Rh5AG410000

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
70846970 .. 70847600
631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG410000.1

Sequence Viewer

Length: 459 bp
ATGGAGGACATTAAGAAGGGTCGGAGGTTGATCTTGCCACTTCCAATTCAAGGCCACATAAACCCCATGCTACAGCTAGTCAACATTCTACATTCCAAAGGCTTTTCCATAACCATCATCCACACCCAGTTCAATTCCTTAAACCCTTCAACCCATCCACACTCCACCTTTCACTCGATCCCAGACAGGTTATCGGAAGCTGAGGCCACCATAAAAGATATTCTCCTTCTTTTCCGTCCTCTCAATACTAGGTACATTGAGCCTTTCCGCAAATGCTTGGCTAGGATATTGTTATCTGATGATGTTGGGGATGAGCCTGTTGCTTGCTTGATCTCCGACAGTCTTTCACTTCACTCAGTCATTTCCACTTCTGCGGGAAAAGGGTTACCTCCCAATACAAGGAATCCAAAGTTTGTGTACCAATATCATTTACCAAGTAAAGTGGCAAAACTAGTTTAG

Protein Analysis

152

Amino Acids

17.04

Weight (kDa)

9.43

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 268, 374
AclWI GGATC 1 cut(s) 172
AfaI GTAC 2 cut(s) 254, 419
AfiI CCNNNNNNNGG 2 cut(s) 50, 399
AgsI TTSAA 3 cut(s) 50, 133, 150
AhlI ACTAGT 1 cut(s) 451
AluBI AGCT 2 cut(s) 76, 200
AluI AGCT 2 cut(s) 76, 200
AlwI GGATC 1 cut(s) 172
AoxI GGCC 2 cut(s) 52, 204
BbvCI CCTCAGC 1 cut(s) 201
BccI CCATC 2 cut(s) 122, 162
BcuI ACTAGT 1 cut(s) 451
BfaI CTAG 4 cut(s) 77, 249, 282, 452
BfmI CTRYAG 1 cut(s) 71
BmrI ACTGGG 1 cut(s) 121
BmuI ACTGGG 1 cut(s) 121
Bpu10I CCTNAGC 1 cut(s) 201
Bsc4I CCNNNNNNNGG 2 cut(s) 50, 399
Bse1I ACTGG 1 cut(s) 127
BseGI GGATG 3 cut(s) 117, 154, 316
BseLI CCNNNNNNNGG 2 cut(s) 50, 399
BseMII CTCAG 2 cut(s) 192, 369
BseNI ACTGG 1 cut(s) 127
BshFI GGCC 2 cut(s) 54, 206
BslI CCNNNNNNNGG 2 cut(s) 50, 399
BsnI GGCC 2 cut(s) 54, 206
Bsp143I GATC 3 cut(s) 30, 177, 330
BspACI CCGC 2 cut(s) 268, 374
BspANI GGCC 2 cut(s) 54, 206
BspCNI CTCAG 2 cut(s) 193, 368
BspPI GGATC 1 cut(s) 172
BsrI ACTGG 1 cut(s) 127
BssMI GATC 3 cut(s) 30, 177, 330
Bst4CI ACNGT 1 cut(s) 341
BstC8I GCNNGC 1 cut(s) 325
BstDEI CTNAG 2 cut(s) 201, 355
BstEII GGTNACC 1 cut(s) 384
BstF5I GGATG 3 cut(s) 117, 154, 316
BstKTI GATC 3 cut(s) 33, 180, 333
BstMBI GATC 3 cut(s) 30, 177, 330
BstPI GGTNACC 1 cut(s) 384
BstSFI CTRYAG 1 cut(s) 71
BsuRI GGCC 2 cut(s) 54, 206
BtsCI GGATG 3 cut(s) 117, 154, 316
Cac8I GCNNGC 1 cut(s) 325
Csp6I GTAC 2 cut(s) 253, 418
CspCI CAANNNNNGTGG 2 cut(s) 423, 458
CviAII CATG 1 cut(s) 67
CviJI RGCY 8 cut(s) 54, 76, 102, 200, 206, 262, 281, 316
CviKI_1 RGCY 8 cut(s) 54, 76, 102, 200, 206, 262, 281, 316
CviQI GTAC 2 cut(s) 253, 418
DdeI CTNAG 2 cut(s) 201, 355
DpnI GATC 3 cut(s) 32, 179, 332
DpnII GATC 3 cut(s) 30, 177, 330
Eco91I GGTNACC 1 cut(s) 384
EcoO65I GGTNACC 1 cut(s) 384
FaeI CATG 1 cut(s) 70
FaiI YATR 4 cut(s) 59, 68, 110, 212
FatI CATG 1 cut(s) 66
FauI CCCGC 1 cut(s) 367
FokI GGATG 3 cut(s) 104, 141, 323
FspBI CTAG 4 cut(s) 77, 249, 282, 452
HaeIII GGCC 2 cut(s) 54, 206
Hin1II CATG 1 cut(s) 70
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HinfI GANTC 1 cut(s) 403
Hpy166II GTNNAC 2 cut(s) 82, 418
Hpy188I TCNGA 4 cut(s) 24, 196, 298, 337
Hpy8I GTNNAC 2 cut(s) 82, 418
HpyAV CCTTC 3 cut(s) 10, 156, 236
HpyCH4III ACNGT 1 cut(s) 341
HpyF3I CTNAG 2 cut(s) 201, 355
Hsp92II CATG 1 cut(s) 70
Kzo9I GATC 3 cut(s) 30, 177, 330
LpnPI CCDG 4 cut(s) 140, 172, 195, 330
MaeI CTAG 4 cut(s) 77, 249, 282, 452
MaeIII GTNAC 1 cut(s) 384
MalI GATC 3 cut(s) 32, 179, 332
MboI GATC 3 cut(s) 30, 177, 330
MluCI AATT 2 cut(s) 45, 133
MmeI TCCRAC 1 cut(s) 360
MnlI CCTC 4 cut(s) 18, 196, 249, 399
MseI TTAA 2 cut(s) 12, 140
NdeII GATC 3 cut(s) 30, 177, 330
NlaIII CATG 1 cut(s) 70
PfeI GAWTC 1 cut(s) 403
PspEI GGTNACC 1 cut(s) 384
RsaI GTAC 2 cut(s) 254, 419
RsaNI GTAC 2 cut(s) 253, 418
SaqAI TTAA 2 cut(s) 12, 140
Sau3AI GATC 3 cut(s) 30, 177, 330
SetI ASST 7 cut(s) 29, 78, 170, 191, 202, 254, 391
SfcI CTRYAG 1 cut(s) 71
SpeI ACTAGT 1 cut(s) 451
Sse9I AATT 2 cut(s) 45, 133
SsiI CCGC 2 cut(s) 268, 374
SspMI CTAG 4 cut(s) 77, 249, 282, 452
TaaI ACNGT 1 cut(s) 341
TaqI TCGA 1 cut(s) 176
TasI AATT 2 cut(s) 45, 133
TfiI GAWTC 1 cut(s) 403
Tru1I TTAA 2 cut(s) 12, 140
Tru9I TTAA 2 cut(s) 12, 140
TspGWI ACGGA 1 cut(s) 224
XspI CTAG 4 cut(s) 77, 249, 282, 452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.