Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000232

Physical Location & Seq

Genomic Coordinates Forward (+)

25243331 .. 25244338

Gene Structure 1008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1142700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 648 bp

ATGTTAGAGACCGTGTGCGCCACTACCTTGGTTGTTTATGCTGCTTTTCCTCTTCTCAAAGAAAAAGGATACTTTCCAATACAAGATTCTCGACTAAAAGAGCTAGTGACAGAATTGTCACCTACCAAAGTTAAAGACCTGCCAACGAATCCCAATTGCGATCCTGAGAAACTTTATCAACTGGTCGTCGACGTGGCAAATGAACTGAAGTCTTCTTATGGACTCATCTTAAATACATTTGAAGATCTTGAAGGACATGCTCTAGCCACGATCCGCCAAGAACACCTGCCCAATGTTCCCATTTTCCCAGTAGGTCCGTTTCACAAGTGTTGCCTTACAGTATCCTCTTCAAGTAGTTTATTGACACAAGACCAGAGTTGCATTTCATGGCTGAACACTCAAGCGCCAACAGTGGCCAATCCTTTTTCTTACATTGTGAAATGGACTCCACAAAAAGAAGTGCTGGCCCACCTGGCAGTCGGAGCCTTTTCGACTCACAATGGTTGGAATTCTACATTGGAAAGCATTAGTGAGGGGATCCCTATGATTTGCACGCCATTTTTTGGTGAACAAATGGTGAATGCAAGAAATGTGAGGGATGTTTGGAAGATAGGGCTCTTAAATCACTACTACAAAAGGGCCCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0047254 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204

Pfam Domains

Protein Families

UDPGT

Protein Analysis

216

Amino Acids

24.03

Weight (kDa)

6.06

Isoelectric Point (pI)

