Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000720.1

Orthogroup ID

OG0003337

Physical Location & Seq

Genomic Coordinates Forward (+)

11256 .. 17541

Gene Structure 6286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000720.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

atgacacctgtccaggtcctcattggattgttggcaccttggcattggcatcataaaggaaagtacgaaggcaaaagcagagatgagcaggtgtttgggcccttttgggccggcttgttctgtaaaaggcttgacattcaaagctccttgttctgtgttaaacaaacaccccaaacggaatcaactctcccgcctctgaactttgaagaaatggctccggcgacgttgatcgtcaccaacactccggccgccgatcttgctctcacctacttctcaccgatcgatctccagaccttcgccattcccggcaccaagctcaacccagctctaatcgccgactcgttcagcatacagaagggttacattgcgctgaatgcgattcaacgacggcatgctagggtttctagcggtgacttattatctgtgagcaggttttctccgcctgatgatttcaacctgactgtgctcactctggaattggagttggtgaaaaaagggactaagagtgaacagattgatgctgttgccttgtggagccaacttaaaaagaggtttatcaaccaggttatggcagctggacaaagagtgtcatttcagtaccatgggactatttacatttttacagtcaatcaagctattgtgaaccaacgttctgatacgactaccaatatctttaagcacaaggaattcaatcttcaaacacttggcattggtggattaggtgatgagtttgcagatatatttcgaagagcttttgcctcccgtatcttccctgcacatgttacaaataaactagggcttaagcatgtgaagggtatgctgctttatggaccacctgtgctatttgtaaggcacaaagtctttcttactcaatatcaagattcattacgcatgagtagatcaatggtgcatcaatttcttgctcatggagacaaaattgaccctactccccccctcctcttcctctccccctcttctcctgtacaaagatttgttgtggagggtcttgcaaaaatgaaaagaaaaaagaagaagaagattctaggccattattgtctcgtgttcctgagctatgtcatcagtgtgactgaaagactacttgcttgtgcagaactggaaggtgttgttaaaagtgcagtatcatttgctttgaatagacaactaagtttgtatgatcttaccaagccatatcttaccaaaccagtagatgaagcgagtattaaggttactagggatgattttctatgtgcactccatgatattgtacctgcagttggagcctccgctgatgaccctgaaagatgcagaagcccacttgttacatgccttctggaaagtcctagtggctgtggtaaatcttcactagcagcaactgttggcatcgacagagatttcccctttgttaagattgttactagagtatattgctattggtccgaggtgctagaacagttaaatatctttgctgatgaagacatagatgcagctgcagaggccctaaatgatagaattaccctaacagcagtaaaaaggctaaaatatacagtggaacactcctcatcttgccctgatgtaccaccgaacgagcctaatctggcaaggcctactagggctggaaatgcgcaagttggggccgttgctggtagtgtaattagcgtcgagggtggaggatggatgccgagagtgaaagatgagaggcaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005911 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04138 ko04721 ko04727 ko04962 map04138 map04721 map04727 map04962

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N

Protein Analysis

567

Amino Acids

62.96

Weight (kDa)

8.97

Isoelectric Point (pI)

