pycom01g16280

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
15926989 .. 15928197
1209 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g16280.2

Sequence Viewer

Length: 900 bp
ATGAATTCTCGACTAGAAGAGCCAGTGACGGAGTTTTCACCTATCAAAGTTAAGGATCTACCAATGATGCCCAATTGCGACCCTGAAGATTTCTATCAACTGATAACCAACATGACAAATGAACCCAAGTCTTCTCATGGACTCATCTTCAATACGTTTGAAGAGCTTGAGGGACAAGCACTTGCCACAATTCGCCAAGAATATTACCCCAATATTCCAATTTTCTCACTAGGTCCATTTCACAAGTGCGGCCCTACAACCTCTTCTTCTTCAACTAGCTTACAATCACAAGACCAAAGTAGCATTTCATGGCTAAACACTCAAGCGCCAAAATCTGTTGCTTATGTTAGCTTTGGGAGCGCTGCAAGGATTGATCACGCTCAATTTTTGGAGATTGCTTGGGGGTTAGCCAACAGTGGCCAACCCTTTTTGTGGGTGGTTCGACCCGGATTAGTTCAACAGTCAGAGTTGCATGATCAAGCCTTGCCGAATGGATTTTTAGAAGCGTTGAACGAAAGAGCTCATGTCGTGAAATGGGCTCCACAAAAAGAAGTGTTGGCCCACCCAGCAGTCGGAGCCTTTTGGACTCATTGTGGTTGGAATTCTACATTGGAGAGCATTTGTGAAGGCATACCTATGATTTGTACGCCATATTTCAGTGATCAAATGGTGGATGCAAGATTTGTGAGCGATGTTTGGAAGGTAGGGTTGCAGTTGGAGCATGGGATTGAGAGAGGTGAGGTTGAAAGAACAATTAGAAGACTGATGGTTGAGAAAGAAGGGGAAGAGATCAAAGAGAGAGCCTTAAAGTTGATGGAAAAGGCAAATCTTTCCCTCAAAGAAGGTGGCTCTTCATACCAATCTTTAGATGACTTGGTTAATCATATTTTATCCTTATAA

Protein Analysis

300

Amino Acids

33.55

Weight (kDa)

5.09

Isoelectric Point (pI)

