Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004326.1

Orthogroup ID

OG0003337

Physical Location & Seq

Genomic Coordinates Reverse (-)

797 .. 6937

Gene Structure 6141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004326.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ctgaaagaaactcctcaccagagcatacagaagggttacattgcgctgaatgcgattcaacgacggcatgctagggtttctagcggtgactcattatctgtgagcaggtttactccgcctgatgatttcaacctgaccgtgctcactctggaattggagtttgtgaaaaaagggactaagagtgaacagattgatgctgttgccttgtcgagccaacttaaaaagaggtttatcaaccaggttatgacagccggacaaagagtatcatttgagtaccttgggactaattacatttttacagtcaatcaagctgtaagatccgaagagtctagctctgttgaaagagggatgatctcaagtgaaacatacttcatttttgaggcaccgagtggaaatggaataaagattgtgaaccaacgttctgctacgactagcaatatctttaagcacaaggaattcaaccttcaatcacttggcattggtggcctaggtgctgagtttgcagatatatttcgaagagcttttgcctcccgtgtcttccctgcacatgttacaaataaactagggattaagcatgtgaagggtatgctgctttatggaccacctggtactggaaaaactcttatggctcgtcaaattggaaaaatgttgaatgggaaagatccaaagattgttaatggtccagaagtcctgagcaagttcgttggtgaaactgaaaaaaatgttagggatctatttgctgatgctgagaatgatcaaaggcttcgtggagatgaaagtgaattgcatgtcataatctttgatgaaatcgatgctatttgtaagtcaagaggatcaactagagatggcacaggagttcatgatagtattgtgaaccagttacttacaaagattgatggtgtggaatctctgaataatgttttgcttattgggatgaccaacagaaaggatttgattgatgaagcccttttgaggccaggacgtctggaagttcaaattgagataagtcttcctgatgaaaatggtcgcatacagattcttcaaattcatacgaacaaaatgaaggaaagctcttttcttgctcctgatgtcaacctgcaagagcttgctgctcgtacaaagaattatagtggtgcagaactggaaggtgttgttaaaagcgcagtatcatttgctttgaatagacaactaagtttggatgatcttaccaagccagtggatgaggagagtattaaggttaccatggatgattttctacgtgcactccatgaaattgtacctgcatttggtgcctccactgatgaccttgaaagatgcagacttcatggcatggtggattgtggggatcgacataagcatatctatcaaagagccatgctacttgtggaacaagttaaatcaagtgagagaagtcctcttgttacatgccttttggaaggtcctagtggcagtggtaaatcttcactagcagctactgttggcatcgacagtgatttcccctatgttaagattatctcggctgaggccatgattggtcttcaagagagcaccaaatgtgcgcaaatcgcaaaggtttttgaagatgcatacaagtcaccattaagcattatcatcctggacaatattgaaaggttactggagtatattgctattggtccgaggttttcaaatttgatatctcaaacactgatgctccttctcaagcgcactcctccaaaggggaaaaagcttctggtttttggtacaacaagtgaattgggcttcttagactcgattggtttttgtgataccttctccgtcacttacaatgttcccacattacagacaccggctgcaaagaaggtgctagaacagttaaatgtctttgctgatgaagacatagatgcagctgcagaggccctgaatgatattcctatcaagaagctctatatggtaattgagatggcagcccagggtgagcaaggagggtctgcccaggcaatcttctctggacgagcgaaaataaagatcaatcacttttatgagatccttcaggatactgttggatattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005911 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04138 ko04721 ko04727 ko04962 map04138 map04721 map04727 map04962

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N

Protein Analysis

683

Amino Acids

75.29

Weight (kDa)

