Rorug07G0021100

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
1551062 .. 1555376
4315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0021100.1

Sequence Viewer

Length: 1152 bp
ATGTCGGTCGACGGCCGGGACGGCCCGGCTCAGGCGGCCGGAAACGGACTGGGGAATTCGAACAATTCGGCGGCGGCGTTCGTGACGATGTCGAGCCAGCGGCTGCGTCTGAACCCTAACAAGGAGCACAAGCCGGAGAGCTACGACGACATGCAATTGGATTTCAGCCCGTCGATCTTCAGCTCTCTGGAACGGTACTTGCCGCCGAACATGCTCGGAATGCCGAGATATGATAAGGTCAAGTTCATGAGGGAGATTCTGCTCAAGTATTTGCCTCATGGAGAGCGCAACAGAGTTCAGAAGCATAGGGATTACAGGCAGAAGATCATATTGAATTACCAGCCTTTGCATAAAGAGTTATACCAGCTGGATCCTGCCACCACCTTTGTTCCTGCATTTCTAGAAGCAGTTAATGAGAATACTGAGGAAAGCTTCAAAAGGATATGTTCTGAACCCTCACCTGGAATATATACTTTTGAGATTTTTCAGCCACGGTTCTGTGAATTGTTATTAGCCGAGGTGGAGAATTTTGAAAAATGGGTCGGTGACTCCAAATATAGAATCATGCGACCAAATACAATGAATAGGTATGGTGCTGTTCTTGATGATTTTGGCCTTGAAACCATGCTTGACAAGCTTTTGGAGGGTTTTGTTCGTCCTATAGCTAAAGAGCTGTTTCCTGAGGTTGGTGGATCAACTCTGGATTCTCATCATGGGTTTGTGGTTGAATATGGTAACAATAGGGATCTTGACTTGGGTTTTCATGTTGATGACTCAGAAGTAACTTTGAATGTGTGCTTGGGTAAACAATTTTCTGGAGGAGAGTTGTATTTTCGGGGAATACGTTGTGATAAACATGTAAATAGCGGAAGCCGTCCAGAGGAAGTCTTTGATTATTCTCATACCCCAGGATATGCTGTGCTTCATCGTGGTCGTCACAGGCATGGTGCTAAAGCCACGACATCAGGTCATCGTGTCAATTTACTTCTATGGTGCAGGAGTTCTGTCTTCAGAGAGATGAGGAAGTATCAGAAAGATTTCTCTAACTGGTGTGGGGAATGCTTGCATGAGAAGAAAGAGAGGCAACGGATGTCAATTACAGCTACGAAACAGGAGTTGTTGCTCAGGAAGGATGATGAGTCAACAGCGTGA

Protein Analysis

383

Amino Acids

44.15

Weight (kDa)

6.93

Isoelectric Point (pI)