43.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	130 - 208	3.4e-22	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55700 AT3G55710
fragaria_vesca	FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica	MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica	Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis	pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis	RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata	RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora	Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii	Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa	Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha	Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana	Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	294
AasI	GACNNNNNNGTC	1 cut(s)	115
Acc36I	ACCTGC	2 cut(s)	147, 294
AccB7I	CCANNNNNTGG	1 cut(s)	563
AccI	GTMKAC	1 cut(s)	189
AciI	CCGC	1 cut(s)	274
AclWI	GGATC	4 cut(s)	155, 265, 532, 545
AcoI	YGGCCR	1 cut(s)	414
AcsI	RAATTY	1 cut(s)	508
AcuI	CTGAAG	1 cut(s)	227
AfiI	CCNNNNNNNGG	1 cut(s)	563
AgsI	TTSAA	3 cut(s)	242, 251, 351
AjiI	CACGTC	1 cut(s)	193
AjnI	CCWGG	1 cut(s)	471
AjuI	GAANNNNNNNTTGG	4 cut(s)	70, 102, 500, 532
AluBI	AGCT	1 cut(s)	103
AluI	AGCT	1 cut(s)	103
Alw26I	GTCTC	1 cut(s)	2
AlwI	GGATC	4 cut(s)	155, 265, 532, 545
AoxI	GGCC	3 cut(s)	414, 465, 639
ApaI	GGGCCC	1 cut(s)	643
ApeKI	GCWGC	1 cut(s)	41
ApoI	RAATTY	1 cut(s)	508
AspLEI	GCGC	2 cut(s)	20, 406
AspS9I	GGNCC	4 cut(s)	314, 466, 639, 640
AsuHPI	GGTGA	3 cut(s)	111, 578, 589
AvaII	GGWCC	1 cut(s)	314
BaeGI	GKGCMC	1 cut(s)	643
BalI	TGGCCA	1 cut(s)	416
BamHI	GGATCC	1 cut(s)	537
BanII	GRGCYC	2 cut(s)	618, 643
BbsI	GAAGAC	1 cut(s)	204
BbvI	GCAGC	1 cut(s)	28
BciT130I	CCWGG	1 cut(s)	473
BciVI	GTATCC	2 cut(s)	62, 352
BcoDI	GTCTC	1 cut(s)	2
BfaI	CTAG	2 cut(s)	104, 263
BfmI	CTRYAG	1 cut(s)	644
BfoI	RGCGCY	1 cut(s)	407
BfuAI	ACCTGC	2 cut(s)	147, 294
BfuI	GTATCC	2 cut(s)	62, 352
BglI	GCCNNNNNGGC	1 cut(s)	473
BglII	AGATCT	1 cut(s)	244
BisI	GCNGC	1 cut(s)	42
BlsI	GCNGC	1 cut(s)	43
Bme1390I	CCNGG	1 cut(s)	473
Bme18I	GGWCC	1 cut(s)	314
BmgBI	CACGTC	1 cut(s)	193
BmgT120I	GGNCC	4 cut(s)	314, 466, 639, 640
BmiI	GGNNCC	3 cut(s)	484, 539, 641
BmrFI	CCNGG	1 cut(s)	473
BmrI	ACTGGG	1 cut(s)	302
BmuI	ACTGGG	1 cut(s)	302
BpiI	GAAGAC	1 cut(s)	204
BpuEI	CTTGAG	1 cut(s)	384
BsaI	GGTCTC	1 cut(s)	2
BsaJI	CCNNGG	1 cut(s)	27
Bsc4I	CCNNNNNNNGG	1 cut(s)	563
Bse1I	ACTGG	2 cut(s)	186, 308
BseBI	CCWGG	1 cut(s)	473
BseDI	CCNNGG	1 cut(s)	27
BseGI	GGATG	1 cut(s)	604
BseLI	CCNNNNNNNGG	1 cut(s)	563
BseMII	CTCAG	1 cut(s)	156
BseNI	ACTGG	2 cut(s)	186, 308
BseSI	GKGCMC	1 cut(s)	643
BseXI	GCAGC	1 cut(s)	28
BshFI	GGCC	3 cut(s)	416, 467, 641
BslI	CCNNNNNNNGG	1 cut(s)	563
BsmAI	GTCTC	1 cut(s)	2
BsmI	GAATGC	1 cut(s)	586
BsnI	GGCC	3 cut(s)	416, 467, 641
Bso31I	GGTCTC	1 cut(s)	2
Bsp120I	GGGCCC	1 cut(s)	639
Bsp1286I	GDGCHC	2 cut(s)	618, 643
