RLG00000027175

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
9300976 .. 9302166
1191 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027175

Sequence Viewer

Length: 858 bp
ATGGAGCAGAGGAAAGGCCGGAGGTTGATACTCTTCCCATTTCCCTTGCAAGGCCATATAAACCCTATGCTTGAGCTGGCCAACATTCTACACTTCAAATGCTTCTCCATAACAATCATCCACACAAACTTAAACTCTCTCAACCCTTCAACCCATCCACAGTTCACCTTCCACTCAATCTCAGATGACTTATCTGAAAGCGAGGCTGCTGAAGAGGATCTTCTCCTTCTTCTTTCTCATCTCAACTCTGTTGCTAAGAGCCTTAAGCTCCCATGGATTCTGTTAAGGACCAGTGGTGCTTCTTCCACCGCTGTCTATTTTGCATTTCCACTCCTACGGGAAAAGGGTTACATTCCAAAGCAAGACTCTCGACTGGAAGAGACAGTGACAGAGCTTTCACCTGTCAAAGTTAAAGATCTTCCGATGATCCCCAACCTTGAACTAGATGCACTCTCCACAATTCGCAAGAAATTTCACATTCCAGTCTTCCCAATAGGTCCATTTCACAAGTGTGTCCCAGCAACAACTTCTGCAAATAGCTTATTATCACAAGACCGGAGCTGCATTTCATGGCTAAACAGTCAAGCACCAAAATCTGTTATCTATGTTAGTTTCGGGAGCATTGCTGCAATAAACGAAGCTCAGTTTTTGGAGATAGCCTGGGGACTAGCCAACAGCAAGCAATCATTTTTGTGGGTGGTTCGACTCGGGTTAGTTCAAGGTTCAGAATGGCTAGAACCACTGCCTAGTGGTTTTCCTGAGAGCTTGAATGGAATGGGACACATTGTGAAATGGGCACCCCAAAAAGAGGTGCTTGCCCATGAAGCTGTTGGAGTATTTTGGACTCACACTGGTTAG

Protein Analysis

286

Amino Acids

31.78

Weight (kDa)

6.83

Isoelectric Point (pI)

