Prupe.5G049700_v2.0.a1

Protein phosphatase 2C 55

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
5259348 .. 5260442
1095 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G049700.1

Sequence Viewer

Length: 1095 bp
ATGATCGCCGCCAACAAGCCGCCTGCGTTTGGTTTGGGGCCGATCCATAATTGCTATGGCTGCTGTGGCTATGGCCGTGGCCCGTATCATAAGAAGAAGTTGAATAGCCGTACTGATCAACTTCATCTGATTTGTGGGTCGTGCTATTTACCCAAAGAGAACAAGGAAAAACCCCTGGGCGAAGACGCCCACTTCATCTGCCATGACGCCCAGACCATCGGAGTGGCGGACGGCGTCGGCGGTTGGGCCAGGAAAGGCGTCGACGCCGGCGAGTACGCAAGGGGACTCATGAACCACGCCAAGAAAACAGCCACGGGCATAACCCGATCCTCCGCCGCAGCCGTCGATCCAAGAAAGGTGTTGAGCGAAGCCTACGCGAACAATGCCGGAGTACAAGGGTCGTCTACGGCTTGCATCCTCAGCCTCGACAAGGAGCGTGGGACCCTACACGCCGTGAATGTCGGGGACAGCGGGTTCATGGTGTTCAGGGACAACATGTGTTTCTTCAAGTCATCAACTCAGCAGCGGAGCTTTAACTGTCCGTATCAGTTGGGTAACTGCGTGGGCGGCGACTGTCCCGAGGCGGCGGAGGAGTTTGAGGTTGAGGAATTGAGGCCGGGGGACATAATAGTACTTGGGACAGATGGGTTGCTGGACAACATTTTCGCTAGCGAGATTGAAGAGGTTATTGTGGCGTATGACGTAAGCGGTCAGGATTGTGAGGAGTTGGCTTCGTACATAGCCAACCGAGCGCTGTATAACTCATTGGACAAGTACAACGTTAGCCCCTTTCAAATGGAGGCACAGAAGGCTGGACGAGAGCACGTGGGAGGCAAGATCGACGACATCACTGTTGTCGTCGCACGTGTGTTGGCTTCTACTAAAAATAAAAATAAAAATATATACAAAAAGTTATCAATTGAAAGGAACACTGGAACCACGACTAGAGCCTACAGCCTAAAGTTTCAGTTTCACATTGGTGAGAGACACAAAGCTTTTGACGTTCCTTGTCAAAATGCATTTCTGCGATACACTTTTAGCTGCTTTCGCAACTCAGCGAACTTAGCTAAGCGCTTTCTAGAATGTGCGACCTAG
Functional Annotation

Protein Analysis

365

Amino Acids

39.84

Weight (kDa)

