FvH4_7g23661

UDP-glycosyltransferase 76F1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000232
Physical Location & Seq
Forward (+)
18411541 .. 18413337
1797 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g23661.t1

Sequence Viewer

Length: 1383 bp
ATGGAGCAGAGGAATGGCCGGAGATTGATACTTCTCCCACTGCCCCTGCAAGGCCATATGAACCCCATGCTTGAGCTGGCCAACATTCTATACTTCAAAGGCTTCTCCATAACCATCATTCACACCAGTTTCAACTCTCTAAACCCTTCAACCCATCCTCACTTCACATACCACTTGATCTCAGATAACTTATCTGAGAGCGAGGCTGTTGAAAAGGATCTCCTCCTCCTCATTTCCCATCTCAACAGAAAGTGTTATGAACCTTTCAGGGAATGCTTCGCTTCCTTGGTATCTGATGCGTCAAAAGAGCCTGTTGCTTGCTTGATCTCTGACCCTGTATTTGATTTCACTCAATCTGTTGCAGAGAGCCTCAAGATCCCAAGGATTATGTTAAGGACTGGTAGTGCCTCCTTCACTGCTGTTATATCTGCATTTCCACTCTTGCAGGGAAAGGGTTACATTCCAAAACTAGATTCTCGACTGGGAGAGCCAGTGACAGAGTTTTCACCTCTCAGAGTTAAAGATCTTCCAGTGATCAACAGTTCTGACCCAGAGAGATTCTTTAAACTAGTACACAACCTGACGTACCAAACCAAAGCATCATATGGGTTTATTTTCAATACTTTTGAAGACCTTGAGCAACACGCACTGGCCACACTTCGCAAGGAATTTCACATTCCAATTTTCCCAATAGGTCCATTTCACAAGTGTGTCCCAGCAACCACTTCTACAAGTAGATTCTTGTCACAAGACTGGAGCTGCATTTCATGGCTAAACACTCAAGCACAAAAATCTGTGATCTATGTCAGTTTCGGGAGCATTGCCACATTAGACGAAGCTCAGTTTTTGGAGATAGCCTGGGGACTAGCCAACAGCAAGCAACCCTTCTTGTGGGTGGTTCGACCTGGATCAATCTCTGGGTCAGATTGGCTTGAACCATTACCTAGTGGGTTTCATGAGACCTTGAATGGTAGGGGGCACATTGTTAAATGGGCACCTCAAAAAGAAGTGCTGGCTCATCAATCAGTTGGAGTGTTTTGGACTCATAGTGGCTGGAATTCTACATTGGAGAGTATTTGTGAGGGGGTTCCTATGATCTGTACACCATTTTTTGGTGATCAAATGTTGAATGCAAGATATGCAAGTGATGTTTGGGAAGTTGGGTTGCACCTAGAGAATGGATTGGAGAGAGGCGAAATTGAAAGAGCAATTAGAAGTCTCATGATGGAGAAAAAAGGGGATCAGATGAGAGATAGGCTGTCAAAGATAAAGGAGAAGGCAAATATATGCCTGAGACAAGGCGGCTCTTCATACCAATCTTTGAATGACTTAGTTGATCACATTTTATCCTTAGAATCATTGGCTCTCATAAAACATGATTGA

Protein Analysis

461

Amino Acids

51.88

Weight (kDa)

