Rh4CG235100

Vesicle-fusing

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
47866415 .. 47878604
12190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG235100.1

Sequence Viewer

Length: 1317 bp
ATGGCTCCGGCGACGATGATCGTCACCAACACTCCGGCCGCCGATCTTGCTCTCACCTACTTCTCACCGATCGATCTCCAGACCTTCGCCATTCCCGGCACCAAGCTCAACCCAGCTCTAATCGCCGACTCGGTTTCTAGCGGTGACTTATTATCTGTGAGCAGGTTTACTCCGCCTGATGATTTCAACCTGACTGTGCTCACTCTGGAATTGGAGTTGGTGAAAAAAGGGACTAAGAGTGAACAGATTGATGCTGTTGCCTTGTGGAGCCAACTTAAAAAGAGGTTTATCAACCAGGTTATGGCAGCTGGACAAAGAGTGTCATTTCAGTACCATGGGACTATTTACATTTTTACAGTCAATCAAGCTTGGAAATGGAATAAAGTGAGATTGTTTTCAAATGATATCAGCCTCAGTATTTTTAAGATTGTGAACCAATGTTCTGATACGACTACCAATATCTTTAAGCACAAGGAATTCAATCTTCAAACACTTGGCATTGGTGGCTTAGGTGCTGAGTTTGCAGATATATTTCGAAGAGCTTTTGCCTCCCGTATCTTCCCTGCACATGTTACAAATAAACTAGGGCTCAAGCATGTGAAGGGTATGCTGCTTTATGGACCACCTGGAGATGAAAGTGAATTGCATGTCATAATCTCTGATGAAGTCAGTGCTATTTTTAGTTACAAAGAACTGGAAGGTGTTGTTAAAAGTGCAGTATCATTTGCTTTGAATAGACAACTAAGTTTGGATGATCTTACCAAGCCATATCTTACCAAACCAGTAGATGTAGCGAGTATTAAGGTTACTAGGGATGATTTTCTACGTGCACTCCATGATATTGTACCTGCAGTTGGAGCCTCCGCTGATGACCTTGAAAGATGCAGACTTCATGGCATGGTAAGCCCACTTGTTACATGCCTTCTGGAAAGTCCTAGTGGCAGTGGTAAATCTTCACTAGCAGCAACTGTTGGCATCAACAGTGATTTCCCCTTTGTTAAGATTGTTACTAGAGTATATTGCTATTGGTCCGAGCGCACTCCAAAGATCAATCCAGATTATCGCAAATTTCGTGACGTTGGAATTAGTCCTGAAATGATGGCTGTTTATGATAACATGTTTAGGGGTAGCACAACCCTAGGTCACTCTGTCATGATTCCCTCAGCTACTATAGATATTGAAGAGGTGGTGGAGGATTCTGAGCATAATGACATTTCTGGAGATGATGAGGAGATGGACCAGCAAGGTGAACCAAGAGGGAAAAAGAGAAAAACTGTGGAGTGCCAAACTGGGCGTAATAAAGAAAAAAAAAGATAA

Protein Analysis

438

Amino Acids

48.58

Weight (kDa)

6.34

Isoelectric Point (pI)

