pycom01g16330

UDP-glycosyltransferase 76F1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
15945487 .. 15945717
231 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g16330.1

Sequence Viewer

Length: 231 bp
ATGGAGCAAAAAAAAGGCAGGAGAGTCATCCTCTTCCCACTGCCCTTCCAAGGGCACATAAACCCTACGCTAGAACTGGCCAACATTCTGCATTCCAAGGGCTTCTCCATAGCCATCATCTACACCAACTTCAACTCCCTCAATCCTTCAACCCTAAACCCACACTTCACCTACCATTCAATCCCTGTTGACTTCACAGAAAACGAAGCCTCCATCAAGACGATCGAGTAA

Protein Analysis

77

Amino Acids

8.65

Weight (kDa)

6.91

Isoelectric Point (pI)

44.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000232)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G55700 AT3G55710
fragaria_vesca FvH4_3g11390 FvH4_3g11390 FvH4_5g04400 FvH4_7g23660 FvH4_7g23661 FvH4_7g23670 FvH4_7g23671 FvH4_7g23680 FvH4_7g23690 FvH4_7g23700
malus_domestica MD01G1142600.v1.1 MD01G1142700.v1.1 MD01G1142800.v1.1 MD01G1143000.v1.1 MD01G1143100.v1.1 MD01G1143200.v1.1 MD01G1143400.v1.1 MD01G1143500.v1.1 MD01G1143600.v1.1 MD01G1144000.v1.1 MD01G1144100.v1.1 MD01G1148700.v1.1 MD03G1245400.v1.1 MD03G1245800.v1.1 MD07G1208300.v1.1 MD07G1208400.v1.1 MD07G1208800.v1.1 MD07G1208900.v1.1 MD07G1209000.v1.1 MD07G1209100.v1.1 MD07G1209300.v1.1 MD07G1209400.v1.1 MD07G1210300.v1.1
prunus_persica Prupe.2G243500_v2.0.a1 Prupe.2G243600_v2.0.a1 Prupe.4G159100_v2.0.a1 Prupe.4G159400_v2.0.a1
pyrus_communis pycom01g16270 pycom01g16280 pycom01g16290 pycom01g16300 pycom01g16310 pycom01g16330 pycom01g16340 pycom01g16350 pycom01g16360 pycom01g16370 pycom07g19390 pycom07g19400 pycom07g19410
rosa_chinensis RchiOBHm_Chr1g0344701 RchiOBHm_Chr1g0368931 RchiOBHm_Chr1g0368951 RchiOBHm_Chr1g0368971 RchiOBHm_Chr1g0368981 RchiOBHm_Chr5g0008431 RchiOBHm_Chr5g0008941
rosa_laevigata RLG00000004142 RLG00000027167 RLG00000027168 RLG00000027169 RLG00000027170 RLG00000027172 RLG00000027173 RLG00000027175 RLG00000031348 RLG00000031349 RLG00000031353 RLG00000031354 RLG00000031388 RLG00000031571
rosa_multiflora Rmu_co8456137.1_g000001 Rmu_sc0004250.1_g000034 Rmu_sc0004250.1_g000035 Rmu_sc0004250.1_g000040 Rmu_sc0004250.1_g000042 Rmu_sc0004988.1_g000012 Rmu_sc0004988.1_g000016 Rmu_ssc0000167.1_g000011
rosa_roxburghii Rroxscaffold_1G00068060 Rroxscaffold_1G00068070 Rroxscaffold_3G00260740 Rroxscaffold_4G00288110 Rroxscaffold_4G00288120 Rroxscaffold_4G00288130 Rroxscaffold_4G00288150 Rroxscaffold_4G00288170 Rroxscaffold_4G00288190
rosa_rugosa Rorug01G0346000 Rorug01G0346100 Rorug01G0346100 Rorug01G0346300 Rorug01G0346400 Rorug01G0346500 Rorug01G0346600 Rorug01G0346700 Rorug04G0435700 Rorug04G0435800 Rorug07G0021000 Rorug07G0021100 Rorug07G0021400 Rorug07G0021400
rosa_samantha Rh1AG192100 Rh1AG352900 Rh1AG353000 Rh1AG353100 Rh1AG353200 Rh1AG353300 Rh1AG353400 Rh1AG353600 Rh1BG316400 Rh1BG316500 Rh1BG316600 Rh1BG316800 Rh1BG316900 Rh1BG317000 Rh1CG177300 Rh1CG331100 Rh1CG331300 Rh1CG331500 Rh1CG331600 Rh5AG410000 Rh5BG061600 Rh5BG423900 Rh5DG438400 Rh7AG148500 Rh7BG149400 Rh7BG149600 Rh7CG153000