42.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04910
fragaria_vesca	FvH4_3g09180 FvH4_4g01371 FvH4_4g01380
malus_domestica	MD05G1312500.v1.1 MD05G1339600.v1.1 MD10G1294300.v1.1
prunus_persica	Prupe.4G047600_v2.0.a1
pyrus_communis	pycom05g29040 pycom10g24600
rosa_chinensis	RchiOBHm_Chr4g0419821 RchiOBHm_Chr5g0005931 RchiOBHm_Chr5g0005941 RchiOBHm_Chr5g0008441
rosa_laevigata	RLG00000031340 RLG00000031347 RLG00000031352 RLG00000031389 RLG00000031572
rosa_multiflora	Rmu_sc0000720.1_g000006 Rmu_sc0004326.1_g000001 Rmu_sc0006414.1_g000006
rosa_roxburghii	Rroxscaffold_1G00068050
rosa_rugosa	Rorug04G0435800
rosa_samantha	Rh4AG222000 Rh4BG224200 Rh4CG235100 Rh4DG221000 Rh5AG064700 Rh5BG061700 Rh5CG071500 Rh5CG071600 Rh5CG071800 Rh5CG071900
rosa_wichuraiana	Rw4G019100 Rw5G005630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	79
Acc16I	TGCGCA	1 cut(s)	1623
Acc36I	ACCTGC	3 cut(s)	79, 420, 1276
AccB1I	GGYRCC	2 cut(s)	34, 308
AccB7I	CCANNNNNTGG	1 cut(s)	568
AciI	CCGC	5 cut(s)	191, 249, 408, 440, 1284
AclI	AACGTT	1 cut(s)	649
AcoI	YGGCCR	1 cut(s)	246
AcsI	RAATTY	1 cut(s)	686
AfaI	GTAC	5 cut(s)	65, 599, 984, 1266, 1575
AfiI	CCNNNNNNNGG	2 cut(s)	568, 1274
AflII	CTTAAG	1 cut(s)	800
AflIII	ACRYGT	1 cut(s)	778
AgsI	TTSAA	7 cut(s)	140, 206, 383, 454, 691, 698, 1153
AjnI	CCWGG	2 cut(s)	12, 561
AluBI	AGCT	8 cut(s)	144, 316, 326, 575, 635, 752, 1071, 1487
AluI	AGCT	8 cut(s)	144, 316, 326, 575, 635, 752, 1071, 1487
Alw21I	GWGCWC	2 cut(s)	468, 1252
Alw26I	GTCTC	2 cut(s)	924, 1061
Alw44I	GTGCAC	1 cut(s)	1248
AlwNI	CAGNNNCTG	1 cut(s)	1373
AoxI	GGCC	7 cut(s)	98, 108, 246, 1045, 1494, 1601, 1632
ApaI	GGGCCC	1 cut(s)	102
ApaLI	GTGCAC	1 cut(s)	1248
ApeKI	GCWGC	5 cut(s)	572, 820, 1367, 1484, 1487
ApoI	RAATTY	1 cut(s)	686
AspLEI	GCGC	2 cut(s)	370, 1624
AspS9I	GGNCC	8 cut(s)	16, 98, 99, 108, 830, 1434, 1495, 1632
AsuC2I	CCSGG	1 cut(s)	306
AsuHPI	GGTGA	6 cut(s)	226, 256, 267, 422, 499, 734
AsuII	TTCGAA	1 cut(s)	745
AvaII	GGWCC	3 cut(s)	16, 830, 1434
BaeGI	GKGCMC	2 cut(s)	102, 1252
BanI	GGYRCC	2 cut(s)	34, 308
BanII	GRGCYC	1 cut(s)	102
BauI	CACGAG	1 cut(s)	1058
BbsI	GAAGAC	1 cut(s)	1479
Bbv12I	GWGCWC	2 cut(s)	468, 1252