46.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 898
AciI CCGC 1 cut(s) 249
AclWI GGATC 1 cut(s) 63
AcoI YGGCCR 1 cut(s) 418
AcsI RAATTY 2 cut(s) 4, 601
AcuI CTGAAG 1 cut(s) 105
AfaI GTAC 1 cut(s) 646
AfeI AGCGCT 1 cut(s) 361
AfiI CCNNNNNNNGG 2 cut(s) 432, 572
AgsI TTSAA 6 cut(s) 151, 161, 273, 458, 511, 746
AjuI GAANNNNNNNTTGG 2 cut(s) 593, 625
AluBI AGCT 4 cut(s) 166, 279, 351, 521
AluI AGCT 4 cut(s) 166, 279, 351, 521
Alw21I GWGCWC 1 cut(s) 523
AlwI GGATC 1 cut(s) 63
Aor51HI AGCGCT 1 cut(s) 361
AoxI GGCC 3 cut(s) 250, 418, 558
ApeKI GCWGC 1 cut(s) 362
ApoI RAATTY 2 cut(s) 4, 601
AspLEI GCGC 2 cut(s) 328, 362
AspS9I GGNCC 3 cut(s) 233, 251, 559
AsuC2I CCSGG 1 cut(s) 447
AsuHPI GGTGA 2 cut(s) 30, 749
AvaII GGWCC 1 cut(s) 233
BalI TGGCCA 1 cut(s) 420
BanII GRGCYC 2 cut(s) 523, 541
BbsI GAAGAC 2 cut(s) 123, 766
Bbv12I GWGCWC 1 cut(s) 523
BbvI GCAGC 1 cut(s) 349
BccI CCATC 2 cut(s) 760, 808
BclI TGATCA 3 cut(s) 373, 475, 661
BcnI CCSGG 1 cut(s) 447
BfaI CTAG 3 cut(s) 14, 230, 276
BfoI RGCGCY 2 cut(s) 329, 363
BisI GCNGC 2 cut(s) 250, 363
BlsI GCNGC 2 cut(s) 251, 364
Bme1390I CCNGG 1 cut(s) 447
Bme18I GGWCC 1 cut(s) 233
BmgT120I GGNCC 3 cut(s) 233, 251, 559
BmiI GGNNCC 2 cut(s) 540, 577
BmrFI CCNGG 1 cut(s) 447
BmsI GCATC 2 cut(s) 57, 664
BpiI GAAGAC 2 cut(s) 123, 766
BpuEI CTTGAG 2 cut(s) 188, 306
BpuMI CCSGG 1 cut(s) 447
BsaBI GATNNNNATC 1 cut(s) 93
Bsc4I CCNNNNNNNGG 2 cut(s) 432, 572
Bse1I ACTGG 1 cut(s) 23
Bse8I GATNNNNATC 1 cut(s) 93
BseGI GGATG 1 cut(s) 679
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 2 cut(s) 432, 572
BseNI ACTGG 1 cut(s) 23
BseXI GCAGC 1 cut(s) 349
BseYI CCCAGC 1 cut(s) 565
BshFI GGCC 3 cut(s) 252, 420, 560
BsiHKAI GWGCWC 1 cut(s) 523
BsiSI CCGG 1 cut(s) 447
BslFI GGGAC 1 cut(s) 186
BslI CCNNNNNNNGG 2 cut(s) 432, 572
BsmFI GGGAC 1 cut(s) 186
BsnI GGCC 3 cut(s) 252, 420, 560
Bsp1286I GDGCHC 2 cut(s) 523, 541
Bsp143I GATC 5 cut(s) 55, 373, 475, 661, 789
BspACI CCGC 1 cut(s) 249
BspANI GGCC 3 cut(s) 252, 420, 560
BspLI GGNNCC 2 cut(s) 540, 577
BspPI GGATC 1 cut(s) 63
BspQI GCTCTTC 3 cut(s) 12, 156, 856
BsrI ACTGG 1 cut(s) 23
BssMI GATC 5 cut(s) 55, 373, 475, 661, 789
Bst4CI ACNGT 2 cut(s) 416, 462
Bst6I CTCTTC 5 cut(s) 12, 156, 268, 780, 856
BstF5I GGATG 1 cut(s) 679
BstH2I RGCGCY 2 cut(s) 329, 363
BstHHI GCGC 2 cut(s) 328, 362
BstKTI GATC 5 cut(s) 58, 376, 478, 664, 792
BstMBI GATC 5 cut(s) 55, 373, 475, 661, 789
