pycom01g16290

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
15930233 .. 15931318
1086 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g16290.1

Sequence Viewer

Length: 714 bp
ATGTTAGAGACCGTGTGCGCCACTACCTTGGTTTTTTATGCTGCGTTTACTCTTCTCAAAGAAAAAGGATACTTTCCAATACAAGTCCCAATTGCATGCGATTCTGAGAAACTTTATCAACTGGTCGTCGACGTGGCAAATGAACCAAAGTCTTCTTATGGACTCATCTTAAATACACTTGAAGATCTTGAAGGACATGCTCTAGACACGATCCGCCAAGCACACCTGCCCATTGTTTCCATTTTCCCAATAGGTCCATTTCACAAGTGTTGCCGTAAAGTATCCTCTTCAAGTAGTTCATTGACACATGACCAGAGTTGCATTTCATGGCTGAACACTCAAGCGCCAAAATCTGTTGCTTATGTTAGCTTTGGCAGCGTTGCCCAGATAGATCAAGCTCAATTTTTGGAGATTGCTTGGGGGTTGGCCAACAGTGGCCAATCCTTTTTGTCGGTGGTTCGACCCGAATTAATTCAAGAGTTGGATTGGCTTAGAGTGTTGCCTAACGAGTTTTTAGAATCGTTGAACGGAAGAGCTTACATTGTGAAATGGGCTTTACAAAAACAAGTGCTGGCCCACCCGGTAGTCGGAGCCTTTTGGACTCACAATGGTTGGAATTCTACAATAGAGAGCATTAGTGAGAGGATCCCTATGATCTGCACGCCATTTTTTAGTCAACAAATGGTGAATGCAAGAAATGTGAGTGATGTTTAG

Protein Analysis

238

Amino Acids

26.44

Weight (kDa)