BbvI	GCAGC	5 cut(s)	584, 807, 1379, 1474, 1496
BccI	CCATC	1 cut(s)	1665
BceAI	ACGGC	2 cut(s)	404, 1619
BciT130I	CCWGG	2 cut(s)	14, 563
BcnI	CCSGG	1 cut(s)	306
BcoDI	GTCTC	2 cut(s)	924, 1061
BfmI	CTRYAG	2 cut(s)	1269, 1488
BfrI	CTTAAG	1 cut(s)	800
BfuAI	ACCTGC	3 cut(s)	79, 420, 1276
BisI	GCNGC	6 cut(s)	249, 573, 821, 1368, 1485, 1488
BlsI	GCNGC	6 cut(s)	250, 574, 822, 1369, 1486, 1489
Bme1390I	CCNGG	3 cut(s)	14, 306, 563
Bme18I	GGWCC	3 cut(s)	16, 830, 1434
BmgT120I	GGNCC	8 cut(s)	16, 98, 99, 108, 830, 1434, 1495, 1632
BmiI	GGNNCC	7 cut(s)	36, 100, 216, 310, 536, 1279, 1633
BmrFI	CCNGG	3 cut(s)	14, 306, 563
BmsI	GCATC	7 cut(s)	58, 508, 919, 1292, 1389, 1471, 1665
BoxI	GACNNNNGTC	1 cut(s)	8
BpiI	GAAGAC	1 cut(s)	1479
BpmI	CTGGAG	1 cut(s)	272
Bpu10I	CCTNAGC	1 cut(s)	1067
Bpu14I	TTCGAA	1 cut(s)	745
BpuMI	CCSGG	1 cut(s)	306
Bsa29I	ATCGAT	1 cut(s)	282
BsaJI	CCNNGG	3 cut(s)	38, 601, 1437
BsaXI	ACNNNNNCTCC	2 cut(s)	226, 256
Bsc4I	CCNNNNNNNGG	2 cut(s)	568, 1274
Bse118I	RCCGGY	1 cut(s)	110
Bse1I	ACTGG	2 cut(s)	1119, 1202
Bse3DI	GCAATG	1 cut(s)	363
BseBI	CCWGG	2 cut(s)	14, 563
BseCI	ATCGAT	1 cut(s)	282
BseDI	CCNNGG	3 cut(s)	38, 601, 1437
BseGI	GGATG	3 cut(s)	1240, 1676, 1680
BseLI	CCNNNNNNNGG	2 cut(s)	568, 1274
BseMI	GCAATG	1 cut(s)	363
BseMII	CTCAG	1 cut(s)	1058
BseNI	ACTGG	2 cut(s)	1119, 1202
BseRI	GAGGAG	2 cut(s)	947, 1546
BseSI	GKGCMC	2 cut(s)	102, 1252
BseX3I	CGGCCG	1 cut(s)	246
BseXI	GCAGC	5 cut(s)	584, 807, 1379, 1474, 1496
BseYI	CCCAGC	1 cut(s)	322
BsgI	GTGCAG	3 cut(s)	759, 1128, 1155
Bsh1285I	CGRYCG	2 cut(s)	249, 282
BshFI	GGCC	7 cut(s)	100, 110, 248, 1047, 1496, 1603, 1634
BshNI	GGYRCC	2 cut(s)	34, 308
BshVI	ATCGAT	1 cut(s)	282
BsiEI	CGRYCG	2 cut(s)	249, 282
BsiHKAI	GWGCWC	2 cut(s)	468, 1252
BsiSI	CCGG	4 cut(s)	111, 218, 245, 306
BslFI	GGGAC	2 cut(s)	511, 619
BslI	CCNNNNNNNGG	2 cut(s)	568, 1274
BsmAI	GTCTC	2 cut(s)	924, 1061
BsmFI	GGGAC	2 cut(s)	511, 619
BsmI	GAATGC	1 cut(s)	379
BsnI	GGCC	7 cut(s)	100, 110, 248, 1047, 1496, 1603, 1634
Bsp119I	TTCGAA	1 cut(s)	745
Bsp120I	GGGCCC	1 cut(s)	98
Bsp1286I	GDGCHC	3 cut(s)	102, 468, 1252
Bsp1407I	TGTACA	1 cut(s)	982
Bsp143I	GATC	6 cut(s)	228, 253, 279, 283, 899, 1174
Bsp19I	CCATGG	1 cut(s)	601
