Rh1CG177300

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
39138807 .. 39140756
1950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG177300.1

Sequence Viewer

Length: 513 bp
ATGGAGCAAATTACAAAGGGAAAGAGGTTGATCTTGTTCCCACTTCCCCTTGAAGGCCATATAAACCCCATGCTACAGCTGGCTAATCTTCTACACTCCAAAGGCTTCTCCATAACCATCATCCACACCCAGTTCAACTCCCCAAACCCTTCACTCCATCCACACTTCACCTTTCGCTCAATCCCAGATGGGTTGTCTGAAACTGAGGCTTCCCCCAAAGATATCATCCTTCTCTTCTCTCTTTTCAATACTAAATGTGTTGAACCCTTCAAGTTATGCTTGTCTAGCTTGTTATCAGAGGAGCCTGTTGCTTGTTTGATCTCTGACTCTATATTCCATTTCACTCAATCTGTTGCTGAGAGCTTTAAGCTCCCAAGGATTGTCTTTGAGACCGGGGGTATGACTTCTTATGCTGTTTTTACTCAGTTTCCACTATTAAGAGAAAAGGGCTACCTTCCGGTCACGCAAGGTGAGTTTTCTTCCTTAAGGCCTCGTTTGGTTCGCGGAAAGTAA

Protein Analysis

170

Amino Acids

19.11

Weight (kDa)

8.5

Isoelectric Point (pI)

