Prupe.4G166600_v2.0.a1

protein phosphatase 2C 55

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
9673864 .. 9675152
1289 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G166600.1

Sequence Viewer

Length: 987 bp
ATGATGATTGCCAACAATAACCCTGCCTTTGGTTATGGTCCGATCAATTTCAAAAATAATAACATCCCATCAATCAATAATTTCTGTGCCCTTGGCTCTGGCTTTGGCAATGTCGATCAAGATTTTGAATTGGGGAGAAAAAGGAAGTTGAATCAACTTCCAGAATTAATACCAAAGAGGAGGAAGATCCGTAATGGAATGAAATTGGTTTGTGGGTCGTCCTATTTCCCCAAATGCAACCCAGAAAAGCCCCTCGGCGAAGACGCGCACTTCATCTCCCATGACGCCCAGACTGTCGGCGTGGCGGACGGCGTCAGTAGCTGGGCCAGGAAAGGCATCGACGCCGGCGAGTACGCAAGGGGACTCATGAACCACGCCAAACAAGCGGCTACTAATATGTCCGCCGTCGGAGCCGCCGCCGTGGATGCAGGAAAGGTGCTGAGAGAAGCCTACGTGAACAACTTCGGAATACAAGGCTCGTCGACGGCTTGCATCCTCAGCCTTGACAAAGAGCGTGGGACCCTCCACGCCGTGAATGTCGGAGACAGCGGTTTCATGGTGTTCAGGGACGCCAAGTGTATGCTCAAATCTCCAACCCAGCAGCGGAGGTTTAATTGCCCCTTCCAGTTGGGGAACCACGTCGGCAGCGACCGACCCCAGGTGGCTCTGGAGTTTGTGGTGGAGGAATTGGCGCCGGGGGACATTATCGTACTTGGGACAGATGGGTTGCTGGACAACATGTTTGCGAGTGAGATTGAGGAGGTTCTGGTGGCTTTTAATAAAGTAAGCGGTGGTCGGGATATTGATTGTGCGGAGGTAGCTTCCACCATAGCCACCCTGGCTCTGTATAATTCCTTGGACAAGGACAACATTAGCCCTTTTCAGATGGAGGCTCAAAAGGCCGGATTGGAGCACGCCGGAGGCAAGATCGACGACATCACTGTTGTGGTGGTCCACGTGGTGGAATCTACTACCTCCATCGATTAG
Functional Annotation

Protein Analysis

329

Amino Acids

35.28

Weight (kDa)

5.7

Isoelectric Point (pI)