38.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OGFOD2-like PF25238 109 - 231 4.2e-52 OGFOD2-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 9
AciI CCGC 6 cut(s) 35, 71, 74, 100, 203, 867
AclWI GGATC 4 cut(s) 365, 378, 700, 753
AcoI YGGCCR 2 cut(s) 13, 36
AcsI RAATTY 2 cut(s) 55, 526
AcuI CTGAAG 2 cut(s) 163, 994
AfaI GTAC 1 cut(s) 197
AfiI CCNNNNNNNGG 5 cut(s) 31, 121, 461, 686, 880
AflIII ACRYGT 1 cut(s) 856
AgsI TTSAA 6 cut(s) 334, 436, 533, 620, 728, 790
AhdI GACNNNNNGTC 1 cut(s) 966
AjnI CCWGG 2 cut(s) 460, 907
AjuI GAANNNNNNNTTGG 2 cut(s) 782, 814
AluBI AGCT 8 cut(s) 141, 183, 367, 432, 637, 665, 673, 1103
AluI AGCT 8 cut(s) 141, 183, 367, 432, 637, 665, 673, 1103
Alw21I GWGCWC 1 cut(s) 129
AlwI GGATC 4 cut(s) 365, 378, 700, 753
AlwNI CAGNNNCTG 1 cut(s) 103
AoxI GGCC 4 cut(s) 13, 22, 36, 613
ApeKI GCWGC 1 cut(s) 103
ApoI RAATTY 2 cut(s) 55, 526
Asp700I GAANNNNTTC 1 cut(s) 1037
AspLEI GCGC 1 cut(s) 288
AspS9I GGNCC 1 cut(s) 23
AsuC2I CCSGG 2 cut(s) 17, 26
AsuHPI GGTGA 2 cut(s) 450, 557
AsuII TTCGAA 1 cut(s) 59
AxyI CCTNAGG 1 cut(s) 681
BamHI GGATCC 1 cut(s) 370
BbsI GAAGAC 1 cut(s) 1000
Bbv12I GWGCWC 1 cut(s) 129
BbvI GCAGC 1 cut(s) 90
BceAI ACGGC 3 cut(s) 28, 37, 858
BciT130I CCWGG 2 cut(s) 462, 909
BcnI CCSGG 2 cut(s) 17, 26
BfaI CTAG 1 cut(s) 401
BfmI CTRYAG 1 cut(s) 660
BglI GCCNNNNNGGC 1 cut(s) 21
BisI GCNGC 6 cut(s) 36, 72, 75, 101, 104, 203
BlsI GCNGC 6 cut(s) 37, 73, 76, 102, 105, 204
Bme1390I CCNGG 4 cut(s) 17, 26, 462, 909
BmeRI GACNNNNNGTC 1 cut(s) 966
BmgT120I GGNCC 1 cut(s) 23
BmiI GGNNCC 1 cut(s) 372
BmrFI CCNGG 4 cut(s) 17, 26, 462, 909
BmrI ACTGGG 1 cut(s) 59
BmuI ACTGGG 1 cut(s) 59
BpiI GAAGAC 1 cut(s) 1000
BpmI CTGGAG 1 cut(s) 837
Bpu10I CCTNAGC 2 cut(s) 30, 1124
Bpu14I TTCGAA 1 cut(s) 59
BpuEI CTTGAG 1 cut(s) 248
BpuMI CCSGG 2 cut(s) 17, 26
BsaBI GATNNNNATC 1 cut(s) 708
BsaJI CCNNGG 3 cut(s) 491, 516, 907
Bsc4I CCNNNNNNNGG 5 cut(s) 31, 121, 461, 686, 880
Bse1I ACTGG 2 cut(s) 54, 1052
Bse21I CCTNAGG 1 cut(s) 681
Bse8I GATNNNNATC 1 cut(s) 708
BseBI CCWGG 2 cut(s) 462, 909
BseDI CCNNGG 3 cut(s) 491, 516, 907
BseGI GGATG 2 cut(s) 1095, 1138
BseJI GATNNNNATC 1 cut(s) 708
BseLI CCNNNNNNNGG 5 cut(s) 31, 121, 461, 686, 880
