTGGTCTTCATGAGAGCACCAAATGTGCCCAAATTTTAAAGGTTTTTGAGGATGCATACAAGTCACCATTGAGCATCATTATCCTCGATGACATTGAGAGGTTACTGGAGTATGTTGCTATTGGTCCGAGGTTTTCAAATGTGCTATCTCAAACACTGTTGGTCCTTCTGAAGCGCCTTCCTCCGAAGGGAAAAAAGCTTCTGGTGTTTGGAACAACAAGTGAATTGGGCTTCCTAGATTCAATCGGTTTTTGTAATACCTTCTCTGTGACTTACAATGTTCCCACATTAAAGACAGAGGATGCAAAGCAGGTGCTAGCACAGTTGAATGTTTTTGCTGATGAAGACATTCATGCTGCGGCAGAGGCCCTAAATGATATGCCTATCAAGAAGCTCTATATGGTAATTGAGATGGCAGCCCAGGGTGAGGAAGGAGGATCTGCCGAGGCAATCTACTCTGGAAAAGAGAAGATAAACATCCAATTCTTCTATGATTGCCTTCAGGATATTGTTCGATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005911 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04138 ko04721 ko04727 ko04962 map04138 map04721 map04727 map04962

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N

Protein Analysis

745

Amino Acids

81.52

Weight (kDa)

5.65

Isoelectric Point (pI)

32.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04910
fragaria_vesca	FvH4_3g09180 FvH4_4g01371 FvH4_4g01380
malus_domestica	MD05G1312500.v1.1 MD05G1339600.v1.1 MD10G1294300.v1.1
prunus_persica	Prupe.4G047600_v2.0.a1
pyrus_communis	pycom05g29040 pycom10g24600
rosa_chinensis	RchiOBHm_Chr4g0419821 RchiOBHm_Chr5g0005931 RchiOBHm_Chr5g0005941 RchiOBHm_Chr5g0008441
rosa_laevigata	RLG00000031340 RLG00000031347 RLG00000031352 RLG00000031389 RLG00000031572
rosa_multiflora	Rmu_sc0000720.1_g000006 Rmu_sc0004326.1_g000001 Rmu_sc0006414.1_g000006
rosa_roxburghii	Rroxscaffold_1G00068050
rosa_rugosa	Rorug04G0435800
rosa_samantha	Rh4AG222000 Rh4BG224200 Rh4CG235100 Rh4DG221000 Rh5AG064700 Rh5BG061700 Rh5CG071500 Rh5CG071600 Rh5CG071800 Rh5CG071900
rosa_wichuraiana	Rw4G019100 Rw5G005630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2014
AasI	GACNNNNNNGTC	1 cut(s)	173
AatII	GACGTC	1 cut(s)	1168
Acc36I	ACCTGC	3 cut(s)	273, 1471, 2014
AccB1I	GGYRCC	1 cut(s)	137
AccI	GTMKAC	1 cut(s)	1213
AccII	CGCG	1 cut(s)	38
AccIII	TCCGGA	1 cut(s)	1267
AciI	CCGC	5 cut(s)	36, 241, 293, 1292, 2072
AclWI	GGATC	4 cut(s)	758, 921, 1024, 2158
AcoI	YGGCCR	2 cut(s)	3, 7
AcsI	RAATTY	3 cut(s)	638, 1227, 1746
AcuI	CTGAAG	3 cut(s)	888, 1904, 2198
AcvI	CACGTG	1 cut(s)	733
AcyI	GRCGYC	2 cut(s)	168, 1165
AfaI	GTAC	3 cut(s)	793, 1033, 1461
AfiI	CCNNNNNNNGG	5 cut(s)	794, 1155, 1469, 1901, 2140
AflIII	ACRYGT	1 cut(s)	730
AjnI	CCWGG	7 cut(s)	133, 140, 309, 414, 787, 1159, 2133
