Rorug07G0021400
MYB Family

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
1564756 .. 1567369
2614 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0021400.1

Sequence Viewer

Length: 705 bp
ATGGTTAGCTTGGACAGTGTGCTGGTAGCAGCGGGTCTGTTTGTGTTGGGAATATACCATGTTTGGCTATTCATCACAGTTCTGCACAATCCCATAAGAACTGTCATTGGCCTCAATGCTTACACTCGTCAACAATGGGTCTTCTCCATGATGACTGACCCCTTGAAGAATGGTGTTTTGATTGTACAAACTTTACGCAACAACATAATGGCATCGACACTTTTGTCCACAGCAGCAATTACTCTTTGTTCGGTGATCAGTGTACTTGTGAGCAGCGAATCCAGCTCCGATAGCACTGTATCAGTACACTTGGTTTACTCCGACTACACTCCCTCCTTACCTTCAATCAACTTCTTAGGTACCGTCCCAACATGGAAAGACAAGACAGGTTTCATTGAGTATGTTGCGGCAACTTTGAATCGAGGATACTACTTTTGGGCCCTTGGATTGCGAGCATTCTACCTCTCGATTCCTCTCTTTCTCTGGATCTTCGGGCCAATACCCATGTTTGTTAGTTGCTGTGTATTGTCAATTGTTCTCTATTTCTTGGACACTACCTCCAGCTTTGCACAACTTATTCATACCCAATTGTTCAAGGAGGAATCAAGAACCGCTGATGTGGAGTCGACCGCTCAATCATTGAACAATTCTGGTCGTGAGAACTTCTCCCAACTTCGTGATCCTCTACTCACCAGGTCCGGCTAG

Protein Analysis

234

Amino Acids

26.03

Weight (kDa)

6.4

Isoelectric Point (pI)