BspACI	CCGC	5 cut(s)	191, 249, 408, 440, 1284
BspANI	GGCC	7 cut(s)	100, 110, 248, 1047, 1496, 1603, 1634
BspCNI	CTCAG	1 cut(s)	1059
BspDI	ATCGAT	1 cut(s)	282
BspLI	GGNNCC	7 cut(s)	36, 100, 216, 310, 536, 1279, 1633
BspMAI	CTGCAG	2 cut(s)	1273, 1492
BspMI	ACCTGC	3 cut(s)	79, 420, 1276
BspQI	GCTCTTC	1 cut(s)	742
BspT104I	TTCGAA	1 cut(s)	745
BspT107I	GGYRCC	2 cut(s)	34, 308
BspTI	CTTAAG	1 cut(s)	800
BsrDI	GCAATG	1 cut(s)	363
BsrFI	RCCGGY	1 cut(s)	110
BsrGI	TGTACA	1 cut(s)	982
BsrI	ACTGG	2 cut(s)	1119, 1202
BssAI	RCCGGY	1 cut(s)	110
BssECI	CCNNGG	3 cut(s)	38, 601, 1437
BssMI	GATC	6 cut(s)	228, 253, 279, 283, 899, 1174
BssSI	CACGAG	1 cut(s)	1058
BssT1I	CCWWGG	2 cut(s)	38, 601
Bst2BI	CACGAG	1 cut(s)	1058
Bst2UI	CCWGG	2 cut(s)	14, 563
Bst4CI	ACNGT	5 cut(s)	463, 625, 1375, 1452, 1546
Bst6I	CTCTTC	3 cut(s)	742, 965, 979
BstAFI	CTTAAG	1 cut(s)	800
BstAUI	TGTACA	1 cut(s)	982
BstBI	TTCGAA	1 cut(s)	745
BstC8I	GCNNGC	2 cut(s)	112, 393
BstDEI	CTNAG	3 cut(s)	501, 1067, 1163
BstDSI	CCRYGG	1 cut(s)	601
BstF5I	GGATG	3 cut(s)	1240, 1676, 1680
BstHHI	GCGC	2 cut(s)	370, 1624
BstKTI	GATC	6 cut(s)	231, 256, 282, 286, 902, 1177
BstMAI	GTCTC	2 cut(s)	924, 1061
BstMBI	GATC	6 cut(s)	228, 253, 279, 283, 899, 1174
BstMCI	CGRYCG	2 cut(s)	249, 282
BstMWI	GCNNNNNNNGC	6 cut(s)	257, 332, 374, 1277, 1493, 1619
BstNI	CCWGG	2 cut(s)	14, 563
BstNSI	RCATGY	4 cut(s)	395, 782, 809, 1326
BstPAI	GACNNNNGTC	1 cut(s)	8
BstSCI	CCNGG	3 cut(s)	12, 304, 561
BstSFI	CTRYAG	2 cut(s)	1269, 1488
BstSLI	GKGCMC	2 cut(s)	102, 1252
BstV1I	GCAGC	5 cut(s)	584, 807, 1379, 1474, 1496
BstV2I	GAAGAC	1 cut(s)	1479
BstZI	CGGCCG	1 cut(s)	246
Bsu15I	ATCGAT	1 cut(s)	282
BsuRI	GGCC	7 cut(s)	100, 110, 248, 1047, 1496, 1603, 1634
BsuTUI	ATCGAT	1 cut(s)	282
BtgI	CCRYGG	1 cut(s)	601
BtsCI	GGATG	3 cut(s)	1240, 1676, 1680
BtsIMutI	CAGTG	2 cut(s)	1087, 1551
BveI	ACCTGC	3 cut(s)	79, 420, 1276
Cac8I	GCNNGC	2 cut(s)	112, 393
CaiI	CAGNNNCTG	1 cut(s)	1373
CfoI	GCGC	2 cut(s)	370, 1624
Cfr10I	RCCGGY	1 cut(s)	110
Cfr13I	GGNCC	8 cut(s)	16, 98, 99, 108, 830, 1434, 1495, 1632
ClaI	ATCGAT	1 cut(s)	282
CseI	GACGC	1 cut(s)	1645
CsiI	ACCWGGT	1 cut(s)	561
Csp6I	GTAC	5 cut(s)	64, 598, 983, 1265, 1574