6.09

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04910
fragaria_vesca	FvH4_3g09180 FvH4_4g01371 FvH4_4g01380
malus_domestica	MD05G1312500.v1.1 MD05G1339600.v1.1 MD10G1294300.v1.1
prunus_persica	Prupe.4G047600_v2.0.a1
pyrus_communis	pycom05g29040 pycom10g24600
rosa_chinensis	RchiOBHm_Chr4g0419821 RchiOBHm_Chr5g0005931 RchiOBHm_Chr5g0005941 RchiOBHm_Chr5g0008441
rosa_laevigata	RLG00000031340 RLG00000031347 RLG00000031352 RLG00000031389 RLG00000031572
rosa_multiflora	Rmu_sc0000720.1_g000006 Rmu_sc0004326.1_g000001 Rmu_sc0006414.1_g000006
rosa_roxburghii	Rroxscaffold_1G00068050
rosa_rugosa	Rorug04G0435800
rosa_samantha	Rh4AG222000 Rh4BG224200 Rh4CG235100 Rh4DG221000 Rh5AG064700 Rh5BG061700 Rh5CG071500 Rh5CG071600 Rh5CG071800 Rh5CG071900
rosa_wichuraiana	Rw4G019100 Rw5G005630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	985
Acc16I	TGCGCA	1 cut(s)	1560
Acc36I	ACCTGC	3 cut(s)	96, 1104, 1288
AccB1I	GGYRCC	2 cut(s)	382, 1289
AciI	CCGC	2 cut(s)	84, 116
AclI	AACGTT	1 cut(s)	418
AclWI	GGATC	6 cut(s)	312, 656, 738, 841, 1353, 2020
AcsI	RAATTY	3 cut(s)	455, 1044, 1669
AcuI	CTGAAG	1 cut(s)	2015
AcyI	GRCGYC	1 cut(s)	982
AdeI	CACNNNGTG	1 cut(s)	389
AfaI	GTAC	5 cut(s)	275, 610, 1117, 1278, 1744
AfiI	CCNNNNNNNGG	4 cut(s)	611, 972, 1286, 1718
AflIII	ACRYGT	1 cut(s)	547
AjnI	CCWGG	6 cut(s)	237, 604, 976, 1614, 1950, 1974
AluBI	AGCT	9 cut(s)	311, 333, 521, 1071, 1105, 1472, 1729, 1889, 1924
AluI	AGCT	9 cut(s)	311, 333, 521, 1071, 1105, 1472, 1729, 1889, 1924
Alw21I	GWGCWC	3 cut(s)	144, 1264, 1550
Alw44I	GTGCAC	1 cut(s)	1260
AlwI	GGATC	6 cut(s)	312, 656, 738, 841, 1353, 2020
AlwNI	CAGNNNCTG	1 cut(s)	1475
AoxI	GGCC	4 cut(s)	484, 974, 1524, 1896
ApaLI	GTGCAC	1 cut(s)	1260
ApeKI	GCWGC	7 cut(s)	589, 1109, 1469, 1832, 1886, 1889, 1946
ApoI	RAATTY	3 cut(s)	455, 1044, 1669
AspA2I	CCTAGG	1 cut(s)	487
AspLEI	GCGC	4 cut(s)	46, 1163, 1561, 1707
AspS9I	GGNCC	5 cut(s)	599, 680, 1439, 1655, 1897
AsuHPI	GGTGA	5 cut(s)	8, 98, 719, 1587, 1967
AsuII	TTCGAA	1 cut(s)	514
AvaII	GGWCC	4 cut(s)	599, 680, 1439, 1655
AvrII	CCTAGG	1 cut(s)	487