BstMWI GCNNNNNNNGC 4 cut(s) 357, 566, 575, 718
BstSCI CCNGG 1 cut(s) 445
BstV1I GCAGC 1 cut(s) 349
BstV2I GAAGAC 2 cut(s) 123, 766
BstX2I RGATCY 1 cut(s) 55
BstYI RGATCY 1 cut(s) 55
BsuRI GGCC 3 cut(s) 252, 420, 560
BtgZI GCGATG 1 cut(s) 705
BtsCI GGATG 1 cut(s) 679
BtsIMutI CAGTG 3 cut(s) 30, 421, 664
CfoI GCGC 2 cut(s) 328, 362
Cfr13I GGNCC 3 cut(s) 233, 251, 559
Csp6I GTAC 1 cut(s) 645
CspCI CAANNNNNGTGG 2 cut(s) 826, 861
CviAII CATG 6 cut(s) 112, 137, 309, 473, 524, 722
CviQI GTAC 1 cut(s) 645
DpnI GATC 5 cut(s) 57, 375, 477, 663, 791
DpnII GATC 5 cut(s) 55, 373, 475, 661, 789
EaeI YGGCCR 1 cut(s) 418
Eam1104I CTCTTC 5 cut(s) 12, 156, 268, 780, 856
EarI CTCTTC 5 cut(s) 12, 156, 268, 780, 856
Ecl136II GAGCTC 1 cut(s) 521
Eco24I GRGCYC 2 cut(s) 523, 541
Eco47I GGWCC 1 cut(s) 233
Eco47III AGCGCT 1 cut(s) 361
Eco53kI GAGCTC 1 cut(s) 521
Eco57I CTGAAG 1 cut(s) 105
EcoICRI GAGCTC 1 cut(s) 521
EcoRI GAATTC 2 cut(s) 4, 601
EcoT38I GRGCYC 2 cut(s) 523, 541
FaeI CATG 6 cut(s) 115, 140, 312, 476, 527, 725
FaqI GGGAC 1 cut(s) 186
FatI CATG 6 cut(s) 111, 136, 308, 472, 523, 721
FbaI TGATCA 3 cut(s) 373, 475, 661
Fnu4HI GCNGC 2 cut(s) 250, 363
FokI GGATG 1 cut(s) 686
FriOI GRGCYC 2 cut(s) 523, 541
Fsp4HI GCNGC 2 cut(s) 250, 363
FspBI CTAG 3 cut(s) 14, 230, 276
GlaI GCGC 2 cut(s) 327, 361
GluI GCNGC 2 cut(s) 250, 363
GsaI CCCAGC 1 cut(s) 569
HaeII RGCGCY 2 cut(s) 329, 363
HaeIII GGCC 3 cut(s) 252, 420, 560
HapII CCGG 1 cut(s) 447
HhaI GCGC 2 cut(s) 328, 362
Hin1II CATG 6 cut(s) 115, 140, 312, 476, 527, 725
Hin6I GCGC 2 cut(s) 326, 360
HinP1I GCGC 2 cut(s) 326, 360
HinfI GANTC 2 cut(s) 141, 586
HpaII CCGG 1 cut(s) 447
HphI GGTGA 2 cut(s) 30, 749
Hpy188I TCNGA 2 cut(s) 466, 575
Hpy188III TCNNGA 2 cut(s) 9, 529
HpyAV CCTTC 4 cut(s) 620, 694, 773, 836
HpyCH4III ACNGT 2 cut(s) 416, 462
HpyCH4IV ACGT 1 cut(s) 155
HpyCH4V TGCA 4 cut(s) 365, 472, 677, 712
HpyF10VI GCNNNNNNNGC 4 cut(s) 357, 566, 575, 718
HpySE526I ACGT 1 cut(s) 155
Hsp92II CATG 6 cut(s) 115, 140, 312, 476, 527, 725
HspAI GCGC 2 cut(s) 326, 360
Ksp22I TGATCA 3 cut(s) 373, 475, 661
Kzo9I GATC 5 cut(s) 55, 373, 475, 661, 789
LguI GCTCTTC 3 cut(s) 12, 156, 856
LmnI GCTCC 4 cut(s) 357, 544, 575, 718
LpnPI CCDG 4 cut(s) 36, 96, 460, 579
Lsp1109I GCAGC 1 cut(s) 349
LweI GCATC 2 cut(s) 57, 664
MaeI CTAG 3 cut(s) 14, 230, 276
MaeII ACGT 1 cut(s) 155
MaeIII GTNAC 1 cut(s) 25