CviAII	CATG	8 cut(s)	392, 602, 779, 806, 892, 926, 1256, 1323
CviQI	GTAC	5 cut(s)	64, 598, 983, 1265, 1574
DdeI	CTNAG	3 cut(s)	501, 1067, 1163
DpnI	GATC	6 cut(s)	230, 255, 281, 285, 901, 1176
DpnII	GATC	6 cut(s)	228, 253, 279, 283, 899, 1174
EaeI	YGGCCR	1 cut(s)	246
EagI	CGGCCG	1 cut(s)	246
Eam1104I	CTCTTC	3 cut(s)	742, 965, 979
EarI	CTCTTC	3 cut(s)	742, 965, 979
EciI	GGCGGA	1 cut(s)	429
EclXI	CGGCCG	1 cut(s)	246
Eco130I	CCWWGG	2 cut(s)	38, 601
Eco147I	AGGCCT	1 cut(s)	1603
Eco24I	GRGCYC	1 cut(s)	102
Eco47I	GGWCC	3 cut(s)	16, 830, 1434
Eco52I	CGGCCG	1 cut(s)	246
EcoO109I	RGGNCCY	3 cut(s)	16, 99, 1495
EcoRI	GAATTC	1 cut(s)	686
EcoRII	CCWGG	2 cut(s)	12, 561
EcoT14I	CCWWGG	2 cut(s)	38, 601
EcoT38I	GRGCYC	1 cut(s)	102
ErhI	CCWWGG	2 cut(s)	38, 601
FaeI	CATG	8 cut(s)	395, 605, 782, 809, 895, 929, 1259, 1326
FalI	AAGNNNNNCTT	2 cut(s)	849, 881
FaqI	GGGAC	2 cut(s)	511, 619
FatI	CATG	8 cut(s)	391, 601, 778, 805, 891, 925, 1255, 1322
FauI	CCCGC	1 cut(s)	198
Fnu4HI	GCNGC	6 cut(s)	249, 573, 821, 1368, 1485, 1488
FokI	GGATG	3 cut(s)	1247, 1683, 1687
FriOI	GRGCYC	1 cut(s)	102
Fsp4HI	GCNGC	6 cut(s)	249, 573, 821, 1368, 1485, 1488
FspI	TGCGCA	1 cut(s)	1623
GlaI	GCGC	2 cut(s)	369, 1623
GluI	GCNGC	6 cut(s)	249, 573, 821, 1368, 1485, 1488
GsaI	CCCAGC	1 cut(s)	326
GsuI	CTGGAG	1 cut(s)	272
HaeIII	GGCC	7 cut(s)	100, 110, 248, 1047, 1496, 1603, 1634
HapII	CCGG	4 cut(s)	111, 218, 245, 306
HgaI	GACGC	1 cut(s)	1645
HhaI	GCGC	2 cut(s)	370, 1624
Hin1II	CATG	8 cut(s)	395, 605, 782, 809, 895, 929, 1259, 1326
Hin6I	GCGC	2 cut(s)	368, 1622
HinP1I	GCGC	2 cut(s)	368, 1622
HinfI	GANTC	5 cut(s)	179, 338, 379, 881, 1039
HpaII	CCGG	4 cut(s)	111, 218, 245, 306
HphI	GGTGA	6 cut(s)	226, 256, 267, 422, 499, 734
Hpy166II	GTNNAC	3 cut(s)	509, 643, 1250
Hpy188I	TCNGA	3 cut(s)	198, 655, 1438
Hpy188III	TCNNGA	5 cut(s)	289, 473, 878, 1066, 1331
Hpy8I	GTNNAC	3 cut(s)	509, 643, 1250
Hpy99I	CGWCG	3 cut(s)	226, 390, 1661
HpyAV	CCTTC	6 cut(s)	62, 304, 349, 805, 1112, 1337
HpyCH4III	ACNGT	5 cut(s)	463, 625, 1375, 1452, 1546
HpyCH4IV	ACGT	2 cut(s)	224, 649
HpyF10VI	GCNNNNNNNGC	6 cut(s)	257, 332, 374, 1277, 1493, 1619
HpyF3I	CTNAG	3 cut(s)	501, 1067, 1163