AluBI	AGCT	9 cut(s)	488, 608, 704, 1254, 1288, 1556, 1655, 1912, 2107
AluI	AGCT	9 cut(s)	488, 608, 704, 1254, 1288, 1556, 1655, 1912, 2107
Alw21I	GWGCWC	2 cut(s)	1256, 1733
Alw26I	GTCTC	5 cut(s)	190, 557, 948, 1095, 1700
AlwI	GGATC	4 cut(s)	758, 921, 1024, 2158
AlwNI	CAGNNNCTG	2 cut(s)	275, 1658
Aor13HI	TCCGGA	1 cut(s)	1267
AoxI	GGCC	8 cut(s)	3, 7, 93, 782, 862, 1157, 1621, 2079
ApoI	RAATTY	3 cut(s)	638, 1227, 1746
AseI	ATTAAT	1 cut(s)	462
Asp700I	GAANNNNTTC	1 cut(s)	2061
AspLEI	GCGC	3 cut(s)	223, 316, 1890
AspS9I	GGNCC	6 cut(s)	782, 863, 1622, 1838, 1876, 2080
AsuC2I	CCSGG	1 cut(s)	65
AsuHPI	GGTGA	6 cut(s)	46, 686, 902, 1538, 1770, 2150
AsuII	TTCGAA	1 cut(s)	697
AsuNHI	GCTAGC	1 cut(s)	2029
AvaII	GGWCC	2 cut(s)	1838, 1876
AxyI	CCTNAGG	1 cut(s)	297
BaeGI	GKGCMC	1 cut(s)	1744
BaeI	ACNNNNGTAYC	2 cut(s)	1023, 1056
BanI	GGYRCC	1 cut(s)	137
BanII	GRGCYC	1 cut(s)	1256
BbrPI	CACGTG	1 cut(s)	733
BbsI	GAAGAC	3 cut(s)	550, 1712, 2064
Bbv12I	GWGCWC	2 cut(s)	1256, 1733
BccI	CCATC	5 cut(s)	137, 1022, 1073, 1502, 2119
BceAI	ACGGC	2 cut(s)	254, 441
BcgI	CGANNNNNNTGC	2 cut(s)	868, 902
BciT130I	CCWGG	7 cut(s)	135, 142, 311, 416, 789, 1161, 2135
BclI	TGATCA	1 cut(s)	937
BcnI	CCSGG	1 cut(s)	65
BcoDI	GTCTC	5 cut(s)	190, 557, 948, 1095, 1700
BfaI	CTAG	8 cut(s)	249, 326, 1023, 1565, 1626, 1649, 1949, 2030
BfmI	CTRYAG	4 cut(s)	69, 492, 1214, 1309
BfoI	RGCGCY	2 cut(s)	317, 1891
BfuAI	ACCTGC	3 cut(s)	273, 1471, 2014
BglI	GCCNNNNNGGC	1 cut(s)	1629
BglII	AGATCT	1 cut(s)	73
Bme1390I	CCNGG	8 cut(s)	65, 135, 142, 311, 416, 789, 1161, 2135
Bme18I	GGWCC	2 cut(s)	1838, 1876
BmgT120I	GGNCC	6 cut(s)	782, 863, 1622, 1838, 1876, 2080
BmiI	GGNNCC	2 cut(s)	139, 1474
BmrFI	CCNGG	8 cut(s)	65, 135, 142, 311, 416, 789, 1161, 2135
BmsI	GCATC	8 cut(s)	361, 916, 985, 1487, 1674, 1756, 1797, 2005
BmtI	GCTAGC	1 cut(s)	2033
BpiI	GAAGAC	3 cut(s)	550, 1712, 2064
BpmI	CTGGAG	1 cut(s)	1841
Bpu10I	CCTNAGC	1 cut(s)	670
Bpu14I	TTCGAA	1 cut(s)	697
BpuEI	CTTGAG	1 cut(s)	895
BpuMI	CCSGG	1 cut(s)	65
BsaAI	YACGTR	1 cut(s)	733
BsaBI	GATNNNNATC	1 cut(s)	2189
BsaHI	GRCGYC	2 cut(s)	168, 1165
BsaI	GGTCTC	1 cut(s)	948
BsaJI	CCNNGG	7 cut(s)	63, 133, 1425, 1841, 2133, 2134, 2157
BsaWI	WCCGGW	1 cut(s)	1267
BsaXI	ACNNNNNCTCC	2 cut(s)	172, 202
Bsc4I	CCNNNNNNNGG	5 cut(s)	794, 1155, 1469, 1901, 2140
