Rorug04G0435800

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
59333585 .. 59336847
3263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0435800.1

Sequence Viewer

Length: 1026 bp
ATGTCACTTTCATGCTCAGACTGCTTCTCCGACCTACTCTGCGGCGAGGACTCCTCCGGAATCCTGTCCGGAGAGTCGCCGGAATGCTCGTCGGACATAGAATCTCCGGCGTGCAGCGAGGAATCCATCGCCGGATTCATCGAAGACGAACGCAAGTTTGTCCCCGGGTTTGACTACTTGGCTAGATTTCAGTCTCACTCCCTCGATATCTCCGCCAGAACCGATTCCGTTGCATGGATTCTGAAGGTCCAAACCTTCTACGGATTTCATCCACTAACGGCGTATCTCTCCGTCAACTACTTGGATCGGTTCTTATATTCCCGCCGGTTGCCGCAAGCAAATGGGTGGCCAATGCAACTTTTAAGTGTTGCATGCTTGTCATTAGCTGCCAAGATGGAGGAACCCCTGGTTCCTTCGTTGTTGGATCTGCAGGTTGAAGGTGCGAAGTTTATTTTCGAACCCAGAACAATCCGAAGAATGGAGCTTCTAGTGCTGAGTGTTTTGGACTGGAGGCTACGATCTGTAACACCATTCTGCTTCATCGCTTTCTTTGCGTTCAAGCTCGATTCAATTGGAACCTTCGTTGACTTTCTTATTCAACGGGCCACAGAAATCATTTTAGCGAATATCCAAGAGGCTAGCTTTCTTGAATACTGGCCATCATGCATTGCTGCAGCAGCAATACTTTCTGCGGCTAATGAAATCCCGAATCTATCCCTTGAAAATCCGGAGCATGCTGAATCATGGTGTGATGGACTAAGCAAAGAGAAGATAATCGGCTGCTACCGATTAATGCAAGAACTGGTGCTGCAGAATAATCGGAAAAATAAGTCGCCTACTATTGTGTTACCACAGCTTCGGGTTACAGTTCGGGCCAGAATGAGGTCAAGTACTCCTACTACTGACTCATCCTCGTCCTTCTCATTATCATCATCCTCCTCGTCATCACCATTATCATCGTCGTATAAGAAGCGGAAATTAAATAACTGCTTGTGGGTAGATGATGACAAAGGAAGCTCCGAGTAA

Protein Analysis

341

Amino Acids

38.08

Weight (kDa)

5.07

Isoelectric Point (pI)