HpySE526I	ACGT	2 cut(s)	224, 649
Hsp92II	CATG	8 cut(s)	395, 605, 782, 809, 895, 929, 1259, 1326
HspAI	GCGC	2 cut(s)	368, 1622
KroI	GCCGGC	1 cut(s)	110
KroNI	GCCGGC	1 cut(s)	112
Kzo9I	GATC	6 cut(s)	228, 253, 279, 283, 899, 1174
LguI	GCTCTTC	1 cut(s)	742
LmnI	GCTCC	4 cut(s)	149, 220, 534, 1277
Lsp1109I	GCAGC	5 cut(s)	584, 807, 1379, 1474, 1496
LweI	GCATC	7 cut(s)	58, 508, 919, 1292, 1389, 1471, 1665
MabI	ACCWGGT	1 cut(s)	561
MaeII	ACGT	2 cut(s)	224, 649
MaeIII	GTNAC	8 cut(s)	232, 359, 410, 781, 1084, 1225, 1318, 1411
MalI	GATC	6 cut(s)	230, 255, 281, 285, 901, 1176
MboI	GATC	6 cut(s)	228, 253, 279, 283, 899, 1174
MhlI	GDGCHC	3 cut(s)	102, 468, 1252
MluCI	AATT	6 cut(s)	476, 686, 914, 936, 1509, 1650
MlyI	GAGTC	1 cut(s)	332
MmeI	TCCRAC	1 cut(s)	1255
MroNI	GCCGGC	1 cut(s)	110
MseI	TTAA	8 cut(s)	159, 543, 675, 801, 1128, 1221, 1404, 1454
MslI	CAYNNNNRTG	1 cut(s)	1082
MspA1I	CMGCKG	3 cut(s)	575, 1286, 1487
MspCI	CTTAAG	1 cut(s)	800
MspI	CCGG	4 cut(s)	111, 218, 245, 306
MspR9I	CCNGG	3 cut(s)	14, 306, 563
Mva1269I	GAATGC	1 cut(s)	379
MvaI	CCWGG	2 cut(s)	14, 563
MwoI	GCNNNNNNNGC	6 cut(s)	257, 332, 374, 1277, 1493, 1619
NaeI	GCCGGC	1 cut(s)	112
NciI	CCSGG	1 cut(s)	306
NcoI	CCATGG	1 cut(s)	601
NdeII	GATC	6 cut(s)	228, 253, 279, 283, 899, 1174
NgoMIV	GCCGGC	1 cut(s)	110
NlaIII	CATG	8 cut(s)	395, 605, 782, 809, 895, 929, 1259, 1326
NlaIV	GGNNCC	7 cut(s)	36, 100, 216, 310, 536, 1279, 1633
NmeAIII	GCCGAG	1 cut(s)	1704
NmuCI	GTSAC	3 cut(s)	232, 410, 1084
NsbI	TGCGCA	1 cut(s)	1623
NspI	RCATGY	4 cut(s)	395, 782, 809, 1326
NspV	TTCGAA	1 cut(s)	745
PaeI	GCATGC	1 cut(s)	395
PaqCI	CACCTGC	1 cut(s)	79
PceI	AGGCCT	1 cut(s)	1603
PciI	ACATGT	1 cut(s)	778
PciSI	GCTCTTC	1 cut(s)	742
PctI	GAATGC	1 cut(s)	379
PdiI	GCCGGC	1 cut(s)	112
PfeI	GAWTC	4 cut(s)	179, 379, 881, 1039
PflMI	CCANNNNNTGG	1 cut(s)	568
PkrI	GCNGC	6 cut(s)	250, 574, 822, 1369, 1486, 1489
Ple19I	CGATCG	1 cut(s)	282
PleI	GAGTC	1 cut(s)	332
PpsI	GAGTC	1 cut(s)	332
PpuMI	RGGWCCY	1 cut(s)	16
PscI	ACATGT	1 cut(s)	778
PshAI	GACNNNNGTC	1 cut(s)	8
Psp1406I	AACGTT	1 cut(s)	649
Psp5II	RGGWCCY	1 cut(s)	16
Psp6I	CCWGG	2 cut(s)	12, 561
PspFI	CCCAGC	1 cut(s)	322
PspGI	CCWGG	2 cut(s)	12, 561
