Rmu_co8456137.1_g000001

UDP-glycosyltransferase 76F1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8456137.1
OG0000232
Physical Location & Seq
Forward (+)
204 .. 1671
1468 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8456137.1_g000001.1.cds

Sequence Viewer

Length: 1293 bp
atgcttgagctcgccaatattctacactcgaaaggcttctccataaccataatccacaccagcttcaactctctcaacccttcgagccatccgcacttcaccttccactcgatccatgagggcttctctaaaagcggaaccttaaaggatactctccttgtcatttctagtctaaatgcaaagtgtcatgaacctttcaggggatgtttgactcggttgttgtctgatgtttcgaaggagcctgttgcttgcttaatcaccgactccgtctatgacttcactcaatctgttgcggagagcctaaagctaccaaggattctgttaagggcttggagtgcctcttcgtttgctatttatgctacatttccgcttcttcgagaaaaaggttacctcccaaaacaagattctcgactagaagaggaagtgacagagctttcacctttcaaggttaaagaccttccacttatcaacagtgatggtccagagagatattttaaaattatagccgacttggaagatcaaaccaaggcctcatgtggattgattcttaatacttttgaagaccttgatgaacatgcactggccacaattcgccagaattattctattccagttttctcactaggaccatttcacaaatgctaccccaactcttcttcaacctcaagtagcttattagcacaagaccagagttgcatttcatggttaaacagacaagctccaaaatctgttatttatgttagctttgggagtgtagcagcaataaacgaagctcagtttttggagatagcctggggcctggccaacagcaagcagcccttcttgtgggtggttcgacccggattagtccctgggtcagattggcttgaagcactacctagtgggtttcatgagaccttgaatggaaaggggcacattgttaaatgggcatctcaaaaagaggtgctttcccatcaagcgattggtgtgttttggactcataatggctggaattctacattggagagtatttgcgaggggatccctatgatttgtatgccatgttctgctgatcaaatgatgaatgcaagatatgtaagtgatgtttggaaagttgggttgcagttagaagatggagttgagagaggcaacattgaaaaaaccattagaaaactactggtggagaaagaaggggaagagatcaaagacagagtggtgaagctaatgcagaaggcaaatttttgcctcaaaccaggtggctcctcatatcaatccttagatgcattgatcaaacacattttatcattcaactag

Protein Analysis

430

Amino Acids

47.96

Weight (kDa)

6.28

Isoelectric Point (pI)

