Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000232

Physical Location & Seq

Genomic Coordinates Forward (+)

25270960 .. 25273275

Gene Structure 2316 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1143000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 912 bp

ATGCCTAAATTAAATTGCAGTCCTTGTTACAAAGTCAACAACACGAGTCTTTTTTTCTTTTTCTTACTTTTCGTGAAACATGTGGCCTGGTGTAAAATAATAATAGGAATTTCATTAGCTGACAAGTCATACAAAACTAAGCAGACTTTTCCAAAAAAAAAAAAAAAAAAAAAAACTAAGCAGACACGAACATTCCCGCTTCAACTCCCTCAACCCTCAACCCTAAACCCAAACTTTACACACCATTCAATCCCTGTTGACTTATCCGAAACCGAGGTGACCATGAAGGATGCCAACGTTATTCTTTCTTGTCTCAATGCTAGATGTGTCGAGCCTTTCAAAGAATGTCTGGCCAGATTGTTGTCAGATGACTGTAATTCAGAGCACCCGGTTGCTTGCTTGATCTCCGACACTTACTTTCACTTCACTCGATCCCTTGCGGAAAGCTTTAAGCTTCCAAGGATCATGTTAGAGACCTCGGATTGGCTTAAAGTGTTGCCTAACAAGTTTTTAGAAGAATTCAACGAGAGAGCTTACATTGTGAAATGGGCCCCACAAAAAGAAGTGCTGGCTCACCCGTCAGTCGGAGCCTTTTGGACTCACAGTGGTTGGAATTCTACATTGGAGAGCATTAGTGAGGGGATCCCTATGATTTGCACGCCATTTTTTAGTGAACAAATGGTGAATGCAAGAAATGTGAGGGATGTTTGGAAGGTAGGGCTGCAGTTGGAGCATGGGATTGAGAGAGGTGAGGTTGAAAGAACAATTAGAATACTGATGGTTGAGAAAGAAGGGGAAGAGATCAAAGAGAGAGCCTTAAAGTTAATGGAAAAGGCAAATCTTTGCCTCAAAGAAGGTGGCTCTTCGTGCCAATCTTTGGCTGGCTTGGTTAATCACATTTTATCATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0047254 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204

Pfam Domains

Protein Families

UDPGT

Protein Analysis

304

Amino Acids

34.64

Weight (kDa)

8.79

Isoelectric Point (pI)