rosa_wichuraiana Rw1G015780 Rw1G031160 Rw1G031180 Rw1G031190 Rw1G031200 Rw1G031210 Rw1G031220 Rw1G031240 Rw5G005640 Rw5G038610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 78
AfiI CCNNNNNNNGG 2 cut(s) 50, 51
AgsI TTSAA 3 cut(s) 133, 150, 180
AoxI GGCC 1 cut(s) 78
AsuHPI GGTGA 1 cut(s) 160
BaeGI GKGCMC 1 cut(s) 57
BalI TGGCCA 1 cut(s) 80
BccI CCATC 2 cut(s) 122, 221
BfaI CTAG 1 cut(s) 71
BplI GAGNNNNNCTC 2 cut(s) 15, 47
BsaJI CCNNGG 2 cut(s) 49, 96
BsaXI ACNNNNNCTCC 4 cut(s) 119, 149, 194, 224
Bsc4I CCNNNNNNNGG 2 cut(s) 50, 51
Bse1I ACTGG 1 cut(s) 81
BseDI CCNNGG 2 cut(s) 49, 96
BseGI GGATG 1 cut(s) 27
BseLI CCNNNNNNNGG 2 cut(s) 50, 51
BseNI ACTGG 1 cut(s) 81
BseSI GKGCMC 1 cut(s) 57
Bsh1285I CGRYCG 1 cut(s) 225
BshFI GGCC 1 cut(s) 80
BsiEI CGRYCG 1 cut(s) 225
BslI CCNNNNNNNGG 2 cut(s) 50, 51
BsmI GAATGC 1 cut(s) 91
BsnI GGCC 1 cut(s) 80
Bsp1286I GDGCHC 1 cut(s) 57
Bsp143I GATC 1 cut(s) 222
BspANI GGCC 1 cut(s) 80
BsrI ACTGG 1 cut(s) 81
BssECI CCNNGG 2 cut(s) 49, 96
BssMI GATC 1 cut(s) 222
BssT1I CCWWGG 2 cut(s) 49, 96
Bst6I CTCTTC 1 cut(s) 38
BstF5I GGATG 1 cut(s) 27
BstKTI GATC 1 cut(s) 225
BstMBI GATC 1 cut(s) 222
BstMCI CGRYCG 1 cut(s) 225
BstSLI GKGCMC 1 cut(s) 57
BsuRI GGCC 1 cut(s) 80
BtsCI GGATG 1 cut(s) 27
BtsI GCAGTG 1 cut(s) 38
BtsIMutI CAGTG 1 cut(s) 38
CviJI RGCY 4 cut(s) 80, 102, 113, 209
CviKI_1 RGCY 4 cut(s) 80, 102, 113, 209
DpnI GATC 1 cut(s) 224
DpnII GATC 1 cut(s) 222
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
Eco130I CCWWGG 2 cut(s) 49, 96
EcoT14I CCWWGG 2 cut(s) 49, 96
ErhI CCWWGG 2 cut(s) 49, 96
FaiI YATR 2 cut(s) 59, 110
FokI GGATG 1 cut(s) 14
FspBI CTAG 1 cut(s) 71
HaeIII GGCC 1 cut(s) 80
HincII GTYRAC 1 cut(s) 190
HindII GTYRAC 1 cut(s) 190
HinfI GANTC 1 cut(s) 24
HphI GGTGA 1 cut(s) 160
Hpy166II GTNNAC 1 cut(s) 190
Hpy188III TCNNGA 1 cut(s) 217
Hpy8I GTNNAC 1 cut(s) 190
HpyAV CCTTC 2 cut(s) 55, 156
HpyCH4V TGCA 1 cut(s) 91
Kzo9I GATC 1 cut(s) 222
LmnI GCTCC 1 cut(s) 4
LpnPI CCDG 3 cut(s) 4, 62, 198
MaeI CTAG 1 cut(s) 71
MalI GATC 1 cut(s) 224
MboI GATC 1 cut(s) 222
MboII GAAGA 1 cut(s) 25
MhlI GDGCHC 1 cut(s) 57
MlsI TGGCCA 1 cut(s) 80
MluNI TGGCCA 1 cut(s) 80
MlyI GAGTC 1 cut(s) 33
MnlI CCTC 3 cut(s) 41, 149, 220
Mox20I TGGCCA 1 cut(s) 80
MscI TGGCCA 1 cut(s) 80
Msp20I TGGCCA 1 cut(s) 80
Mva1269I GAATGC 1 cut(s) 91
NdeII GATC 1 cut(s) 222
PctI GAATGC 1 cut(s) 91
Ple19I CGATCG 1 cut(s) 225
PleI GAGTC 1 cut(s) 32
PpsI GAGTC 1 cut(s) 32
PvuI CGATCG 1 cut(s) 225
Sau3AI GATC 1 cut(s) 222
SchI GAGTC 1 cut(s) 33
SduI GDGCHC 1 cut(s) 57
SetI ASST 1 cut(s) 173
SgeI CNNG 6 cut(s) 31, 62, 83, 89, 109, 197
SspMI CTAG 1 cut(s) 71
StyI CCWWGG 2 cut(s) 49, 96
TaqI TCGA 1 cut(s) 225
TscAI CASTG 1 cut(s) 45
TspRI CASTG 1 cut(s) 45
XspI CTAG 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.