50.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 190 - 285 6.8e-11 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 796
AciI CCGC 1 cut(s) 309
AclWI GGATC 2 cut(s) 225, 421
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 1 cut(s) 470
AcuI CTGAAG 1 cut(s) 231
AdeI CACNNNGTG 1 cut(s) 787
AfiI CCNNNNNNNGG 2 cut(s) 50, 808
AflII CTTAAG 1 cut(s) 263
AgsI TTSAA 5 cut(s) 97, 150, 440, 719, 769
AjnI CCWGG 1 cut(s) 659
AleI CACNNNNGTG 1 cut(s) 510
AluBI AGCT 8 cut(s) 76, 268, 394, 540, 561, 641, 765, 827
AluI AGCT 8 cut(s) 76, 268, 394, 540, 561, 641, 765, 827
Alw26I GTCTC 1 cut(s) 374
AlwI GGATC 2 cut(s) 225, 421
Ama87I CYCGRG 1 cut(s) 707
AoxI GGCC 3 cut(s) 16, 52, 78
ApeKI GCWGC 3 cut(s) 206, 561, 626
ApoI RAATTY 1 cut(s) 470
AspS9I GGNCC 2 cut(s) 288, 497
AsuHPI GGTGA 2 cut(s) 157, 390
AvaI CYCGRG 1 cut(s) 707
AvaII GGWCC 2 cut(s) 288, 497
BaeGI GKGCMC 1 cut(s) 799
BalI TGGCCA 1 cut(s) 80
BanI GGYRCC 1 cut(s) 796
BbsI GAAGAC 1 cut(s) 478
BbvI GCAGC 3 cut(s) 193, 548, 613
BccI CCATC 1 cut(s) 162
BcgI CGANNNNNNTGC 2 cut(s) 350, 384
BciT130I CCWGG 1 cut(s) 661
BcoDI GTCTC 1 cut(s) 374
BfaI CTAG 4 cut(s) 443, 668, 734, 747
BfrI CTTAAG 1 cut(s) 263
BglII AGATCT 1 cut(s) 415
BisI GCNGC 3 cut(s) 207, 562, 627
BlsI GCNGC 3 cut(s) 208, 563, 628
Bme1390I CCNGG 1 cut(s) 661
Bme18I GGWCC 2 cut(s) 288, 497
BmeT110I CYCGRG 1 cut(s) 707
BmgT120I GGNCC 2 cut(s) 288, 497
BmiI GGNNCC 1 cut(s) 798
BmrFI CCNGG 1 cut(s) 661
BmsI GCATC 1 cut(s) 436
BpiI GAAGAC 1 cut(s) 478
BpuEI CTTGAG 1 cut(s) 92
BsaJI CCNNGG 2 cut(s) 272, 660
BsaWI WCCGGW 1 cut(s) 555
Bsc4I CCNNNNNNNGG 2 cut(s) 50, 808
Bse1I ACTGG 4 cut(s) 291, 378, 482, 856
Bse3DI GCAATG 1 cut(s) 621
BseBI CCWGG 1 cut(s) 661
BseDI CCNNGG 2 cut(s) 272, 660
BseGI GGATG 2 cut(s) 117, 154
BseLI CCNNNNNNNGG 2 cut(s) 50, 808
BseMI GCAATG 1 cut(s) 621
BseMII CTCAG 3 cut(s) 195, 656, 750
BseNI ACTGG 4 cut(s) 291, 378, 482, 856
BseSI GKGCMC 1 cut(s) 799
BseXI GCAGC 3 cut(s) 193, 548, 613
BseYI CCCAGC 1 cut(s) 517
BshFI GGCC 3 cut(s) 18, 54, 80
BshNI GGYRCC 1 cut(s) 796
BsiHKCI CYCGRG 1 cut(s) 707
BsiSI CCGG 2 cut(s) 19, 556
BslFI GGGAC 3 cut(s) 500, 678, 792
BslI CCNNNNNNNGG 2 cut(s) 50, 808
BsmAI GTCTC 1 cut(s) 374
BsmFI GGGAC 3 cut(s) 500, 678, 792
BsnI GGCC 3 cut(s) 18, 54, 80
BsoBI CYCGRG 1 cut(s) 707
Bsp1286I GDGCHC 1 cut(s) 799
Bsp143I GATC 3 cut(s) 217, 415, 426
Bsp19I CCATGG 1 cut(s) 272
BspACI CCGC 1 cut(s) 309
BspANI GGCC 3 cut(s) 18, 54, 80
BspCNI CTCAG 3 cut(s) 194, 655, 751
BspLI GGNNCC 1 cut(s) 798