41.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	175 - 260	7.2e-24	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55700 AT3G55710
fragaria_vesca	FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica	MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica	Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis	pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis	RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata	RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora	Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii	Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa	Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha	Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana	Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	910
AccB7I	CCANNNNNTGG	1 cut(s)	877
AciI	CCGC	2 cut(s)	197, 440
AclI	AACGTT	1 cut(s)	297
AclWI	GGATC	4 cut(s)	426, 470, 637, 650
AcoI	YGGCCR	1 cut(s)	351
AcsI	RAATTY	3 cut(s)	108, 518, 613
AfiI	CCNNNNNNNGG	3 cut(s)	483, 584, 877
AflIII	ACRYGT	1 cut(s)	79
AgsI	TTSAA	5 cut(s)	203, 249, 340, 523, 758
AjnI	CCWGG	1 cut(s)	86
AjuI	GAANNNNNNNTTGG	2 cut(s)	605, 637
AluBI	AGCT	4 cut(s)	119, 447, 454, 533
AluI	AGCT	4 cut(s)	119, 447, 454, 533
Alw21I	GWGCWC	1 cut(s)	387
Alw26I	GTCTC	2 cut(s)	317, 467
AlwI	GGATC	4 cut(s)	426, 470, 637, 650
AoxI	GGCC	3 cut(s)	84, 351, 549
ApaI	GGGCCC	1 cut(s)	553
ApeKI	GCWGC	1 cut(s)	721
ApoI	RAATTY	3 cut(s)	108, 518, 613
AspS9I	GGNCC	2 cut(s)	549, 550
AsuC2I	CCSGG	1 cut(s)	389
AsuHPI	GGTGA	4 cut(s)	289, 566, 694, 761
BaeGI	GKGCMC	1 cut(s)	553
BalI	TGGCCA	1 cut(s)	353
BamHI	GGATCC	1 cut(s)	642
BanII	GRGCYC	1 cut(s)	553
BauI	CACGAG	1 cut(s)	43
Bbv12I	GWGCWC	1 cut(s)	387
BbvI	GCAGC	1 cut(s)	708
BccI	CCATC	1 cut(s)	772
BciT130I	CCWGG	1 cut(s)	88
BcnI	CCSGG	1 cut(s)	389
BcoDI	GTCTC	2 cut(s)	317, 467
BfaI	CTAG	1 cut(s)	321
BfmI	CTRYAG	1 cut(s)	722
BisI	GCNGC	1 cut(s)	722
BlsI	GCNGC	1 cut(s)	723
Bme1390I	CCNGG	2 cut(s)	88, 389
BmgT120I	GGNCC	2 cut(s)	549, 550
BmiI	GGNNCC	4 cut(s)	551, 552, 589, 644
BmrFI	CCNGG	2 cut(s)	88, 389
BmsI	GCATC	1 cut(s)	280
BpuMI	CCSGG	1 cut(s)	389
BsaI	GGTCTC	1 cut(s)	467
BsaJI	CCNNGG	3 cut(s)	273, 458, 477
Bsc4I	CCNNNNNNNGG	3 cut(s)	483, 584, 877
BseBI	CCWGG	1 cut(s)	88
BseDI	CCNNGG	3 cut(s)	273, 458, 477
BseGI	GGATG	2 cut(s)	295, 709
BseLI	CCNNNNNNNGG	3 cut(s)	483, 584, 877
BseSI	GKGCMC	1 cut(s)	553
BseXI	GCAGC	1 cut(s)	708
BshFI	GGCC	3 cut(s)	86, 353, 551
BsiHKAI	GWGCWC	1 cut(s)	387
BsiSI	CCGG	1 cut(s)	389
BslI	CCNNNNNNNGG	3 cut(s)	483, 584, 877
BsmAI	GTCTC	2 cut(s)	317, 467
BsmI	GAATGC	1 cut(s)	691
BsnI	GGCC	3 cut(s)	86, 353, 551
Bso31I	GGTCTC	1 cut(s)	467
Bsp120I	GGGCCC	1 cut(s)	549
Bsp1286I	GDGCHC	2 cut(s)	387, 553
Bsp143I	GATC	5 cut(s)	402, 431, 462, 642, 801