30.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 691
AccB7I CCANNNNNTGG 1 cut(s) 961
AccI GTMKAC 1 cut(s) 482
AccII CGCG 1 cut(s) 266
AciI CCGC 9 cut(s) 305, 386, 402, 414, 417, 549, 604, 789, 812
AclWI GGATC 1 cut(s) 181
AcvI CACGTG 1 cut(s) 958
AcyI GRCGYC 5 cut(s) 285, 312, 342, 570, 692
AdeI CACNNNGTG 2 cut(s) 532, 961
AfaI GTAC 2 cut(s) 353, 711
AfiI CCNNNNNNNGG 4 cut(s) 29, 603, 658, 961
AflIII ACRYGT 1 cut(s) 738
AgsI TTSAA 3 cut(s) 52, 128, 151
AjiI CACGTC 1 cut(s) 640
AjnI CCWGG 3 cut(s) 326, 657, 837
AleI CACNNNNGTG 1 cut(s) 944
AluBI AGCT 2 cut(s) 321, 821
AluI AGCT 2 cut(s) 321, 821
Alw21I GWGCWC 1 cut(s) 915
Alw26I GTCTC 1 cut(s) 537
AlwI GGATC 1 cut(s) 181
AlwNI CAGNNNCTG 1 cut(s) 321
AoxI GGCC 2 cut(s) 324, 900
ApeKI GCWGC 2 cut(s) 601, 645
ArsI GACNNNNNNTTYG 2 cut(s) 725, 757
AseI ATTAAT 1 cut(s) 167
Asp700I GAANNNNTTC 1 cut(s) 461
AspLEI GCGC 2 cut(s) 268, 694
AspS9I GGNCC 4 cut(s) 38, 324, 519, 952
AsuC2I CCSGG 1 cut(s) 696
AvaII GGWCC 3 cut(s) 38, 519, 952
BaeGI GKGCMC 1 cut(s) 91
BanI GGYRCC 1 cut(s) 691
BbrPI CACGTG 1 cut(s) 958
BbsI GAAGAC 1 cut(s) 267
Bbv12I GWGCWC 1 cut(s) 915
BbvCI CCTCAGC 1 cut(s) 497
BbvI GCAGC 2 cut(s) 613, 657
BccI CCATC 4 cut(s) 76, 716, 880, 986
BceAI ACGGC 5 cut(s) 325, 389, 404, 501, 515
BciT130I CCWGG 3 cut(s) 328, 659, 839
BcnI CCSGG 1 cut(s) 696
BcoDI GTCTC 1 cut(s) 537
BfoI RGCGCY 1 cut(s) 695
BglI GCCNNNNNGGC 1 cut(s) 839
BisI GCNGC 5 cut(s) 387, 414, 417, 602, 646
BlsI GCNGC 5 cut(s) 388, 415, 418, 603, 647
Bme1390I CCNGG 4 cut(s) 328, 659, 696, 839
Bme18I GGWCC 3 cut(s) 38, 519, 952
BmgBI CACGTC 1 cut(s) 640
BmgT120I GGNCC 4 cut(s) 38, 324, 519, 952
BmiI GGNNCC 5 cut(s) 412, 520, 521, 635, 693
BmrFI CCNGG 4 cut(s) 328, 659, 696, 839
BmsI GCATC 3 cut(s) 345, 415, 501
BpiI GAAGAC 1 cut(s) 267
BpmI CTGGAG 1 cut(s) 689
Bpu10I CCTNAGC 1 cut(s) 497
BpuMI CCSGG 1 cut(s) 696
Bsa29I ATCGAT 1 cut(s) 981
BsaAI YACGTR 2 cut(s) 454, 958
BsaHI GRCGYC 5 cut(s) 285, 312, 342, 570, 692
BsaJI CCNNGG 7 cut(s) 91, 253, 420, 657, 695, 837, 855
BsaXI ACNNNNNCTCC 2 cut(s) 260, 290
Bsc4I CCNNNNNNNGG 4 cut(s) 29, 603, 658, 961
Bse118I RCCGGY 1 cut(s) 344
Bse1I ACTGG 1 cut(s) 625
Bse3DI GCAATG 1 cut(s) 115
BseBI CCWGG 3 cut(s) 328, 659, 839
BseCI ATCGAT 1 cut(s) 981
BseDI CCNNGG 7 cut(s) 91, 253, 420, 657, 695, 837, 855
BseGI GGATG 3 cut(s) 63, 430, 492
BseLI CCNNNNNNNGG 4 cut(s) 29, 603, 658, 961
BseMI GCAATG 1 cut(s) 115
BseMII CTCAG 2 cut(s) 431, 511
BseNI ACTGG 1 cut(s) 625
BseRI GAGGAG 2 cut(s) 193, 773
BseSI GKGCMC 1 cut(s) 91
BseXI GCAGC 2 cut(s) 613, 657
BseYI CCCAGC 2 cut(s) 321, 597
Bsh1236I CGCG 1 cut(s) 266
Bsh1285I CGRYCG 1 cut(s) 652
BshFI GGCC 2 cut(s) 326, 902
