Prupe.5G019700_v2.0.a1

polyamine transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
2179329 .. 2181963
2635 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G019700.1

Sequence Viewer

Length: 1464 bp
ATGCAGAATCTGAGAACCACAGAGAATAGGCAAGGTTCCATTGCAATGGGAGAGTGCAATGGTGATGCATATGTTTCAGTGGGTGAACTGGATTCCCCTAGGATAGATAACTTCAAGAAAGTCTCACTTCTGCCCCTTGTCTTCCTCATCTTCTATGAGGTTTCTGGGGGACCATTTGGGGTTGAGGATAGTGTCCAGGCTGCTGGCCCCCTTCTAGCCCTTCTCGGATTCTTGGTCTTTCCACTCATTTGGAGTGTTCCCGAGGCCTTAATTACCGCAGAGATGGGTACCATGTTCCCTGAGGCTGGCGGTTATGTAGTTTGGGTTTCGTCGGCTTTGGGTCCCTATTGGGGGTTCCAGCAGGGCTGGATGAAATGGCTAAGTGGGGTTATTGATAATGCTCTGTACCCAGTTCTGTTTCTGGACTATTTGAAGTCGGGGATCCCAGCTTTAGGTGGTGGCCTTCCAAGAATCATAGCCGTGTTGGTTTTGACGTCGGTGCTCACTTACATGAACTATAGGGGTTTAGCCATTGTGGGATGGGCTGCTGTTCTTTTAGGGGTTTTCTCACTCACTCCTTTTGTGGTTATGGGACTTGTGGCAATTCCCAAGTTGCAGCCTTCGAGATGGTTAGTGGTAAATCTACATAGTGTGGACTGGAATTTGTATTTGAACACTCTCTTTTGGAATCTAAATTATTGGGACTCGATAAGTACACTTGCAGGGGAGGTAGAAAACCCAAAGAAAACTCTACCGAAGGCTCTGTTTTGTGCCTTGATTTTGGTTGTTGTTGGGTATTTGTTCCCTCTTCTAACTGGTACCGGGGCTGTTCCCCTCAACCGAGAGTTGTGGACTGATGGATACTTCTCAGATATTGCTAAAATTATTGGGGGAGTTTGGTTGAGATGGTGGATCCAAGGGGCTGCGGCAATGTCAAATATGGGGATGTTTGTGGCTGAAATGAGCAGTGACTCCTTCCAACTTCTTGGGATGGCAGAACGAGGTATGCTGCCTGAGTTTTTCGCTAAAAGGTCTCGCTATGGAACCCCAGTGATCGGCATTTTGTTCTCAGCTTCTGGAGTCCTTTTTCTATCTTGGCTGAGCTTTCAAGAGATTGTAGCTGCAGAAAACTTCTTGTACTGTTTTGGAATGATTCTAGAGTTCCTATCATTTATACGGTTAAGAGTGAAGTACCCGGCAGCATCTCGGCCTTACAAGATACCTGTTGGAACAGTTGGAGCCATTCTTTTGTGCATTCCTCCAACCATACTGATTTGTACAGTTTTGGCATTTTCTACTCTCAAGGTGGTGGTTGTGAGCGTCGGAGCCATTATGATCGGCCTTGTGATGCAGCCATGTCTTATGTATGTGGAGAAAAAGAAGTGGATCAAGTTTTCTACCAGCACTGACCTCCCAGATCTTCATGGTGCTAATCAGGGGAGTGTTAACTCCTTAATAGATTAG

Protein Analysis

488

Amino Acids

53.44

Weight (kDa)

6.21

Isoelectric Point (pI)