BseMII CTCAG 5 cut(s) 44, 414, 672, 789, 1138
BseNI ACTGG 2 cut(s) 54, 1052
BseRI GAGGAG 1 cut(s) 834
BseX3I CGGCCG 2 cut(s) 13, 36
BseXI GCAGC 1 cut(s) 90
BsgI GTGCAG 1 cut(s) 1015
Bsh1285I CGRYCG 3 cut(s) 9, 16, 39
BshFI GGCC 4 cut(s) 15, 24, 38, 615
BsiEI CGRYCG 3 cut(s) 9, 16, 39
BsiHKAI GWGCWC 1 cut(s) 129
BsiSI CCGG 4 cut(s) 16, 26, 39, 134
BslFI GGGAC 1 cut(s) 32
BslI CCNNNNNNNGG 5 cut(s) 31, 121, 461, 686, 880
BsmFI GGGAC 1 cut(s) 32
BsmI GAATGC 2 cut(s) 225, 1064
BsnI GGCC 4 cut(s) 15, 24, 38, 615
Bsp119I TTCGAA 1 cut(s) 59
Bsp1286I GDGCHC 1 cut(s) 129
Bsp143I GATC 5 cut(s) 174, 324, 370, 692, 745
BspACI CCGC 6 cut(s) 35, 71, 74, 100, 203, 867
BspANI GGCC 4 cut(s) 15, 24, 38, 615
BspCNI CTCAG 5 cut(s) 43, 415, 673, 788, 1137
BspHI TCATGA 1 cut(s) 246
BspLI GGNNCC 1 cut(s) 372
BspPI GGATC 4 cut(s) 365, 378, 700, 753
BspT104I TTCGAA 1 cut(s) 59
BsrI ACTGG 2 cut(s) 54, 1052
BssECI CCNNGG 3 cut(s) 491, 516, 907
BssMI GATC 5 cut(s) 174, 324, 370, 692, 745
Bst2UI CCWGG 2 cut(s) 462, 909
Bst4CI ACNGT 2 cut(s) 195, 495
BstBI TTCGAA 1 cut(s) 59
BstC8I GCNNGC 2 cut(s) 98, 1064
BstDEI CTNAG 5 cut(s) 30, 423, 681, 775, 1124
BstDSI CCRYGG 1 cut(s) 491
BstF5I GGATG 2 cut(s) 1095, 1138
BstHHI GCGC 1 cut(s) 288
BstKTI GATC 5 cut(s) 177, 327, 373, 695, 748
BstMBI GATC 5 cut(s) 174, 324, 370, 692, 745
BstMCI CGRYCG 3 cut(s) 9, 16, 39
BstMWI GCNNNNNNNGC 5 cut(s) 21, 35, 211, 220, 634
BstNI CCWGG 2 cut(s) 462, 909
BstNSI RCATGY 3 cut(s) 154, 214, 860
BstSCI CCNGG 4 cut(s) 15, 24, 460, 907
BstSFI CTRYAG 1 cut(s) 660
BstV1I GCAGC 1 cut(s) 90
BstV2I GAAGAC 1 cut(s) 1000
BstX2I RGATCY 2 cut(s) 370, 745
BstYI RGATCY 2 cut(s) 370, 745
BstZI CGGCCG 2 cut(s) 13, 36
Bsu36I CCTNAGG 1 cut(s) 681
BsuRI GGCC 4 cut(s) 15, 24, 38, 615
BtgI CCRYGG 1 cut(s) 491
BtsCI GGATG 2 cut(s) 1095, 1138
Cac8I GCNNGC 2 cut(s) 98, 1064
CaiI CAGNNNCTG 1 cut(s) 103
CciI TCATGA 1 cut(s) 246
CfoI GCGC 1 cut(s) 288
Cfr13I GGNCC 1 cut(s) 23
CseI GACGC 1 cut(s) 95
Csp6I GTAC 1 cut(s) 196
CspCI CAANNNNNGTGG 2 cut(s) 367, 402
CviQI GTAC 1 cut(s) 196
DdeI CTNAG 5 cut(s) 30, 423, 681, 775, 1124
DpnI GATC 5 cut(s) 176, 326, 372, 694, 747
DpnII GATC 5 cut(s) 174, 324, 370, 692, 745
DriI GACNNNNNGTC 1 cut(s) 966