65.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cyclin_N PF00134 45 - 173 1.4e-27 Cyclin, N-terminal domain
Cyclin_C PF02984 175 - 276 1.1e-12 Cyclin, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 421
AccIII TCCGGA 3 cut(s) 56, 68, 727
AciI CCGC 6 cut(s) 42, 213, 322, 332, 692, 973
AclWI GGATC 2 cut(s) 312, 432
AcoI YGGCCR 2 cut(s) 347, 656
AcuI CTGAAG 1 cut(s) 263
AfaI GTAC 1 cut(s) 892
AfiI CCNNNNNNNGG 3 cut(s) 234, 478, 882
AgsI TTSAA 6 cut(s) 437, 559, 570, 599, 650, 722
AjnI CCWGG 1 cut(s) 405
AluBI AGCT 6 cut(s) 386, 484, 562, 642, 856, 1017
AluI AGCT 6 cut(s) 386, 484, 562, 642, 856, 1017
Alw26I GTCTC 1 cut(s) 198
AlwI GGATC 2 cut(s) 312, 432
Ama87I CYCGRG 1 cut(s) 164
Aor13HI TCCGGA 3 cut(s) 56, 68, 727
AoxI GGCC 4 cut(s) 347, 603, 656, 873
ApeKI GCWGC 7 cut(s) 114, 386, 671, 674, 677, 780, 808
AseI ATTAAT 1 cut(s) 791
Asp700I GAANNNNTTC 1 cut(s) 223
AspS9I GGNCC 3 cut(s) 247, 603, 873
AsuC2I CCSGG 2 cut(s) 165, 166
AsuHPI GGTGA 1 cut(s) 939
AsuII TTCGAA 1 cut(s) 456
AsuNHI GCTAGC 1 cut(s) 638
AvaI CYCGRG 1 cut(s) 164
AvaII GGWCC 1 cut(s) 247
BalI TGGCCA 2 cut(s) 349, 658
BbsI GAAGAC 1 cut(s) 150
BbvI GCAGC 7 cut(s) 126, 373, 658, 686, 689, 767, 795
BccI CCATC 4 cut(s) 134, 388, 667, 746
BceAI ACGGC 1 cut(s) 294
BcgI CGANNNNNNTGC 4 cut(s) 212, 246, 800, 834
BciT130I CCWGG 1 cut(s) 407
BcnI CCSGG 2 cut(s) 165, 166
BcoDI GTCTC 1 cut(s) 198
BfaI CTAG 3 cut(s) 183, 488, 639
BfmI CTRYAG 3 cut(s) 428, 672, 809
BfuAI ACCTGC 1 cut(s) 421
BmcAI AGTACT 1 cut(s) 892
Bme1390I CCNGG 3 cut(s) 165, 166, 407
Bme18I GGWCC 1 cut(s) 247
BmeT110I CYCGRG 1 cut(s) 164
BmgT120I GGNCC 3 cut(s) 247, 603, 873
BmiI GGNNCC 3 cut(s) 402, 411, 577
BmrFI CCNGG 3 cut(s) 165, 166, 407
BmtI GCTAGC 1 cut(s) 642
BpiI GAAGAC 1 cut(s) 150
BplI GAGNNNNNCTC 2 cut(s) 38, 70
BpmI CTGGAG 1 cut(s) 529
Bpu14I TTCGAA 1 cut(s) 456
BpuMI CCSGG 2 cut(s) 165, 166
BsaJI CCNNGG 3 cut(s) 163, 164, 405
BsaWI WCCGGW 3 cut(s) 56, 68, 727
BsaXI ACNNNNNCTCC 2 cut(s) 11, 41
Bsc4I CCNNNNNNNGG 3 cut(s) 234, 478, 882
Bse118I RCCGGY 1 cut(s) 324
Bse1I ACTGG 3 cut(s) 512, 659, 807
Bse3DI GCAATG 1 cut(s) 666
BseAI TCCGGA 3 cut(s) 56, 68, 727
BseBI CCWGG 1 cut(s) 407
BseDI CCNNGG 3 cut(s) 163, 164, 405
BseGI GGATG 3 cut(s) 268, 908, 932
BseLI CCNNNNNNNGG 3 cut(s) 234, 478, 882
BseMI GCAATG 1 cut(s) 666
BseMII CTCAG 2 cut(s) 30, 485
BseNI ACTGG 3 cut(s) 512, 659, 807
BseRI GAGGAG 2 cut(s) 43, 928
BseXI GCAGC 7 cut(s) 126, 373, 658, 686, 689, 767, 795
BsgI GTGCAG 1 cut(s) 133
BshFI GGCC 4 cut(s) 349, 605, 658, 875
BsiHKCI CYCGRG 1 cut(s) 164
BsiSI CCGG 8 cut(s) 57, 69, 80, 107, 132, 165, 325, 728
BslFI GGGAC 1 cut(s) 146
BslI CCNNNNNNNGG 3 cut(s) 234, 478, 882
BsmAI GTCTC 1 cut(s) 198
BsmFI GGGAC 1 cut(s) 146
BsmI GAATGC 1 cut(s) 89
BsnI GGCC 4 cut(s) 349, 605, 658, 875
BsoBI CYCGRG 1 cut(s) 164
Bsp119I TTCGAA 1 cut(s) 456
Bsp13I TCCGGA 3 cut(s) 56, 68, 727
Bsp143I GATC 3 cut(s) 304, 424, 518
BspACI CCGC 6 cut(s) 42, 213, 322, 332, 692, 973