32.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF599 PF04654 7 - 117 2.7e-24 Protein of unknown function, DUF599
DUF599 PF04654 119 - 188 8.7e-22 Protein of unknown function, DUF599
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 223
Acc65I GGTACC 1 cut(s) 359
AccB1I GGYRCC 1 cut(s) 359
AccBSI CCGCTC 1 cut(s) 632
AccI GTMKAC 1 cut(s) 626
AciI CCGC 4 cut(s) 32, 407, 612, 630
AclWI GGATC 2 cut(s) 494, 674
AfaI GTAC 4 cut(s) 186, 264, 306, 361
AgsI TTSAA 5 cut(s) 166, 345, 418, 595, 643
AjnI CCWGG 1 cut(s) 692
AluBI AGCT 3 cut(s) 9, 285, 564
AluI AGCT 3 cut(s) 9, 285, 564
AlwI GGATC 2 cut(s) 494, 674
AoxI GGCC 3 cut(s) 109, 438, 494
ApaI GGGCCC 1 cut(s) 442
ApeKI GCWGC 3 cut(s) 29, 233, 273
Asp718I GGTACC 1 cut(s) 359
AspS9I GGNCC 4 cut(s) 438, 439, 494, 696
AsuHPI GGTGA 2 cut(s) 265, 682
AvaII GGWCC 1 cut(s) 696
BaeGI GKGCMC 1 cut(s) 442
BanI GGYRCC 1 cut(s) 359
BanII GRGCYC 1 cut(s) 442
BbsI GAAGAC 1 cut(s) 133
BbvI GCAGC 3 cut(s) 41, 245, 285
BciT130I CCWGG 1 cut(s) 694
BciVI GTATCC 1 cut(s) 419
BclI TGATCA 1 cut(s) 255
BfaI CTAG 1 cut(s) 703
BfuI GTATCC 1 cut(s) 419
BisI GCNGC 4 cut(s) 30, 234, 274, 408
BlsI GCNGC 4 cut(s) 31, 235, 275, 409
Bme1390I CCNGG 1 cut(s) 694
Bme18I GGWCC 1 cut(s) 696
BmgT120I GGNCC 4 cut(s) 438, 439, 494, 696
BmiI GGNNCC 2 cut(s) 361, 440
BmrFI CCNGG 1 cut(s) 694
BmsI GCATC 1 cut(s) 221
BpiI GAAGAC 1 cut(s) 133
BplI GAGNNNNNCTC 2 cut(s) 650, 682
BpmI CTGGAG 1 cut(s) 544
BsaJI CCNNGG 1 cut(s) 442
BsaXI ACNNNNNCTCC 4 cut(s) 317, 347, 542, 572
BseBI CCWGG 1 cut(s) 694
BseDI CCNNGG 1 cut(s) 442
BseSI GKGCMC 1 cut(s) 442
BseXI GCAGC 3 cut(s) 41, 245, 285
BsgI GTGCAG 1 cut(s) 68
Bsh1285I CGRYCG 1 cut(s) 630
BshFI GGCC 3 cut(s) 111, 440, 496
BshNI GGYRCC 1 cut(s) 359
BsiEI CGRYCG 1 cut(s) 630
BsiSI CCGG 1 cut(s) 699
BslFI GGGAC 1 cut(s) 350
BsmFI GGGAC 1 cut(s) 350
BsmI GAATGC 1 cut(s) 455
BsnI GGCC 3 cut(s) 111, 440, 496
Bsp120I GGGCCC 1 cut(s) 438
Bsp1286I GDGCHC 1 cut(s) 442
Bsp1407I TGTACA 1 cut(s) 184
Bsp143I GATC 3 cut(s) 255, 486, 679
BspACI CCGC 4 cut(s) 32, 407, 612, 630
BspANI GGCC 3 cut(s) 111, 440, 496
BspLI GGNNCC 2 cut(s) 361, 440
BspPI GGATC 2 cut(s) 494, 674
BspT107I GGYRCC 1 cut(s) 359
BsrBI CCGCTC 1 cut(s) 632
BsrGI TGTACA 1 cut(s) 184
BssECI CCNNGG 1 cut(s) 442
BssMI GATC 3 cut(s) 255, 486, 679
BssT1I CCWWGG 1 cut(s) 442
Bst2UI CCWGG 1 cut(s) 694
Bst4CI ACNGT 5 cut(s) 17, 79, 103, 298, 364
BstAUI TGTACA 1 cut(s) 184
BstC8I GCNNGC 1 cut(s) 453
BstDEI CTNAG 1 cut(s) 355
BstKTI GATC 3 cut(s) 258, 489, 682
BstMBI GATC 3 cut(s) 255, 486, 679
BstMCI CGRYCG 1 cut(s) 630
BstMWI GCNNNNNNNGC 2 cut(s) 282, 291
BstNI CCWGG 1 cut(s) 694
BstSCI CCNGG 1 cut(s) 692
BstSLI GKGCMC 1 cut(s) 442
BstV1I GCAGC 3 cut(s) 41, 245, 285
BstV2I GAAGAC 1 cut(s) 133
BstX2I RGATCY 1 cut(s) 486
BstYI RGATCY 1 cut(s) 486
BsuI GTATCC 1 cut(s) 419
BsuRI GGCC 3 cut(s) 111, 440, 496
BtsIMutI CAGTG 3 cut(s) 22, 265, 294
Cac8I GCNNGC 1 cut(s) 453
Cfr13I GGNCC 4 cut(s) 438, 439, 494, 696
CsiI ACCWGGT 1 cut(s) 692
Csp6I GTAC 4 cut(s) 185, 263, 305, 360
CviAII CATG 4 cut(s) 59, 148, 372, 505
CviJI RGCY 8 cut(s) 9, 67, 111, 285, 440, 496, 564, 702
CviKI_1 RGCY 8 cut(s) 9, 67, 111, 285, 440, 496, 564, 702
CviQI GTAC 4 cut(s) 185, 263, 305, 360
DdeI CTNAG 1 cut(s) 355
DpnI GATC 3 cut(s) 257, 488, 681
DpnII GATC 3 cut(s) 255, 486, 679
DrdI GACNNNNNNGTC 1 cut(s) 223
DseDI GACNNNNNNGTC 1 cut(s) 223
Eco130I CCWWGG 1 cut(s) 442
Eco24I GRGCYC 1 cut(s) 442
Eco47I GGWCC 1 cut(s) 696
EcoO109I RGGNCCY 1 cut(s) 439