29.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 153, 856
AccB1I GGYRCC 1 cut(s) 98
AccB7I CCANNNNNTGG 1 cut(s) 301
AciI CCGC 4 cut(s) 39, 141, 173, 864
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 2 cut(s) 476, 1067
AfaI GTAC 2 cut(s) 332, 846
AfiI CCNNNNNNNGG 2 cut(s) 301, 854
AflIII ACRYGT 2 cut(s) 568, 1116
AgsI TTSAA 7 cut(s) 187, 399, 481, 488, 733, 878, 1181
AjnI CCWGG 2 cut(s) 294, 625
AluBI AGCT 6 cut(s) 106, 116, 308, 368, 542, 1166
AluI AGCT 6 cut(s) 106, 116, 308, 368, 542, 1166
Alw21I GWGCWC 2 cut(s) 201, 832
Alw44I GTGCAC 1 cut(s) 828
AlwNI CAGNNNCTG 1 cut(s) 968
AoxI GGCC 1 cut(s) 36
ApaLI GTGCAC 1 cut(s) 828
ApeKI GCWGC 3 cut(s) 305, 610, 962
ApoI RAATTY 2 cut(s) 476, 1067
AspA2I CCTAGG 1 cut(s) 1138
AspLEI GCGC 1 cut(s) 1038
AspS9I GGNCC 3 cut(s) 620, 1029, 1237
AsuC2I CCSGG 1 cut(s) 96
AsuHPI GGTGA 6 cut(s) 16, 46, 57, 155, 232, 1259
AsuII TTCGAA 1 cut(s) 535
AvaII GGWCC 3 cut(s) 620, 1029, 1237
AvrII CCTAGG 1 cut(s) 1138
BaeGI GKGCMC 1 cut(s) 832
BanI GGYRCC 1 cut(s) 98
BanII GRGCYC 1 cut(s) 591
Bbv12I GWGCWC 2 cut(s) 201, 832
BbvCI CCTCAGC 1 cut(s) 1162
BbvI GCAGC 3 cut(s) 317, 597, 974
BccI CCATC 2 cut(s) 1093, 1228
BciT130I CCWGG 2 cut(s) 296, 627
BcnI CCSGG 1 cut(s) 96
BfaI CTAG 7 cut(s) 138, 584, 810, 936, 959, 1011, 1139
BfmI CTRYAG 2 cut(s) 849, 1170
BfuAI ACCTGC 2 cut(s) 153, 856
BisI GCNGC 4 cut(s) 39, 306, 611, 963
BlnI CCTAGG 1 cut(s) 1138
BlsI GCNGC 4 cut(s) 40, 307, 612, 964
Bme1390I CCNGG 3 cut(s) 96, 296, 627
Bme18I GGWCC 3 cut(s) 620, 1029, 1237
BmgT120I GGNCC 3 cut(s) 620, 1029, 1237
BmiI GGNNCC 4 cut(s) 6, 100, 269, 859
BmrFI CCNGG 3 cut(s) 96, 296, 627
BmrI ACTGGG 1 cut(s) 1299
BmsI GCATC 3 cut(s) 241, 872, 984
BmuI ACTGGG 1 cut(s) 1299
BpmI CTGGAG 3 cut(s) 62, 648, 1239
Bpu10I CCTNAGC 2 cut(s) 508, 1162
Bpu14I TTCGAA 1 cut(s) 535
BpuEI CTTGAG 1 cut(s) 575
BpuMI CCSGG 1 cut(s) 96
Bsa29I ATCGAT 1 cut(s) 72
BsaAI YACGTR 1 cut(s) 827
BsaJI CCNNGG 2 cut(s) 334, 1138
BsaXI ACNNNNNCTCC 4 cut(s) 16, 46, 816, 846
Bsc4I CCNNNNNNNGG 2 cut(s) 301, 854
Bse1I ACTGG 3 cut(s) 699, 782, 1294
BseBI CCWGG 2 cut(s) 296, 627
BseCI ATCGAT 1 cut(s) 72
BseDI CCNNGG 2 cut(s) 334, 1138
BseGI GGATG 2 cut(s) 757, 820
BseLI CCNNNNNNNGG 2 cut(s) 301, 854
BseMII CTCAG 4 cut(s) 427, 507, 1176, 1191
BseNI ACTGG 3 cut(s) 699, 782, 1294
BseRI GAGGAG 1 cut(s) 1244
BseSI GKGCMC 1 cut(s) 832
BseX3I CGGCCG 1 cut(s) 36
BseXI GCAGC 3 cut(s) 317, 597, 974
BseYI CCCAGC 1 cut(s) 112
BsgI GTGCAG 2 cut(s) 549, 735