46.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 92, 135, 293, 368
AclWI GGATC 3 cut(s) 106, 1015, 1028
AcoI YGGCCR 2 cut(s) 582, 801
AcsI RAATTY 2 cut(s) 991, 1216
AfiI CCNNNNNNNGG 2 cut(s) 200, 825
AgsI TTSAA 8 cut(s) 67, 445, 560, 660, 869, 901, 1136, 1288
AjnI CCWGG 4 cut(s) 791, 798, 850, 1231
AjuI GAANNNNNNNTTGG 4 cut(s) 388, 420, 983, 1015
AluBI AGCT 9 cut(s) 10, 63, 307, 433, 672, 719, 744, 773, 1201
AluI AGCT 9 cut(s) 10, 63, 307, 433, 672, 719, 744, 773, 1201
Alw21I GWGCWC 1 cut(s) 12
Alw26I GTCTC 1 cut(s) 887
AlwI GGATC 3 cut(s) 106, 1015, 1028
AoxI GGCC 4 cut(s) 528, 582, 796, 801
ApeKI GCWGC 2 cut(s) 758, 814
ApoI RAATTY 2 cut(s) 991, 1216
Asp700I GAANNNNTTC 1 cut(s) 35
AspS9I GGNCC 3 cut(s) 479, 626, 796
AsuC2I CCSGG 1 cut(s) 840
AsuHPI GGTGA 4 cut(s) 91, 250, 429, 1207
AsuII TTCGAA 1 cut(s) 233
AvaII GGWCC 2 cut(s) 479, 626
BaeGI GKGCMC 1 cut(s) 915
BalI TGGCCA 2 cut(s) 584, 803
BamHI GGATCC 1 cut(s) 1020
BanII GRGCYC 1 cut(s) 12
BbsI GAAGAC 1 cut(s) 567
Bbv12I GWGCWC 1 cut(s) 12
BbvI GCAGC 2 cut(s) 770, 826
BccI CCATC 4 cut(s) 96, 470, 960, 1106
BciT130I CCWGG 4 cut(s) 793, 800, 852, 1233
BciVI GTATCC 1 cut(s) 142
BclI TGATCA 2 cut(s) 1051, 1266
BcnI CCSGG 1 cut(s) 840
BcoDI GTCTC 1 cut(s) 887
BfaI CTAG 5 cut(s) 168, 413, 623, 879, 1291
BfuI GTATCC 1 cut(s) 142
BisI GCNGC 2 cut(s) 759, 815
BlsI GCNGC 2 cut(s) 760, 816
Bme1390I CCNGG 5 cut(s) 793, 800, 840, 852, 1233
Bme18I GGWCC 2 cut(s) 479, 626
BmgT120I GGNCC 3 cut(s) 479, 626, 796
BmiI GGNNCC 5 cut(s) 139, 240, 797, 1022, 1240
BmrFI CCNGG 5 cut(s) 793, 800, 840, 852, 1233
BmsI GCATC 2 cut(s) 938, 1249
BpiI GAAGAC 1 cut(s) 567
BplI GAGNNNNNCTC 2 cut(s) 110, 142
Bpu14I TTCGAA 1 cut(s) 233
BpuEI CTTGAG 2 cut(s) 26, 649
BpuMI CCSGG 1 cut(s) 840
BsaI GGTCTC 1 cut(s) 887
BsaJI CCNNGG 5 cut(s) 311, 525, 792, 850, 851
Bsc4I CCNNNNNNNGG 2 cut(s) 200, 825
Bse1I ACTGG 3 cut(s) 585, 611, 1161
BseBI CCWGG 4 cut(s) 793, 800, 852, 1233
BseDI CCNNGG 5 cut(s) 311, 525, 792, 850, 851
BseGI GGATG 2 cut(s) 88, 209
BseLI CCNNNNNNNGG 2 cut(s) 200, 825
BseMII CTCAG 1 cut(s) 788
BseNI ACTGG 3 cut(s) 585, 611, 1161
BseRI GAGGAG 1 cut(s) 1231
BseSI GKGCMC 1 cut(s) 915
BseXI GCAGC 2 cut(s) 770, 826
BshFI GGCC 4 cut(s) 530, 584, 798, 803
BsiHKAI GWGCWC 1 cut(s) 12
BsiSI CCGG 1 cut(s) 840
BslFI GGGAC 1 cut(s) 833
BslI CCNNNNNNNGG 2 cut(s) 200, 825