5.65

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 106 - 235 3.2e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 234
Acc36I ACCTGC 1 cut(s) 234
AccI GTMKAC 1 cut(s) 129
AciI CCGC 1 cut(s) 214
AclWI GGATC 3 cut(s) 205, 640, 653
AcoI YGGCCR 2 cut(s) 426, 436
AcsI RAATTY 1 cut(s) 616
AfiI CCNNNNNNNGG 1 cut(s) 587
AgsI TTSAA 5 cut(s) 182, 191, 291, 476, 526
AjiI CACGTC 1 cut(s) 133
AluBI AGCT 3 cut(s) 369, 398, 536
AluI AGCT 3 cut(s) 369, 398, 536
Alw26I GTCTC 1 cut(s) 2
AlwI GGATC 3 cut(s) 205, 640, 653
AoxI GGCC 3 cut(s) 426, 436, 573
ApeKI GCWGC 2 cut(s) 41, 375
ApoI RAATTY 1 cut(s) 616
AseI ATTAAT 1 cut(s) 470
Asp700I GAANNNNTTC 1 cut(s) 471
AspLEI GCGC 2 cut(s) 20, 346
AspS9I GGNCC 2 cut(s) 254, 574
AsuC2I CCSGG 1 cut(s) 581
AsuHPI GGTGA 1 cut(s) 697
AvaII GGWCC 1 cut(s) 254
BalI TGGCCA 2 cut(s) 428, 438
BamHI GGATCC 1 cut(s) 645
BbsI GAAGAC 1 cut(s) 144
BbvI GCAGC 2 cut(s) 28, 387
BceAI ACGGC 1 cut(s) 258
BciVI GTATCC 2 cut(s) 62, 292
BcnI CCSGG 1 cut(s) 581
BcoDI GTCTC 1 cut(s) 2
BfaI CTAG 1 cut(s) 203
BfoI RGCGCY 1 cut(s) 347
BfuAI ACCTGC 1 cut(s) 234
BfuI GTATCC 2 cut(s) 62, 292
BglII AGATCT 1 cut(s) 184
BisI GCNGC 2 cut(s) 42, 376
BlsI GCNGC 2 cut(s) 43, 377
Bme1390I CCNGG 1 cut(s) 581
Bme18I GGWCC 1 cut(s) 254
BmgBI CACGTC 1 cut(s) 133
BmgT120I GGNCC 2 cut(s) 254, 574
BmiI GGNNCC 2 cut(s) 592, 647
BmrFI CCNGG 1 cut(s) 581
BpiI GAAGAC 1 cut(s) 144
BpuEI CTTGAG 1 cut(s) 324
BpuMI CCSGG 1 cut(s) 581
BsaI GGTCTC 1 cut(s) 2
BsaJI CCNNGG 1 cut(s) 27
Bsc4I CCNNNNNNNGG 1 cut(s) 587
Bse1I ACTGG 1 cut(s) 126
BseDI CCNNGG 1 cut(s) 27
BseLI CCNNNNNNNGG 1 cut(s) 587
BseMII CTCAG 1 cut(s) 96
BseNI ACTGG 1 cut(s) 126
BseXI GCAGC 2 cut(s) 28, 387
BsgI GTGCAG 1 cut(s) 643
BshFI GGCC 3 cut(s) 428, 438, 575
BsiSI CCGG 1 cut(s) 581
BslFI GGGAC 1 cut(s) 71
BslI CCNNNNNNNGG 1 cut(s) 587
BsmAI GTCTC 1 cut(s) 2
BsmFI GGGAC 1 cut(s) 71
BsmI GAATGC 1 cut(s) 694
BsnI GGCC 3 cut(s) 428, 438, 575
Bso31I GGTCTC 1 cut(s) 2
Bsp143I GATC 5 cut(s) 184, 210, 391, 645, 654
BspACI CCGC 1 cut(s) 214
BspANI GGCC 3 cut(s) 428, 438, 575
BspCNI CTCAG 1 cut(s) 97
BspLI GGNNCC 2 cut(s) 592, 647
BspMI ACCTGC 1 cut(s) 234
BspPI GGATC 3 cut(s) 205, 640, 653
BspQI GCTCTTC 1 cut(s) 526
BspTNI GGTCTC 1 cut(s) 2
BsrI ACTGG 1 cut(s) 126
BssECI CCNNGG 1 cut(s) 27
BssMI GATC 5 cut(s) 184, 210, 391, 645, 654
BssT1I CCWWGG 1 cut(s) 27
Bst4CI ACNGT 2 cut(s) 13, 434
Bst6I CTCTTC 3 cut(s) 57, 292, 526