BaeGI	GKGCMC	1 cut(s)	1264
BanI	GGYRCC	2 cut(s)	382, 1289
BbsI	GAAGAC	4 cut(s)	529, 1001, 1529, 1881
Bbv12I	GWGCWC	3 cut(s)	144, 1264, 1550
BbvCI	CCTCAGC	1 cut(s)	1521
BbvI	GCAGC	7 cut(s)	576, 1096, 1481, 1819, 1876, 1898, 1958
BccI	CCATC	3 cut(s)	839, 890, 1936
BceAI	ACGGC	1 cut(s)	80
BciT130I	CCWGG	6 cut(s)	239, 606, 978, 1616, 1952, 1976
BciVI	GTATCC	1 cut(s)	2029
BclI	TGATCA	1 cut(s)	754
BfmI	CTRYAG	1 cut(s)	1890
BfuAI	ACCTGC	3 cut(s)	96, 1104, 1288
BfuI	GTATCC	1 cut(s)	2029
BisI	GCNGC	7 cut(s)	590, 1110, 1470, 1833, 1887, 1890, 1947
BlnI	CCTAGG	1 cut(s)	487
BlsI	GCNGC	7 cut(s)	591, 1111, 1471, 1834, 1888, 1891, 1948
Bme1390I	CCNGG	6 cut(s)	239, 606, 978, 1616, 1952, 1976
Bme18I	GGWCC	4 cut(s)	599, 680, 1439, 1655
BmgT120I	GGNCC	5 cut(s)	599, 680, 1439, 1655, 1897
BmiI	GGNNCC	2 cut(s)	384, 1291
BmrFI	CCNGG	6 cut(s)	239, 606, 978, 1616, 1952, 1976
BmsI	GCATC	8 cut(s)	184, 733, 802, 1304, 1491, 1573, 1680, 1873
BpiI	GAAGAC	4 cut(s)	529, 1001, 1529, 1881
BplI	GAGNNNNNCTC	4 cut(s)	317, 349, 1399, 1431
BpmI	CTGGAG	1 cut(s)	1658
Bpu10I	CCTNAGC	2 cut(s)	692, 1521
Bpu14I	TTCGAA	1 cut(s)	514
BpuEI	CTTGAG	2 cut(s)	340, 1685
Bsa29I	ATCGAT	1 cut(s)	810
BsaAI	YACGTR	1 cut(s)	1259
BsaHI	GRCGYC	1 cut(s)	982
BsaJI	CCNNGG	7 cut(s)	277, 487, 1242, 1658, 1950, 1951, 1974
BsaXI	ACNNNNNCTCC	4 cut(s)	1248, 1278, 1677, 1707
Bsc4I	CCNNNNNNNGG	4 cut(s)	611, 972, 1286, 1718
Bse118I	RCCGGY	1 cut(s)	1828
Bse1I	ACTGG	5 cut(s)	616, 877, 1146, 1214, 1641
Bse3DI	GCAATG	1 cut(s)	39
BseBI	CCWGG	6 cut(s)	239, 606, 978, 1616, 1952, 1976
BseCI	ATCGAT	1 cut(s)	810
BseDI	CCNNGG	7 cut(s)	277, 487, 1242, 1658, 1950, 1951, 1974
BseGI	GGATG	6 cut(s)	354, 939, 1204, 1225, 1252, 1611
BseLI	CCNNNNNNNGG	4 cut(s)	611, 972, 1286, 1718
BseMI	GCAATG	1 cut(s)	39
BseMII	CTCAG	4 cut(s)	486, 683, 738, 1512
BseNI	ACTGG	5 cut(s)	616, 877, 1146, 1214, 1641
BseRI	GAGGAG	2 cut(s)	1238, 1701
BseSI	GKGCMC	1 cut(s)	1264
BseXI	GCAGC	7 cut(s)	576, 1096, 1481, 1819, 1876, 1898, 1958
BsgI	GTGCAG	2 cut(s)	528, 1155
BshFI	GGCC	4 cut(s)	486, 976, 1526, 1898