BsmAI GTCTC 1 cut(s) 887
BsmFI GGGAC 1 cut(s) 833
BsmI GAATGC 1 cut(s) 1069
BsnI GGCC 4 cut(s) 530, 584, 798, 803
Bso31I GGTCTC 1 cut(s) 887
Bsp119I TTCGAA 1 cut(s) 233
Bsp1286I GDGCHC 2 cut(s) 12, 915
Bsp143I GATC 6 cut(s) 111, 517, 1020, 1051, 1179, 1266
BspACI CCGC 4 cut(s) 92, 135, 293, 368
BspANI GGCC 4 cut(s) 530, 584, 798, 803
BspCNI CTCAG 1 cut(s) 787
BspHI TCATGA 2 cut(s) 187, 889
BspLI GGNNCC 5 cut(s) 139, 240, 797, 1022, 1240
BspPI GGATC 3 cut(s) 106, 1015, 1028
BspT104I TTCGAA 1 cut(s) 233
BspTNI GGTCTC 1 cut(s) 887
BsrI ACTGG 3 cut(s) 585, 611, 1161
BssECI CCNNGG 5 cut(s) 311, 525, 792, 850, 851
BssMI GATC 6 cut(s) 111, 517, 1020, 1051, 1179, 1266
BssT1I CCWWGG 2 cut(s) 311, 525
Bst2UI CCWGG 4 cut(s) 793, 800, 852, 1233
Bst4CI ACNGT 1 cut(s) 473
Bst6I CTCTTC 4 cut(s) 346, 411, 658, 1170
BstBI TTCGAA 1 cut(s) 233
BstC8I GCNNGC 3 cut(s) 12, 250, 812
BstDEI CTNAG 2 cut(s) 774, 1255
BstEII GGTNACC 1 cut(s) 386
BstF5I GGATG 2 cut(s) 88, 209
BstKTI GATC 6 cut(s) 114, 520, 1023, 1054, 1182, 1269
BstMAI GTCTC 1 cut(s) 887
BstMBI GATC 6 cut(s) 111, 517, 1020, 1051, 1179, 1266
BstMWI GCNNNNNNNGC 2 cut(s) 335, 356
BstNI CCWGG 4 cut(s) 793, 800, 852, 1233
BstNSI RCATGY 1 cut(s) 578
BstPI GGTNACC 1 cut(s) 386
BstSCI CCNGG 5 cut(s) 791, 798, 838, 850, 1231
BstSLI GKGCMC 1 cut(s) 915
BstV1I GCAGC 2 cut(s) 770, 826
BstV2I GAAGAC 1 cut(s) 567
BstX2I RGATCY 1 cut(s) 1020
BstYI RGATCY 1 cut(s) 1020
BsuI GTATCC 1 cut(s) 142
BsuRI GGCC 4 cut(s) 530, 584, 798, 803
BtsCI GGATG 2 cut(s) 88, 209
BtsIMutI CAGTG 2 cut(s) 478, 578
Cac8I GCNNGC 3 cut(s) 12, 250, 812
CciI TCATGA 2 cut(s) 187, 889
Cfr13I GGNCC 3 cut(s) 479, 626, 796
CsiI ACCWGGT 1 cut(s) 1231
CspCI CAANNNNNGTGG 2 cut(s) 1216, 1251
CviAII CATG 7 cut(s) 116, 188, 534, 575, 702, 890, 1041
DdeI CTNAG 2 cut(s) 774, 1255
DpnI GATC 6 cut(s) 113, 519, 1022, 1053, 1181, 1268
DpnII GATC 6 cut(s) 111, 517, 1020, 1051, 1179, 1266
DraI TTTAAA 1 cut(s) 496
EaeI YGGCCR 2 cut(s) 582, 801
Eam1104I CTCTTC 4 cut(s) 346, 411, 658, 1170
EarI CTCTTC 4 cut(s) 346, 411, 658, 1170
Ecl136II GAGCTC 1 cut(s) 10
Eco130I CCWWGG 2 cut(s) 311, 525
Eco147I AGGCCT 1 cut(s) 530
Eco24I GRGCYC 1 cut(s) 12
Eco31I GGTCTC 1 cut(s) 887
Eco47I GGWCC 2 cut(s) 479, 626
Eco53kI GAGCTC 1 cut(s) 10
Eco91I GGTNACC 1 cut(s) 386
EcoICRI GAGCTC 1 cut(s) 10
EcoO109I RGGNCCY 1 cut(s) 796
EcoO65I GGTNACC 1 cut(s) 386