BstC8I GCNNGC 3 cut(s) 97, 573, 662
BstDEI CTNAG 2 cut(s) 105, 491
BstH2I RGCGCY 1 cut(s) 347
BstHHI GCGC 2 cut(s) 20, 346
BstKTI GATC 5 cut(s) 187, 213, 394, 648, 657
BstMAI GTCTC 1 cut(s) 2
BstMBI GATC 5 cut(s) 184, 210, 391, 645, 654
BstMWI GCNNNNNNNGC 1 cut(s) 375
BstNSI RCATGY 2 cut(s) 99, 200
BstSCI CCNGG 1 cut(s) 579
BstV1I GCAGC 2 cut(s) 28, 387
BstV2I GAAGAC 1 cut(s) 144
BstX2I RGATCY 2 cut(s) 184, 645
BstXI CCANNNNNNTGG 1 cut(s) 28
BstYI RGATCY 2 cut(s) 184, 645
BsuI GTATCC 2 cut(s) 62, 292
BsuRI GGCC 3 cut(s) 428, 438, 575
BtrI CACGTC 1 cut(s) 133
BtsIMutI CAGTG 1 cut(s) 439
BveI ACCTGC 1 cut(s) 234
Cac8I GCNNGC 3 cut(s) 97, 573, 662
CfoI GCGC 2 cut(s) 20, 346
Cfr13I GGNCC 2 cut(s) 254, 574
CviAII CATG 4 cut(s) 96, 197, 308, 327
DdeI CTNAG 2 cut(s) 105, 491
DpnI GATC 5 cut(s) 186, 212, 393, 647, 656
DpnII GATC 5 cut(s) 184, 210, 391, 645, 654
EaeI YGGCCR 2 cut(s) 426, 436
Eam1104I CTCTTC 3 cut(s) 57, 292, 526
EarI CTCTTC 3 cut(s) 57, 292, 526
EciI GGCGGA 1 cut(s) 203
Eco130I CCWWGG 1 cut(s) 27
Eco31I GGTCTC 1 cut(s) 2
Eco47I GGWCC 1 cut(s) 254
EcoRI GAATTC 1 cut(s) 616
EcoT14I CCWWGG 1 cut(s) 27
ErhI CCWWGG 1 cut(s) 27
FaeI CATG 4 cut(s) 99, 200, 311, 330
FaiI YATR 8 cut(s) 39, 97, 159, 198, 309, 328, 363, 653
FaqI GGGAC 1 cut(s) 71
FatI CATG 4 cut(s) 95, 196, 307, 326
FblI GTMKAC 1 cut(s) 129
Fnu4HI GCNGC 2 cut(s) 42, 376
Fsp4HI GCNGC 2 cut(s) 42, 376
FspBI CTAG 1 cut(s) 203
GlaI GCGC 2 cut(s) 19, 345
GluI GCNGC 2 cut(s) 42, 376
HaeII RGCGCY 1 cut(s) 347
HaeIII GGCC 3 cut(s) 428, 438, 575
HapII CCGG 1 cut(s) 581
HhaI GCGC 2 cut(s) 20, 346
Hin1II CATG 4 cut(s) 99, 200, 311, 330
Hin6I GCGC 2 cut(s) 18, 344
HinP1I GCGC 2 cut(s) 18, 344
HincII GTYRAC 2 cut(s) 130, 677
HindII GTYRAC 2 cut(s) 130, 677
HinfI GANTC 4 cut(s) 101, 162, 518, 601
HpaII CCGG 1 cut(s) 581
HphI GGTGA 1 cut(s) 697
Hpy166II GTNNAC 3 cut(s) 48, 130, 677
Hpy188I TCNGA 2 cut(s) 106, 590
Hpy188III TCNNGA 3 cut(s) 188, 203, 476
Hpy8I GTNNAC 3 cut(s) 48, 130, 677
Hpy99I CGWCG 2 cut(s) 131, 134
HpyAV CCTTC 1 cut(s) 185
HpyCH4III ACNGT 2 cut(s) 13, 434
HpyCH4IV ACGT 1 cut(s) 132
HpyCH4V TGCA 4 cut(s) 95, 321, 660, 692
HpyF10VI GCNNNNNNNGC 1 cut(s) 375
HpyF3I CTNAG 2 cut(s) 105, 491
HpySE526I ACGT 1 cut(s) 132
Hsp92II CATG 4 cut(s) 99, 200, 311, 330
HspAI GCGC 2 cut(s) 18, 344
Kzo9I GATC 5 cut(s) 184, 210, 391, 645, 654
LguI GCTCTTC 1 cut(s) 526
LmnI GCTCC 1 cut(s) 590
LpnPI CCDG 6 cut(s) 107, 239, 326, 398, 557, 594