BshNI	GGYRCC	2 cut(s)	382, 1289
BshVI	ATCGAT	1 cut(s)	810
BsiHKAI	GWGCWC	3 cut(s)	144, 1264, 1550
BsiSI	CCGG	2 cut(s)	252, 1829
BslFI	GGGAC	2 cut(s)	187, 295
BslI	CCNNNNNNNGG	4 cut(s)	611, 972, 1286, 1718
BsmFI	GGGAC	2 cut(s)	187, 295
BsmI	GAATGC	1 cut(s)	55
BsnI	GGCC	4 cut(s)	486, 976, 1526, 1898
Bsp119I	TTCGAA	1 cut(s)	514
Bsp1286I	GDGCHC	3 cut(s)	144, 1264, 1550
Bsp19I	CCATGG	1 cut(s)	1242
BspACI	CCGC	2 cut(s)	84, 116
BspANI	GGCC	4 cut(s)	486, 976, 1526, 1898
BspCNI	CTCAG	4 cut(s)	487, 684, 739, 1513
BspDI	ATCGAT	1 cut(s)	810
BspHI	TCATGA	1 cut(s)	859
BspLI	GGNNCC	2 cut(s)	384, 1291
BspMAI	CTGCAG	1 cut(s)	1894
BspMI	ACCTGC	3 cut(s)	96, 1104, 1288
BspPI	GGATC	6 cut(s)	312, 656, 738, 841, 1353, 2020
BspQI	GCTCTTC	1 cut(s)	511
BspT104I	TTCGAA	1 cut(s)	514
BspT107I	GGYRCC	2 cut(s)	382, 1289
BsrDI	GCAATG	1 cut(s)	39
BsrFI	RCCGGY	1 cut(s)	1828
BsrI	ACTGG	5 cut(s)	616, 877, 1146, 1214, 1641
BssAI	RCCGGY	1 cut(s)	1828
BssECI	CCNNGG	7 cut(s)	277, 487, 1242, 1658, 1950, 1951, 1974
BssNI	GRCGYC	1 cut(s)	982
BssT1I	CCWWGG	3 cut(s)	277, 487, 1242
Bst2UI	CCWGG	6 cut(s)	239, 606, 978, 1616, 1952, 1976
Bst4CI	ACNGT	6 cut(s)	139, 301, 1477, 1490, 1854, 2041
Bst6I	CTCTTC	2 cut(s)	318, 511
BstACI	GRCGYC	1 cut(s)	982
BstAPI	GCANNNNNTGC	1 cut(s)	1289
BstBAI	YACGTR	1 cut(s)	1259
BstBI	TTCGAA	1 cut(s)	514
BstC8I	GCNNGC	2 cut(s)	69, 1107
BstDEI	CTNAG	7 cut(s)	177, 495, 692, 747, 1190, 1521, 1765
BstDSI	CCRYGG	1 cut(s)	1242
BstEII	GGTNACC	1 cut(s)	1237
BstF5I	GGATG	6 cut(s)	354, 939, 1204, 1225, 1252, 1611
BstHHI	GCGC	4 cut(s)	46, 1163, 1561, 1707
BstMWI	GCNNNNNNNGC	6 cut(s)	50, 483, 500, 1289, 1565, 1895
BstNI	CCWGG	6 cut(s)	239, 606, 978, 1616, 1952, 1976
BstNSI	RCATGY	5 cut(s)	71, 551, 578, 791, 1428
BstPI	GGTNACC	1 cut(s)	1237
BstSCI	CCNGG	6 cut(s)	237, 604, 976, 1614, 1950, 1974
BstSFI	CTRYAG	1 cut(s)	1890
BstSLI	GKGCMC	1 cut(s)	1264
BstV1I	GCAGC	7 cut(s)	576, 1096, 1481, 1819, 1876, 1898, 1958
BstV2I	GAAGAC	4 cut(s)	529, 1001, 1529, 1881
BstX2I	RGATCY	4 cut(s)	317, 661, 730, 2025
BstXI	CCANNNNNNTGG	1 cut(s)	1216