6.29

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 94 - 424 1.7e-36 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 994
AccB7I CCANNNNNTGG 1 cut(s) 1112
AciI CCGC 1 cut(s) 1302
AclWI GGATC 4 cut(s) 225, 370, 916, 1248
AcoI YGGCCR 3 cut(s) 16, 78, 651
AcsI RAATTY 2 cut(s) 668, 1057
AfaI GTAC 3 cut(s) 573, 587, 1102
AfiI CCNNNNNNNGG 3 cut(s) 50, 891, 1112
AhlI ACTAGT 1 cut(s) 568
AjnI CCWGG 2 cut(s) 857, 904
AjuI GAANNNNNNNTTGG 4 cut(s) 457, 489, 1049, 1081
AleI CACNNNNGTG 1 cut(s) 708
AluBI AGCT 3 cut(s) 76, 759, 839
AluI AGCT 3 cut(s) 76, 759, 839
Alw26I GTCTC 3 cut(s) 953, 1223, 1288
AlwI GGATC 4 cut(s) 225, 370, 916, 1248
AoxI GGCC 4 cut(s) 16, 52, 78, 651
ApeKI GCWGC 1 cut(s) 759
ApoI RAATTY 2 cut(s) 668, 1057
ArsI GACNNNNNNTTYG 2 cut(s) 323, 355
AspS9I GGNCC 1 cut(s) 695
AsuHPI GGTGA 2 cut(s) 498, 1127
AvaII GGWCC 1 cut(s) 695
BaeGI GKGCMC 2 cut(s) 981, 997
BalI TGGCCA 2 cut(s) 80, 653
BanI GGYRCC 1 cut(s) 994
BbsI GAAGAC 1 cut(s) 636
BbvI GCAGC 1 cut(s) 746
BccI CCATC 4 cut(s) 122, 162, 246, 1219
BciT130I CCWGG 2 cut(s) 859, 906
BclI TGATCA 3 cut(s) 534, 1117, 1336
BcoDI GTCTC 3 cut(s) 953, 1223, 1288
BcuI ACTAGT 1 cut(s) 568
BfaI CTAG 5 cut(s) 470, 569, 866, 945, 1172
BglII AGATCT 1 cut(s) 523
BisI GCNGC 2 cut(s) 760, 1303
BlsI GCNGC 2 cut(s) 761, 1304
Bme1390I CCNGG 2 cut(s) 859, 906
Bme18I GGWCC 1 cut(s) 695
BmgT120I GGNCC 1 cut(s) 695
BmiI GGNNCC 2 cut(s) 996, 1089
BmrFI CCNGG 2 cut(s) 859, 906
BmrI ACTGGG 1 cut(s) 491
BmsI GCATC 2 cut(s) 286, 608
BmuI ACTGGG 1 cut(s) 491
BpiI GAAGAC 1 cut(s) 636
BpmI CTGGAG 1 cut(s) 775
BpuEI CTTGAG 4 cut(s) 92, 356, 656, 765
BsaI GGTCTC 1 cut(s) 953
BsaJI CCNNGG 3 cut(s) 285, 380, 858
BsaXI ACNNNNNCTCC 2 cut(s) 477, 507
Bsc4I CCNNNNNNNGG 3 cut(s) 50, 891, 1112
Bse1I ACTGG 7 cut(s) 126, 403, 486, 491, 530, 654, 758
Bse3DI GCAATG 1 cut(s) 819
BseBI CCWGG 2 cut(s) 859, 906
BseDI CCNNGG 3 cut(s) 285, 380, 858
BseGI GGATG 1 cut(s) 154
BseLI CCNNNNNNNGG 3 cut(s) 50, 891, 1112
BseMI GCAATG 1 cut(s) 819
BseMII CTCAG 5 cut(s) 186, 195, 526, 854, 1283
BseNI ACTGG 7 cut(s) 126, 403, 486, 491, 530, 654, 758