Bse118I	RCCGGY	2 cut(s)	5, 9
Bse1I	ACTGG	4 cut(s)	265, 799, 1397, 1824
Bse21I	CCTNAGG	1 cut(s)	297
Bse3DI	GCAATG	1 cut(s)	216
Bse8I	GATNNNNATC	1 cut(s)	2189
BseAI	TCCGGA	1 cut(s)	1267
BseBI	CCWGG	7 cut(s)	135, 142, 311, 416, 789, 1161, 2135
BseDI	CCNNGG	7 cut(s)	63, 133, 1425, 1841, 2133, 2134, 2157
BseJI	GATNNNNATC	1 cut(s)	2189
BseLI	CCNNNNNNNGG	5 cut(s)	794, 1155, 1469, 1901, 2140
BseMI	GCAATG	1 cut(s)	216
BseMII	CTCAG	3 cut(s)	288, 921, 1695
BseNI	ACTGG	4 cut(s)	265, 799, 1397, 1824
BseRI	GAGGAG	1 cut(s)	180
BseSI	GKGCMC	1 cut(s)	1744
BseX3I	CGGCCG	1 cut(s)	7
BsgI	GTGCAG	3 cut(s)	1338, 1365, 1629
Bsh1236I	CGCG	1 cut(s)	38
Bsh1285I	CGRYCG	1 cut(s)	10
BshFI	GGCC	8 cut(s)	5, 9, 95, 784, 864, 1159, 1623, 2081
BshNI	GGYRCC	1 cut(s)	137
BsiEI	CGRYCG	1 cut(s)	10
BsiHKAI	GWGCWC	2 cut(s)	1256, 1733
BsiSI	CCGG	4 cut(s)	6, 10, 65, 1268
BslFI	GGGAC	2 cut(s)	364, 513
BslI	CCNNNNNNNGG	5 cut(s)	794, 1155, 1469, 1901, 2140
BsmAI	GTCTC	5 cut(s)	190, 557, 948, 1095, 1700
BsmFI	GGGAC	2 cut(s)	364, 513
BsnI	GGCC	8 cut(s)	5, 9, 95, 784, 864, 1159, 1623, 2081
Bso31I	GGTCTC	1 cut(s)	948
Bsp119I	TTCGAA	1 cut(s)	697
Bsp1286I	GDGCHC	3 cut(s)	1256, 1733, 1744
Bsp13I	TCCGGA	1 cut(s)	1267
Bsp19I	CCATGG	1 cut(s)	1425
BspACI	CCGC	5 cut(s)	36, 241, 293, 1292, 2072
BspANI	GGCC	8 cut(s)	5, 9, 95, 784, 864, 1159, 1623, 2081
BspCNI	CTCAG	3 cut(s)	289, 922, 1696
BspEI	TCCGGA	1 cut(s)	1267
BspFNI	CGCG	1 cut(s)	38
BspHI	TCATGA	2 cut(s)	1042, 1723
BspLI	GGNNCC	2 cut(s)	139, 1474
BspMAI	CTGCAG	1 cut(s)	73
BspMI	ACCTGC	3 cut(s)	273, 1471, 2014
BspOI	GCTAGC	1 cut(s)	2033
BspPI	GGATC	4 cut(s)	758, 921, 1024, 2158
BspQI	GCTCTTC	1 cut(s)	694
BspT104I	TTCGAA	1 cut(s)	697
BspT107I	GGYRCC	1 cut(s)	137
BspTNI	GGTCTC	1 cut(s)	948
BsrDI	GCAATG	1 cut(s)	216
BsrFI	RCCGGY	2 cut(s)	5, 9
BsrI	ACTGG	4 cut(s)	265, 799, 1397, 1824
BssAI	RCCGGY	2 cut(s)	5, 9
BssECI	CCNNGG	7 cut(s)	63, 133, 1425, 1841, 2133, 2134, 2157
BssNI	GRCGYC	2 cut(s)	168, 1165
BssT1I	CCWWGG	1 cut(s)	1425
Bst2UI	CCWGG	7 cut(s)	135, 142, 311, 416, 789, 1161, 2135
Bst4CI	ACNGT	7 cut(s)	184, 478, 1049, 1660, 1673, 1872, 2037
Bst6I	CTCTTC	3 cut(s)	34, 694, 1401
BstACI	GRCGYC	2 cut(s)	168, 1165
BstBAI	YACGTR	1 cut(s)	733
BstBI	TTCGAA	1 cut(s)	697
BstC8I	GCNNGC	7 cut(s)	7, 104, 246, 1290, 1297, 1443, 2031
BstDEI	CTNAG	4 cut(s)	297, 670, 930, 1704
