Rorug01G0346400

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
46401909 .. 46403681
1773 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0346400.1

Sequence Viewer

Length: 294 bp
ATGTTCAGAAGCTCCGGTCTCAATACCAGCGGGAGCTTCTCCTTTCCCTCCAGGTCTATCTCTGATCCAGTTATGATTAGATCTGTTGTAAAGATCCAAGACTGGGGCTCCAAGTTTATGAAGGAGATGGGGAACAATCTGGGAATGATGCGGCTGGTGATTGAAAATTGTCAAATCTGGGCCATAGACCCATATCAAGGTGTTGATGCCCAGCAGAGTATATCTACTCTGAGTTCAGACCGCACTGAGGCTTTTCTAAAACAATCCAACTTGAAGAGGCTCCAACGGCCTTAA

Protein Analysis

97

Amino Acids

10.98

Weight (kDa)

9.74

Isoelectric Point (pI)

54.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 30, 151, 241
AclWI GGATC 2 cut(s) 59, 88
AfiI CCNNNNNNNGG 3 cut(s) 103, 197, 247
AgsI TTSAA 2 cut(s) 164, 274
AjnI CCWGG 1 cut(s) 50
AluBI AGCT 2 cut(s) 12, 36
AluI AGCT 2 cut(s) 12, 36
Alw26I GTCTC 1 cut(s) 23
AlwI GGATC 2 cut(s) 59, 88
AoxI GGCC 2 cut(s) 180, 287
AspS9I GGNCC 1 cut(s) 180
AsuHPI GGTGA 1 cut(s) 169
BanII GRGCYC 1 cut(s) 110
BccI CCATC 1 cut(s) 121
BciT130I CCWGG 1 cut(s) 52
BcoDI GTCTC 1 cut(s) 23
BglII AGATCT 1 cut(s) 80
BisI GCNGC 1 cut(s) 152
BlsI GCNGC 1 cut(s) 153
Bme1390I CCNGG 1 cut(s) 52
BmgT120I GGNCC 1 cut(s) 180
BmiI GGNNCC 2 cut(s) 109, 281
BmrFI CCNGG 1 cut(s) 52
BmrI ACTGGG 1 cut(s) 112
BmsI GCATC 2 cut(s) 138, 196
BmuI ACTGGG 1 cut(s) 112
BpmI CTGGAG 1 cut(s) 34
BsaI GGTCTC 1 cut(s) 23
BsaWI WCCGGW 1 cut(s) 14
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bsc4I CCNNNNNNNGG 3 cut(s) 103, 197, 247
Bse1I ACTGG 2 cut(s) 68, 107
BseBI CCWGG 1 cut(s) 52
BseLI CCNNNNNNNGG 3 cut(s) 103, 197, 247
BseMII CTCAG 2 cut(s) 221, 237
BseNI ACTGG 2 cut(s) 68, 107
BseYI CCCAGC 1 cut(s) 210
BshFI GGCC 2 cut(s) 182, 289
BsiSI CCGG 1 cut(s) 15
BslI CCNNNNNNNGG 3 cut(s) 103, 197, 247
BsmAI GTCTC 1 cut(s) 23
BsnI GGCC 2 cut(s) 182, 289
Bso31I GGTCTC 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 110
Bsp143I GATC 3 cut(s) 64, 80, 93
BspACI CCGC 3 cut(s) 30, 151, 241
BspANI GGCC 2 cut(s) 182, 289
BspCNI CTCAG 2 cut(s) 222, 238
BspLI GGNNCC 2 cut(s) 109, 281
BspPI GGATC 2 cut(s) 59, 88
BspTNI GGTCTC 1 cut(s) 23
BsrI ACTGG 2 cut(s) 68, 107
BssMI GATC 3 cut(s) 64, 80, 93
Bst2UI CCWGG 1 cut(s) 52
Bst6I CTCTTC 1 cut(s) 269
BstDEI CTNAG 2 cut(s) 230, 246
BstKTI GATC 3 cut(s) 67, 83, 96
BstMAI GTCTC 1 cut(s) 23