BseRI GAGGAG 3 cut(s) 212, 215, 218
BseSI GKGCMC 2 cut(s) 981, 997
BseXI GCAGC 1 cut(s) 746
BseYI CCCAGC 1 cut(s) 715
BshFI GGCC 4 cut(s) 18, 54, 80, 653
BshNI GGYRCC 1 cut(s) 994
BsiSI CCGG 1 cut(s) 19
BslFI GGGAC 2 cut(s) 698, 876
BslI CCNNNNNNNGG 3 cut(s) 50, 891, 1112
BsmAI GTCTC 3 cut(s) 953, 1223, 1288
BsmFI GGGAC 2 cut(s) 698, 876
BsmI GAATGC 2 cut(s) 278, 1135
BsnI GGCC 4 cut(s) 18, 54, 80, 653
Bso31I GGTCTC 1 cut(s) 953
Bsp1286I GDGCHC 2 cut(s) 981, 997
Bsp1407I TGTACA 1 cut(s) 1100
BspACI CCGC 1 cut(s) 1302
BspANI GGCC 4 cut(s) 18, 54, 80, 653
BspCNI CTCAG 5 cut(s) 187, 194, 525, 853, 1284
BspHI TCATGA 2 cut(s) 955, 1221
BspLI GGNNCC 2 cut(s) 996, 1089
BspPI GGATC 4 cut(s) 225, 370, 916, 1248
BspQI GCTCTTC 1 cut(s) 1312
BspT107I GGYRCC 1 cut(s) 994
BspTNI GGTCTC 1 cut(s) 953
BsrDI GCAATG 1 cut(s) 819
BsrGI TGTACA 1 cut(s) 1100
BsrI ACTGG 7 cut(s) 126, 403, 486, 491, 530, 654, 758
BssECI CCNNGG 3 cut(s) 285, 380, 858
BssT1I CCWWGG 2 cut(s) 285, 380
Bst2UI CCWGG 2 cut(s) 859, 906
Bst4CI ACNGT 1 cut(s) 542
Bst6I CTCTTC 1 cut(s) 1312
BstAPI GCANNNNNTGC 1 cut(s) 1139
BstAUI TGTACA 1 cut(s) 1100
BstC8I GCNNGC 4 cut(s) 78, 319, 878, 1014
BstDEI CTNAG 7 cut(s) 181, 195, 512, 840, 1292, 1330, 1351
BstF5I GGATG 1 cut(s) 154
BstMAI GTCTC 3 cut(s) 953, 1223, 1288
BstMWI GCNNNNNNNGC 1 cut(s) 1139
BstNI CCWGG 2 cut(s) 859, 906
BstSCI CCNGG 2 cut(s) 857, 904
BstSLI GKGCMC 2 cut(s) 981, 997
BstV1I GCAGC 1 cut(s) 746
BstV2I GAAGAC 1 cut(s) 636
BstX2I RGATCY 3 cut(s) 217, 375, 523
BstYI RGATCY 3 cut(s) 217, 375, 523
BsuRI GGCC 4 cut(s) 18, 54, 80, 653
BtsCI GGATG 1 cut(s) 154
BtsI GCAGTG 2 cut(s) 38, 414
BtsIMutI CAGTG 5 cut(s) 38, 414, 498, 537, 647
Cac8I GCNNGC 4 cut(s) 78, 319, 878, 1014
CciI TCATGA 2 cut(s) 955, 1221
Cfr13I GGNCC 1 cut(s) 695
CseI GACGC 1 cut(s) 288
Csp6I GTAC 3 cut(s) 572, 586, 1101
CviAII CATG 5 cut(s) 67, 768, 956, 1222, 1376
CviQI GTAC 3 cut(s) 572, 586, 1101
DdeI CTNAG 7 cut(s) 181, 195, 512, 840, 1292, 1330, 1351
DraI TTTAAA 1 cut(s) 565
EaeI YGGCCR 3 cut(s) 16, 78, 651
Eam1104I CTCTTC 1 cut(s) 1312
EarI CTCTTC 1 cut(s) 1312