EaeI YGGCCR 2 cut(s) 13, 36
EagI CGGCCG 2 cut(s) 13, 36
Eam1105I GACNNNNNGTC 1 cut(s) 966
EclXI CGGCCG 2 cut(s) 13, 36
Eco52I CGGCCG 2 cut(s) 13, 36
Eco57I CTGAAG 2 cut(s) 163, 994
Eco81I CCTNAGG 1 cut(s) 681
EcoRI GAATTC 1 cut(s) 55
EcoRII CCWGG 2 cut(s) 460, 907
FaqI GGGAC 1 cut(s) 32
FblI GTMKAC 1 cut(s) 9
Fnu4HI GCNGC 6 cut(s) 36, 72, 75, 101, 104, 203
FokI GGATG 2 cut(s) 1102, 1145
Fsp4HI GCNGC 6 cut(s) 36, 72, 75, 101, 104, 203
FspBI CTAG 1 cut(s) 401
GlaI GCGC 1 cut(s) 287
GluI GCNGC 6 cut(s) 36, 72, 75, 101, 104, 203
GsuI CTGGAG 1 cut(s) 837
HaeIII GGCC 4 cut(s) 15, 24, 38, 615
HapII CCGG 4 cut(s) 16, 26, 39, 134
HgaI GACGC 1 cut(s) 95
HhaI GCGC 1 cut(s) 288
Hin6I GCGC 1 cut(s) 286
HinP1I GCGC 1 cut(s) 286
HincII GTYRAC 2 cut(s) 10, 1143
HindII GTYRAC 2 cut(s) 10, 1143
HindIII AAGCTT 2 cut(s) 430, 635
HinfI GANTC 6 cut(s) 256, 548, 561, 704, 773, 1139
HpaII CCGG 4 cut(s) 16, 26, 39, 134
HphI GGTGA 2 cut(s) 450, 557
Hpy166II GTNNAC 3 cut(s) 10, 806, 1143
Hpy188I TCNGA 7 cut(s) 111, 218, 300, 451, 778, 1013, 1032
Hpy8I GTNNAC 3 cut(s) 10, 806, 1143
Hpy99I CGWCG 3 cut(s) 14, 149, 175
HpyAV CCTTC 1 cut(s) 1123
HpyCH4III ACNGT 2 cut(s) 195, 495
HpyCH4IV ACGT 1 cut(s) 844
HpyCH4V TGCA 5 cut(s) 154, 349, 395, 996, 1066
HpyF10VI GCNNNNNNNGC 5 cut(s) 21, 35, 211, 220, 634
HpyF3I CTNAG 5 cut(s) 30, 423, 681, 775, 1124
HpySE526I ACGT 1 cut(s) 844
HspAI GCGC 1 cut(s) 286
Kzo9I GATC 5 cut(s) 174, 324, 370, 692, 745
LmnI GCTCC 1 cut(s) 124
Lsp1109I GCAGC 1 cut(s) 90
MaeI CTAG 1 cut(s) 401
MaeII ACGT 1 cut(s) 844
MaeIII GTNAC 5 cut(s) 82, 545, 734, 781, 935
MalI GATC 5 cut(s) 176, 326, 372, 694, 747
MboI GATC 5 cut(s) 174, 324, 370, 692, 745
MboII GAAGA 4 cut(s) 169, 334, 1000, 1084
MfeI CAATTG 1 cut(s) 155
MflI RGATCY 2 cut(s) 370, 745
MhlI GDGCHC 1 cut(s) 129
MluCI AATT 9 cut(s) 55, 64, 155, 334, 503, 526, 809, 979, 1095
MlyI GAGTC 3 cut(s) 542, 767, 1148
MroXI GAANNNNTTC 1 cut(s) 1037
MseI TTAA 1 cut(s) 411
MslI CAYNNNNRTG 2 cut(s) 768, 942
MspA1I CMGCKG 2 cut(s) 100, 367
MspI CCGG 4 cut(s) 16, 26, 39, 134
MspR9I CCNGG 4 cut(s) 17, 26, 462, 909
MunI CAATTG 1 cut(s) 155
Mva1269I GAATGC 2 cut(s) 225, 1064
MvaI CCWGG 2 cut(s) 462, 909