EcoRII CCWGG 1 cut(s) 692
EcoT14I CCWWGG 1 cut(s) 442
EcoT38I GRGCYC 1 cut(s) 442
ErhI CCWWGG 1 cut(s) 442
FaeI CATG 4 cut(s) 62, 151, 375, 508
FaiI YATR 9 cut(s) 55, 60, 95, 149, 206, 373, 402, 506, 582
FaqI GGGAC 1 cut(s) 350
FatI CATG 4 cut(s) 58, 147, 371, 504
FauI CCCGC 1 cut(s) 25
FbaI TGATCA 1 cut(s) 255
FblI GTMKAC 1 cut(s) 626
Fnu4HI GCNGC 4 cut(s) 30, 234, 274, 408
FriOI GRGCYC 1 cut(s) 442
Fsp4HI GCNGC 4 cut(s) 30, 234, 274, 408
FspBI CTAG 1 cut(s) 703
GluI GCNGC 4 cut(s) 30, 234, 274, 408
GsuI CTGGAG 1 cut(s) 544
HaeIII GGCC 3 cut(s) 111, 440, 496
HapII CCGG 1 cut(s) 699
Hin1II CATG 4 cut(s) 62, 151, 375, 508
HincII GTYRAC 2 cut(s) 131, 627
HindII GTYRAC 2 cut(s) 131, 627
HinfI GANTC 5 cut(s) 278, 418, 469, 602, 623
HpaII CCGG 1 cut(s) 699
HphI GGTGA 2 cut(s) 265, 682
Hpy166II GTNNAC 6 cut(s) 131, 228, 263, 307, 316, 627
Hpy188I TCNGA 2 cut(s) 289, 322
Hpy188III TCNNGA 5 cut(s) 466, 484, 606, 656, 677
Hpy8I GTNNAC 6 cut(s) 131, 228, 263, 307, 316, 627
HpyAV CCTTC 1 cut(s) 351
HpyCH4III ACNGT 5 cut(s) 17, 79, 103, 298, 364
HpyCH4V TGCA 2 cut(s) 85, 569
HpyF10VI GCNNNNNNNGC 2 cut(s) 282, 291
HpyF3I CTNAG 1 cut(s) 355
Hsp92II CATG 4 cut(s) 62, 151, 375, 508
KpnI GGTACC 1 cut(s) 363
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 3 cut(s) 255, 486, 679
LmnI GCTCC 1 cut(s) 290
LpnPI CCDG 7 cut(s) 8, 295, 372, 469, 574, 636, 679
Lsp1109I GCAGC 3 cut(s) 41, 245, 285
LweI GCATC 1 cut(s) 221
MabI ACCWGGT 1 cut(s) 692
MaeI CTAG 1 cut(s) 703
MalI GATC 3 cut(s) 257, 488, 681
MbiI CCGCTC 1 cut(s) 632
MboI GATC 3 cut(s) 255, 486, 679
MboII GAAGA 3 cut(s) 133, 178, 481
MfeI CAATTG 2 cut(s) 531, 587
MflI RGATCY 1 cut(s) 486
MhlI GDGCHC 1 cut(s) 442
MluCI AATT 4 cut(s) 237, 531, 587, 646
MlyI GAGTC 1 cut(s) 632
MmeI TCCRAC 1 cut(s) 345
MnlI CCTC 8 cut(s) 122, 343, 416, 473, 483, 568, 592, 693
MspA1I CMGCKG 2 cut(s) 32, 614
MspI CCGG 1 cut(s) 699
MspR9I CCNGG 1 cut(s) 694
MunI CAATTG 2 cut(s) 531, 587
Mva1269I GAATGC 1 cut(s) 455
MvaI CCWGG 1 cut(s) 694
MwoI GCNNNNNNNGC 2 cut(s) 282, 291
NdeII GATC 3 cut(s) 255, 486, 679
NlaIII CATG 4 cut(s) 62, 151, 375, 508
NlaIV GGNNCC 2 cut(s) 361, 440
PctI GAATGC 1 cut(s) 455
PfeI GAWTC 4 cut(s) 278, 418, 469, 602
PkrI GCNGC 4 cut(s) 31, 235, 275, 409
PleI GAGTC 1 cut(s) 631
PpsI GAGTC 1 cut(s) 631
Psp6I CCWGG 1 cut(s) 692
PspGI CCWGG 1 cut(s) 692
PspN4I GGNNCC 2 cut(s) 361, 440
PspOMI GGGCCC 1 cut(s) 438
PspPI GGNCC 4 cut(s) 438, 439, 494, 696
PsuI RGATCY 1 cut(s) 486
RsaI GTAC 4 cut(s) 186, 264, 306, 361
RsaNI GTAC 4 cut(s) 185, 263, 305, 360
SalI GTCGAC 1 cut(s) 625
SatI GCNGC 4 cut(s) 30, 234, 274, 408
Sau3AI GATC 3 cut(s) 255, 486, 679
Sau96I GGNCC 4 cut(s) 438, 439, 494, 696
SchI GAGTC 1 cut(s) 632
ScrFI CCNGG 1 cut(s) 694
SduI GDGCHC 1 cut(s) 442
SetI ASST 9 cut(s) 11, 287, 343, 361, 391, 465, 560, 566, 698
SexAI ACCWGGT 1 cut(s) 692
SfaNI GCATC 1 cut(s) 221
SinI GGWCC 1 cut(s) 696
Sse9I AATT 4 cut(s) 237, 531, 587, 646
SsiI CCGC 4 cut(s) 32, 407, 612, 630
SspMI CTAG 1 cut(s) 703
StyD4I CCNGG 1 cut(s) 692
StyI CCWWGG 1 cut(s) 442
TaaI ACNGT 5 cut(s) 17, 79, 103, 298, 364
TaqI TCGA 4 cut(s) 215, 421, 467, 626
TasI AATT 4 cut(s) 237, 531, 587, 646
TatI WGTACW 3 cut(s) 184, 262, 304
TauI GCSGC 1 cut(s) 410
TfiI GAWTC 4 cut(s) 278, 418, 469, 602
TscAI CASTG 3 cut(s) 22, 265, 301
TseI GCWGC 3 cut(s) 29, 233, 273
TspDTI ATGAA 3 cut(s) 61, 382, 569
TspRI CASTG 3 cut(s) 22, 265, 301
VpaK11BI GGWCC 1 cut(s) 696
XmiI GTMKAC 1 cut(s) 626
XspI CTAG 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.