BstYI	RGATCY	4 cut(s)	317, 661, 730, 2025
Bsu15I	ATCGAT	1 cut(s)	810
BsuI	GTATCC	1 cut(s)	2029
BsuRI	GGCC	4 cut(s)	486, 976, 1526, 1898
BsuTUI	ATCGAT	1 cut(s)	810
BtgI	CCRYGG	1 cut(s)	1242
BtsCI	GGATG	6 cut(s)	354, 939, 1204, 1225, 1252, 1611
BtsI	GCAGTG	1 cut(s)	1456
BtsIMutI	CAGTG	5 cut(s)	1221, 1296, 1456, 1495, 1685
BveI	ACCTGC	3 cut(s)	96, 1104, 1288
Cac8I	GCNNGC	2 cut(s)	69, 1107
CaiI	CAGNNNCTG	1 cut(s)	1475
CciI	TCATGA	1 cut(s)	859
CfoI	GCGC	4 cut(s)	46, 1163, 1561, 1707
Cfr10I	RCCGGY	1 cut(s)	1828
Cfr13I	GGNCC	5 cut(s)	599, 680, 1439, 1655, 1897
ClaI	ATCGAT	1 cut(s)	810
CsiI	ACCWGGT	2 cut(s)	237, 604
Csp6I	GTAC	5 cut(s)	274, 609, 1116, 1277, 1743
CviQI	GTAC	5 cut(s)	274, 609, 1116, 1277, 1743
DdeI	CTNAG	7 cut(s)	177, 495, 692, 747, 1190, 1521, 1765
DraIII	CACNNNGTG	1 cut(s)	389
Eam1104I	CTCTTC	2 cut(s)	318, 511
EarI	CTCTTC	2 cut(s)	318, 511
EciI	GGCGGA	1 cut(s)	105
Eco130I	CCWWGG	3 cut(s)	277, 487, 1242
Eco32I	GATATC	1 cut(s)	1677
Eco47I	GGWCC	4 cut(s)	599, 680, 1439, 1655
Eco57I	CTGAAG	1 cut(s)	2015
Eco91I	GGTNACC	1 cut(s)	1237
EcoO109I	RGGNCCY	2 cut(s)	1439, 1897
EcoO65I	GGTNACC	1 cut(s)	1237
EcoRI	GAATTC	1 cut(s)	455
EcoRII	CCWGG	6 cut(s)	237, 604, 976, 1614, 1950, 1974
EcoRV	GATATC	1 cut(s)	1677
EcoT14I	CCWWGG	3 cut(s)	277, 487, 1242
EcoT22I	ATGCAT	1 cut(s)	1588
ErhI	CCWWGG	3 cut(s)	277, 487, 1242
FaqI	GGGAC	2 cut(s)	187, 295
FbaI	TGATCA	1 cut(s)	754
Fnu4HI	GCNGC	7 cut(s)	590, 1110, 1470, 1833, 1887, 1890, 1947
FokI	GGATG	6 cut(s)	361, 946, 1211, 1232, 1259, 1598
Fsp4HI	GCNGC	7 cut(s)	590, 1110, 1470, 1833, 1887, 1890, 1947
FspI	TGCGCA	1 cut(s)	1560
GlaI	GCGC	4 cut(s)	45, 1162, 1560, 1706
GluI	GCNGC	7 cut(s)	590, 1110, 1470, 1833, 1887, 1890, 1947
GsuI	CTGGAG	1 cut(s)	1658
HaeIII	GGCC	4 cut(s)	486, 976, 1526, 1898
HapII	CCGG	2 cut(s)	252, 1829
HhaI	GCGC	4 cut(s)	46, 1163, 1561, 1707
Hin1I	GRCGYC	1 cut(s)	982
Hin6I	GCGC	4 cut(s)	44, 1161, 1559, 1705
HinP1I	GCGC	4 cut(s)	44, 1161, 1559, 1705
HincII	GTYRAC	1 cut(s)	1093
HindII	GTYRAC	1 cut(s)	1093
HindIII	AAGCTT	1 cut(s)	1727
HinfI	GANTC	6 cut(s)	55, 89, 326, 905, 1036, 1769