BstDSI	CCRYGG	1 cut(s)	1425
BstFNI	CGCG	1 cut(s)	38
BstH2I	RGCGCY	2 cut(s)	317, 1891
BstHHI	GCGC	3 cut(s)	223, 316, 1890
BstMAI	GTCTC	5 cut(s)	190, 557, 948, 1095, 1700
BstMCI	CGRYCG	1 cut(s)	10
BstNI	CCWGG	7 cut(s)	135, 142, 311, 416, 789, 1161, 2135
BstNSI	RCATGY	5 cut(s)	248, 761, 974, 1445, 1611
BstSCI	CCNGG	8 cut(s)	63, 133, 140, 309, 414, 787, 1159, 2133
BstSFI	CTRYAG	4 cut(s)	69, 492, 1214, 1309
BstSLI	GKGCMC	1 cut(s)	1744
BstUI	CGCG	1 cut(s)	38
BstV2I	GAAGAC	3 cut(s)	550, 1712, 2064
BstX2I	RGATCY	3 cut(s)	73, 913, 2150
BstXI	CCANNNNNNTGG	1 cut(s)	1399
BstYI	RGATCY	3 cut(s)	73, 913, 2150
BstZI	CGGCCG	1 cut(s)	7
Bsu36I	CCTNAGG	1 cut(s)	297
BsuRI	GGCC	8 cut(s)	5, 9, 95, 784, 864, 1159, 1623, 2081
BtgI	CCRYGG	1 cut(s)	1425
BtsI	GCAGTG	1 cut(s)	1639
BtsIMutI	CAGTG	9 cut(s)	180, 258, 276, 474, 1404, 1479, 1639, 1678, 1868
BveI	ACCTGC	3 cut(s)	273, 1471, 2014
Cac8I	GCNNGC	7 cut(s)	7, 104, 246, 1290, 1297, 1443, 2031
CaiI	CAGNNNCTG	2 cut(s)	275, 1658
CciI	TCATGA	2 cut(s)	1042, 1723
CfoI	GCGC	3 cut(s)	223, 316, 1890
Cfr10I	RCCGGY	2 cut(s)	5, 9
Cfr13I	GGNCC	6 cut(s)	782, 863, 1622, 1838, 1876, 2080
CseI	GACGC	1 cut(s)	176
CsiI	ACCWGGT	2 cut(s)	414, 787
Csp6I	GTAC	3 cut(s)	792, 1032, 1460
CviQI	GTAC	3 cut(s)	792, 1032, 1460
DdeI	CTNAG	4 cut(s)	297, 670, 930, 1704
DraI	TTTAAA	1 cut(s)	1752
DrdI	GACNNNNNNGTC	1 cut(s)	173
DseDI	GACNNNNNNGTC	1 cut(s)	173
EaeI	YGGCCR	2 cut(s)	3, 7
EagI	CGGCCG	1 cut(s)	7
Eam1104I	CTCTTC	3 cut(s)	34, 694, 1401
EarI	CTCTTC	3 cut(s)	34, 694, 1401
EciI	GGCGGA	1 cut(s)	282
Ecl136II	GAGCTC	1 cut(s)	1254
EclXI	CGGCCG	1 cut(s)	7
Eco130I	CCWWGG	1 cut(s)	1425
Eco24I	GRGCYC	1 cut(s)	1256
Eco31I	GGTCTC	1 cut(s)	948
Eco47I	GGWCC	2 cut(s)	1838, 1876
Eco52I	CGGCCG	1 cut(s)	7
Eco53kI	GAGCTC	1 cut(s)	1254
Eco57I	CTGAAG	3 cut(s)	888, 1904, 2198
Eco72I	CACGTG	1 cut(s)	733
Eco81I	CCTNAGG	1 cut(s)	297
EcoICRI	GAGCTC	1 cut(s)	1254
EcoO109I	RGGNCCY	2 cut(s)	1622, 2080
EcoRII	CCWGG	7 cut(s)	133, 140, 309, 414, 787, 1159, 2133
EcoT14I	CCWWGG	1 cut(s)	1425
EcoT22I	ATGCAT	1 cut(s)	1771
EcoT38I	GRGCYC	1 cut(s)	1256
ErhI	CCWWGG	1 cut(s)	1425
FaqI	GGGAC	2 cut(s)	364, 513
FauI	CCCGC	1 cut(s)	43
FbaI	TGATCA	1 cut(s)	937
FblI	GTMKAC	1 cut(s)	1213
FriOI	GRGCYC	1 cut(s)	1256
FseI	GGCCGGCC	1 cut(s)	9
FspBI	CTAG	8 cut(s)	249, 326, 1023, 1565, 1626, 1649, 1949, 2030
