pycom01g16270

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
15926454 .. 15926873
420 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g16270.1

Sequence Viewer

Length: 420 bp
ATGATTGTCGATTCAAAAATGGAGCAAAGCAAAGGCAGGAGAGTCATCCTCTTCCCACTGCCCTTCCAAGGGCACATAAACCCTATGCTAGAACTGGCCAACATTCTGCATTCCAAAGGCTTCTCCATAGCCATCCTCCACACCAGCTTCAACTCCCTCAGTCCTTCAACCCGAAACCCATACTTCACCTACCATTCAATCCCTGTTGACTTGACAGAAACCGAGGTCTCATCCAAGGATTTCACCGTTCTTCTTTCTATTCTAAATGCTAAATGTGTTGAGCCTTTCAGAGAATGCTTGTCCGGGTTGTTATCCGACGACGTTAATTCGGAGGACCCCATTGCATGCTTGATCTCGGATCCTCTCTTCAACTTCACTCGATCGGTTGCAGAAAGCTTTAAGCTGCCGAGGGCCACATAA

Protein Analysis

140

Amino Acids

15.52

Weight (kDa)

5.75

Isoelectric Point (pI)

60.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 353, 366
AcoI YGGCCR 1 cut(s) 96
AfiI CCNNNNNNNGG 2 cut(s) 68, 69
AgsI TTSAA 5 cut(s) 15, 151, 168, 198, 370
AluBI AGCT 3 cut(s) 147, 396, 403
AluI AGCT 3 cut(s) 147, 396, 403
Alw26I GTCTC 1 cut(s) 232
AlwI GGATC 2 cut(s) 353, 366
AoxI GGCC 2 cut(s) 96, 411
ApeKI GCWGC 1 cut(s) 403
AspS9I GGNCC 2 cut(s) 334, 411
AsuC2I CCSGG 1 cut(s) 304
AsuHPI GGTGA 2 cut(s) 178, 235
AvaII GGWCC 1 cut(s) 334
BaeGI GKGCMC 1 cut(s) 75
BalI TGGCCA 1 cut(s) 98
BamHI GGATCC 1 cut(s) 358
BbvI GCAGC 1 cut(s) 390
BccI CCATC 1 cut(s) 140
BcnI CCSGG 1 cut(s) 304
BcoDI GTCTC 1 cut(s) 232
BfaI CTAG 1 cut(s) 89
BisI GCNGC 1 cut(s) 404
BlsI GCNGC 1 cut(s) 405
Bme1390I CCNGG 1 cut(s) 304
Bme18I GGWCC 1 cut(s) 334
BmgT120I GGNCC 2 cut(s) 334, 411
BmiI GGNNCC 2 cut(s) 336, 360
BmrFI CCNGG 1 cut(s) 304
BplI GAGNNNNNCTC 2 cut(s) 33, 65
BpuMI CCSGG 1 cut(s) 304
BsaI GGTCTC 1 cut(s) 232
BsaJI CCNNGG 4 cut(s) 67, 222, 234, 407
Bsc4I CCNNNNNNNGG 2 cut(s) 68, 69
Bse1I ACTGG 1 cut(s) 99
Bse3DI GCAATG 1 cut(s) 339
BseDI CCNNGG 4 cut(s) 67, 222, 234, 407
BseGI GGATG 3 cut(s) 45, 132, 230
BseLI CCNNNNNNNGG 2 cut(s) 68, 69
BseMI GCAATG 1 cut(s) 339
BseMII CTCAG 1 cut(s) 172
BseNI ACTGG 1 cut(s) 99
BseSI GKGCMC 1 cut(s) 75
BseXI GCAGC 1 cut(s) 390
Bsh1285I CGRYCG 1 cut(s) 383
BshFI GGCC 2 cut(s) 98, 413
BsiEI CGRYCG 1 cut(s) 383
BsiSI CCGG 1 cut(s) 303
BslI CCNNNNNNNGG 2 cut(s) 68, 69
BsmAI GTCTC 1 cut(s) 232