BshNI GGYRCC 1 cut(s) 691
BshVI ATCGAT 1 cut(s) 981
BsiEI CGRYCG 1 cut(s) 652
BsiHKAI GWGCWC 1 cut(s) 915
BsiSI CCGG 4 cut(s) 345, 695, 903, 918
BslFI GGGAC 5 cut(s) 375, 532, 581, 713, 730
BslI CCNNNNNNNGG 4 cut(s) 29, 603, 658, 961
BsmAI GTCTC 1 cut(s) 537
BsmFI GGGAC 5 cut(s) 375, 532, 581, 713, 730
BsnI GGCC 2 cut(s) 326, 902
Bsp1286I GDGCHC 2 cut(s) 91, 915
Bsp143I GATC 4 cut(s) 42, 115, 186, 927
BspACI CCGC 9 cut(s) 305, 386, 402, 414, 417, 549, 604, 789, 812
BspANI GGCC 2 cut(s) 326, 902
BspCNI CTCAG 2 cut(s) 432, 510
BspDI ATCGAT 1 cut(s) 981
BspFNI CGCG 1 cut(s) 266
BspHI TCATGA 1 cut(s) 366
BspLI GGNNCC 5 cut(s) 412, 520, 521, 635, 693
BspPI GGATC 1 cut(s) 181
BspT107I GGYRCC 1 cut(s) 691
BsrDI GCAATG 1 cut(s) 115
BsrFI RCCGGY 1 cut(s) 344
BsrI ACTGG 1 cut(s) 625
BssAI RCCGGY 1 cut(s) 344
BssECI CCNNGG 7 cut(s) 91, 253, 420, 657, 695, 837, 855
BssMI GATC 4 cut(s) 42, 115, 186, 927
BssNI GRCGYC 5 cut(s) 285, 312, 342, 570, 692
BssT1I CCWWGG 2 cut(s) 91, 855
Bst2UI CCWGG 3 cut(s) 328, 659, 839
Bst4CI ACNGT 2 cut(s) 295, 943
BstACI GRCGYC 5 cut(s) 285, 312, 342, 570, 692
BstBAI YACGTR 2 cut(s) 454, 958
BstC8I GCNNGC 3 cut(s) 346, 490, 915
BstDEI CTNAG 2 cut(s) 440, 497
BstDSI CCRYGG 1 cut(s) 420
BstF5I GGATG 3 cut(s) 63, 430, 492
BstFNI CGCG 1 cut(s) 266
BstH2I RGCGCY 1 cut(s) 695
BstHHI GCGC 2 cut(s) 268, 694
BstKTI GATC 4 cut(s) 45, 118, 189, 930
BstMAI GTCTC 1 cut(s) 537
BstMBI GATC 4 cut(s) 42, 115, 186, 927
BstMCI CGRYCG 1 cut(s) 652
BstMWI GCNNNNNNNGC 8 cut(s) 318, 383, 410, 425, 498, 818, 839, 899
BstNI CCWGG 3 cut(s) 328, 659, 839
BstNSI RCATGY 1 cut(s) 742
BstSCI CCNGG 4 cut(s) 326, 657, 694, 837
BstSLI GKGCMC 1 cut(s) 91
BstUI CGCG 1 cut(s) 266
BstV1I GCAGC 2 cut(s) 613, 657
BstV2I GAAGAC 1 cut(s) 267
BstX2I RGATCY 1 cut(s) 186
BstYI RGATCY 1 cut(s) 186
Bsu15I ATCGAT 1 cut(s) 981
BsuRI GGCC 2 cut(s) 326, 902
BsuTUI ATCGAT 1 cut(s) 981
BtgI CCRYGG 1 cut(s) 420
BtrI CACGTC 1 cut(s) 640
BtsCI GGATG 3 cut(s) 63, 430, 492
BtsIMutI CAGTG 1 cut(s) 939
Cac8I GCNNGC 3 cut(s) 346, 490, 915
CaiI CAGNNNCTG 1 cut(s) 321
CciI TCATGA 1 cut(s) 366
CfoI GCGC 2 cut(s) 268, 694
Cfr10I RCCGGY 1 cut(s) 344
Cfr13I GGNCC 4 cut(s) 38, 324, 519, 952
ClaI ATCGAT 1 cut(s) 981
CseI GACGC 5 cut(s) 272, 293, 301, 350, 578
Csp6I GTAC 2 cut(s) 352, 710
CspCI CAANNNNNGTGG 2 cut(s) 496, 531
CviAII CATG 4 cut(s) 281, 367, 556, 739
CviQI GTAC 2 cut(s) 352, 710
DdeI CTNAG 2 cut(s) 440, 497
DinI GGCGCC 1 cut(s) 693
DpnI GATC 4 cut(s) 44, 117, 188, 929
DpnII GATC 4 cut(s) 42, 115, 186, 927
DraIII CACNNNGTG 2 cut(s) 532, 961
EciI GGCGGA 2 cut(s) 320, 391
Eco130I CCWWGG 2 cut(s) 91, 855
Eco47I GGWCC 3 cut(s) 38, 519, 952
Eco72I CACGTG 1 cut(s) 958