GlaI	GCGC	3 cut(s)	222, 315, 1889
GsuI	CTGGAG	1 cut(s)	1841
HaeII	RGCGCY	2 cut(s)	317, 1891
HaeIII	GGCC	8 cut(s)	5, 9, 95, 784, 864, 1159, 1623, 2081
HapII	CCGG	4 cut(s)	6, 10, 65, 1268
HgaI	GACGC	1 cut(s)	176
HhaI	GCGC	3 cut(s)	223, 316, 1890
Hin1I	GRCGYC	2 cut(s)	168, 1165
Hin6I	GCGC	3 cut(s)	221, 314, 1888
HinP1I	GCGC	3 cut(s)	221, 314, 1888
HindIII	AAGCTT	1 cut(s)	1910
HinfI	GANTC	4 cut(s)	266, 1088, 1219, 1952
HpaII	CCGG	4 cut(s)	6, 10, 65, 1268
HphI	GGTGA	6 cut(s)	46, 686, 902, 1538, 1770, 2150
Hpy166II	GTNNAC	5 cut(s)	258, 362, 1057, 1214, 1276
Hpy188I	TCNGA	4 cut(s)	1389, 1842, 1884, 1899
Hpy8I	GTNNAC	5 cut(s)	258, 362, 1057, 1214, 1276
Hpy99I	CGWCG	2 cut(s)	164, 170
HpyCH4III	ACNGT	7 cut(s)	184, 478, 1049, 1660, 1673, 1872, 2037
HpyCH4IV	ACGT	2 cut(s)	732, 1165
HpyF3I	CTNAG	4 cut(s)	297, 670, 930, 1704
HpySE526I	ACGT	2 cut(s)	732, 1165
Hsp92I	GRCGYC	2 cut(s)	168, 1165
HspAI	GCGC	3 cut(s)	221, 314, 1888
Kpn2I	TCCGGA	1 cut(s)	1267
KroI	GCCGGC	1 cut(s)	5
KroNI	GCCGGC	1 cut(s)	7
Ksp22I	TGATCA	1 cut(s)	937
LguI	GCTCTTC	1 cut(s)	694
LmnI	GCTCC	3 cut(s)	1270, 1472, 1570
LweI	GCATC	8 cut(s)	361, 916, 985, 1487, 1674, 1756, 1797, 2005
MabI	ACCWGGT	2 cut(s)	414, 787
MaeI	CTAG	8 cut(s)	249, 326, 1023, 1565, 1626, 1649, 1949, 2030
MaeII	ACGT	2 cut(s)	732, 1165
MaeIII	GTNAC	9 cut(s)	52, 212, 674, 733, 1420, 1603, 1776, 1815, 1981
MflI	RGATCY	3 cut(s)	73, 913, 2150
MhlI	GDGCHC	3 cut(s)	1256, 1733, 1744
MlyI	GAGTC	1 cut(s)	1097
MmeI	TCCRAC	1 cut(s)	259
Mph1103I	ATGCAT	1 cut(s)	1771
MroI	TCCGGA	1 cut(s)	1267
MroNI	GCCGGC	1 cut(s)	5
MroXI	GAANNNNTTC	1 cut(s)	2061
MspI	CCGG	4 cut(s)	6, 10, 65, 1268
MspR9I	CCNGG	8 cut(s)	65, 135, 142, 311, 416, 789, 1161, 2135
MvaI	CCWGG	7 cut(s)	135, 142, 311, 416, 789, 1161, 2135
MvnI	CGCG	1 cut(s)	38
NaeI	GCCGGC	1 cut(s)	7
NciI	CCSGG	1 cut(s)	65
NcoI	CCATGG	1 cut(s)	1425
NgoMIV	GCCGGC	1 cut(s)	5
NheI	GCTAGC	1 cut(s)	2029
NlaIV	GGNNCC	2 cut(s)	139, 1474
NmeAIII	GCCGAG	1 cut(s)	2182
NmuCI	GTSAC	6 cut(s)	52, 212, 674, 733, 1776, 1981
NsiI	ATGCAT	1 cut(s)	1771
NspI	RCATGY	5 cut(s)	248, 761, 974, 1445, 1611
NspV	TTCGAA	1 cut(s)	697
PaeI	GCATGC	2 cut(s)	248, 1445
PagI	TCATGA	2 cut(s)	1042, 1723
PaqCI	CACCTGC	1 cut(s)	2014
PasI	CCCWGGG	1 cut(s)	2134
PciSI	GCTCTTC	1 cut(s)	694
PdiI	GCCGGC	1 cut(s)	7