BspACI	CCGC	2 cut(s)	197, 440
BspANI	GGCC	3 cut(s)	86, 353, 551
BspLI	GGNNCC	4 cut(s)	551, 552, 589, 644
BspMAI	CTGCAG	1 cut(s)	726
BspPI	GGATC	4 cut(s)	426, 470, 637, 650
BspQI	GCTCTTC	1 cut(s)	868
BspTNI	GGTCTC	1 cut(s)	467
BssECI	CCNNGG	3 cut(s)	273, 458, 477
BssMI	GATC	5 cut(s)	402, 431, 462, 642, 801
BssSI	CACGAG	1 cut(s)	43
BssT1I	CCWWGG	1 cut(s)	458
Bst2BI	CACGAG	1 cut(s)	43
Bst2UI	CCWGG	1 cut(s)	88
Bst4CI	ACNGT	2 cut(s)	374, 605
Bst6I	CTCTTC	2 cut(s)	792, 868
BstC8I	GCNNGC	4 cut(s)	397, 570, 659, 883
BstDEI	CTNAG	2 cut(s)	138, 177
BstEII	GGTNACC	1 cut(s)	277
BstF5I	GGATG	2 cut(s)	295, 709
BstKTI	GATC	5 cut(s)	405, 434, 465, 645, 804
BstMAI	GTCTC	2 cut(s)	317, 467
BstMBI	GATC	5 cut(s)	402, 431, 462, 642, 801
BstMWI	GCNNNNNNNGC	2 cut(s)	730, 867
BstNI	CCWGG	1 cut(s)	88
BstNSI	RCATGY	1 cut(s)	83
BstPI	GGTNACC	1 cut(s)	277
BstSCI	CCNGG	2 cut(s)	86, 387
BstSFI	CTRYAG	1 cut(s)	722
BstSLI	GKGCMC	1 cut(s)	553
BstV1I	GCAGC	1 cut(s)	708
BstX2I	RGATCY	1 cut(s)	642
BstYI	RGATCY	1 cut(s)	642
BsuRI	GGCC	3 cut(s)	86, 353, 551
BtsCI	GGATG	2 cut(s)	295, 709
BtsIMutI	CAGTG	1 cut(s)	610
Cac8I	GCNNGC	4 cut(s)	397, 570, 659, 883
Cfr13I	GGNCC	2 cut(s)	549, 550
CspCI	CAANNNNNGTGG	2 cut(s)	838, 873
CviAII	CATG	4 cut(s)	80, 283, 466, 734
DdeI	CTNAG	2 cut(s)	138, 177
DpnI	GATC	5 cut(s)	404, 433, 464, 644, 803
DpnII	GATC	5 cut(s)	402, 431, 462, 642, 801
EaeI	YGGCCR	1 cut(s)	351
Eam1104I	CTCTTC	2 cut(s)	792, 868
EarI	CTCTTC	2 cut(s)	792, 868
Eco130I	CCWWGG	1 cut(s)	458
Eco24I	GRGCYC	1 cut(s)	553
Eco31I	GGTCTC	1 cut(s)	467
Eco91I	GGTNACC	1 cut(s)	277
EcoO109I	RGGNCCY	1 cut(s)	550
EcoO65I	GGTNACC	1 cut(s)	277
EcoRI	GAATTC	2 cut(s)	518, 613
EcoRII	CCWGG	1 cut(s)	86
EcoT14I	CCWWGG	1 cut(s)	458
EcoT38I	GRGCYC	1 cut(s)	553
ErhI	CCWWGG	1 cut(s)	458
FaeI	CATG	4 cut(s)	83, 286, 469, 737
FaiI	YATR	7 cut(s)	81, 130, 284, 467, 650, 735, 910
FatI	CATG	4 cut(s)	79, 282, 465, 733
FauI	CCCGC	1 cut(s)	204
Fnu4HI	GCNGC	1 cut(s)	722
FokI	GGATG	2 cut(s)	302, 716
FriOI	GRGCYC	1 cut(s)	553
Fsp4HI	GCNGC	1 cut(s)	722
FspBI	CTAG	1 cut(s)	321
GluI	GCNGC	1 cut(s)	722
HaeIII	GGCC	3 cut(s)	86, 353, 551
HapII	CCGG	1 cut(s)	389
Hin1II	CATG	4 cut(s)	83, 286, 469, 737
HincII	GTYRAC	2 cut(s)	37, 259
HindII	GTYRAC	2 cut(s)	37, 259
HindIII	AAGCTT	2 cut(s)	445, 452
HinfI	GANTC	2 cut(s)	46, 598
HpaII	CCGG	1 cut(s)	389
HphI	GGTGA	4 cut(s)	289, 566, 694, 761
Hpy166II	GTNNAC	3 cut(s)	37, 259, 674
Hpy188I	TCNGA	6 cut(s)	268, 367, 382, 409, 481, 587
Hpy188III	TCNNGA	1 cut(s)	73
Hpy8I	GTNNAC	3 cut(s)	37, 259, 674
HpyAV	CCTTC	4 cut(s)	280, 706, 785, 848
HpyCH4III	ACNGT	2 cut(s)	374, 605
HpyCH4IV	ACGT	1 cut(s)	297
HpyCH4V	TGCA	4 cut(s)	18, 657, 689, 724
HpyF10VI	GCNNNNNNNGC	2 cut(s)	730, 867
HpyF3I	CTNAG	2 cut(s)	138, 177
HpySE526I	ACGT	1 cut(s)	297