MwoI GCNNNNNNNGC 5 cut(s) 21, 35, 211, 220, 634
NciI CCSGG 2 cut(s) 17, 26
NdeII GATC 5 cut(s) 174, 324, 370, 692, 745
NlaIV GGNNCC 1 cut(s) 372
NmeAIII GCCGAG 2 cut(s) 249, 541
NmuCI GTSAC 3 cut(s) 82, 545, 935
NspI RCATGY 3 cut(s) 154, 214, 860
NspV TTCGAA 1 cut(s) 59
PagI TCATGA 1 cut(s) 246
PciI ACATGT 1 cut(s) 856
PcsI WCGNNNNNNNCGW 2 cut(s) 74, 841
PctI GAATGC 2 cut(s) 225, 1064
PdmI GAANNNNTTC 1 cut(s) 1037
PfeI GAWTC 3 cut(s) 256, 561, 704
PflFI GACNNNGTC 1 cut(s) 88
PkrI GCNGC 6 cut(s) 37, 73, 76, 102, 105, 204
PleI GAGTC 3 cut(s) 542, 767, 1147
PpsI GAGTC 3 cut(s) 542, 767, 1147
PscI ACATGT 1 cut(s) 856
Psp6I CCWGG 2 cut(s) 460, 907
PspGI CCWGG 2 cut(s) 460, 907
PspN4I GGNNCC 1 cut(s) 372
PspPI GGNCC 1 cut(s) 23
PstNI CAGNNNCTG 1 cut(s) 103
PsuI RGATCY 2 cut(s) 370, 745
PsyI GACNNNGTC 1 cut(s) 88
PvuII CAGCTG 1 cut(s) 367
RsaI GTAC 1 cut(s) 197
RsaNI GTAC 1 cut(s) 196
RseI CAYNNNNRTG 2 cut(s) 768, 942
SalI GTCGAC 1 cut(s) 8
SaqAI TTAA 1 cut(s) 411
SatI GCNGC 6 cut(s) 36, 72, 75, 101, 104, 203
Sau3AI GATC 5 cut(s) 174, 324, 370, 692, 745
Sau96I GGNCC 1 cut(s) 23
SchI GAGTC 3 cut(s) 542, 767, 1148
ScrFI CCNGG 4 cut(s) 17, 26, 462, 909
SduI GDGCHC 1 cut(s) 129
SfcI CTRYAG 1 cut(s) 660
SfiI GGCCNNNNNGGCC 1 cut(s) 21
SfuI TTCGAA 1 cut(s) 59
SmiMI CAYNNNNRTG 2 cut(s) 768, 942
SmlI CTYRAG 1 cut(s) 263
SmoI CTYRAG 1 cut(s) 263
Sse9I AATT 9 cut(s) 55, 64, 155, 334, 503, 526, 809, 979, 1095
SsiI CCGC 6 cut(s) 35, 71, 74, 100, 203, 867
SspMI CTAG 1 cut(s) 401
StyD4I CCNGG 4 cut(s) 15, 24, 460, 907
TaaI ACNGT 2 cut(s) 195, 495
TaiI ACGT 1 cut(s) 847
TaqI TCGA 4 cut(s) 9, 59, 92, 173
TasI AATT 9 cut(s) 55, 64, 155, 334, 503, 526, 809, 979, 1095
TauI GCSGC 5 cut(s) 38, 74, 77, 103, 205
TfiI GAWTC 3 cut(s) 256, 561, 704
Tru1I TTAA 1 cut(s) 411
Tru9I TTAA 1 cut(s) 411
TseFI GTSAC 3 cut(s) 82, 545, 935
TseI GCWGC 1 cut(s) 103
Tsp45I GTSAC 3 cut(s) 82, 545, 935
TspDTI ATGAA 4 cut(s) 235, 596, 752, 914
TspGWI ACGGA 2 cut(s) 60, 1102
Tth111I GACNNNGTC 1 cut(s) 88
XapI RAATTY 2 cut(s) 55, 526
XbaI TCTAGA 1 cut(s) 400
XceI RCATGY 3 cut(s) 154, 214, 860
XmiI GTMKAC 1 cut(s) 9
XmnI GAANNNNTTC 1 cut(s) 1037
XspI CTAG 1 cut(s) 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.