PdmI	GAANNNNTTC	1 cut(s)	2061
PfeI	GAWTC	3 cut(s)	266, 1219, 1952
PleI	GAGTC	1 cut(s)	1096
PmaCI	CACGTG	1 cut(s)	733
PmlI	CACGTG	1 cut(s)	733
PpsI	GAGTC	1 cut(s)	1096
Ppu21I	YACGTR	1 cut(s)	733
PshBI	ATTAAT	1 cut(s)	462
Psp124BI	GAGCTC	1 cut(s)	1256
Psp6I	CCWGG	7 cut(s)	133, 140, 309, 414, 787, 1159, 2133
PspCI	CACGTG	1 cut(s)	733
PspGI	CCWGG	7 cut(s)	133, 140, 309, 414, 787, 1159, 2133
PspN4I	GGNNCC	2 cut(s)	139, 1474
PspPI	GGNCC	6 cut(s)	782, 863, 1622, 1838, 1876, 2080
PstI	CTGCAG	1 cut(s)	73
PstNI	CAGNNNCTG	2 cut(s)	275, 1658
PsuI	RGATCY	3 cut(s)	73, 913, 2150
RigI	GGCCGGCC	1 cut(s)	9
RsaI	GTAC	3 cut(s)	793, 1033, 1461
RsaNI	GTAC	3 cut(s)	792, 1032, 1460
SacI	GAGCTC	1 cut(s)	1256
SapI	GCTCTTC	1 cut(s)	694
Sau96I	GGNCC	6 cut(s)	782, 863, 1622, 1838, 1876, 2080
SchI	GAGTC	1 cut(s)	1097
ScrFI	CCNGG	8 cut(s)	65, 135, 142, 311, 416, 789, 1161, 2135
SduI	GDGCHC	3 cut(s)	1256, 1733, 1744
SexAI	ACCWGGT	2 cut(s)	414, 787
SfaNI	GCATC	8 cut(s)	361, 916, 985, 1487, 1674, 1756, 1797, 2005
SfcI	CTRYAG	4 cut(s)	69, 492, 1214, 1309
SfuI	TTCGAA	1 cut(s)	697
SinI	GGWCC	2 cut(s)	1838, 1876
SmlI	CTYRAG	1 cut(s)	874
SmoI	CTYRAG	1 cut(s)	874
SphI	GCATGC	2 cut(s)	248, 1445
SsiI	CCGC	5 cut(s)	36, 241, 293, 1292, 2072
SspMI	CTAG	8 cut(s)	249, 326, 1023, 1565, 1626, 1649, 1949, 2030
SstI	GAGCTC	1 cut(s)	1256
StyD4I	CCNGG	8 cut(s)	63, 133, 140, 309, 414, 787, 1159, 2133
StyI	CCWWGG	1 cut(s)	1425
TaaI	ACNGT	7 cut(s)	184, 478, 1049, 1660, 1673, 1872, 2037
TaiI	ACGT	2 cut(s)	735, 1168
TaqI	TCGA	7 cut(s)	561, 697, 1140, 1531, 1668, 1800, 2227
TauI	GCSGC	3 cut(s)	244, 1295, 2075
TfiI	GAWTC	3 cut(s)	266, 1219, 1952
TscAI	CASTG	9 cut(s)	187, 265, 276, 481, 1404, 1486, 1639, 1678, 1875
TseFI	GTSAC	6 cut(s)	52, 212, 674, 733, 1776, 1981
Tsp45I	GTSAC	6 cut(s)	52, 212, 674, 733, 1776, 1981
TspGWI	ACGGA	1 cut(s)	148
TspRI	CASTG	9 cut(s)	187, 265, 276, 481, 1404, 1486, 1639, 1678, 1875
VpaK11BI	GGWCC	2 cut(s)	1838, 1876
VspI	ATTAAT	1 cut(s)	462
XapI	RAATTY	3 cut(s)	638, 1227, 1746
XceI	RCATGY	5 cut(s)	248, 761, 974, 1445, 1611
XcmI	CCANNNNNNNNNTGG	1 cut(s)	148
XmiI	GTMKAC	1 cut(s)	1213
XmnI	GAANNNNTTC	1 cut(s)	2061
XspI	CTAG	8 cut(s)	249, 326, 1023, 1565, 1626, 1649, 1949, 2030
ZraI	GACGTC	1 cut(s)	1166
Zsp2I	ATGCAT	1 cut(s)	1771

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.