BstMBI GATC 3 cut(s) 64, 80, 93
BstMWI GCNNNNNNNGC 1 cut(s) 286
BstNI CCWGG 1 cut(s) 52
BstSCI CCNGG 1 cut(s) 50
BstX2I RGATCY 2 cut(s) 80, 93
BstYI RGATCY 2 cut(s) 80, 93
BsuRI GGCC 2 cut(s) 182, 289
BtsIMutI CAGTG 1 cut(s) 243
Cfr13I GGNCC 1 cut(s) 180
CviJI RGCY 8 cut(s) 12, 36, 108, 154, 182, 251, 280, 289
CviKI_1 RGCY 8 cut(s) 12, 36, 108, 154, 182, 251, 280, 289
DdeI CTNAG 2 cut(s) 230, 246
DpnI GATC 3 cut(s) 66, 82, 95
DpnII GATC 3 cut(s) 64, 80, 93
Eam1104I CTCTTC 1 cut(s) 269
EarI CTCTTC 1 cut(s) 269
Eco24I GRGCYC 1 cut(s) 110
Eco31I GGTCTC 1 cut(s) 23
EcoRII CCWGG 1 cut(s) 50
EcoT38I GRGCYC 1 cut(s) 110
FaiI YATR 5 cut(s) 74, 119, 185, 193, 221
FauI CCCGC 1 cut(s) 23
Fnu4HI GCNGC 1 cut(s) 152
FriOI GRGCYC 1 cut(s) 110
Fsp4HI GCNGC 1 cut(s) 152
GluI GCNGC 1 cut(s) 152
GsaI CCCAGC 1 cut(s) 214
GsuI CTGGAG 1 cut(s) 34
HaeIII GGCC 2 cut(s) 182, 289
HapII CCGG 1 cut(s) 15
HpaII CCGG 1 cut(s) 15
HphI GGTGA 1 cut(s) 169
Hpy188I TCNGA 4 cut(s) 8, 64, 231, 238
HpyAV CCTTC 1 cut(s) 115
HpyF10VI GCNNNNNNNGC 1 cut(s) 286
HpyF3I CTNAG 2 cut(s) 230, 246
Kzo9I GATC 3 cut(s) 64, 80, 93
LmnI GCTCC 4 cut(s) 17, 33, 113, 285
LweI GCATC 2 cut(s) 138, 196
MalI GATC 3 cut(s) 66, 82, 95
MboI GATC 3 cut(s) 64, 80, 93
MboII GAAGA 1 cut(s) 286
MflI RGATCY 2 cut(s) 80, 93
MhlI GDGCHC 1 cut(s) 110
MluCI AATT 1 cut(s) 166
MmeI TCCRAC 1 cut(s) 291
MnlI CCTC 3 cut(s) 58, 241, 270
MseI TTAA 1 cut(s) 292
MspA1I CMGCKG 1 cut(s) 30
MspI CCGG 1 cut(s) 15
MspR9I CCNGG 1 cut(s) 52
MvaI CCWGG 1 cut(s) 52
MwoI GCNNNNNNNGC 1 cut(s) 286
NdeII GATC 3 cut(s) 64, 80, 93
NlaIV GGNNCC 2 cut(s) 109, 281
PkrI GCNGC 1 cut(s) 153
Psp6I CCWGG 1 cut(s) 50
PspFI CCCAGC 1 cut(s) 210
PspGI CCWGG 1 cut(s) 50
PspN4I GGNNCC 2 cut(s) 109, 281
PspPI GGNCC 1 cut(s) 180
PsuI RGATCY 2 cut(s) 80, 93
SaqAI TTAA 1 cut(s) 292
SatI GCNGC 1 cut(s) 152
Sau3AI GATC 3 cut(s) 64, 80, 93
Sau96I GGNCC 1 cut(s) 180
ScrFI CCNGG 1 cut(s) 52
SduI GDGCHC 1 cut(s) 110
SetI ASST 4 cut(s) 14, 38, 56, 202
SfaNI GCATC 2 cut(s) 138, 196
Sse9I AATT 1 cut(s) 166
SsiI CCGC 3 cut(s) 30, 151, 241
StyD4I CCNGG 1 cut(s) 50
TasI AATT 1 cut(s) 166
TauI GCSGC 1 cut(s) 154
Tru1I TTAA 1 cut(s) 292
Tru9I TTAA 1 cut(s) 292
TscAI CASTG 1 cut(s) 250
TspDTI ATGAA 1 cut(s) 134
TspRI CASTG 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.