48.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 504
AciI CCGC 1 cut(s) 504
AfiI CCNNNNNNNGG 1 cut(s) 53
AflII CTTAAG 1 cut(s) 484
AgsI TTSAA 5 cut(s) 53, 136, 247, 263, 271
AluBI AGCT 4 cut(s) 79, 288, 363, 370
AluI AGCT 4 cut(s) 79, 288, 363, 370
Alw26I GTCTC 1 cut(s) 383
AoxI GGCC 2 cut(s) 55, 488
AsuC2I CCSGG 1 cut(s) 394
AsuHPI GGTGA 2 cut(s) 160, 482
BccI CCATC 3 cut(s) 125, 165, 182
BcnI CCSGG 1 cut(s) 394
BcoDI GTCTC 1 cut(s) 383
BfaI CTAG 1 cut(s) 285
BfmI CTRYAG 1 cut(s) 74
BfrI CTTAAG 1 cut(s) 484
Bme1390I CCNGG 1 cut(s) 394
BmiI GGNNCC 1 cut(s) 303
BmrFI CCNGG 1 cut(s) 394
BmrI ACTGGG 1 cut(s) 124
BmuI ACTGGG 1 cut(s) 124
BpuMI CCSGG 1 cut(s) 394
BsaI GGTCTC 1 cut(s) 383
BsaJI CCNNGG 2 cut(s) 374, 393
BsaWI WCCGGW 1 cut(s) 457
Bsc4I CCNNNNNNNGG 1 cut(s) 53
Bse1I ACTGG 1 cut(s) 130
BseDI CCNNGG 2 cut(s) 374, 393
BseGI GGATG 3 cut(s) 120, 157, 225
BseLI CCNNNNNNNGG 1 cut(s) 53
BseMII CTCAG 3 cut(s) 195, 348, 437
BseNI ACTGG 1 cut(s) 130
BseRI GAGGAG 1 cut(s) 314
Bsh1236I CGCG 1 cut(s) 504
BshFI GGCC 2 cut(s) 57, 490
BsiSI CCGG 2 cut(s) 393, 458
BslI CCNNNNNNNGG 1 cut(s) 53
BsmAI GTCTC 1 cut(s) 383
BsnI GGCC 2 cut(s) 57, 490
Bso31I GGTCTC 1 cut(s) 383
Bsp143I GATC 2 cut(s) 30, 318
BspACI CCGC 1 cut(s) 504
BspANI GGCC 2 cut(s) 57, 490
BspCNI CTCAG 3 cut(s) 196, 349, 436
BspFNI CGCG 1 cut(s) 504
BspLI GGNNCC 1 cut(s) 303
BspTI CTTAAG 1 cut(s) 484
BspTNI GGTCTC 1 cut(s) 383
BsrI ACTGG 1 cut(s) 130
BssECI CCNNGG 2 cut(s) 374, 393
BssMI GATC 2 cut(s) 30, 318
BssT1I CCWWGG 1 cut(s) 374
Bst6I CTCTTC 1 cut(s) 239
BstAFI CTTAAG 1 cut(s) 484
BstC8I GCNNGC 1 cut(s) 81
BstDEI CTNAG 3 cut(s) 204, 357, 423
BstF5I GGATG 3 cut(s) 120, 157, 225
BstFNI CGCG 1 cut(s) 504
BstKTI GATC 2 cut(s) 33, 321
BstMAI GTCTC 1 cut(s) 383
BstMBI GATC 2 cut(s) 30, 318
BstMWI GCNNNNNNNGC 1 cut(s) 285
BstSCI CCNGG 1 cut(s) 392
BstSFI CTRYAG 1 cut(s) 74
BstUI CGCG 1 cut(s) 504
BsuRI GGCC 2 cut(s) 57, 490
BtsCI GGATG 3 cut(s) 120, 157, 225
Cac8I GCNNGC 1 cut(s) 81
CviAII CATG 1 cut(s) 70
DdeI CTNAG 3 cut(s) 204, 357, 423
DpnI GATC 2 cut(s) 32, 320
DpnII GATC 2 cut(s) 30, 318
Eam1104I CTCTTC 1 cut(s) 239
EarI CTCTTC 1 cut(s) 239
Eco130I CCWWGG 1 cut(s) 374
Eco147I AGGCCT 1 cut(s) 490
Eco31I GGTCTC 1 cut(s) 383
Eco32I GATATC 1 cut(s) 223
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 374
ErhI CCWWGG 1 cut(s) 374
FaeI CATG 1 cut(s) 73
FaiI YATR 8 cut(s) 60, 62, 71, 113, 277, 332, 401, 411
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FatI CATG 1 cut(s) 69
FokI GGATG 3 cut(s) 107, 144, 212
FspBI CTAG 1 cut(s) 285
HaeIII GGCC 2 cut(s) 57, 490
HapII CCGG 2 cut(s) 393, 458
Hin1II CATG 1 cut(s) 73
HinfI GANTC 1 cut(s) 326
HpaII CCGG 2 cut(s) 393, 458
HphI GGTGA 2 cut(s) 160, 482
Hpy188I TCNGA 3 cut(s) 199, 298, 325
HpyAV CCTTC 5 cut(s) 47, 159, 239, 277, 464
HpyF10VI GCNNNNNNNGC 1 cut(s) 285
HpyF3I CTNAG 3 cut(s) 204, 357, 423
Hsp92II CATG 1 cut(s) 73
Kzo9I GATC 2 cut(s) 30, 318
LmnI GCTCC 3 cut(s) 4, 301, 375
LpnPI CCDG 6 cut(s) 65, 143, 198, 318, 406, 471
MaeI CTAG 1 cut(s) 285
MaeIII GTNAC 1 cut(s) 460
MalI GATC 2 cut(s) 32, 320
MboI GATC 2 cut(s) 30, 318
MboII GAAGA 3 cut(s) 80, 226, 471
MluCI AATT 1 cut(s) 9
MlyI GAGTC 1 cut(s) 320
MnlI CCTC 4 cut(s) 18, 199, 292, 501
MseI TTAA 3 cut(s) 366, 437, 485
MspA1I CMGCKG 1 cut(s) 79
MspCI CTTAAG 1 cut(s) 484
MspI CCGG 2 cut(s) 393, 458
MspR9I CCNGG 1 cut(s) 394
MvnI CGCG 1 cut(s) 504
MwoI GCNNNNNNNGC 1 cut(s) 285
NciI CCSGG 1 cut(s) 394
NdeII GATC 2 cut(s) 30, 318
NlaIII CATG 1 cut(s) 73
NlaIV GGNNCC 1 cut(s) 303
NmuCI GTSAC 1 cut(s) 460
PceI AGGCCT 1 cut(s) 490
PleI GAGTC 1 cut(s) 320
PpsI GAGTC 1 cut(s) 320
PspN4I GGNNCC 1 cut(s) 303
PvuII CAGCTG 1 cut(s) 79
SaqAI TTAA 3 cut(s) 366, 437, 485
Sau3AI GATC 2 cut(s) 30, 318
SchI GAGTC 1 cut(s) 320
ScrFI CCNGG 1 cut(s) 394
SetI ASST 8 cut(s) 29, 81, 173, 290, 365, 372, 456, 472
SfcI CTRYAG 1 cut(s) 74
SmlI CTYRAG 1 cut(s) 484
SmoI CTYRAG 1 cut(s) 484
Sse9I AATT 1 cut(s) 9
SseBI AGGCCT 1 cut(s) 490
SsiI CCGC 1 cut(s) 504
SspMI CTAG 1 cut(s) 285
StuI AGGCCT 1 cut(s) 490
StyD4I CCNGG 1 cut(s) 392
StyI CCWWGG 1 cut(s) 374
TasI AATT 1 cut(s) 9
Tru1I TTAA 3 cut(s) 366, 437, 485
Tru9I TTAA 3 cut(s) 366, 437, 485
TseFI GTSAC 1 cut(s) 460
Tsp45I GTSAC 1 cut(s) 460
Vha464I CTTAAG 1 cut(s) 484
XcmI CCANNNNNNNNNTGG 1 cut(s) 76
XspI CTAG 1 cut(s) 285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.