PspN4I	GGNNCC	7 cut(s)	36, 100, 216, 310, 536, 1279, 1633
PspOMI	GGGCCC	1 cut(s)	98
PspPI	GGNCC	8 cut(s)	16, 98, 99, 108, 830, 1434, 1495, 1632
PspPPI	RGGWCCY	1 cut(s)	16
PstI	CTGCAG	2 cut(s)	1273, 1492
PstNI	CAGNNNCTG	1 cut(s)	1373
PvuI	CGATCG	1 cut(s)	282
PvuII	CAGCTG	2 cut(s)	575, 1487
RsaI	GTAC	5 cut(s)	65, 599, 984, 1266, 1575
RsaNI	GTAC	5 cut(s)	64, 598, 983, 1265, 1574
RseI	CAYNNNNRTG	1 cut(s)	1082
SapI	GCTCTTC	1 cut(s)	742
SaqAI	TTAA	8 cut(s)	159, 543, 675, 801, 1128, 1221, 1404, 1454
SatI	GCNGC	6 cut(s)	249, 573, 821, 1368, 1485, 1488
Sau3AI	GATC	6 cut(s)	228, 253, 279, 283, 899, 1174
Sau96I	GGNCC	8 cut(s)	16, 98, 99, 108, 830, 1434, 1495, 1632
SchI	GAGTC	1 cut(s)	332
ScrFI	CCNGG	3 cut(s)	14, 306, 563
SduI	GDGCHC	3 cut(s)	102, 468, 1252
SexAI	ACCWGGT	1 cut(s)	561
SfaNI	GCATC	7 cut(s)	58, 508, 919, 1292, 1389, 1471, 1665
SfcI	CTRYAG	2 cut(s)	1269, 1488
SfuI	TTCGAA	1 cut(s)	745
SinI	GGWCC	3 cut(s)	16, 830, 1434
SmiMI	CAYNNNNRTG	1 cut(s)	1082
SmlI	CTYRAG	1 cut(s)	800
SmoI	CTYRAG	1 cut(s)	800
SphI	GCATGC	1 cut(s)	395
Sse9I	AATT	6 cut(s)	476, 686, 914, 936, 1509, 1650
SseBI	AGGCCT	1 cut(s)	1603
SsiI	CCGC	5 cut(s)	191, 249, 408, 440, 1284
StuI	AGGCCT	1 cut(s)	1603
StyD4I	CCNGG	3 cut(s)	12, 304, 561
StyI	CCWWGG	2 cut(s)	38, 601
TaaI	ACNGT	5 cut(s)	463, 625, 1375, 1452, 1546
TaiI	ACGT	2 cut(s)	227, 652
TaqI	TCGA	4 cut(s)	282, 745, 1383, 1659
TasI	AATT	6 cut(s)	476, 686, 914, 936, 1509, 1650
TatI	WGTACW	1 cut(s)	982
TauI	GCSGC	1 cut(s)	251
TfiI	GAWTC	4 cut(s)	179, 379, 881, 1039
Tru1I	TTAA	8 cut(s)	159, 543, 675, 801, 1128, 1221, 1404, 1454
Tru9I	TTAA	8 cut(s)	159, 543, 675, 801, 1128, 1221, 1404, 1454
TscAI	CASTG	2 cut(s)	1087, 1551
TseFI	GTSAC	3 cut(s)	232, 410, 1084
TseI	GCWGC	5 cut(s)	572, 820, 1367, 1484, 1487
Tsp45I	GTSAC	3 cut(s)	232, 410, 1084
TspDTI	ATGAA	4 cut(s)	873, 1031, 1224, 1485
TspGWI	ACGGA	1 cut(s)	191
TspRI	CASTG	2 cut(s)	1087, 1551
Van91I	CCANNNNNTGG	1 cut(s)	568
Vha464I	CTTAAG	1 cut(s)	800
VneI	GTGCAC	1 cut(s)	1248
VpaK11BI	GGWCC	3 cut(s)	16, 830, 1434
XapI	RAATTY	1 cut(s)	686
XceI	RCATGY	4 cut(s)	395, 782, 809, 1326
XcmI	CCANNNNNNNNNTGG	1 cut(s)	20

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.