Bsh1285I CGRYCG 2 cut(s) 39, 72
BshFI GGCC 1 cut(s) 38
BshNI GGYRCC 1 cut(s) 98
BshVI ATCGAT 1 cut(s) 72
BsiEI CGRYCG 2 cut(s) 39, 72
BsiHKAI GWGCWC 2 cut(s) 201, 832
BsiSI CCGG 3 cut(s) 8, 35, 96
BslFI GGGAC 2 cut(s) 244, 352
BslI CCNNNNNNNGG 2 cut(s) 301, 854
BsmFI GGGAC 2 cut(s) 244, 352
BsnI GGCC 1 cut(s) 38
Bsp119I TTCGAA 1 cut(s) 535
Bsp1286I GDGCHC 3 cut(s) 201, 591, 832
Bsp143I GATC 6 cut(s) 18, 43, 69, 73, 754, 1047
Bsp19I CCATGG 1 cut(s) 334
BspACI CCGC 4 cut(s) 39, 141, 173, 864
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 4 cut(s) 426, 508, 1175, 1192
BspDI ATCGAT 1 cut(s) 72
BspHI TCATGA 1 cut(s) 1152
BspLI GGNNCC 4 cut(s) 6, 100, 269, 859
BspMAI CTGCAG 1 cut(s) 853
BspMI ACCTGC 2 cut(s) 153, 856
BspQI GCTCTTC 1 cut(s) 532
BspT104I TTCGAA 1 cut(s) 535
BspT107I GGYRCC 1 cut(s) 98
BsrI ACTGG 3 cut(s) 699, 782, 1294
BssECI CCNNGG 2 cut(s) 334, 1138
BssMI GATC 6 cut(s) 18, 43, 69, 73, 754, 1047
BssT1I CCWWGG 2 cut(s) 334, 1138
Bst2UI CCWGG 2 cut(s) 296, 627
Bst4CI ACNGT 5 cut(s) 196, 358, 970, 983, 1276
Bst6I CTCTTC 2 cut(s) 532, 1176
BstBAI YACGTR 1 cut(s) 827
BstBI TTCGAA 1 cut(s) 535
BstDEI CTNAG 7 cut(s) 234, 413, 508, 516, 743, 1162, 1200
BstDSI CCRYGG 1 cut(s) 334
BstF5I GGATG 2 cut(s) 757, 820
BstHHI GCGC 1 cut(s) 1038
BstKTI GATC 6 cut(s) 21, 46, 72, 76, 757, 1050
BstMBI GATC 6 cut(s) 18, 43, 69, 73, 754, 1047
BstMCI CGRYCG 2 cut(s) 39, 72
BstMWI GCNNNNNNNGC 6 cut(s) 47, 122, 504, 521, 857, 903
BstNI CCWGG 2 cut(s) 296, 627
BstNSI RCATGY 5 cut(s) 572, 599, 650, 921, 1120
BstSCI CCNGG 3 cut(s) 94, 294, 625
BstSFI CTRYAG 2 cut(s) 849, 1170
BstSLI GKGCMC 1 cut(s) 832
BstV1I GCAGC 3 cut(s) 317, 597, 974
BstZI CGGCCG 1 cut(s) 36
Bsu15I ATCGAT 1 cut(s) 72
BsuRI GGCC 1 cut(s) 38
BsuTUI ATCGAT 1 cut(s) 72
BtgI CCRYGG 1 cut(s) 334
BtsCI GGATG 2 cut(s) 757, 820
BtsI GCAGTG 1 cut(s) 949
BtsIMutI CAGTG 3 cut(s) 676, 949, 988
BveI ACCTGC 2 cut(s) 153, 856
CaiI CAGNNNCTG 1 cut(s) 968
CciI TCATGA 1 cut(s) 1152
CfoI GCGC 1 cut(s) 1038
Cfr13I GGNCC 3 cut(s) 620, 1029, 1237
ClaI ATCGAT 1 cut(s) 72
CsiI ACCWGGT 1 cut(s) 294
Csp6I GTAC 2 cut(s) 331, 845
CviQI GTAC 2 cut(s) 331, 845
DdeI CTNAG 7 cut(s) 234, 413, 508, 516, 743, 1162, 1200
DpnI GATC 6 cut(s) 20, 45, 71, 75, 756, 1049
DpnII GATC 6 cut(s) 18, 43, 69, 73, 754, 1047
EaeI YGGCCR 1 cut(s) 36
EagI CGGCCG 1 cut(s) 36
Eam1104I CTCTTC 2 cut(s) 532, 1176
EarI CTCTTC 2 cut(s) 532, 1176
EciI GGCGGA 1 cut(s) 162
EclXI CGGCCG 1 cut(s) 36
Eco130I CCWWGG 2 cut(s) 334, 1138