HpaII	CCGG	2 cut(s)	252, 1829
HphI	GGTGA	5 cut(s)	8, 98, 719, 1587, 1967
Hpy166II	GTNNAC	6 cut(s)	111, 185, 412, 874, 1093, 1262
Hpy188I	TCNGA	3 cut(s)	322, 912, 1659
Hpy8I	GTNNAC	6 cut(s)	111, 185, 412, 874, 1093, 1262
Hpy99I	CGWCG	1 cut(s)	66
HpyCH4III	ACNGT	6 cut(s)	139, 301, 1477, 1490, 1854, 2041
HpyCH4IV	ACGT	3 cut(s)	418, 982, 1258
HpyF10VI	GCNNNNNNNGC	6 cut(s)	50, 483, 500, 1289, 1565, 1895
HpyF3I	CTNAG	7 cut(s)	177, 495, 692, 747, 1190, 1521, 1765
HpySE526I	ACGT	3 cut(s)	418, 982, 1258
Hsp92I	GRCGYC	1 cut(s)	982
HspAI	GCGC	4 cut(s)	44, 1161, 1559, 1705
Ksp22I	TGATCA	1 cut(s)	754
LguI	GCTCTTC	1 cut(s)	511
LmnI	GCTCC	2 cut(s)	1087, 1698
Lsp1109I	GCAGC	7 cut(s)	576, 1096, 1481, 1819, 1876, 1898, 1958
LweI	GCATC	8 cut(s)	184, 733, 802, 1304, 1491, 1573, 1680, 1873
MabI	ACCWGGT	2 cut(s)	237, 604
MaeII	ACGT	3 cut(s)	418, 982, 1258
MaeIII	GTNAC	9 cut(s)	35, 86, 550, 879, 1237, 1420, 1593, 1632, 1798
MflI	RGATCY	4 cut(s)	317, 661, 730, 2025
MhlI	GDGCHC	3 cut(s)	144, 1264, 1550
MlyI	GAGTC	3 cut(s)	83, 335, 1763
MmeI	TCCRAC	1 cut(s)	2023
Mph1103I	ATGCAT	1 cut(s)	1588
MslI	CAYNNNNRTG	1 cut(s)	2019
MspA1I	CMGCKG	1 cut(s)	1889
MspI	CCGG	2 cut(s)	252, 1829
MspR9I	CCNGG	6 cut(s)	239, 606, 978, 1616, 1952, 1976
Mva1269I	GAATGC	1 cut(s)	55
MvaI	CCWGG	6 cut(s)	239, 606, 978, 1616, 1952, 1976
MwoI	GCNNNNNNNGC	6 cut(s)	50, 483, 500, 1289, 1565, 1895
NcoI	CCATGG	1 cut(s)	1242
NlaIV	GGNNCC	2 cut(s)	384, 1291
NmeAIII	GCCGAG	1 cut(s)	1496
NmuCI	GTSAC	3 cut(s)	86, 1593, 1798
NsbI	TGCGCA	1 cut(s)	1560
NsiI	ATGCAT	1 cut(s)	1588
NspI	RCATGY	5 cut(s)	71, 551, 578, 791, 1428
NspV	TTCGAA	1 cut(s)	514
PaeI	GCATGC	1 cut(s)	71
PagI	TCATGA	1 cut(s)	859
PasI	CCCWGGG	1 cut(s)	1951
PciI	ACATGT	1 cut(s)	547
PciSI	GCTCTTC	1 cut(s)	511
PctI	GAATGC	1 cut(s)	55
PfeI	GAWTC	3 cut(s)	55, 905, 1036
PfoI	TCCNGGA	1 cut(s)	1614
PkrI	GCNGC	7 cut(s)	591, 1111, 1471, 1834, 1888, 1891, 1948
PleI	GAGTC	3 cut(s)	83, 334, 1763
PpsI	GAGTC	3 cut(s)	83, 334, 1763
Ppu21I	YACGTR	1 cut(s)	1259
PpuMI	RGGWCCY	1 cut(s)	1439
PscI	ACATGT	1 cut(s)	547