7.85

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 261, 404
AccII CGCG 1 cut(s) 377
AclI AACGTT 1 cut(s) 780
AclWI GGATC 3 cut(s) 37, 321, 341
AcoI YGGCCR 1 cut(s) 73
AcvI CACGTG 2 cut(s) 826, 866
AcyI GRCGYC 5 cut(s) 186, 207, 234, 258, 264
AdeI CACNNNGTG 1 cut(s) 454
AfaI GTAC 6 cut(s) 112, 275, 393, 633, 737, 776
AfeI AGCGCT 2 cut(s) 753, 1073
AfiI CCNNNNNNNGG 2 cut(s) 29, 430
AflIII ACRYGT 2 cut(s) 495, 865
AgsI TTSAA 5 cut(s) 103, 508, 680, 794, 923
AjnI CCWGG 2 cut(s) 174, 248
AleI CACNNNNGTG 1 cut(s) 978
AloI GAACNNNNNNTCC 2 cut(s) 458, 490
AluBI AGCT 4 cut(s) 531, 995, 1041, 1067
AluI AGCT 4 cut(s) 531, 995, 1041, 1067
Alw21I GWGCWC 1 cut(s) 825
Alw26I GTCTC 1 cut(s) 979
AlwI GGATC 3 cut(s) 37, 321, 341
Ama87I CYCGRG 1 cut(s) 578
Aor51HI AGCGCT 2 cut(s) 753, 1073
AoxI GGCC 5 cut(s) 38, 73, 79, 246, 614
ApeKI GCWGC 4 cut(s) 60, 338, 523, 1041
ArsI GACNNNNNNTTYG 2 cut(s) 647, 679
AspLEI GCGC 2 cut(s) 754, 1074
AspS9I GGNCC 4 cut(s) 38, 80, 246, 441
AsuC2I CCSGG 1 cut(s) 618
AsuHPI GGTGA 1 cut(s) 992
AsuNHI GCTAGC 1 cut(s) 668
AvaI CYCGRG 1 cut(s) 578
AvaII GGWCC 1 cut(s) 441
BbrPI CACGTG 2 cut(s) 826, 866
BbsI GAAGAC 1 cut(s) 189
Bbv12I GWGCWC 1 cut(s) 825
BbvCI CCTCAGC 1 cut(s) 419
BbvI GCAGC 4 cut(s) 47, 350, 535, 1028
BccI CCATC 2 cut(s) 224, 638
BceAI ACGGC 6 cut(s) 60, 93, 247, 326, 423, 437
BciT130I CCWGG 2 cut(s) 176, 250
BclI TGATCA 1 cut(s) 115
BcnI CCSGG 1 cut(s) 618
BcoDI GTCTC 1 cut(s) 979
BfaI CTAG 4 cut(s) 669, 945, 1079, 1093
BfmI CTRYAG 1 cut(s) 952
BfoI RGCGCY 2 cut(s) 755, 1075
BisI GCNGC 9 cut(s) 9, 20, 61, 336, 339, 524, 568, 585, 1042
BlpI GCTNAGC 1 cut(s) 1068
BlsI GCNGC 9 cut(s) 10, 21, 62, 337, 340, 525, 569, 586, 1043
BmcAI AGTACT 1 cut(s) 633
Bme1390I CCNGG 3 cut(s) 176, 250, 618
Bme18I GGWCC 1 cut(s) 441
BmeT110I CYCGRG 1 cut(s) 578
BmgT120I GGNCC 4 cut(s) 38, 80, 246, 441
BmiI GGNNCC 4 cut(s) 39, 442, 443, 937
BmrFI CCNGG 3 cut(s) 176, 250, 618
BmsI GCATC 1 cut(s) 423
BmtI GCTAGC 1 cut(s) 672
BpiI GAAGAC 1 cut(s) 189
Bpu10I CCTNAGC 1 cut(s) 419
Bpu1102I GCTNAGC 1 cut(s) 1068
BpuMI CCSGG 1 cut(s) 618
BsaAI YACGTR 2 cut(s) 826, 866
BsaHI GRCGYC 5 cut(s) 186, 207, 234, 258, 264
BsaJI CCNNGG 6 cut(s) 76, 174, 175, 312, 579, 617
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 430
Bse118I RCCGGY 1 cut(s) 266
Bse1I ACTGG 1 cut(s) 937
BseBI CCWGG 2 cut(s) 176, 250
BseDI CCNNGG 6 cut(s) 76, 174, 175, 312, 579, 617
BseGI GGATG 1 cut(s) 414
BseLI CCNNNNNNNGG 2 cut(s) 29, 430
BseMII CTCAG 3 cut(s) 433, 533, 1068
BseNI ACTGG 1 cut(s) 937
BseRI GAGGAG 2 cut(s) 605, 737
BseXI GCAGC 4 cut(s) 47, 350, 535, 1028
Bsh1236I CGCG 1 cut(s) 377
BshFI GGCC 5 cut(s) 40, 75, 81, 248, 616