Eco24I GRGCYC 1 cut(s) 591
Eco32I GATATC 1 cut(s) 406
Eco47I GGWCC 3 cut(s) 620, 1029, 1237
Eco52I CGGCCG 1 cut(s) 36
EcoRI GAATTC 1 cut(s) 476
EcoRII CCWGG 2 cut(s) 294, 625
EcoRV GATATC 1 cut(s) 406
EcoT14I CCWWGG 2 cut(s) 334, 1138
EcoT38I GRGCYC 1 cut(s) 591
ErhI CCWWGG 2 cut(s) 334, 1138
FaqI GGGAC 2 cut(s) 244, 352
Fnu4HI GCNGC 4 cut(s) 39, 306, 611, 963
FokI GGATG 2 cut(s) 764, 827
FriOI GRGCYC 1 cut(s) 591
Fsp4HI GCNGC 4 cut(s) 39, 306, 611, 963
FspBI CTAG 7 cut(s) 138, 584, 810, 936, 959, 1011, 1139
GlaI GCGC 1 cut(s) 1037
GluI GCNGC 4 cut(s) 39, 306, 611, 963
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 3 cut(s) 62, 648, 1239
HaeIII GGCC 1 cut(s) 38
HapII CCGG 3 cut(s) 8, 35, 96
HhaI GCGC 1 cut(s) 1038
Hin6I GCGC 1 cut(s) 1036
HinP1I GCGC 1 cut(s) 1036
HindIII AAGCTT 1 cut(s) 366
HinfI GANTC 3 cut(s) 128, 1156, 1196
HpaII CCGG 3 cut(s) 8, 35, 96
HphI GGTGA 6 cut(s) 16, 46, 57, 155, 232, 1259
Hpy166II GTNNAC 5 cut(s) 168, 242, 433, 830, 1250
Hpy188I TCNGA 4 cut(s) 445, 661, 1033, 1201
Hpy188III TCNNGA 8 cut(s) 79, 206, 926, 1055, 1073, 1091, 1153, 1218
Hpy8I GTNNAC 5 cut(s) 168, 242, 433, 830, 1250
Hpy99I CGWCG 1 cut(s) 16
HpyAV CCTTC 4 cut(s) 94, 595, 692, 932
HpyCH4III ACNGT 5 cut(s) 196, 358, 970, 983, 1276
HpyCH4IV ACGT 2 cut(s) 826, 1077
HpyCH4V TGCA 7 cut(s) 524, 566, 646, 716, 830, 851, 885
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 122, 504, 521, 857, 903
HpyF3I CTNAG 7 cut(s) 234, 413, 508, 516, 743, 1162, 1200
HpySE526I ACGT 2 cut(s) 826, 1077
HspAI GCGC 1 cut(s) 1036
Kzo9I GATC 6 cut(s) 18, 43, 69, 73, 754, 1047
LguI GCTCTTC 1 cut(s) 532
LmnI GCTCC 3 cut(s) 10, 267, 857
Lsp1109I GCAGC 3 cut(s) 317, 597, 974
LweI GCATC 3 cut(s) 241, 872, 984
MabI ACCWGGT 1 cut(s) 294
MaeI CTAG 7 cut(s) 138, 584, 810, 936, 959, 1011, 1139
MaeII ACGT 2 cut(s) 826, 1077
MaeIII GTNAC 9 cut(s) 22, 143, 571, 683, 805, 913, 1006, 1073, 1142
MalI GATC 6 cut(s) 20, 45, 71, 75, 756, 1049
MboI GATC 6 cut(s) 18, 43, 69, 73, 754, 1047
MboII GAAGA 5 cut(s) 476, 549, 550, 945, 1193
MhlI GDGCHC 3 cut(s) 201, 591, 832
MluCI AATT 5 cut(s) 209, 476, 641, 1067, 1083
MlyI GAGTC 1 cut(s) 122
MmeI TCCRAC 2 cut(s) 835, 1060
MnlI CCTC 9 cut(s) 276, 422, 559, 871, 1171, 1177, 1186, 1222, 1250
MseI TTAA 6 cut(s) 276, 423, 465, 708, 801, 999
MspA1I CMGCKG 2 cut(s) 308, 866
MspI CCGG 3 cut(s) 8, 35, 96
MspR9I CCNGG 3 cut(s) 96, 296, 627
MvaI CCWGG 2 cut(s) 296, 627
MwoI GCNNNNNNNGC 6 cut(s) 47, 122, 504, 521, 857, 903
