pycom01g16360

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
15959958 .. 15960499
542 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g16360.1

Sequence Viewer

Length: 501 bp
ATGGCTAAACACTCAAGCGCCAAAATATGTTGCTTATGTAGCTTTGGGAGCAATGCCAAGATAGATCAAGCTCACTTTTTGGAGATTCCTTGGGGCTTGGCCAACAGTGGCCAACCTTTTTTGTGGGACACTCGACCCAGATTAGGTCAAGAGGTAGAAGTGTTGCCTAACGGATTTCTAGAAGCGTTGAATGAGAGGGATCATGTTGTAAATGGGCTTCACAAAAAGAAGTGTTGGAATTCTACATTAGAGAGCATTTGTGAAGAGGTCCCTATGATTTGTACGTCATTTTTAAGTGGTCAAATGGTGGATACAAGATTTATAAGTAATGTTTGGAAGGTAGGGCTATTGGTGCATGGGATTGAGAGAGGCGAGGTTGAAAGAACAATTAGAAGATTGATGGTTGAGAAAGAAGGGGAAGAGATCAAAGAGAGAGCCTTAAAGTTGACGGAACAGGCAAATCTTTGCCTCAAAGAAGGTGGCTCTTCGTCCAATCTTTGA

Protein Analysis

167

Amino Acids

18.64

Weight (kDa)

6.22

Isoelectric Point (pI)