BsiHKAI GWGCWC 1 cut(s) 825
BsiHKCI CYCGRG 1 cut(s) 578
BsiSI CCGG 3 cut(s) 267, 387, 617
BslFI GGGAC 7 cut(s) 297, 454, 479, 503, 561, 635, 652
BslI CCNNNNNNNGG 2 cut(s) 29, 430
BsmAI GTCTC 1 cut(s) 979
BsmFI GGGAC 7 cut(s) 297, 454, 479, 503, 561, 635, 652
BsnI GGCC 5 cut(s) 40, 75, 81, 248, 616
BsoBI CYCGRG 1 cut(s) 578
Bsp1286I GDGCHC 1 cut(s) 825
Bsp143I GATC 6 cut(s) 3, 42, 115, 326, 346, 837
Bsp1720I GCTNAGC 1 cut(s) 1068
BspANI GGCC 5 cut(s) 40, 75, 81, 248, 616
BspCNI CTCAG 3 cut(s) 432, 532, 1067
BspFNI CGCG 1 cut(s) 377
BspHI TCATGA 1 cut(s) 288
BspLI GGNNCC 4 cut(s) 39, 442, 443, 937
BspOI GCTAGC 1 cut(s) 672
BspPI GGATC 3 cut(s) 37, 321, 341
BsrFI RCCGGY 1 cut(s) 266
BsrI ACTGG 1 cut(s) 937
BssAI RCCGGY 1 cut(s) 266
BssECI CCNNGG 6 cut(s) 76, 174, 175, 312, 579, 617
BssMI GATC 6 cut(s) 3, 42, 115, 326, 346, 837
BssNI GRCGYC 5 cut(s) 186, 207, 234, 258, 264
Bst2UI CCWGG 2 cut(s) 176, 250
Bst4CI ACNGT 3 cut(s) 539, 575, 853
Bst6I CTCTTC 1 cut(s) 675
BstACI GRCGYC 5 cut(s) 186, 207, 234, 258, 264
BstBAI YACGTR 2 cut(s) 826, 866
BstC8I GCNNGC 4 cut(s) 24, 268, 412, 670
BstDEI CTNAG 5 cut(s) 419, 519, 1054, 1063, 1068
BstDSI CCRYGG 2 cut(s) 76, 312
BstENI CCTNNNNNAGG 1 cut(s) 428
BstF5I GGATG 1 cut(s) 414
BstFNI CGCG 1 cut(s) 377
BstH2I RGCGCY 2 cut(s) 755, 1075
BstHHI GCGC 2 cut(s) 754, 1074
BstKTI GATC 6 cut(s) 6, 45, 118, 329, 349, 840
BstMAI GTCTC 1 cut(s) 979
BstMBI GATC 6 cut(s) 3, 42, 115, 326, 346, 837
BstMWI GCNNNNNNNGC 9 cut(s) 60, 66, 383, 420, 567, 749, 809, 1047, 1064
BstNI CCWGG 2 cut(s) 176, 250
BstNSI RCATGY 1 cut(s) 499
BstSCI CCNGG 3 cut(s) 174, 248, 616
BstSFI CTRYAG 1 cut(s) 952
BstUI CGCG 1 cut(s) 377
BstV1I GCAGC 4 cut(s) 47, 350, 535, 1028
BstV2I GAAGAC 1 cut(s) 189
BstXI CCANNNNNNTGG 1 cut(s) 223
BsuRI GGCC 5 cut(s) 40, 75, 81, 248, 616
BtgI CCRYGG 2 cut(s) 76, 312
BtsCI GGATG 1 cut(s) 414
BtsIMutI CAGTG 2 cut(s) 849, 930
Cac8I GCNNGC 4 cut(s) 24, 268, 412, 670
CciI TCATGA 1 cut(s) 288
CfoI GCGC 2 cut(s) 754, 1074
Cfr10I RCCGGY 1 cut(s) 266
Cfr13I GGNCC 4 cut(s) 38, 80, 246, 441
CseI GACGC 5 cut(s) 194, 215, 223, 247, 272
Csp6I GTAC 6 cut(s) 111, 274, 392, 632, 736, 775
CspCI CAANNNNNGTGG 2 cut(s) 418, 453
CviAII CATG 4 cut(s) 203, 289, 478, 496
CviQI GTAC 6 cut(s) 111, 274, 392, 632, 736, 775
DdeI CTNAG 5 cut(s) 419, 519, 1054, 1063, 1068
DpnI GATC 6 cut(s) 5, 44, 117, 328, 348, 839
DpnII GATC 6 cut(s) 3, 42, 115, 326, 346, 837
DraIII CACNNNGTG 1 cut(s) 454
EaeI YGGCCR 1 cut(s) 73
Eam1104I CTCTTC 1 cut(s) 675
EarI CTCTTC 1 cut(s) 675
EciI GGCGGA 3 cut(s) 242, 322, 602
Eco47I GGWCC 1 cut(s) 441
Eco47III AGCGCT 2 cut(s) 753, 1073
Eco72I CACGTG 2 cut(s) 826, 866