MalI GATC 5 cut(s) 57, 375, 477, 663, 791
MboI GATC 5 cut(s) 55, 373, 475, 661, 789
MfeI CAATTG 1 cut(s) 73
MflI RGATCY 1 cut(s) 55
MhlI GDGCHC 2 cut(s) 523, 541
MlsI TGGCCA 1 cut(s) 420
MluCI AATT 7 cut(s) 4, 73, 189, 219, 383, 601, 753
MluNI TGGCCA 1 cut(s) 420
MlyI GAGTC 2 cut(s) 135, 580
MmeI TCCRAC 3 cut(s) 553, 578, 696
MnlI CCTC 5 cut(s) 163, 271, 728, 733, 845
Mox20I TGGCCA 1 cut(s) 420
MscI TGGCCA 1 cut(s) 420
MseI TTAA 3 cut(s) 51, 806, 879
MslI CAYNNNNRTG 1 cut(s) 635
Msp20I TGGCCA 1 cut(s) 420
MspI CCGG 1 cut(s) 447
MspR9I CCNGG 1 cut(s) 447
MunI CAATTG 1 cut(s) 73
MwoI GCNNNNNNNGC 4 cut(s) 357, 566, 575, 718
NciI CCSGG 1 cut(s) 447
NdeII GATC 5 cut(s) 55, 373, 475, 661, 789
NlaIII CATG 6 cut(s) 115, 140, 312, 476, 527, 725
NlaIV GGNNCC 2 cut(s) 540, 577
NmuCI GTSAC 1 cut(s) 25
PciSI GCTCTTC 3 cut(s) 12, 156, 856
PkrI GCNGC 2 cut(s) 251, 364
PleI GAGTC 2 cut(s) 135, 580
PpsI GAGTC 2 cut(s) 135, 580
PsiI TTATAA 1 cut(s) 898
Psp124BI GAGCTC 1 cut(s) 523
PspFI CCCAGC 1 cut(s) 565
PspN4I GGNNCC 2 cut(s) 540, 577
PspPI GGNCC 3 cut(s) 233, 251, 559
PsuI RGATCY 1 cut(s) 55
RsaI GTAC 1 cut(s) 646
RsaNI GTAC 1 cut(s) 645
RseI CAYNNNNRTG 1 cut(s) 635
SacI GAGCTC 1 cut(s) 523
SapI GCTCTTC 3 cut(s) 12, 156, 856
SaqAI TTAA 3 cut(s) 51, 806, 879
SatI GCNGC 2 cut(s) 250, 363
Sau3AI GATC 5 cut(s) 55, 373, 475, 661, 789
Sau96I GGNCC 3 cut(s) 233, 251, 559
SchI GAGTC 2 cut(s) 135, 580
ScrFI CCNGG 1 cut(s) 447
SduI GDGCHC 2 cut(s) 523, 541
SfaNI GCATC 2 cut(s) 57, 664
SinI GGWCC 1 cut(s) 233
SmiMI CAYNNNNRTG 1 cut(s) 635
SmlI CTYRAG 2 cut(s) 167, 321
SmoI CTYRAG 2 cut(s) 167, 321
Sse9I AATT 7 cut(s) 4, 73, 189, 219, 383, 601, 753
SsiI CCGC 1 cut(s) 249
SspI AATATT 2 cut(s) 203, 214
SspMI CTAG 3 cut(s) 14, 230, 276
SstI GAGCTC 1 cut(s) 523
StyD4I CCNGG 1 cut(s) 445
TaaI ACNGT 2 cut(s) 416, 462
TaiI ACGT 1 cut(s) 158
TaqI TCGA 2 cut(s) 10, 442
TasI AATT 7 cut(s) 4, 73, 189, 219, 383, 601, 753
TauI GCSGC 1 cut(s) 252
Tru1I TTAA 3 cut(s) 51, 806, 879
Tru9I TTAA 3 cut(s) 51, 806, 879
TscAI CASTG 3 cut(s) 30, 421, 664
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 1 cut(s) 362
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 4 cut(s) 17, 135, 297, 843
TspGWI ACGGA 1 cut(s) 44
TspRI CASTG 3 cut(s) 30, 421, 664
VpaK11BI GGWCC 1 cut(s) 233
XapI RAATTY 2 cut(s) 4, 601
XspI CTAG 3 cut(s) 14, 230, 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.