Eco130I CCWWGG 2 cut(s) 285, 380
Eco31I GGTCTC 1 cut(s) 953
Eco47I GGWCC 1 cut(s) 695
EcoRI GAATTC 1 cut(s) 1057
EcoRII CCWGG 2 cut(s) 857, 904
EcoT14I CCWWGG 2 cut(s) 285, 380
ErhI CCWWGG 2 cut(s) 285, 380
FaeI CATG 5 cut(s) 70, 771, 959, 1225, 1379
FalI AAGNNNNNCTT 2 cut(s) 869, 901
FaqI GGGAC 2 cut(s) 698, 876
FatI CATG 5 cut(s) 66, 767, 955, 1221, 1375
FauNDI CATATG 2 cut(s) 57, 604
FbaI TGATCA 3 cut(s) 534, 1117, 1336
Fnu4HI GCNGC 2 cut(s) 760, 1303
FokI GGATG 1 cut(s) 141
Fsp4HI GCNGC 2 cut(s) 760, 1303
FspBI CTAG 5 cut(s) 470, 569, 866, 945, 1172
GluI GCNGC 2 cut(s) 760, 1303
GsaI CCCAGC 1 cut(s) 719
GsuI CTGGAG 1 cut(s) 775
HaeIII GGCC 4 cut(s) 18, 54, 80, 653
HapII CCGG 1 cut(s) 19
HgaI GACGC 1 cut(s) 288
Hin1II CATG 5 cut(s) 70, 771, 959, 1225, 1379
HinfI GANTC 5 cut(s) 473, 558, 738, 1042, 1355
HpaII CCGG 1 cut(s) 19
HphI GGTGA 2 cut(s) 498, 1127
Hpy166II GTNNAC 2 cut(s) 574, 1103
Hpy188I TCNGA 8 cut(s) 184, 196, 295, 331, 515, 547, 925, 1245
Hpy188III TCNNGA 5 cut(s) 373, 477, 814, 956, 1222
Hpy8I GTNNAC 2 cut(s) 574, 1103
HpyAV CCTTC 4 cut(s) 156, 421, 895, 1270
HpyCH4III ACNGT 1 cut(s) 542
HpyCH4IV ACGT 1 cut(s) 584
HpyCH4V TGCA 8 cut(s) 49, 362, 431, 445, 762, 1133, 1142, 1168
HpyF10VI GCNNNNNNNGC 1 cut(s) 1139
HpyF3I CTNAG 7 cut(s) 181, 195, 512, 840, 1292, 1330, 1351
HpySE526I ACGT 1 cut(s) 584
Hsp92II CATG 5 cut(s) 70, 771, 959, 1225, 1379
Ksp22I TGATCA 3 cut(s) 534, 1117, 1336
LguI GCTCTTC 1 cut(s) 1312
LmnI GCTCC 3 cut(s) 4, 756, 816
Lsp1109I GCAGC 1 cut(s) 746
LweI GCATC 2 cut(s) 286, 608
MaeI CTAG 5 cut(s) 470, 569, 866, 945, 1172
MaeII ACGT 1 cut(s) 584
MaeIII GTNAC 3 cut(s) 455, 493, 744
MboII GAAGA 3 cut(s) 518, 641, 1299
MflI RGATCY 3 cut(s) 217, 375, 523
MhlI GDGCHC 2 cut(s) 981, 997
MlsI TGGCCA 2 cut(s) 80, 653
MluCI AATT 5 cut(s) 668, 681, 1057, 1197, 1209
MluNI TGGCCA 2 cut(s) 80, 653
MlyI GAGTC 1 cut(s) 1036
MmeI TCCRAC 1 cut(s) 1009
Mox20I TGGCCA 2 cut(s) 80, 653
MscI TGGCCA 2 cut(s) 80, 653
MseI TTAA 4 cut(s) 392, 519, 564, 987
MslI CAYNNNNRTG 1 cut(s) 708
Msp20I TGGCCA 2 cut(s) 80, 653
MspI CCGG 1 cut(s) 19
MspR9I CCNGG 2 cut(s) 859, 906