Eco88I CYCGRG 1 cut(s) 578
EcoNI CCTNNNNNAGG 1 cut(s) 428
EcoO109I RGGNCCY 1 cut(s) 441
EcoRII CCWGG 2 cut(s) 174, 248
EcoT22I ATGCAT 1 cut(s) 1021
FaeI CATG 4 cut(s) 206, 292, 481, 499
FaqI GGGAC 7 cut(s) 297, 454, 479, 503, 561, 635, 652
FatI CATG 4 cut(s) 202, 288, 477, 495
FauI CCCGC 1 cut(s) 464
FbaI TGATCA 1 cut(s) 115
FblI GTMKAC 2 cut(s) 261, 404
Fnu4HI GCNGC 9 cut(s) 9, 20, 61, 336, 339, 524, 568, 585, 1042
FokI GGATG 1 cut(s) 401
Fsp4HI GCNGC 9 cut(s) 9, 20, 61, 336, 339, 524, 568, 585, 1042
FspBI CTAG 4 cut(s) 669, 945, 1079, 1093
GlaI GCGC 2 cut(s) 753, 1073
GluI GCNGC 9 cut(s) 9, 20, 61, 336, 339, 524, 568, 585, 1042
HaeII RGCGCY 2 cut(s) 755, 1075
HaeIII GGCC 5 cut(s) 40, 75, 81, 248, 616
HapII CCGG 3 cut(s) 267, 387, 617
HgaI GACGC 5 cut(s) 194, 215, 223, 247, 272
HhaI GCGC 2 cut(s) 754, 1074
Hin1I GRCGYC 5 cut(s) 186, 207, 234, 258, 264
Hin1II CATG 4 cut(s) 206, 292, 481, 499
Hin6I GCGC 2 cut(s) 752, 1072
HinP1I GCGC 2 cut(s) 752, 1072
HincII GTYRAC 1 cut(s) 262
HindII GTYRAC 1 cut(s) 262
HindIII AAGCTT 1 cut(s) 993
HinfI GANTC 1 cut(s) 285
HpaII CCGG 3 cut(s) 267, 387, 617
HphI GGTGA 1 cut(s) 992
Hpy166II GTNNAC 2 cut(s) 262, 405
Hpy188I TCNGA 2 cut(s) 129, 221
Hpy188III TCNNGA 4 cut(s) 289, 578, 713, 1079
Hpy8I GTNNAC 2 cut(s) 262, 405
Hpy99I CGWCG 6 cut(s) 239, 263, 266, 347, 845, 863
HpyAV CCTTC 1 cut(s) 802
HpyCH4III ACNGT 3 cut(s) 539, 575, 853
HpyCH4IV ACGT 5 cut(s) 702, 780, 825, 865, 1002
HpyCH4V TGCA 2 cut(s) 414, 1019
HpyF10VI GCNNNNNNNGC 9 cut(s) 60, 66, 383, 420, 567, 749, 809, 1047, 1064
HpyF3I CTNAG 5 cut(s) 419, 519, 1054, 1063, 1068
HpySE526I ACGT 5 cut(s) 702, 780, 825, 865, 1002
Hsp92I GRCGYC 5 cut(s) 186, 207, 234, 258, 264
Hsp92II CATG 4 cut(s) 206, 292, 481, 499
HspAI GCGC 2 cut(s) 752, 1072
KflI GGGWCCC 1 cut(s) 441
KroI GCCGGC 1 cut(s) 266
KroNI GCCGGC 1 cut(s) 268
Ksp22I TGATCA 1 cut(s) 115
Kzo9I GATC 6 cut(s) 3, 42, 115, 326, 346, 837
LmnI GCTCC 2 cut(s) 433, 528
Lsp1109I GCAGC 4 cut(s) 47, 350, 535, 1028
LweI GCATC 1 cut(s) 423
MaeI CTAG 4 cut(s) 669, 945, 1079, 1093
MaeII ACGT 5 cut(s) 702, 780, 825, 865, 1002
MaeIII GTNAC 1 cut(s) 554
MalI GATC 6 cut(s) 5, 44, 117, 328, 348, 839
MboI GATC 6 cut(s) 3, 42, 115, 326, 346, 837
MboII GAAGA 4 cut(s) 106, 194, 496, 692
MfeI CAATTG 1 cut(s) 918
MhlI GDGCHC 1 cut(s) 825
MluCI AATT 3 cut(s) 49, 608, 918
MlyI GAGTC 1 cut(s) 279
Mph1103I ATGCAT 1 cut(s) 1021
MreI CGCCGGCG 1 cut(s) 266
MroNI GCCGGC 1 cut(s) 266
MseI TTAA 1 cut(s) 534
MslI CAYNNNNRTG 2 cut(s) 221, 978
MspA1I CMGCKG 2 cut(s) 471, 526
MspI CCGG 3 cut(s) 267, 387, 617
MspR9I CCNGG 3 cut(s) 176, 250, 618
MunI CAATTG 1 cut(s) 918