Hsp92II	CATG	4 cut(s)	83, 286, 469, 737
Kzo9I	GATC	5 cut(s)	402, 431, 462, 642, 801
LguI	GCTCTTC	1 cut(s)	868
LmnI	GCTCC	2 cut(s)	587, 730
LpnPI	CCDG	8 cut(s)	73, 100, 267, 335, 367, 402, 554, 867
Lsp1109I	GCAGC	1 cut(s)	708
LweI	GCATC	1 cut(s)	280
MaeI	CTAG	1 cut(s)	321
MaeII	ACGT	1 cut(s)	297
MaeIII	GTNAC	2 cut(s)	26, 277
MalI	GATC	5 cut(s)	404, 433, 464, 644, 803
MboI	GATC	5 cut(s)	402, 431, 462, 642, 801
MboII	GAAGA	3 cut(s)	527, 809, 855
MflI	RGATCY	1 cut(s)	642
MhlI	GDGCHC	2 cut(s)	387, 553
MlsI	TGGCCA	1 cut(s)	353
MluCI	AATT	7 cut(s)	8, 13, 108, 376, 518, 613, 765
MluNI	TGGCCA	1 cut(s)	353
MlyI	GAGTC	2 cut(s)	55, 592
MmeI	TCCRAC	4 cut(s)	432, 565, 590, 708
MnlI	CCTC	9 cut(s)	219, 226, 268, 487, 631, 693, 740, 745, 857
Mox20I	TGGCCA	1 cut(s)	353
MscI	TGGCCA	1 cut(s)	353
MseI	TTAA	6 cut(s)	11, 450, 489, 818, 824, 891
Msp20I	TGGCCA	1 cut(s)	353
MspI	CCGG	1 cut(s)	389
MspR9I	CCNGG	2 cut(s)	88, 389
Mva1269I	GAATGC	1 cut(s)	691
MvaI	CCWGG	1 cut(s)	88
MwoI	GCNNNNNNNGC	2 cut(s)	730, 867
NciI	CCSGG	1 cut(s)	389
NdeII	GATC	5 cut(s)	402, 431, 462, 642, 801
NlaIII	CATG	4 cut(s)	83, 286, 469, 737
NlaIV	GGNNCC	4 cut(s)	551, 552, 589, 644
NmuCI	GTSAC	1 cut(s)	277
NspI	RCATGY	1 cut(s)	83
PciI	ACATGT	1 cut(s)	79
PciSI	GCTCTTC	1 cut(s)	868
PctI	GAATGC	1 cut(s)	691
PflMI	CCANNNNNTGG	1 cut(s)	877
PkrI	GCNGC	1 cut(s)	723
PleI	GAGTC	2 cut(s)	54, 592
PpsI	GAGTC	2 cut(s)	54, 592
PscI	ACATGT	1 cut(s)	79
PsiI	TTATAA	1 cut(s)	910
Psp1406I	AACGTT	1 cut(s)	297
Psp6I	CCWGG	1 cut(s)	86
PspEI	GGTNACC	1 cut(s)	277
PspGI	CCWGG	1 cut(s)	86
PspN4I	GGNNCC	4 cut(s)	551, 552, 589, 644
PspOMI	GGGCCC	1 cut(s)	549
PspPI	GGNCC	2 cut(s)	549, 550
PstI	CTGCAG	1 cut(s)	726
PsuI	RGATCY	1 cut(s)	642
SapI	GCTCTTC	1 cut(s)	868
SaqAI	TTAA	6 cut(s)	11, 450, 489, 818, 824, 891
SatI	GCNGC	1 cut(s)	722
Sau3AI	GATC	5 cut(s)	402, 431, 462, 642, 801
Sau96I	GGNCC	2 cut(s)	549, 550
SchI	GAGTC	2 cut(s)	55, 592
ScrFI	CCNGG	2 cut(s)	88, 389
SduI	GDGCHC	2 cut(s)	387, 553
SfaNI	GCATC	1 cut(s)	280
SfcI	CTRYAG	1 cut(s)	722
Sse9I	AATT	7 cut(s)	8, 13, 108, 376, 518, 613, 765
SsiI	CCGC	2 cut(s)	197, 440
SspMI	CTAG	1 cut(s)	321
StyD4I	CCNGG	2 cut(s)	86, 387
StyI	CCWWGG	1 cut(s)	458
TaaI	ACNGT	2 cut(s)	374, 605
TaiI	ACGT	1 cut(s)	300
TaqI	TCGA	2 cut(s)	330, 430
TasI	AATT	7 cut(s)	8, 13, 108, 376, 518, 613, 765
Tru1I	TTAA	6 cut(s)	11, 450, 489, 818, 824, 891
Tru9I	TTAA	6 cut(s)	11, 450, 489, 818, 824, 891
TscAI	CASTG	1 cut(s)	610
TseFI	GTSAC	1 cut(s)	277
TseI	GCWGC	1 cut(s)	721
Tsp45I	GTSAC	1 cut(s)	277
TspDTI	ATGAA	2 cut(s)	102, 299
TspRI	CASTG	1 cut(s)	610
Van91I	CCANNNNNTGG	1 cut(s)	877
XapI	RAATTY	3 cut(s)	108, 518, 613
XceI	RCATGY	1 cut(s)	83
XcmI	CCANNNNNNNNNTGG	1 cut(s)	878
XspI	CTAG	1 cut(s)	321

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.