Bsp143I	GATC	4 cut(s)	160, 244, 270, 537
BspACI	CCGC	1 cut(s)	274
BspANI	GGCC	3 cut(s)	416, 467, 641
BspCNI	CTCAG	1 cut(s)	157
BspLI	GGNNCC	3 cut(s)	484, 539, 641
BspMI	ACCTGC	2 cut(s)	147, 294
BspPI	GGATC	4 cut(s)	155, 265, 532, 545
BspTNI	GGTCTC	1 cut(s)	2
BsrI	ACTGG	2 cut(s)	186, 308
BssECI	CCNNGG	1 cut(s)	27
BssMI	GATC	4 cut(s)	160, 244, 270, 537
BssT1I	CCWWGG	1 cut(s)	27
Bst2UI	CCWGG	1 cut(s)	473
Bst4CI	ACNGT	3 cut(s)	13, 340, 412
Bst6I	CTCTTC	2 cut(s)	57, 352
BstC8I	GCNNGC	2 cut(s)	465, 554
BstDEI	CTNAG	1 cut(s)	165
BstF5I	GGATG	1 cut(s)	604
BstH2I	RGCGCY	1 cut(s)	407
BstHHI	GCGC	2 cut(s)	20, 406
BstKTI	GATC	4 cut(s)	163, 247, 273, 540
BstMAI	GTCTC	1 cut(s)	2
BstMBI	GATC	4 cut(s)	160, 244, 270, 537
BstMWI	GCNNNNNNNGC	2 cut(s)	473, 482
BstNI	CCWGG	1 cut(s)	473
BstNSI	RCATGY	1 cut(s)	260
BstSCI	CCNGG	1 cut(s)	471
BstSFI	CTRYAG	1 cut(s)	644
BstSLI	GKGCMC	1 cut(s)	643
BstV1I	GCAGC	1 cut(s)	28
BstV2I	GAAGAC	1 cut(s)	204
BstX2I	RGATCY	2 cut(s)	244, 537
BstXI	CCANNNNNNTGG	1 cut(s)	28
BstYI	RGATCY	2 cut(s)	244, 537
BsuI	GTATCC	2 cut(s)	62, 352
BsuRI	GGCC	3 cut(s)	416, 467, 641
BtrI	CACGTC	1 cut(s)	193
BtsCI	GGATG	1 cut(s)	604
BtsIMutI	CAGTG	1 cut(s)	417
BveI	ACCTGC	2 cut(s)	147, 294
Cac8I	GCNNGC	2 cut(s)	465, 554
CfoI	GCGC	2 cut(s)	20, 406
Cfr13I	GGNCC	4 cut(s)	314, 466, 639, 640
CviAII	CATG	2 cut(s)	257, 387
CviJI	RGCY	8 cut(s)	103, 266, 391, 416, 467, 485, 616, 641
CviKI_1	RGCY	8 cut(s)	103, 266, 391, 416, 467, 485, 616, 641
DdeI	CTNAG	1 cut(s)	165
DpnI	GATC	4 cut(s)	162, 246, 272, 539
DpnII	GATC	4 cut(s)	160, 244, 270, 537
DrdI	GACNNNNNNGTC	1 cut(s)	115
DseDI	GACNNNNNNGTC	1 cut(s)	115
EaeI	YGGCCR	1 cut(s)	414
Eam1104I	CTCTTC	2 cut(s)	57, 352
EarI	CTCTTC	2 cut(s)	57, 352
EciI	GGCGGA	1 cut(s)	263
Eco130I	CCWWGG	1 cut(s)	27
Eco24I	GRGCYC	2 cut(s)	618, 643
Eco31I	GGTCTC	1 cut(s)	2
Eco47I	GGWCC	1 cut(s)	314
Eco57I	CTGAAG	1 cut(s)	227
EcoO109I	RGGNCCY	2 cut(s)	639, 640
EcoRI	GAATTC	1 cut(s)	508
EcoRII	CCWGG	1 cut(s)	471
EcoT14I	CCWWGG	1 cut(s)	27
EcoT38I	GRGCYC	2 cut(s)	618, 643
ErhI	CCWWGG	1 cut(s)	27
FaeI	CATG	2 cut(s)	260, 390
FaiI	YATR	6 cut(s)	39, 219, 258, 388, 545, 646
FatI	CATG	2 cut(s)	256, 386
FblI	GTMKAC	1 cut(s)	189
Fnu4HI	GCNGC	1 cut(s)	42
FokI	GGATG	1 cut(s)	611
FriOI	GRGCYC	2 cut(s)	618, 643
Fsp4HI	GCNGC	1 cut(s)	42
FspBI	CTAG	2 cut(s)	104, 263
GlaI	GCGC	2 cut(s)	19, 405
GluI	GCNGC	1 cut(s)	42
HaeII	RGCGCY	1 cut(s)	407
HaeIII	GGCC	3 cut(s)	416, 467, 641
HhaI	GCGC	2 cut(s)	20, 406
Hin1II	CATG	2 cut(s)	260, 390
Hin6I	GCGC	2 cut(s)	18, 404
HinP1I	GCGC	2 cut(s)	18, 404
HincII	GTYRAC	1 cut(s)	190
HindII	GTYRAC	1 cut(s)	190
HinfI	GANTC	5 cut(s)	86, 148, 222, 445, 493
HphI	GGTGA	3 cut(s)	111, 578, 589
Hpy166II	GTNNAC	2 cut(s)	190, 569
Hpy188I	TCNGA	1 cut(s)	482
Hpy188III	TCNNGA	3 cut(s)	90, 164, 248
Hpy8I	GTNNAC	2 cut(s)	190, 569
Hpy99I	CGWCG	2 cut(s)	191, 194
HpyAV	CCTTC	1 cut(s)	245