EcoRI GAATTC 1 cut(s) 991
EcoRII CCWGG 4 cut(s) 791, 798, 850, 1231
EcoT14I CCWWGG 2 cut(s) 311, 525
EcoT22I ATGCAT 1 cut(s) 1264
EcoT38I GRGCYC 1 cut(s) 12
ErhI CCWWGG 2 cut(s) 311, 525
FaeI CATG 7 cut(s) 119, 191, 537, 578, 705, 893, 1044
FalI AAGNNNNNCTT 4 cut(s) 803, 835, 930, 962
FaqI GGGAC 1 cut(s) 833
FatI CATG 7 cut(s) 115, 187, 533, 574, 701, 889, 1040
FbaI TGATCA 2 cut(s) 1051, 1266
Fnu4HI GCNGC 2 cut(s) 759, 815
FokI GGATG 2 cut(s) 75, 216
FriOI GRGCYC 1 cut(s) 12
Fsp4HI GCNGC 2 cut(s) 759, 815
FspBI CTAG 5 cut(s) 168, 413, 623, 879, 1291
GluI GCNGC 2 cut(s) 759, 815
HaeIII GGCC 4 cut(s) 530, 584, 798, 803
HapII CCGG 1 cut(s) 840
Hin1II CATG 7 cut(s) 119, 191, 537, 578, 705, 893, 1044
HinfI GANTC 6 cut(s) 211, 263, 316, 404, 544, 976
HpaII CCGG 1 cut(s) 840
HphI GGTGA 4 cut(s) 91, 250, 429, 1207
Hpy188I TCNGA 2 cut(s) 226, 859
Hpy188III TCNNGA 5 cut(s) 188, 377, 408, 482, 890
HpyAV CCTTC 7 cut(s) 90, 112, 229, 467, 829, 1163, 1204
HpyCH4III ACNGT 1 cut(s) 473
HpyCH4V TGCA 7 cut(s) 179, 578, 696, 1067, 1102, 1207, 1262
HpyF10VI GCNNNNNNNGC 2 cut(s) 335, 356
HpyF3I CTNAG 2 cut(s) 774, 1255
Hsp92II CATG 7 cut(s) 119, 191, 537, 578, 705, 893, 1044
Ksp22I TGATCA 2 cut(s) 1051, 1266
Kzo9I GATC 6 cut(s) 111, 517, 1020, 1051, 1179, 1266
LmnI GCTCC 3 cut(s) 238, 724, 1244
Lsp1109I GCAGC 2 cut(s) 770, 826
LweI GCATC 2 cut(s) 938, 1249
MabI ACCWGGT 1 cut(s) 1231
MaeI CTAG 5 cut(s) 168, 413, 623, 879, 1291
MaeIII GTNAC 2 cut(s) 386, 424
MalI GATC 6 cut(s) 113, 519, 1022, 1053, 1181, 1268
MboI GATC 6 cut(s) 111, 517, 1020, 1051, 1179, 1266
MboII GAAGA 9 cut(s) 333, 365, 428, 527, 572, 645, 648, 1121, 1187
MflI RGATCY 1 cut(s) 1020
MhlI GDGCHC 2 cut(s) 12, 915
MlsI TGGCCA 2 cut(s) 584, 803
MluCI AATT 5 cut(s) 498, 588, 598, 991, 1216
MluNI TGGCCA 2 cut(s) 584, 803
MlyI GAGTC 3 cut(s) 205, 257, 970
Mox20I TGGCCA 2 cut(s) 584, 803
Mph1103I ATGCAT 1 cut(s) 1264
MroXI GAANNNNTTC 1 cut(s) 35
MscI TGGCCA 2 cut(s) 584, 803
MseI TTAA 8 cut(s) 143, 254, 323, 450, 495, 549, 707, 921
Msp20I TGGCCA 2 cut(s) 584, 803
MspI CCGG 1 cut(s) 840
MspR9I CCNGG 5 cut(s) 793, 800, 840, 852, 1233
Mva1269I GAATGC 1 cut(s) 1069
MvaI CCWGG 4 cut(s) 793, 800, 852, 1233
MwoI GCNNNNNNNGC 2 cut(s) 335, 356
NciI CCSGG 1 cut(s) 840
NdeII GATC 6 cut(s) 111, 517, 1020, 1051, 1179, 1266
NlaIII CATG 7 cut(s) 119, 191, 537, 578, 705, 893, 1044