NciI CCSGG 1 cut(s) 96
NcoI CCATGG 1 cut(s) 334
NdeII GATC 6 cut(s) 18, 43, 69, 73, 754, 1047
NlaIV GGNNCC 4 cut(s) 6, 100, 269, 859
NmuCI GTSAC 4 cut(s) 22, 143, 1073, 1142
NspI RCATGY 5 cut(s) 572, 599, 650, 921, 1120
NspV TTCGAA 1 cut(s) 535
PagI TCATGA 1 cut(s) 1152
PciI ACATGT 2 cut(s) 568, 1116
PciSI GCTCTTC 1 cut(s) 532
PcsI WCGNNNNNNNCGW 1 cut(s) 1069
PfeI GAWTC 2 cut(s) 1156, 1196
PflMI CCANNNNNTGG 1 cut(s) 301
PkrI GCNGC 4 cut(s) 40, 307, 612, 964
Ple19I CGATCG 1 cut(s) 72
PleI GAGTC 1 cut(s) 122
PpsI GAGTC 1 cut(s) 122
Ppu21I YACGTR 1 cut(s) 827
PscI ACATGT 2 cut(s) 568, 1116
Psp6I CCWGG 2 cut(s) 294, 625
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 2 cut(s) 294, 625
PspN4I GGNNCC 4 cut(s) 6, 100, 269, 859
PspPI GGNCC 3 cut(s) 620, 1029, 1237
PstI CTGCAG 1 cut(s) 853
PstNI CAGNNNCTG 1 cut(s) 968
PvuI CGATCG 1 cut(s) 72
PvuII CAGCTG 1 cut(s) 308
RsaI GTAC 2 cut(s) 332, 846
RsaNI GTAC 2 cut(s) 331, 845
SapI GCTCTTC 1 cut(s) 532
SaqAI TTAA 6 cut(s) 276, 423, 465, 708, 801, 999
SatI GCNGC 4 cut(s) 39, 306, 611, 963
Sau3AI GATC 6 cut(s) 18, 43, 69, 73, 754, 1047
Sau96I GGNCC 3 cut(s) 620, 1029, 1237
SchI GAGTC 1 cut(s) 122
ScrFI CCNGG 3 cut(s) 96, 296, 627
SduI GDGCHC 3 cut(s) 201, 591, 832
SexAI ACCWGGT 1 cut(s) 294
SfaNI GCATC 3 cut(s) 241, 872, 984
SfcI CTRYAG 2 cut(s) 849, 1170
SfuI TTCGAA 1 cut(s) 535
SinI GGWCC 3 cut(s) 620, 1029, 1237
SmlI CTYRAG 1 cut(s) 590
SmoI CTYRAG 1 cut(s) 590
Sse9I AATT 5 cut(s) 209, 476, 641, 1067, 1083
SsiI CCGC 4 cut(s) 39, 141, 173, 864
SspMI CTAG 7 cut(s) 138, 584, 810, 936, 959, 1011, 1139
StyD4I CCNGG 3 cut(s) 94, 294, 625
StyI CCWWGG 2 cut(s) 334, 1138
TaaI ACNGT 5 cut(s) 196, 358, 970, 983, 1276
TaiI ACGT 2 cut(s) 829, 1080
TaqI TCGA 2 cut(s) 72, 535
TasI AATT 5 cut(s) 209, 476, 641, 1067, 1083
TauI GCSGC 1 cut(s) 41
TfiI GAWTC 2 cut(s) 1156, 1196
Tru1I TTAA 6 cut(s) 276, 423, 465, 708, 801, 999
Tru9I TTAA 6 cut(s) 276, 423, 465, 708, 801, 999
TscAI CASTG 3 cut(s) 676, 949, 988
TseFI GTSAC 4 cut(s) 22, 143, 1073, 1142
TseI GCWGC 3 cut(s) 305, 610, 962
Tsp45I GTSAC 4 cut(s) 22, 143, 1073, 1142
TspDTI ATGAA 3 cut(s) 648, 678, 881
TspRI CASTG 3 cut(s) 676, 949, 988
Van91I CCANNNNNTGG 1 cut(s) 301
VneI GTGCAC 1 cut(s) 828
VpaK11BI GGWCC 3 cut(s) 620, 1029, 1237
XapI RAATTY 2 cut(s) 476, 1067
XceI RCATGY 5 cut(s) 572, 599, 650, 921, 1120
XmaJI CCTAGG 1 cut(s) 1138
XspI CTAG 7 cut(s) 138, 584, 810, 936, 959, 1011, 1139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.