HpyCH4III	ACNGT	3 cut(s)	13, 340, 412
HpyCH4IV	ACGT	1 cut(s)	192
HpyCH4V	TGCA	3 cut(s)	381, 552, 584
HpyF10VI	GCNNNNNNNGC	2 cut(s)	473, 482
HpyF3I	CTNAG	1 cut(s)	165
HpySE526I	ACGT	1 cut(s)	192
Hsp92II	CATG	2 cut(s)	260, 390
HspAI	GCGC	2 cut(s)	18, 404
Kzo9I	GATC	4 cut(s)	160, 244, 270, 537
LmnI	GCTCC	1 cut(s)	482
LpnPI	CCDG	9 cut(s)	152, 167, 177, 299, 321, 386, 449, 458, 485
Lsp1109I	GCAGC	1 cut(s)	28
MaeI	CTAG	2 cut(s)	104, 263
MaeII	ACGT	1 cut(s)	192
MaeIII	GTNAC	2 cut(s)	106, 117
MalI	GATC	4 cut(s)	162, 246, 272, 539
MboI	GATC	4 cut(s)	160, 244, 270, 537
MboII	GAAGA	5 cut(s)	44, 204, 254, 339, 619
MfeI	CAATTG	1 cut(s)	154
MflI	RGATCY	2 cut(s)	244, 537
MhlI	GDGCHC	2 cut(s)	618, 643
MlsI	TGGCCA	1 cut(s)	416
MluCI	AATT	3 cut(s)	113, 154, 508
MluNI	TGGCCA	1 cut(s)	416
MlyI	GAGTC	3 cut(s)	216, 439, 487
MmeI	TCCRAC	2 cut(s)	460, 485
MnlI	CCTC	4 cut(s)	60, 355, 526, 588
Mox20I	TGGCCA	1 cut(s)	416
MscI	TGGCCA	1 cut(s)	416
MseI	TTAA	3 cut(s)	132, 230, 620
Msp20I	TGGCCA	1 cut(s)	416
MspR9I	CCNGG	1 cut(s)	473
MunI	CAATTG	1 cut(s)	154
Mva1269I	GAATGC	1 cut(s)	586
MvaI	CCWGG	1 cut(s)	473
MwoI	GCNNNNNNNGC	2 cut(s)	473, 482
NdeII	GATC	4 cut(s)	160, 244, 270, 537
NlaIII	CATG	2 cut(s)	260, 390
NlaIV	GGNNCC	3 cut(s)	484, 539, 641
NmuCI	GTSAC	2 cut(s)	106, 117
NspI	RCATGY	1 cut(s)	260
PaqCI	CACCTGC	1 cut(s)	294
PctI	GAATGC	1 cut(s)	586
PfeI	GAWTC	2 cut(s)	86, 148
PflMI	CCANNNNNTGG	1 cut(s)	563
PkrI	GCNGC	1 cut(s)	43
PleI	GAGTC	3 cut(s)	216, 439, 487
PpsI	GAGTC	3 cut(s)	216, 439, 487
Psp6I	CCWGG	1 cut(s)	471
PspGI	CCWGG	1 cut(s)	471
PspN4I	GGNNCC	3 cut(s)	484, 539, 641
PspOMI	GGGCCC	1 cut(s)	639
PspPI	GGNCC	4 cut(s)	314, 466, 639, 640
PsuI	RGATCY	2 cut(s)	244, 537
SalI	GTCGAC	1 cut(s)	188
SaqAI	TTAA	3 cut(s)	132, 230, 620
SatI	GCNGC	1 cut(s)	42
Sau3AI	GATC	4 cut(s)	160, 244, 270, 537
Sau96I	GGNCC	4 cut(s)	314, 466, 639, 640
SchI	GAGTC	3 cut(s)	216, 439, 487
ScrFI	CCNGG	1 cut(s)	473
SduI	GDGCHC	2 cut(s)	618, 643
SetI	ASST	8 cut(s)	29, 105, 124, 141, 195, 288, 316, 474
SfcI	CTRYAG	1 cut(s)	644
SgrDI	CGTCGACG	1 cut(s)	188
SinI	GGWCC	1 cut(s)	314
SmlI	CTYRAG	1 cut(s)	399
SmoI	CTYRAG	1 cut(s)	399
Sse9I	AATT	3 cut(s)	113, 154, 508
SsiI	CCGC	1 cut(s)	274
SspMI	CTAG	2 cut(s)	104, 263
StyD4I	CCNGG	1 cut(s)	471
StyI	CCWWGG	1 cut(s)	27
TaaI	ACNGT	3 cut(s)	13, 340, 412
TaiI	ACGT	1 cut(s)	195
TaqI	TCGA	3 cut(s)	91, 189, 491
TasI	AATT	3 cut(s)	113, 154, 508
TfiI	GAWTC	2 cut(s)	86, 148
Tru1I	TTAA	3 cut(s)	132, 230, 620
Tru9I	TTAA	3 cut(s)	132, 230, 620
TscAI	CASTG	1 cut(s)	417
TseFI	GTSAC	2 cut(s)	106, 117
TseI	GCWGC	1 cut(s)	41
Tsp45I	GTSAC	2 cut(s)	106, 117
TspDTI	ATGAA	2 cut(s)	216, 375
TspGWI	ACGGA	1 cut(s)	306
TspRI	CASTG	1 cut(s)	417
Van91I	CCANNNNNTGG	1 cut(s)	563
VpaK11BI	GGWCC	1 cut(s)	314
XapI	RAATTY	1 cut(s)	508
XceI	RCATGY	1 cut(s)	260
XmiI	GTMKAC	1 cut(s)	189
XspI	CTAG	2 cut(s)	104, 263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.