BspPI GGATC 2 cut(s) 225, 421
BspT107I GGYRCC 1 cut(s) 796
BspTI CTTAAG 1 cut(s) 263
BsrDI GCAATG 1 cut(s) 621
BsrI ACTGG 4 cut(s) 291, 378, 482, 856
BssECI CCNNGG 2 cut(s) 272, 660
BssMI GATC 3 cut(s) 217, 415, 426
BssT1I CCWWGG 1 cut(s) 272
Bst2UI CCWGG 1 cut(s) 661
Bst4CI ACNGT 3 cut(s) 162, 385, 581
Bst6I CTCTTC 3 cut(s) 38, 207, 372
BstAFI CTTAAG 1 cut(s) 263
BstC8I GCNNGC 3 cut(s) 78, 680, 816
BstDEI CTNAG 4 cut(s) 181, 255, 642, 759
BstDSI CCRYGG 1 cut(s) 272
BstF5I GGATG 2 cut(s) 117, 154
BstKTI GATC 3 cut(s) 220, 418, 429
BstMAI GTCTC 1 cut(s) 374
BstMBI GATC 3 cut(s) 217, 415, 426
BstMWI GCNNNNNNNGC 1 cut(s) 824
BstNI CCWGG 1 cut(s) 661
BstSCI CCNGG 1 cut(s) 659
BstSLI GKGCMC 1 cut(s) 799
BstV1I GCAGC 3 cut(s) 193, 548, 613
BstV2I GAAGAC 1 cut(s) 478
BstX2I RGATCY 2 cut(s) 217, 415
BstYI RGATCY 2 cut(s) 217, 415
BsuRI GGCC 3 cut(s) 18, 54, 80
BtgI CCRYGG 1 cut(s) 272
BtsCI GGATG 2 cut(s) 117, 154
BtsI GCAGTG 1 cut(s) 740
BtsIMutI CAGTG 4 cut(s) 298, 390, 740, 849
Cac8I GCNNGC 3 cut(s) 78, 680, 816
Cfr13I GGNCC 2 cut(s) 288, 497
CviAII CATG 3 cut(s) 273, 570, 821
DdeI CTNAG 4 cut(s) 181, 255, 642, 759
DpnI GATC 3 cut(s) 219, 417, 428
DpnII GATC 3 cut(s) 217, 415, 426
DraIII CACNNNGTG 1 cut(s) 787
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 3 cut(s) 38, 207, 372
EarI CTCTTC 3 cut(s) 38, 207, 372
Eco130I CCWWGG 1 cut(s) 272
Eco47I GGWCC 2 cut(s) 288, 497
Eco57I CTGAAG 1 cut(s) 231
Eco88I CYCGRG 1 cut(s) 707
EcoRII CCWGG 1 cut(s) 659
EcoT14I CCWWGG 1 cut(s) 272
ErhI CCWWGG 1 cut(s) 272
FaeI CATG 3 cut(s) 276, 573, 824
FaiI YATR 8 cut(s) 57, 59, 68, 110, 274, 571, 606, 822
FalI AAGNNNNNCTT 4 cut(s) 204, 236, 798, 830
FaqI GGGAC 3 cut(s) 500, 678, 792
FatI CATG 3 cut(s) 272, 569, 820
Fnu4HI GCNGC 3 cut(s) 207, 562, 627
FokI GGATG 2 cut(s) 104, 141
Fsp4HI GCNGC 3 cut(s) 207, 562, 627
FspBI CTAG 4 cut(s) 443, 668, 734, 747
GluI GCNGC 3 cut(s) 207, 562, 627
GsaI CCCAGC 1 cut(s) 521
HaeIII GGCC 3 cut(s) 18, 54, 80
HapII CCGG 2 cut(s) 19, 556
Hin1II CATG 3 cut(s) 276, 573, 824
HinfI GANTC 4 cut(s) 277, 365, 705, 844
HpaII CCGG 2 cut(s) 19, 556
HphI GGTGA 2 cut(s) 157, 390
Hpy166II GTNNAC 1 cut(s) 165
Hpy188I TCNGA 4 cut(s) 184, 196, 423, 727
Hpy188III TCNNGA 3 cut(s) 369, 616, 758
Hpy8I GTNNAC 1 cut(s) 165
HpyAV CCTTC 3 cut(s) 156, 178, 236
HpyCH4III ACNGT 3 cut(s) 162, 385, 581
HpyCH4V TGCA 6 cut(s) 49, 323, 449, 533, 564, 629
HpyF10VI GCNNNNNNNGC 1 cut(s) 824
HpyF3I CTNAG 4 cut(s) 181, 255, 642, 759
Hsp92II CATG 3 cut(s) 276, 573, 824