NlaIV GGNNCC 5 cut(s) 139, 240, 797, 1022, 1240
NmuCI GTSAC 1 cut(s) 424
NsiI ATGCAT 1 cut(s) 1264
NspI RCATGY 1 cut(s) 578
NspV TTCGAA 1 cut(s) 233
PagI TCATGA 2 cut(s) 187, 889
PasI CCCWGGG 1 cut(s) 851
PceI AGGCCT 1 cut(s) 530
PctI GAATGC 1 cut(s) 1069
PdmI GAANNNNTTC 1 cut(s) 35
PfeI GAWTC 3 cut(s) 316, 404, 544
PflFI GACNNNGTC 1 cut(s) 266
PkrI GCNGC 2 cut(s) 760, 816
PleI GAGTC 3 cut(s) 205, 257, 970
PpsI GAGTC 3 cut(s) 205, 257, 970
Psp124BI GAGCTC 1 cut(s) 12
Psp6I CCWGG 4 cut(s) 791, 798, 850, 1231
PspEI GGTNACC 1 cut(s) 386
PspGI CCWGG 4 cut(s) 791, 798, 850, 1231
PspN4I GGNNCC 5 cut(s) 139, 240, 797, 1022, 1240
PspPI GGNCC 3 cut(s) 479, 626, 796
PsrI GAACNNNNNNTAC 2 cut(s) 1027, 1059
PsuI RGATCY 1 cut(s) 1020
PsyI GACNNNGTC 1 cut(s) 266
SacI GAGCTC 1 cut(s) 12
SaqAI TTAA 8 cut(s) 143, 254, 323, 450, 495, 549, 707, 921
SatI GCNGC 2 cut(s) 759, 815
Sau3AI GATC 6 cut(s) 111, 517, 1020, 1051, 1179, 1266
Sau96I GGNCC 3 cut(s) 479, 626, 796
SchI GAGTC 3 cut(s) 205, 257, 970
ScrFI CCNGG 5 cut(s) 793, 800, 840, 852, 1233
SduI GDGCHC 2 cut(s) 12, 915
SexAI ACCWGGT 1 cut(s) 1231
SfaNI GCATC 2 cut(s) 938, 1249
SfuI TTCGAA 1 cut(s) 233
SinI GGWCC 2 cut(s) 479, 626
SmlI CTYRAG 2 cut(s) 5, 664
SmoI CTYRAG 2 cut(s) 5, 664
Sse9I AATT 5 cut(s) 498, 588, 598, 991, 1216
SseBI AGGCCT 1 cut(s) 530
SsiI CCGC 4 cut(s) 92, 135, 293, 368
SspI AATATT 1 cut(s) 19
SspMI CTAG 5 cut(s) 168, 413, 623, 879, 1291
SstI GAGCTC 1 cut(s) 12
StuI AGGCCT 1 cut(s) 530
StyD4I CCNGG 5 cut(s) 791, 798, 838, 850, 1231
StyI CCWWGG 2 cut(s) 311, 525
TaaI ACNGT 1 cut(s) 473
TaqI TCGA 7 cut(s) 29, 83, 110, 233, 376, 409, 835
TasI AATT 5 cut(s) 498, 588, 598, 991, 1216
TfiI GAWTC 3 cut(s) 316, 404, 544
Tru1I TTAA 8 cut(s) 143, 254, 323, 450, 495, 549, 707, 921
Tru9I TTAA 8 cut(s) 143, 254, 323, 450, 495, 549, 707, 921
TscAI CASTG 2 cut(s) 478, 585
TseFI GTSAC 1 cut(s) 424
TseI GCWGC 2 cut(s) 758, 814
Tsp45I GTSAC 1 cut(s) 424
TspDTI ATGAA 5 cut(s) 204, 585, 690, 878, 1076
TspGWI ACGGA 1 cut(s) 256
TspRI CASTG 2 cut(s) 478, 585
Tth111I GACNNNGTC 1 cut(s) 266
VpaK11BI GGWCC 2 cut(s) 479, 626
XapI RAATTY 2 cut(s) 991, 1216
XceI RCATGY 1 cut(s) 578
XcmI CCANNNNNNNNNTGG 1 cut(s) 959
XmnI GAANNNNTTC 1 cut(s) 35
XspI CTAG 5 cut(s) 168, 413, 623, 879, 1291
Zsp2I ATGCAT 1 cut(s) 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.