EcoO109I RGGNCCY 1 cut(s) 519
EcoRII CCWGG 3 cut(s) 326, 657, 837
EcoT14I CCWWGG 2 cut(s) 91, 855
EgeI GGCGCC 1 cut(s) 693
EheI GGCGCC 1 cut(s) 693
ErhI CCWWGG 2 cut(s) 91, 855
FaeI CATG 4 cut(s) 284, 370, 559, 742
FaiI YATR 9 cut(s) 36, 282, 368, 398, 557, 581, 740, 830, 849
FaqI GGGAC 5 cut(s) 375, 532, 581, 713, 730
FatI CATG 4 cut(s) 280, 366, 555, 738
FblI GTMKAC 1 cut(s) 482
Fnu4HI GCNGC 5 cut(s) 387, 414, 417, 602, 646
FokI GGATG 3 cut(s) 50, 437, 479
Fsp4HI GCNGC 5 cut(s) 387, 414, 417, 602, 646
GlaI GCGC 2 cut(s) 267, 693
GluI GCNGC 5 cut(s) 387, 414, 417, 602, 646
GsaI CCCAGC 2 cut(s) 325, 601
GsuI CTGGAG 1 cut(s) 689
HaeII RGCGCY 1 cut(s) 695
HaeIII GGCC 2 cut(s) 326, 902
HapII CCGG 4 cut(s) 345, 695, 903, 918
HgaI GACGC 5 cut(s) 272, 293, 301, 350, 578
HhaI GCGC 2 cut(s) 268, 694
Hin1I GRCGYC 5 cut(s) 285, 312, 342, 570, 692
Hin1II CATG 4 cut(s) 284, 370, 559, 742
Hin6I GCGC 2 cut(s) 266, 692
HinP1I GCGC 2 cut(s) 266, 692
HincII GTYRAC 1 cut(s) 483
HindII GTYRAC 1 cut(s) 483
HinfI GANTC 3 cut(s) 151, 363, 965
HpaII CCGG 4 cut(s) 345, 695, 903, 918
Hpy166II GTNNAC 3 cut(s) 457, 483, 955
Hpy188I TCNGA 5 cut(s) 42, 410, 467, 542, 885
Hpy188III TCNNGA 5 cut(s) 119, 161, 367, 668, 797
Hpy8I GTNNAC 3 cut(s) 457, 483, 955
Hpy99I CGWCG 6 cut(s) 344, 410, 484, 487, 644, 935
HpyAV CCTTC 1 cut(s) 631
HpyCH4III ACNGT 2 cut(s) 295, 943
HpyCH4IV ACGT 3 cut(s) 453, 639, 957
HpyCH4V TGCA 3 cut(s) 237, 428, 492
HpyF10VI GCNNNNNNNGC 8 cut(s) 318, 383, 410, 425, 498, 818, 839, 899
HpyF3I CTNAG 2 cut(s) 440, 497
HpySE526I ACGT 3 cut(s) 453, 639, 957
Hsp92I GRCGYC 5 cut(s) 285, 312, 342, 570, 692
Hsp92II CATG 4 cut(s) 284, 370, 559, 742
HspAI GCGC 2 cut(s) 266, 692
KasI GGCGCC 1 cut(s) 691
KflI GGGWCCC 1 cut(s) 519
KroI GCCGGC 1 cut(s) 344
KroNI GCCGGC 1 cut(s) 346
Kzo9I GATC 4 cut(s) 42, 115, 186, 927
LmnI GCTCC 2 cut(s) 410, 910
Lsp1109I GCAGC 2 cut(s) 613, 657
LweI GCATC 3 cut(s) 345, 415, 501
MaeII ACGT 3 cut(s) 453, 639, 957
MalI GATC 4 cut(s) 44, 117, 188, 929
MboI GATC 4 cut(s) 42, 115, 186, 927
MboII GAAGA 2 cut(s) 196, 272
MflI RGATCY 1 cut(s) 186
MhlI GDGCHC 2 cut(s) 91, 915
MluCI AATT 8 cut(s) 46, 79, 128, 164, 203, 613, 686, 850
Mly113I GGCGCC 1 cut(s) 692
MlyI GAGTC 1 cut(s) 357
MmeI TCCRAC 3 cut(s) 388, 520, 617
MreI CGCCGGCG 1 cut(s) 344
MroNI GCCGGC 1 cut(s) 344
MroXI GAANNNNTTC 1 cut(s) 461
MseI TTAA 3 cut(s) 167, 612, 777
MslI CAYNNNNRTG 1 cut(s) 944
MspA1I CMGCKG 2 cut(s) 549, 604
MspI CCGG 4 cut(s) 345, 695, 903, 918
MspR9I CCNGG 4 cut(s) 328, 659, 696, 839
MvaI CCWGG 3 cut(s) 328, 659, 839
MvnI CGCG 1 cut(s) 266
MwoI GCNNNNNNNGC 8 cut(s) 318, 383, 410, 425, 498, 818, 839, 899
NaeI GCCGGC 1 cut(s) 346