BspANI GGCC 4 cut(s) 349, 605, 658, 875
BspCNI CTCAG 2 cut(s) 29, 486
BspEI TCCGGA 3 cut(s) 56, 68, 727
BspLI GGNNCC 3 cut(s) 402, 411, 577
BspMAI CTGCAG 3 cut(s) 432, 676, 813
BspMI ACCTGC 1 cut(s) 421
BspOI GCTAGC 1 cut(s) 642
BspPI GGATC 2 cut(s) 312, 432
BspT104I TTCGAA 1 cut(s) 456
BsrDI GCAATG 1 cut(s) 666
BsrFI RCCGGY 1 cut(s) 324
BsrI ACTGG 3 cut(s) 512, 659, 807
BssAI RCCGGY 1 cut(s) 324
BssECI CCNNGG 3 cut(s) 163, 164, 405
BssMI GATC 3 cut(s) 304, 424, 518
Bst2UI CCWGG 1 cut(s) 407
Bst4CI ACNGT 1 cut(s) 868
BstBI TTCGAA 1 cut(s) 456
BstC8I GCNNGC 5 cut(s) 112, 336, 373, 640, 735
BstDEI CTNAG 3 cut(s) 16, 494, 758
BstF5I GGATG 3 cut(s) 268, 908, 932
BstKTI GATC 3 cut(s) 307, 427, 521
BstMAI GTCTC 1 cut(s) 198
BstMBI GATC 3 cut(s) 304, 424, 518
BstMWI GCNNNNNNNGC 4 cut(s) 21, 490, 551, 677
BstNI CCWGG 1 cut(s) 407
BstNSI RCATGY 2 cut(s) 375, 737
BstSCI CCNGG 3 cut(s) 163, 164, 405
BstSFI CTRYAG 3 cut(s) 428, 672, 809
BstV1I GCAGC 7 cut(s) 126, 373, 658, 686, 689, 767, 795
BstV2I GAAGAC 1 cut(s) 150
BstX2I RGATCY 1 cut(s) 424
BstYI RGATCY 1 cut(s) 424
BsuRI GGCC 4 cut(s) 349, 605, 658, 875
BtgZI GCGATG 2 cut(s) 112, 526
BtsCI GGATG 3 cut(s) 268, 908, 932
BveI ACCTGC 1 cut(s) 421
Cac8I GCNNGC 5 cut(s) 112, 336, 373, 640, 735
Cfr10I RCCGGY 1 cut(s) 324
Cfr13I GGNCC 3 cut(s) 247, 603, 873
Cfr9I CCCGGG 1 cut(s) 164
Csp6I GTAC 1 cut(s) 891
CviAII CATG 6 cut(s) 12, 234, 372, 663, 734, 744
CviQI GTAC 1 cut(s) 891
DdeI CTNAG 3 cut(s) 16, 494, 758
DpnI GATC 3 cut(s) 306, 426, 520
DpnII GATC 3 cut(s) 304, 424, 518
EaeI YGGCCR 2 cut(s) 347, 656
EciI GGCGGA 1 cut(s) 202
Eco32I GATATC 1 cut(s) 208
Eco47I GGWCC 1 cut(s) 247
Eco57I CTGAAG 1 cut(s) 263
Eco88I CYCGRG 1 cut(s) 164
EcoRII CCWGG 1 cut(s) 405
EcoRV GATATC 1 cut(s) 208
EcoT22I ATGCAT 1 cut(s) 668
FaeI CATG 6 cut(s) 15, 237, 375, 666, 737, 747
FaiI YATR 9 cut(s) 13, 98, 235, 316, 373, 664, 735, 745, 966
FaqI GGGAC 1 cut(s) 146
FatI CATG 6 cut(s) 11, 233, 371, 662, 733, 743
FauI CCCGC 1 cut(s) 329
FokI GGATG 3 cut(s) 255, 895, 919
FspBI CTAG 3 cut(s) 183, 488, 639
GsuI CTGGAG 1 cut(s) 529
HaeIII GGCC 4 cut(s) 349, 605, 658, 875
HapII CCGG 8 cut(s) 57, 69, 80, 107, 132, 165, 325, 728
Hin1II CATG 6 cut(s) 15, 237, 375, 666, 737, 747
HincII GTYRAC 2 cut(s) 295, 586
HindII GTYRAC 2 cut(s) 295, 586
HpaII CCGG 8 cut(s) 57, 69, 80, 107, 132, 165, 325, 728
HphI GGTGA 1 cut(s) 939
Hpy166II GTNNAC 2 cut(s) 295, 586
Hpy188I TCNGA 7 cut(s) 19, 31, 94, 243, 473, 822, 1021
Hpy188III TCNNGA 5 cut(s) 57, 69, 647, 706, 728
Hpy8I GTNNAC 2 cut(s) 295, 586
Hpy99I CGWCG 2 cut(s) 94, 964
HpyAV CCTTC 6 cut(s) 238, 265, 423, 431, 589, 928
HpyCH4III ACNGT 1 cut(s) 868
HpyCH4V TGCA 9 cut(s) 114, 233, 355, 371, 430, 666, 674, 796, 811
HpyF10VI GCNNNNNNNGC 4 cut(s) 21, 490, 551, 677
HpyF3I CTNAG 3 cut(s) 16, 494, 758
Hsp92II CATG 6 cut(s) 15, 237, 375, 666, 737, 747
Kpn2I TCCGGA 3 cut(s) 56, 68, 727
Kzo9I GATC 3 cut(s) 304, 424, 518
LmnI GCTCC 3 cut(s) 481, 730, 1022