Psp1406I	AACGTT	1 cut(s)	418
Psp5II	RGGWCCY	1 cut(s)	1439
Psp6I	CCWGG	6 cut(s)	237, 604, 976, 1614, 1950, 1974
PspEI	GGTNACC	1 cut(s)	1237
PspGI	CCWGG	6 cut(s)	237, 604, 976, 1614, 1950, 1974
PspN4I	GGNNCC	2 cut(s)	384, 1291
PspPI	GGNCC	5 cut(s)	599, 680, 1439, 1655, 1897
PspPPI	RGGWCCY	1 cut(s)	1439
PstI	CTGCAG	1 cut(s)	1894
PstNI	CAGNNNCTG	1 cut(s)	1475
PsuI	RGATCY	4 cut(s)	317, 661, 730, 2025
PvuII	CAGCTG	1 cut(s)	1889
RsaI	GTAC	5 cut(s)	275, 610, 1117, 1278, 1744
RsaNI	GTAC	5 cut(s)	274, 609, 1116, 1277, 1743
RseI	CAYNNNNRTG	1 cut(s)	2019
SapI	GCTCTTC	1 cut(s)	511
SatI	GCNGC	7 cut(s)	590, 1110, 1470, 1833, 1887, 1890, 1947
Sau96I	GGNCC	5 cut(s)	599, 680, 1439, 1655, 1897
SchI	GAGTC	3 cut(s)	83, 335, 1763
ScrFI	CCNGG	6 cut(s)	239, 606, 978, 1616, 1952, 1976
SduI	GDGCHC	3 cut(s)	144, 1264, 1550
SexAI	ACCWGGT	2 cut(s)	237, 604
SfaNI	GCATC	8 cut(s)	184, 733, 802, 1304, 1491, 1573, 1680, 1873
SfcI	CTRYAG	1 cut(s)	1890
SfuI	TTCGAA	1 cut(s)	514
SinI	GGWCC	4 cut(s)	599, 680, 1439, 1655
SmiMI	CAYNNNNRTG	1 cut(s)	2019
SmlI	CTYRAG	2 cut(s)	355, 1700
SmoI	CTYRAG	2 cut(s)	355, 1700
SphI	GCATGC	1 cut(s)	71
SsiI	CCGC	2 cut(s)	84, 116
SspI	AATATT	1 cut(s)	1624
StyD4I	CCNGG	6 cut(s)	237, 604, 976, 1614, 1950, 1974
StyI	CCWWGG	3 cut(s)	277, 487, 1242
TaaI	ACNGT	6 cut(s)	139, 301, 1477, 1490, 1854, 2041
TaiI	ACGT	3 cut(s)	421, 985, 1261
TaqI	TCGA	6 cut(s)	209, 514, 810, 1348, 1485, 1772
TfiI	GAWTC	3 cut(s)	55, 905, 1036
TscAI	CASTG	5 cut(s)	1221, 1303, 1456, 1495, 1692
TseFI	GTSAC	3 cut(s)	86, 1593, 1798
TseI	GCWGC	7 cut(s)	589, 1109, 1469, 1832, 1886, 1889, 1946
Tsp45I	GTSAC	3 cut(s)	86, 1593, 1798
TspGWI	ACGGA	1 cut(s)	1786
TspRI	CASTG	5 cut(s)	1221, 1303, 1456, 1495, 1692
VneI	GTGCAC	1 cut(s)	1260
VpaK11BI	GGWCC	4 cut(s)	599, 680, 1439, 1655
XapI	RAATTY	3 cut(s)	455, 1044, 1669
XceI	RCATGY	5 cut(s)	71, 551, 578, 791, 1428
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1381
XmaJI	CCTAGG	1 cut(s)	487
ZraI	GACGTC	1 cut(s)	983
Zsp2I	ATGCAT	1 cut(s)	1588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.