BsmI GAATGC 2 cut(s) 109, 299
BsnI GGCC 2 cut(s) 98, 413
Bso31I GGTCTC 1 cut(s) 232
Bsp1286I GDGCHC 1 cut(s) 75
Bsp143I GATC 3 cut(s) 351, 358, 380
BspANI GGCC 2 cut(s) 98, 413
BspCNI CTCAG 1 cut(s) 171
BspLI GGNNCC 2 cut(s) 336, 360
BspPI GGATC 2 cut(s) 353, 366
BspTNI GGTCTC 1 cut(s) 232
BsrDI GCAATG 1 cut(s) 339
BsrI ACTGG 1 cut(s) 99
BssECI CCNNGG 4 cut(s) 67, 222, 234, 407
BssMI GATC 3 cut(s) 351, 358, 380
BssT1I CCWWGG 2 cut(s) 67, 234
Bst4CI ACNGT 1 cut(s) 247
Bst6I CTCTTC 2 cut(s) 56, 371
BstC8I GCNNGC 1 cut(s) 346
BstDEI CTNAG 1 cut(s) 158
BstF5I GGATG 3 cut(s) 45, 132, 230
BstKTI GATC 3 cut(s) 354, 361, 383
BstMAI GTCTC 1 cut(s) 232
BstMBI GATC 3 cut(s) 351, 358, 380
BstMCI CGRYCG 1 cut(s) 383
BstNSI RCATGY 1 cut(s) 348
BstSCI CCNGG 1 cut(s) 302
BstSLI GKGCMC 1 cut(s) 75
BstV1I GCAGC 1 cut(s) 390
BstX2I RGATCY 1 cut(s) 358
BstYI RGATCY 1 cut(s) 358
BsuRI GGCC 2 cut(s) 98, 413
BtsCI GGATG 3 cut(s) 45, 132, 230
BtsI GCAGTG 1 cut(s) 56
BtsIMutI CAGTG 1 cut(s) 56
Cac8I GCNNGC 1 cut(s) 346
Cfr13I GGNCC 2 cut(s) 334, 411
CviAII CATG 1 cut(s) 345
CviJI RGCY 8 cut(s) 98, 120, 131, 147, 283, 396, 403, 413
CviKI_1 RGCY 8 cut(s) 98, 120, 131, 147, 283, 396, 403, 413
DdeI CTNAG 1 cut(s) 158
DpnI GATC 3 cut(s) 353, 360, 382
DpnII GATC 3 cut(s) 351, 358, 380
EaeI YGGCCR 1 cut(s) 96
Eam1104I CTCTTC 2 cut(s) 56, 371
EarI CTCTTC 2 cut(s) 56, 371
Eco130I CCWWGG 2 cut(s) 67, 234
Eco31I GGTCTC 1 cut(s) 232
Eco47I GGWCC 1 cut(s) 334
EcoO109I RGGNCCY 1 cut(s) 334
EcoT14I CCWWGG 2 cut(s) 67, 234
ErhI CCWWGG 2 cut(s) 67, 234
FaeI CATG 1 cut(s) 348
FaiI YATR 6 cut(s) 77, 86, 128, 181, 346, 418
FatI CATG 1 cut(s) 344
Fnu4HI GCNGC 1 cut(s) 404
FokI GGATG 3 cut(s) 32, 119, 217
Fsp4HI GCNGC 1 cut(s) 404
FspBI CTAG 1 cut(s) 89
GluI GCNGC 1 cut(s) 404
HaeIII GGCC 2 cut(s) 98, 413
HapII CCGG 1 cut(s) 303
Hin1II CATG 1 cut(s) 348
HincII GTYRAC 1 cut(s) 208
HindII GTYRAC 1 cut(s) 208
HindIII AAGCTT 1 cut(s) 394
HinfI GANTC 2 cut(s) 11, 42
HpaII CCGG 1 cut(s) 303
HphI GGTGA 2 cut(s) 178, 235
Hpy166II GTNNAC 1 cut(s) 208
Hpy188I TCNGA 4 cut(s) 290, 316, 331, 358
Hpy8I GTNNAC 1 cut(s) 208
Hpy99I CGWCG 2 cut(s) 320, 323