MvaI CCWGG 2 cut(s) 176, 250
MvnI CGCG 1 cut(s) 377
MwoI GCNNNNNNNGC 9 cut(s) 60, 66, 383, 420, 567, 749, 809, 1047, 1064
NaeI GCCGGC 1 cut(s) 268
NciI CCSGG 1 cut(s) 618
NdeII GATC 6 cut(s) 3, 42, 115, 326, 346, 837
NgoMIV GCCGGC 1 cut(s) 266
NheI GCTAGC 1 cut(s) 668
NlaIII CATG 4 cut(s) 206, 292, 481, 499
NlaIV GGNNCC 4 cut(s) 39, 442, 443, 937
NsiI ATGCAT 1 cut(s) 1021
NspI RCATGY 1 cut(s) 499
OliI CACNNNNGTG 1 cut(s) 978
PagI TCATGA 1 cut(s) 288
PasI CCCWGGG 1 cut(s) 175
PciI ACATGT 1 cut(s) 495
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PdiI GCCGGC 1 cut(s) 268
PflFI GACNNNGTC 1 cut(s) 233
PkrI GCNGC 9 cut(s) 10, 21, 62, 337, 340, 525, 569, 586, 1043
PleI GAGTC 1 cut(s) 279
PmaCI CACGTG 2 cut(s) 826, 866
PmlI CACGTG 2 cut(s) 826, 866
PpsI GAGTC 1 cut(s) 279
Ppu21I YACGTR 2 cut(s) 826, 866
PpuMI RGGWCCY 1 cut(s) 441
PscI ACATGT 1 cut(s) 495
Psp1406I AACGTT 1 cut(s) 780
Psp5II RGGWCCY 1 cut(s) 441
Psp6I CCWGG 2 cut(s) 174, 248
PspCI CACGTG 2 cut(s) 826, 866
PspGI CCWGG 2 cut(s) 174, 248
PspN4I GGNNCC 4 cut(s) 39, 442, 443, 937
PspPI GGNCC 4 cut(s) 38, 80, 246, 441
PspPPI RGGWCCY 1 cut(s) 441
PsyI GACNNNGTC 1 cut(s) 233
RsaI GTAC 6 cut(s) 112, 275, 393, 633, 737, 776
RsaNI GTAC 6 cut(s) 111, 274, 392, 632, 736, 775
RseI CAYNNNNRTG 2 cut(s) 221, 978
SalI GTCGAC 1 cut(s) 260
SaqAI TTAA 1 cut(s) 534
SatI GCNGC 9 cut(s) 9, 20, 61, 336, 339, 524, 568, 585, 1042
Sau3AI GATC 6 cut(s) 3, 42, 115, 326, 346, 837
Sau96I GGNCC 4 cut(s) 38, 80, 246, 441
ScaI AGTACT 1 cut(s) 633
SchI GAGTC 1 cut(s) 279
ScrFI CCNGG 3 cut(s) 176, 250, 618
SduI GDGCHC 1 cut(s) 825
SfaNI GCATC 1 cut(s) 423
SfcI CTRYAG 1 cut(s) 952
SgrAI CRCCGGYG 1 cut(s) 266
SgrDI CGTCGACG 1 cut(s) 260
SinI GGWCC 1 cut(s) 441
SmiMI CAYNNNNRTG 2 cut(s) 221, 978
Sse9I AATT 3 cut(s) 49, 608, 918
SspMI CTAG 4 cut(s) 669, 945, 1079, 1093
StyD4I CCNGG 3 cut(s) 174, 248, 616
TaaI ACNGT 3 cut(s) 539, 575, 853
TaiI ACGT 5 cut(s) 705, 783, 828, 868, 1005
TaqI TCGA 4 cut(s) 261, 345, 426, 840
TasI AATT 3 cut(s) 49, 608, 918
TatI WGTACW 3 cut(s) 391, 631, 774
TauI GCSGC 5 cut(s) 11, 22, 338, 570, 587
Tru1I TTAA 1 cut(s) 534
Tru9I TTAA 1 cut(s) 534
TscAI CASTG 2 cut(s) 856, 937
TseI GCWGC 4 cut(s) 60, 338, 523, 1041
TspDTI ATGAA 4 cut(s) 113, 184, 305, 466
TspGWI ACGGA 1 cut(s) 531
TspRI CASTG 2 cut(s) 856, 937
Tth111I GACNNNGTC 1 cut(s) 233
VpaK11BI GGWCC 1 cut(s) 441
XagI CCTNNNNNAGG 1 cut(s) 428
XbaI TCTAGA 1 cut(s) 1078
XceI RCATGY 1 cut(s) 499
XcmI CCANNNNNNNNNTGG 1 cut(s) 53
XmiI GTMKAC 2 cut(s) 261, 404
XspI CTAG 4 cut(s) 669, 945, 1079, 1093
ZrmI AGTACT 1 cut(s) 633
Zsp2I ATGCAT 1 cut(s) 1021
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.