Lsp1109I GCAGC 7 cut(s) 126, 373, 658, 686, 689, 767, 795
MaeI CTAG 3 cut(s) 183, 488, 639
MaeIII GTNAC 4 cut(s) 3, 523, 846, 862
MalI GATC 3 cut(s) 306, 426, 520
MboI GATC 3 cut(s) 304, 424, 518
MboII GAAGA 3 cut(s) 155, 486, 781
MfeI CAATTG 1 cut(s) 570
MflI RGATCY 1 cut(s) 424
MlsI TGGCCA 2 cut(s) 349, 658
MluCI AATT 2 cut(s) 570, 977
MluNI TGGCCA 2 cut(s) 349, 658
MlyI GAGTC 3 cut(s) 44, 83, 899
MmeI TCCRAC 3 cut(s) 54, 72, 402
Mox20I TGGCCA 2 cut(s) 349, 658
Mph1103I ATGCAT 1 cut(s) 668
MroI TCCGGA 3 cut(s) 56, 68, 727
MroXI GAANNNNTTC 1 cut(s) 223
MscI TGGCCA 2 cut(s) 349, 658
MseI TTAA 3 cut(s) 362, 791, 980
MslI CAYNNNNRTG 1 cut(s) 10
Msp20I TGGCCA 2 cut(s) 349, 658
MspI CCGG 8 cut(s) 57, 69, 80, 107, 132, 165, 325, 728
MspR9I CCNGG 3 cut(s) 165, 166, 407
MunI CAATTG 1 cut(s) 570
Mva1269I GAATGC 1 cut(s) 89
MvaI CCWGG 1 cut(s) 407
MwoI GCNNNNNNNGC 4 cut(s) 21, 490, 551, 677
NciI CCSGG 2 cut(s) 165, 166
NdeII GATC 3 cut(s) 304, 424, 518
NheI GCTAGC 1 cut(s) 638
NlaIII CATG 6 cut(s) 15, 237, 375, 666, 737, 747
NlaIV GGNNCC 3 cut(s) 402, 411, 577
NmuCI GTSAC 1 cut(s) 3
NsiI ATGCAT 1 cut(s) 668
NspI RCATGY 2 cut(s) 375, 737
NspV TTCGAA 1 cut(s) 456
PaeI GCATGC 2 cut(s) 375, 737
PctI GAATGC 1 cut(s) 89
PdmI GAANNNNTTC 1 cut(s) 223
PfeI GAWTC 9 cut(s) 60, 101, 122, 135, 224, 238, 566, 709, 740
PleI GAGTC 3 cut(s) 44, 82, 899
PpsI GAGTC 3 cut(s) 44, 82, 899
PshBI ATTAAT 1 cut(s) 791
Psp6I CCWGG 1 cut(s) 405
PspGI CCWGG 1 cut(s) 405
PspN4I GGNNCC 3 cut(s) 402, 411, 577
PspPI GGNCC 3 cut(s) 247, 603, 873
PstI CTGCAG 3 cut(s) 432, 676, 813
PsuI RGATCY 1 cut(s) 424
RsaI GTAC 1 cut(s) 892
RsaNI GTAC 1 cut(s) 891
RseI CAYNNNNRTG 1 cut(s) 10
SaqAI TTAA 3 cut(s) 362, 791, 980
Sau3AI GATC 3 cut(s) 304, 424, 518
Sau96I GGNCC 3 cut(s) 247, 603, 873
ScaI AGTACT 1 cut(s) 892
SchI GAGTC 3 cut(s) 44, 83, 899
ScrFI CCNGG 3 cut(s) 165, 166, 407
SfcI CTRYAG 3 cut(s) 428, 672, 809
SfuI TTCGAA 1 cut(s) 456
SinI GGWCC 1 cut(s) 247
SmaI CCCGGG 1 cut(s) 166
SmiMI CAYNNNNRTG 1 cut(s) 10
SphI GCATGC 2 cut(s) 375, 737
Sse9I AATT 2 cut(s) 570, 977
SsiI CCGC 6 cut(s) 42, 213, 322, 332, 692, 973
SspMI CTAG 3 cut(s) 183, 488, 639
StyD4I CCNGG 3 cut(s) 163, 164, 405
TaaI ACNGT 1 cut(s) 868
TaqI TCGA 4 cut(s) 141, 204, 456, 564
TasI AATT 2 cut(s) 570, 977
TatI WGTACW 1 cut(s) 890
TauI GCSGC 3 cut(s) 45, 334, 695
TfiI GAWTC 9 cut(s) 60, 101, 122, 135, 224, 238, 566, 709, 740
Tru1I TTAA 3 cut(s) 362, 791, 980
Tru9I TTAA 3 cut(s) 362, 791, 980
TseFI GTSAC 1 cut(s) 3
TseI GCWGC 7 cut(s) 114, 386, 671, 674, 677, 780, 808
Tsp45I GTSAC 1 cut(s) 3
TspDTI ATGAA 4 cut(s) 127, 257, 529, 714
TspGWI ACGGA 3 cut(s) 217, 276, 280
TspMI CCCGGG 1 cut(s) 164
VpaK11BI GGWCC 1 cut(s) 247
VspI ATTAAT 1 cut(s) 791
XceI RCATGY 2 cut(s) 375, 737
XmaI CCCGGG 1 cut(s) 164
XmnI GAANNNNTTC 1 cut(s) 223
XspI CTAG 3 cut(s) 183, 488, 639
ZrmI AGTACT 1 cut(s) 892
Zsp2I ATGCAT 1 cut(s) 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.