Lsp1109I GCAGC 2 cut(s) 28, 387
MaeI CTAG 1 cut(s) 203
MaeII ACGT 1 cut(s) 132
MalI GATC 5 cut(s) 186, 212, 393, 647, 656
MboI GATC 5 cut(s) 184, 210, 391, 645, 654
MboII GAAGA 5 cut(s) 44, 144, 194, 279, 543
MfeI CAATTG 1 cut(s) 90
MflI RGATCY 2 cut(s) 184, 645
MlsI TGGCCA 2 cut(s) 428, 438
MluCI AATT 5 cut(s) 90, 401, 467, 471, 616
MluNI TGGCCA 2 cut(s) 428, 438
MlyI GAGTC 2 cut(s) 156, 595
MmeI TCCRAC 3 cut(s) 462, 568, 593
MnlI CCTC 2 cut(s) 295, 636
Mox20I TGGCCA 2 cut(s) 428, 438
MroXI GAANNNNTTC 1 cut(s) 471
MscI TGGCCA 2 cut(s) 428, 438
MseI TTAA 2 cut(s) 170, 470
Msp20I TGGCCA 2 cut(s) 428, 438
MspI CCGG 1 cut(s) 581
MspR9I CCNGG 1 cut(s) 581
MunI CAATTG 1 cut(s) 90
Mva1269I GAATGC 1 cut(s) 694
MwoI GCNNNNNNNGC 1 cut(s) 375
NciI CCSGG 1 cut(s) 581
NdeII GATC 5 cut(s) 184, 210, 391, 645, 654
NlaIII CATG 4 cut(s) 99, 200, 311, 330
NlaIV GGNNCC 2 cut(s) 592, 647
NspI RCATGY 2 cut(s) 99, 200
PaeI GCATGC 1 cut(s) 99
PaqCI CACCTGC 1 cut(s) 234
PciSI GCTCTTC 1 cut(s) 526
PctI GAATGC 1 cut(s) 694
PdmI GAANNNNTTC 1 cut(s) 471
PfeI GAWTC 2 cut(s) 101, 518
PkrI GCNGC 2 cut(s) 43, 377
PleI GAGTC 2 cut(s) 156, 595
PpsI GAGTC 2 cut(s) 156, 595
PshBI ATTAAT 1 cut(s) 470
PspN4I GGNNCC 2 cut(s) 592, 647
PspPI GGNCC 2 cut(s) 254, 574
PsuI RGATCY 2 cut(s) 184, 645
SalI GTCGAC 1 cut(s) 128
SapI GCTCTTC 1 cut(s) 526
SaqAI TTAA 2 cut(s) 170, 470
SatI GCNGC 2 cut(s) 42, 376
Sau3AI GATC 5 cut(s) 184, 210, 391, 645, 654
Sau96I GGNCC 2 cut(s) 254, 574
SchI GAGTC 2 cut(s) 156, 595
ScrFI CCNGG 1 cut(s) 581
SetI ASST 7 cut(s) 29, 135, 228, 256, 371, 400, 538
SgrDI CGTCGACG 1 cut(s) 128
SinI GGWCC 1 cut(s) 254
SmlI CTYRAG 1 cut(s) 339
SmoI CTYRAG 1 cut(s) 339
SphI GCATGC 1 cut(s) 99
Sse9I AATT 5 cut(s) 90, 401, 467, 471, 616
SsiI CCGC 1 cut(s) 214
SspMI CTAG 1 cut(s) 203
StyD4I CCNGG 1 cut(s) 579
StyI CCWWGG 1 cut(s) 27
TaaI ACNGT 2 cut(s) 13, 434
TaiI ACGT 1 cut(s) 135
TaqI TCGA 2 cut(s) 129, 460
TasI AATT 5 cut(s) 90, 401, 467, 471, 616
TfiI GAWTC 2 cut(s) 101, 518
Tru1I TTAA 2 cut(s) 170, 470
Tru9I TTAA 2 cut(s) 170, 470
TscAI CASTG 1 cut(s) 439
TseI GCWGC 2 cut(s) 41, 375
TspDTI ATGAA 3 cut(s) 156, 288, 315
TspGWI ACGGA 1 cut(s) 543
TspRI CASTG 1 cut(s) 439
VpaK11BI GGWCC 1 cut(s) 254
VspI ATTAAT 1 cut(s) 470
XapI RAATTY 1 cut(s) 616
XbaI TCTAGA 1 cut(s) 202
XceI RCATGY 2 cut(s) 99, 200
XmiI GTMKAC 1 cut(s) 129
XmnI GAANNNNTTC 1 cut(s) 471
XspI CTAG 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.