HpyAV CCTTC 2 cut(s) 73, 174
HpyCH4III ACNGT 1 cut(s) 247
HpyCH4IV ACGT 1 cut(s) 321
HpyCH4V TGCA 3 cut(s) 109, 344, 389
HpyF3I CTNAG 1 cut(s) 158
HpySE526I ACGT 1 cut(s) 321
Hsp92II CATG 1 cut(s) 348
Kzo9I GATC 3 cut(s) 351, 358, 380
LmnI GCTCC 1 cut(s) 22
LpnPI CCDG 5 cut(s) 22, 80, 157, 216, 316
Lsp1109I GCAGC 1 cut(s) 390
MaeI CTAG 1 cut(s) 89
MaeII ACGT 1 cut(s) 321
MalI GATC 3 cut(s) 353, 360, 382
MboI GATC 3 cut(s) 351, 358, 380
MboII GAAGA 3 cut(s) 43, 242, 358
MflI RGATCY 1 cut(s) 358
MhlI GDGCHC 1 cut(s) 75
MlsI TGGCCA 1 cut(s) 98
MluCI AATT 1 cut(s) 325
MluNI TGGCCA 1 cut(s) 98
MlyI GAGTC 1 cut(s) 51
MmeI TCCRAC 1 cut(s) 339
MnlI CCTC 7 cut(s) 59, 146, 167, 217, 325, 372, 402
Mox20I TGGCCA 1 cut(s) 98
MscI TGGCCA 1 cut(s) 98
MseI TTAA 2 cut(s) 324, 399
Msp20I TGGCCA 1 cut(s) 98
MspI CCGG 1 cut(s) 303
MspR9I CCNGG 1 cut(s) 304
Mva1269I GAATGC 2 cut(s) 109, 299
NciI CCSGG 1 cut(s) 304
NdeII GATC 3 cut(s) 351, 358, 380
NlaIII CATG 1 cut(s) 348
NlaIV GGNNCC 2 cut(s) 336, 360
NspI RCATGY 1 cut(s) 348
PaeI GCATGC 1 cut(s) 348
PctI GAATGC 2 cut(s) 109, 299
PfeI GAWTC 1 cut(s) 11
PkrI GCNGC 1 cut(s) 405
Ple19I CGATCG 1 cut(s) 383
PleI GAGTC 1 cut(s) 50
PpsI GAGTC 1 cut(s) 50
PpuMI RGGWCCY 1 cut(s) 334
Psp5II RGGWCCY 1 cut(s) 334
PspN4I GGNNCC 2 cut(s) 336, 360
PspPI GGNCC 2 cut(s) 334, 411
PspPPI RGGWCCY 1 cut(s) 334
PsuI RGATCY 1 cut(s) 358
PvuI CGATCG 1 cut(s) 383
SaqAI TTAA 2 cut(s) 324, 399
SatI GCNGC 1 cut(s) 404
Sau3AI GATC 3 cut(s) 351, 358, 380
Sau96I GGNCC 2 cut(s) 334, 411
SchI GAGTC 1 cut(s) 51
ScrFI CCNGG 1 cut(s) 304
SduI GDGCHC 1 cut(s) 75
SetI ASST 6 cut(s) 149, 191, 228, 324, 398, 405
SinI GGWCC 1 cut(s) 334
SphI GCATGC 1 cut(s) 348
Sse9I AATT 1 cut(s) 325
SspMI CTAG 1 cut(s) 89
StyD4I CCNGG 1 cut(s) 302
StyI CCWWGG 2 cut(s) 67, 234
TaaI ACNGT 1 cut(s) 247
TaiI ACGT 1 cut(s) 324
TaqI TCGA 2 cut(s) 9, 379
TasI AATT 1 cut(s) 325
TfiI GAWTC 1 cut(s) 11
Tru1I TTAA 2 cut(s) 324, 399
Tru9I TTAA 2 cut(s) 324, 399
TscAI CASTG 1 cut(s) 63
TseI GCWGC 1 cut(s) 403
TspRI CASTG 1 cut(s) 63
VpaK11BI GGWCC 1 cut(s) 334
XceI RCATGY 1 cut(s) 348
XspI CTAG 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.