NarI GGCGCC 1 cut(s) 692
NciI CCSGG 1 cut(s) 696
NdeII GATC 4 cut(s) 42, 115, 186, 927
NgoMIV GCCGGC 1 cut(s) 344
NlaIII CATG 4 cut(s) 284, 370, 559, 742
NlaIV GGNNCC 5 cut(s) 412, 520, 521, 635, 693
NmeAIII GCCGAG 1 cut(s) 234
NspI RCATGY 1 cut(s) 742
OliI CACNNNNGTG 1 cut(s) 944
PagI TCATGA 1 cut(s) 366
PciI ACATGT 1 cut(s) 738
PcsI WCGNNNNNNNCGW 2 cut(s) 345, 645
PdiI GCCGGC 1 cut(s) 346
PdmI GAANNNNTTC 1 cut(s) 461
PfeI GAWTC 2 cut(s) 151, 965
PflFI GACNNNGTC 1 cut(s) 311
PflMI CCANNNNNTGG 1 cut(s) 961
PkrI GCNGC 5 cut(s) 388, 415, 418, 603, 647
PleI GAGTC 1 cut(s) 357
PluTI GGCGCC 1 cut(s) 695
PmaCI CACGTG 1 cut(s) 958
PmlI CACGTG 1 cut(s) 958
PpsI GAGTC 1 cut(s) 357
Ppu21I YACGTR 2 cut(s) 454, 958
PpuMI RGGWCCY 1 cut(s) 519
PscI ACATGT 1 cut(s) 738
PshBI ATTAAT 1 cut(s) 167
Psp5II RGGWCCY 1 cut(s) 519
Psp6I CCWGG 3 cut(s) 326, 657, 837
PspCI CACGTG 1 cut(s) 958
PspFI CCCAGC 2 cut(s) 321, 597
PspGI CCWGG 3 cut(s) 326, 657, 837
PspN4I GGNNCC 5 cut(s) 412, 520, 521, 635, 693
PspPI GGNCC 4 cut(s) 38, 324, 519, 952
PspPPI RGGWCCY 1 cut(s) 519
PstNI CAGNNNCTG 1 cut(s) 321
PsuI RGATCY 1 cut(s) 186
PsyI GACNNNGTC 1 cut(s) 311
RsaI GTAC 2 cut(s) 353, 711
RsaNI GTAC 2 cut(s) 352, 710
RseI CAYNNNNRTG 1 cut(s) 944
SalI GTCGAC 1 cut(s) 481
SaqAI TTAA 3 cut(s) 167, 612, 777
SatI GCNGC 5 cut(s) 387, 414, 417, 602, 646
Sau3AI GATC 4 cut(s) 42, 115, 186, 927
Sau96I GGNCC 4 cut(s) 38, 324, 519, 952
SchI GAGTC 1 cut(s) 357
ScrFI CCNGG 4 cut(s) 328, 659, 696, 839
SduI GDGCHC 2 cut(s) 91, 915
SfaNI GCATC 3 cut(s) 345, 415, 501
SfoI GGCGCC 1 cut(s) 693
SgrAI CRCCGGYG 1 cut(s) 344
SgrDI CGTCGACG 1 cut(s) 481
SinI GGWCC 3 cut(s) 38, 519, 952
SmiMI CAYNNNNRTG 1 cut(s) 944
Sse9I AATT 8 cut(s) 46, 79, 128, 164, 203, 613, 686, 850
SsiI CCGC 9 cut(s) 305, 386, 402, 414, 417, 549, 604, 789, 812
SspDI GGCGCC 1 cut(s) 691
StyD4I CCNGG 4 cut(s) 326, 657, 694, 837
StyI CCWWGG 2 cut(s) 91, 855
TaaI ACNGT 2 cut(s) 295, 943
TaiI ACGT 3 cut(s) 456, 642, 960
TaqI TCGA 5 cut(s) 114, 339, 482, 930, 981
TaqII GACCGA 1 cut(s) 666
TasI AATT 8 cut(s) 46, 79, 128, 164, 203, 613, 686, 850
TauI GCSGC 3 cut(s) 389, 416, 419
TfiI GAWTC 2 cut(s) 151, 965
Tru1I TTAA 3 cut(s) 167, 612, 777
Tru9I TTAA 3 cut(s) 167, 612, 777
TscAI CASTG 1 cut(s) 946
TseI GCWGC 2 cut(s) 601, 645
TspDTI ATGAA 4 cut(s) 215, 262, 383, 544
TspGWI ACGGA 1 cut(s) 179
TspRI CASTG 1 cut(s) 946
Tth111I GACNNNGTC 1 cut(s) 311
Van91I CCANNNNNTGG 1 cut(s) 961
VpaK11BI GGWCC 3 cut(s) 38, 519, 952
VspI ATTAAT 1 cut(s) 167
XceI RCATGY 1 cut(s) 742
XcmI CCANNNNNNNNNTGG 1 cut(s) 835
XmiI GTMKAC 1 cut(s) 482
XmnI GAANNNNTTC 1 cut(s) 461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.