Rh5BG423900

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
68517671 .. 68518042
372 bp
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UTR
Exon/CDS
Intron
Rh5BG423900.1

Sequence Viewer

Length: 372 bp
ATGGAGGATATTAAGAAGGGTCGGAGGTTGATCCTCTTGCCACTTCCACTTCAAGGCCACATAAACCCCATGCTACAGCTAGTCAACATTCTACATTCCAAAGGCTTTTCCATAACCATCATCCACACCCAGTTCAATTCCTTAAACCCTTCAACCCATCCACACTCCACCTTTCACTCGATCCCAGACAGGGTATCTGAAGCTGAGGTCACCACAAAAGATATTCTCCTTCTTTTCTGTCTTCTCAATACTAGGTACATTGAGCCTTTCCGCAAATGCTTGGCTAGGATATTGTTATCTGATGATGTTGGGGATGAGCCTGTTGCTTGCTTGATCTCCGACAGTCTTTCACTTCACTCAATTTGTTGCTGA

Protein Analysis

123

Amino Acids

13.84

Weight (kDa)

6.63

Isoelectric Point (pI)

53.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 271
AclWI GGATC 2 cut(s) 25, 175
AcuI CTGAAG 1 cut(s) 219
AfaI GTAC 1 cut(s) 257
AfiI CCNNNNNNNGG 2 cut(s) 53, 190
AgsI TTSAA 3 cut(s) 53, 136, 153
AluBI AGCT 2 cut(s) 79, 203
AluI AGCT 2 cut(s) 79, 203
AlwI GGATC 2 cut(s) 25, 175
AoxI GGCC 1 cut(s) 55
AsuHPI GGTGA 1 cut(s) 202
BbsI GAAGAC 1 cut(s) 233
BbvCI CCTCAGC 1 cut(s) 204
BccI CCATC 2 cut(s) 125, 165
BfaI CTAG 3 cut(s) 80, 252, 285
BfmI CTRYAG 1 cut(s) 74
BmrI ACTGGG 1 cut(s) 124
BmuI ACTGGG 1 cut(s) 124
BpiI GAAGAC 1 cut(s) 233
Bpu10I CCTNAGC 1 cut(s) 204
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 190
Bse1I ACTGG 1 cut(s) 130
BseGI GGATG 3 cut(s) 120, 157, 319
BseLI CCNNNNNNNGG 2 cut(s) 53, 190
BseMII CTCAG 1 cut(s) 195
BseNI ACTGG 1 cut(s) 130
BshFI GGCC 1 cut(s) 57
BslI CCNNNNNNNGG 2 cut(s) 53, 190
BsnI GGCC 1 cut(s) 57
Bsp143I GATC 3 cut(s) 30, 180, 333
BspACI CCGC 1 cut(s) 271
BspANI GGCC 1 cut(s) 57
BspCNI CTCAG 1 cut(s) 196
BspPI GGATC 2 cut(s) 25, 175
BsrI ACTGG 1 cut(s) 130
BssMI GATC 3 cut(s) 30, 180, 333
Bst4CI ACNGT 1 cut(s) 344
BstC8I GCNNGC 1 cut(s) 328
BstDEI CTNAG 1 cut(s) 204
BstEII GGTNACC 1 cut(s) 208
BstF5I GGATG 3 cut(s) 120, 157, 319
BstKTI GATC 3 cut(s) 33, 183, 336
BstMBI GATC 3 cut(s) 30, 180, 333
BstPI GGTNACC 1 cut(s) 208
BstSFI CTRYAG 1 cut(s) 74
BstV2I GAAGAC 1 cut(s) 233
BsuRI GGCC 1 cut(s) 57
BtsCI GGATG 3 cut(s) 120, 157, 319
Cac8I GCNNGC 1 cut(s) 328
Csp6I GTAC 1 cut(s) 256
CviAII CATG 1 cut(s) 70
CviJI RGCY 7 cut(s) 57, 79, 105, 203, 265, 284, 319
CviKI_1 RGCY 7 cut(s) 57, 79, 105, 203, 265, 284, 319
CviQI GTAC 1 cut(s) 256
DdeI CTNAG 1 cut(s) 204
DpnI GATC 3 cut(s) 32, 182, 335
DpnII GATC 3 cut(s) 30, 180, 333
Eco57I CTGAAG 1 cut(s) 219
Eco91I GGTNACC 1 cut(s) 208
EcoO65I GGTNACC 1 cut(s) 208
FaeI CATG 1 cut(s) 73
FaiI YATR 3 cut(s) 62, 71, 113
FatI CATG 1 cut(s) 69
FokI GGATG 3 cut(s) 107, 144, 326
FspBI CTAG 3 cut(s) 80, 252, 285
HaeIII GGCC 1 cut(s) 57
Hin1II CATG 1 cut(s) 73
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HphI GGTGA 1 cut(s) 202
Hpy166II GTNNAC 1 cut(s) 85
Hpy188I TCNGA 4 cut(s) 24, 199, 301, 340
Hpy8I GTNNAC 1 cut(s) 85
HpyAV CCTTC 3 cut(s) 10, 159, 239
HpyCH4III ACNGT 1 cut(s) 344
HpyF3I CTNAG 1 cut(s) 204
Hsp92II CATG 1 cut(s) 73
Kzo9I GATC 3 cut(s) 30, 180, 333
LpnPI CCDG 4 cut(s) 143, 175, 198, 333
MaeI CTAG 3 cut(s) 80, 252, 285
MaeIII GTNAC 1 cut(s) 208
MalI GATC 3 cut(s) 32, 182, 335
MboI GATC 3 cut(s) 30, 180, 333
MboII GAAGA 1 cut(s) 233
MluCI AATT 2 cut(s) 136, 360
MmeI TCCRAC 1 cut(s) 363
MnlI CCTC 3 cut(s) 18, 44, 199
MseI TTAA 2 cut(s) 12, 143
NdeII GATC 3 cut(s) 30, 180, 333
NlaIII CATG 1 cut(s) 73
NmuCI GTSAC 1 cut(s) 208
PspEI GGTNACC 1 cut(s) 208
RsaI GTAC 1 cut(s) 257
RsaNI GTAC 1 cut(s) 256
SaqAI TTAA 2 cut(s) 12, 143
Sau3AI GATC 3 cut(s) 30, 180, 333
SetI ASST 6 cut(s) 29, 81, 173, 205, 210, 257
SfcI CTRYAG 1 cut(s) 74
Sse9I AATT 2 cut(s) 136, 360
SsiI CCGC 1 cut(s) 271
SspMI CTAG 3 cut(s) 80, 252, 285
TaaI ACNGT 1 cut(s) 344
TaqI TCGA 1 cut(s) 179
TasI AATT 2 cut(s) 136, 360
Tru1I TTAA 2 cut(s) 12, 143
Tru9I TTAA 2 cut(s) 12, 143
TseFI GTSAC 1 cut(s) 208
Tsp45I GTSAC 1 cut(s) 208
XspI CTAG 3 cut(s) 80, 252, 285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.