Mva1269I GAATGC 2 cut(s) 278, 1135
MvaI CCWGG 2 cut(s) 859, 906
MwoI GCNNNNNNNGC 1 cut(s) 1139
NdeI CATATG 2 cut(s) 57, 604
NlaIII CATG 5 cut(s) 70, 771, 959, 1225, 1379
NlaIV GGNNCC 2 cut(s) 996, 1089
NmuCI GTSAC 2 cut(s) 493, 744
OliI CACNNNNGTG 1 cut(s) 708
PagI TCATGA 2 cut(s) 955, 1221
PciSI GCTCTTC 1 cut(s) 1312
PctI GAATGC 2 cut(s) 278, 1135
PfeI GAWTC 4 cut(s) 473, 558, 738, 1355
PflMI CCANNNNNTGG 1 cut(s) 1112
PkrI GCNGC 2 cut(s) 761, 1304
PleI GAGTC 1 cut(s) 1036
PpsI GAGTC 1 cut(s) 1036
Psp6I CCWGG 2 cut(s) 857, 904
PspFI CCCAGC 1 cut(s) 715
PspGI CCWGG 2 cut(s) 857, 904
PspN4I GGNNCC 2 cut(s) 996, 1089
PspPI GGNCC 1 cut(s) 695
PsuI RGATCY 3 cut(s) 217, 375, 523
RsaI GTAC 3 cut(s) 573, 587, 1102
RsaNI GTAC 3 cut(s) 572, 586, 1101
RseI CAYNNNNRTG 1 cut(s) 708
SapI GCTCTTC 1 cut(s) 1312
SaqAI TTAA 4 cut(s) 392, 519, 564, 987
SatI GCNGC 2 cut(s) 760, 1303
Sau96I GGNCC 1 cut(s) 695
SchI GAGTC 1 cut(s) 1036
ScrFI CCNGG 2 cut(s) 859, 906
SduI GDGCHC 2 cut(s) 981, 997
SfaNI GCATC 2 cut(s) 286, 608
SinI GGWCC 1 cut(s) 695
SmiMI CAYNNNNRTG 1 cut(s) 708
SmlI CTYRAG 4 cut(s) 71, 371, 635, 780
SmoI CTYRAG 4 cut(s) 71, 371, 635, 780
SpeI ACTAGT 1 cut(s) 568
Sse9I AATT 5 cut(s) 668, 681, 1057, 1197, 1209
SsiI CCGC 1 cut(s) 1302
SspMI CTAG 5 cut(s) 470, 569, 866, 945, 1172
StyD4I CCNGG 2 cut(s) 857, 904
StyI CCWWGG 2 cut(s) 285, 380
TaaI ACNGT 1 cut(s) 542
TaiI ACGT 1 cut(s) 587
TaqI TCGA 2 cut(s) 478, 901
TasI AATT 5 cut(s) 668, 681, 1057, 1197, 1209
TatI WGTACW 2 cut(s) 571, 1100
TauI GCSGC 1 cut(s) 1305
TfiI GAWTC 4 cut(s) 473, 558, 738, 1355
Tru1I TTAA 4 cut(s) 392, 519, 564, 987
Tru9I TTAA 4 cut(s) 392, 519, 564, 987
TscAI CASTG 5 cut(s) 45, 421, 498, 537, 654
TseFI GTSAC 2 cut(s) 493, 744
TseI GCWGC 1 cut(s) 759
Tsp45I GTSAC 2 cut(s) 493, 744
TspDTI ATGAA 5 cut(s) 74, 273, 756, 944, 1299
TspRI CASTG 5 cut(s) 45, 421, 498, 537, 654
Van91I CCANNNNNTGG 1 cut(s) 1112
VpaK11BI GGWCC 1 cut(s) 695
XapI RAATTY 2 cut(s) 668, 1057
XcmI CCANNNNNNNNNTGG 1 cut(s) 73
XspI CTAG 5 cut(s) 470, 569, 866, 945, 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.