Kzo9I GATC 3 cut(s) 217, 415, 426
LmnI GCTCC 4 cut(s) 4, 273, 558, 618
Lsp1109I GCAGC 3 cut(s) 193, 548, 613
LweI GCATC 1 cut(s) 436
MaeI CTAG 4 cut(s) 443, 668, 734, 747
MaeIII GTNAC 2 cut(s) 347, 385
MalI GATC 3 cut(s) 219, 417, 428
MboI GATC 3 cut(s) 217, 415, 426
MboII GAAGA 8 cut(s) 25, 212, 221, 224, 294, 389, 410, 478
MflI RGATCY 2 cut(s) 217, 415
MhlI GDGCHC 1 cut(s) 799
MlsI TGGCCA 1 cut(s) 80
MluCI AATT 2 cut(s) 459, 470
MluNI TGGCCA 1 cut(s) 80
MlyI GAGTC 3 cut(s) 359, 699, 838
MmeI TCCRAC 1 cut(s) 811
MnlI CCTC 5 cut(s) 3, 15, 196, 208, 802
Mox20I TGGCCA 1 cut(s) 80
MscI TGGCCA 1 cut(s) 80
MseI TTAA 4 cut(s) 131, 264, 284, 411
MslI CAYNNNNRTG 2 cut(s) 510, 691
Msp20I TGGCCA 1 cut(s) 80
MspA1I CMGCKG 1 cut(s) 311
MspCI CTTAAG 1 cut(s) 263
MspI CCGG 2 cut(s) 19, 556
MspR9I CCNGG 1 cut(s) 661
MvaI CCWGG 1 cut(s) 661
MwoI GCNNNNNNNGC 1 cut(s) 824
NcoI CCATGG 1 cut(s) 272
NdeII GATC 3 cut(s) 217, 415, 426
NlaIII CATG 3 cut(s) 276, 573, 824
NlaIV GGNNCC 1 cut(s) 798
NmuCI GTSAC 1 cut(s) 385
OliI CACNNNNGTG 1 cut(s) 510
PfeI GAWTC 1 cut(s) 277
PkrI GCNGC 3 cut(s) 208, 563, 628
PleI GAGTC 3 cut(s) 359, 699, 838
PpsI GAGTC 3 cut(s) 359, 699, 838
Psp6I CCWGG 1 cut(s) 659
PspFI CCCAGC 1 cut(s) 517
PspGI CCWGG 1 cut(s) 659
PspN4I GGNNCC 1 cut(s) 798
PspPI GGNCC 2 cut(s) 288, 497
PsuI RGATCY 2 cut(s) 217, 415
RseI CAYNNNNRTG 2 cut(s) 510, 691
SaqAI TTAA 4 cut(s) 131, 264, 284, 411
SatI GCNGC 3 cut(s) 207, 562, 627
Sau3AI GATC 3 cut(s) 217, 415, 426
Sau96I GGNCC 2 cut(s) 288, 497
SchI GAGTC 3 cut(s) 359, 699, 838
ScrFI CCNGG 1 cut(s) 661
SduI GDGCHC 1 cut(s) 799
SfaNI GCATC 1 cut(s) 436
SinI GGWCC 2 cut(s) 288, 497
SmiMI CAYNNNNRTG 2 cut(s) 510, 691
SmlI CTYRAG 2 cut(s) 71, 263
SmoI CTYRAG 2 cut(s) 71, 263
Sse9I AATT 2 cut(s) 459, 470
SsiI CCGC 1 cut(s) 309
SspMI CTAG 4 cut(s) 443, 668, 734, 747
StyD4I CCNGG 1 cut(s) 659
StyI CCWWGG 1 cut(s) 272
TaaI ACNGT 3 cut(s) 162, 385, 581
TaqI TCGA 2 cut(s) 370, 703
TasI AATT 2 cut(s) 459, 470
TfiI GAWTC 1 cut(s) 277
Tru1I TTAA 4 cut(s) 131, 264, 284, 411
Tru9I TTAA 4 cut(s) 131, 264, 284, 411
TscAI CASTG 4 cut(s) 298, 390, 747, 856
TseFI GTSAC 1 cut(s) 385
TseI GCWGC 3 cut(s) 206, 561, 626
Tsp45I GTSAC 1 cut(s) 385
TspDTI ATGAA 2 cut(s) 558, 837
TspRI CASTG 4 cut(s) 298, 390, 747, 856
Vha464I CTTAAG 1 cut(s) 263
VpaK11BI GGWCC 2 cut(s) 288, 497
XapI RAATTY 1 cut(s) 470
XcmI CCANNNNNNNNNTGG 1 cut(s) 827
XspI CTAG 4 cut(s) 443, 668, 734, 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.