32.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 323
AclWI GGATC 1 cut(s) 207
AcoI YGGCCR 2 cut(s) 99, 109
AcsI RAATTY 1 cut(s) 238
AfaI GTAC 1 cut(s) 283
AfiI CCNNNNNNNGG 1 cut(s) 143
AgsI TTSAA 2 cut(s) 190, 380
AluBI AGCT 2 cut(s) 42, 71
AluI AGCT 2 cut(s) 42, 71
AlwI GGATC 1 cut(s) 207
AoxI GGCC 2 cut(s) 99, 109
ApoI RAATTY 1 cut(s) 238
AspLEI GCGC 1 cut(s) 20
AspS9I GGNCC 1 cut(s) 268
AvaII GGWCC 1 cut(s) 268
BalI TGGCCA 2 cut(s) 101, 111
BarI GAAGNNNNNNTAC 2 cut(s) 201, 233
BccI CCATC 1 cut(s) 394
BciVI GTATCC 1 cut(s) 304
BfaI CTAG 1 cut(s) 179
BfoI RGCGCY 1 cut(s) 21
BfuI GTATCC 1 cut(s) 304
Bme18I GGWCC 1 cut(s) 268
BmgT120I GGNCC 1 cut(s) 268
BmiI GGNNCC 1 cut(s) 270
BsaJI CCNNGG 1 cut(s) 89
Bsc4I CCNNNNNNNGG 1 cut(s) 143
Bse3DI GCAATG 1 cut(s) 58
BseDI CCNNGG 1 cut(s) 89
BseLI CCNNNNNNNGG 1 cut(s) 143
BseMI GCAATG 1 cut(s) 58
BshFI GGCC 2 cut(s) 101, 111
BslFI GGGAC 2 cut(s) 140, 254
BslI CCNNNNNNNGG 1 cut(s) 143
BsmFI GGGAC 2 cut(s) 140, 254
BsnI GGCC 2 cut(s) 101, 111
Bsp143I GATC 3 cut(s) 64, 199, 423
BspANI GGCC 2 cut(s) 101, 111
BspLI GGNNCC 1 cut(s) 270
BspPI GGATC 1 cut(s) 207
BspQI GCTCTTC 1 cut(s) 490
BsrDI GCAATG 1 cut(s) 58
BssECI CCNNGG 1 cut(s) 89
BssMI GATC 3 cut(s) 64, 199, 423
BssT1I CCWWGG 1 cut(s) 89
Bst4CI ACNGT 1 cut(s) 107
Bst6I CTCTTC 3 cut(s) 258, 414, 490
BstH2I RGCGCY 1 cut(s) 21
BstHHI GCGC 1 cut(s) 20
BstKTI GATC 3 cut(s) 67, 202, 426
BstMBI GATC 3 cut(s) 64, 199, 423
BstMWI GCNNNNNNNGC 3 cut(s) 39, 48, 352
BsuI GTATCC 1 cut(s) 304
BsuRI GGCC 2 cut(s) 101, 111
BtsIMutI CAGTG 1 cut(s) 112
CfoI GCGC 1 cut(s) 20
Cfr13I GGNCC 1 cut(s) 268
Csp6I GTAC 1 cut(s) 282
CspCI CAANNNNNGTGG 2 cut(s) 460, 495
CviAII CATG 2 cut(s) 203, 356
CviQI GTAC 1 cut(s) 282
DpnI GATC 3 cut(s) 66, 201, 425
DpnII GATC 3 cut(s) 64, 199, 423
EaeI YGGCCR 2 cut(s) 99, 109
Eam1104I CTCTTC 3 cut(s) 258, 414, 490
EarI CTCTTC 3 cut(s) 258, 414, 490
Eco130I CCWWGG 1 cut(s) 89
Eco47I GGWCC 1 cut(s) 268
EcoO109I RGGNCCY 1 cut(s) 268
EcoRI GAATTC 1 cut(s) 238
EcoT14I CCWWGG 1 cut(s) 89
ErhI CCWWGG 1 cut(s) 89
FaeI CATG 2 cut(s) 206, 359
FaiI YATR 6 cut(s) 28, 37, 204, 275, 323, 357
FaqI GGGAC 2 cut(s) 140, 254
FatI CATG 2 cut(s) 202, 355
FspBI CTAG 1 cut(s) 179
GlaI GCGC 1 cut(s) 19
HaeII RGCGCY 1 cut(s) 21
HaeIII GGCC 2 cut(s) 101, 111
HhaI GCGC 1 cut(s) 20
Hin1II CATG 2 cut(s) 206, 359
Hin6I GCGC 1 cut(s) 18
HinP1I GCGC 1 cut(s) 18
HincII GTYRAC 1 cut(s) 447
HindII GTYRAC 1 cut(s) 447
HinfI GANTC 1 cut(s) 85
Hpy166II GTNNAC 1 cut(s) 447
Hpy188III TCNNGA 2 cut(s) 149, 179
Hpy8I GTNNAC 1 cut(s) 447
HpyAV CCTTC 3 cut(s) 331, 407, 470
HpyCH4III ACNGT 1 cut(s) 107
HpyCH4IV ACGT 1 cut(s) 284
HpyCH4V TGCA 1 cut(s) 355
HpyF10VI GCNNNNNNNGC 3 cut(s) 39, 48, 352
HpySE526I ACGT 1 cut(s) 284
Hsp92II CATG 2 cut(s) 206, 359
HspAI GCGC 1 cut(s) 18
Kzo9I GATC 3 cut(s) 64, 199, 423
LguI GCTCTTC 1 cut(s) 490
LmnI GCTCC 1 cut(s) 48
LpnPI CCDG 2 cut(s) 151, 440
MaeI CTAG 1 cut(s) 179
MaeII ACGT 1 cut(s) 284
MalI GATC 3 cut(s) 66, 201, 425
MboI GATC 3 cut(s) 64, 199, 423
MboII GAAGA 4 cut(s) 275, 405, 431, 477
MlsI TGGCCA 2 cut(s) 101, 111
MluCI AATT 2 cut(s) 238, 387
MluNI TGGCCA 2 cut(s) 101, 111
MmeI TCCRAC 1 cut(s) 215
MnlI CCTC 6 cut(s) 145, 189, 259, 362, 367, 479
Mox20I TGGCCA 2 cut(s) 101, 111
MscI TGGCCA 2 cut(s) 101, 111
MseI TTAA 2 cut(s) 293, 440
Msp20I TGGCCA 2 cut(s) 101, 111
MwoI GCNNNNNNNGC 3 cut(s) 39, 48, 352
NdeII GATC 3 cut(s) 64, 199, 423
NlaIII CATG 2 cut(s) 206, 359
NlaIV GGNNCC 1 cut(s) 270
PciSI GCTCTTC 1 cut(s) 490
PfeI GAWTC 1 cut(s) 85
PpuMI RGGWCCY 1 cut(s) 268
PsiI TTATAA 1 cut(s) 323
Psp5II RGGWCCY 1 cut(s) 268
PspN4I GGNNCC 1 cut(s) 270
PspPI GGNCC 1 cut(s) 268
PspPPI RGGWCCY 1 cut(s) 268
RsaI GTAC 1 cut(s) 283
RsaNI GTAC 1 cut(s) 282
SapI GCTCTTC 1 cut(s) 490
SaqAI TTAA 2 cut(s) 293, 440
Sau3AI GATC 3 cut(s) 64, 199, 423
Sau96I GGNCC 1 cut(s) 268
SinI GGWCC 1 cut(s) 268
SmlI CTYRAG 1 cut(s) 13
SmoI CTYRAG 1 cut(s) 13
Sse9I AATT 2 cut(s) 238, 387
SspMI CTAG 1 cut(s) 179
StyI CCWWGG 1 cut(s) 89
TaaI ACNGT 1 cut(s) 107
TaiI ACGT 1 cut(s) 287
TaqI TCGA 1 cut(s) 133
TasI AATT 2 cut(s) 238, 387
TfiI GAWTC 1 cut(s) 85
Tru1I TTAA 2 cut(s) 293, 440
Tru9I TTAA 2 cut(s) 293, 440
TscAI CASTG 1 cut(s) 112
TspGWI ACGGA 2 cut(s) 186, 464
TspRI CASTG 1 cut(s) 112
VpaK11BI GGWCC 1 cut(s) 268
XapI RAATTY 1 cut(s) 238
XbaI TCTAGA 1 cut(s) 178
XspI CTAG 1 cut(s) 179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.