33.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 497
Acc65I GGTACC 2 cut(s) 287, 818
AccB1I GGYRCC 2 cut(s) 287, 818
AciI CCGC 3 cut(s) 276, 309, 926
AclWI GGATC 5 cut(s) 436, 449, 907, 920, 1394
AcsI RAATTY 1 cut(s) 661
AcyI GRCGYC 1 cut(s) 494
AfaI GTAC 7 cut(s) 289, 407, 715, 820, 1139, 1193, 1279
AfiI CCNNNNNNNGG 5 cut(s) 305, 350, 351, 452, 1055
AgsI TTSAA 4 cut(s) 115, 433, 673, 1109
AjnI CCWGG 1 cut(s) 195
AluBI AGCT 4 cut(s) 449, 1073, 1104, 1121
AluI AGCT 4 cut(s) 449, 1073, 1104, 1121
Alw21I GWGCWC 1 cut(s) 504
Alw26I GTCTC 2 cut(s) 127, 1038
AlwI GGATC 5 cut(s) 436, 449, 907, 920, 1394
AlwNI CAGNNNCTG 2 cut(s) 10, 1076
Ama87I CYCGRG 1 cut(s) 260
AoxI GGCC 5 cut(s) 205, 264, 460, 1208, 1339
ApeKI GCWGC 8 cut(s) 200, 545, 616, 923, 1009, 1121, 1199, 1351
ApoI RAATTY 1 cut(s) 661
Asp718I GGTACC 2 cut(s) 287, 818
AspA2I CCTAGG 1 cut(s) 98
AspS9I GGNCC 3 cut(s) 170, 206, 341
AsuC2I CCSGG 2 cut(s) 823, 1196
AsuHPI GGTGA 2 cut(s) 74, 95
AvaI CYCGRG 1 cut(s) 260
AvaII GGWCC 2 cut(s) 170, 341
AvrII CCTAGG 1 cut(s) 98
AxyI CCTNAGG 1 cut(s) 300
BamHI GGATCC 2 cut(s) 441, 912
BanI GGYRCC 2 cut(s) 287, 818
BbsI GAAGAC 1 cut(s) 133
Bbv12I GWGCWC 1 cut(s) 504
BbvI GCAGC 8 cut(s) 187, 532, 628, 910, 996, 1108, 1211, 1363
BccI CCATC 6 cut(s) 277, 534, 621, 851, 900, 985
BceAI ACGGC 1 cut(s) 464
BciT130I CCWGG 1 cut(s) 197
BciVI GTATCC 1 cut(s) 854
BcnI CCSGG 2 cut(s) 823, 1196
BcoDI GTCTC 2 cut(s) 127, 1038
BfaI CTAG 3 cut(s) 99, 215, 1157
BfmI CTRYAG 2 cut(s) 517, 1122
BfuI GTATCC 1 cut(s) 854
BglII AGATCT 1 cut(s) 1417
BisI GCNGC 9 cut(s) 201, 546, 617, 924, 927, 1010, 1122, 1200, 1352
BlnI CCTAGG 1 cut(s) 98
BlpI GCTNAGC 1 cut(s) 1100
BlsI GCNGC 9 cut(s) 202, 547, 618, 925, 928, 1011, 1123, 1201, 1353
Bme1390I CCNGG 3 cut(s) 197, 823, 1196
Bme18I GGWCC 2 cut(s) 170, 341
BmeT110I CYCGRG 1 cut(s) 260
BmgT120I GGNCC 3 cut(s) 170, 206, 341
BmrFI CCNGG 3 cut(s) 197, 823, 1196
BmrI ACTGGG 2 cut(s) 404, 1043
BmsI GCATC 3 cut(s) 55, 1211, 1338
BmuI ACTGGG 2 cut(s) 404, 1043
BpiI GAAGAC 1 cut(s) 133
BpmI CTGGAG 1 cut(s) 1098
Bpu1102I GCTNAGC 1 cut(s) 1100
BpuEI CTTGAG 1 cut(s) 1286
BpuMI CCSGG 2 cut(s) 823, 1196
BsaHI GRCGYC 1 cut(s) 494
BsaI GGTCTC 1 cut(s) 1038
BsaJI CCNNGG 4 cut(s) 98, 261, 822, 916
Bsc4I CCNNNNNNNGG 5 cut(s) 305, 350, 351, 452, 1055
Bse1I ACTGG 5 cut(s) 93, 410, 662, 820, 1049
Bse21I CCTNAGG 1 cut(s) 300
Bse3DI GCAATG 4 cut(s) 39, 51, 64, 936
BseBI CCWGG 1 cut(s) 197
BseDI CCNNGG 4 cut(s) 98, 261, 822, 916
BseGI GGATG 4 cut(s) 375, 545, 951, 996
BseLI CCNNNNNNNGG 5 cut(s) 305, 350, 351, 452, 1055
BseMI GCAATG 4 cut(s) 39, 51, 64, 936
BseMII CTCAG 5 cut(s) 291, 882, 1005, 1083, 1091
BseNI ACTGG 5 cut(s) 93, 410, 662, 820, 1049
BseXI GCAGC 8 cut(s) 187, 532, 628, 910, 996, 1108, 1211, 1363
BseYI CCCAGC 1 cut(s) 445
BshFI GGCC 5 cut(s) 207, 266, 462, 1210, 1341
BshNI GGYRCC 2 cut(s) 287, 818
BsiHKAI GWGCWC 1 cut(s) 504
BsiHKCI CYCGRG 1 cut(s) 260
BsiSI CCGG 2 cut(s) 822, 1196
BslFI GGGAC 4 cut(s) 183, 327, 606, 716
BslI CCNNNNNNNGG 5 cut(s) 305, 350, 351, 452, 1055
BsmAI GTCTC 2 cut(s) 127, 1038
BsmFI GGGAC 4 cut(s) 183, 327, 606, 716
BsmI GAATGC 1 cut(s) 1254
BsnI GGCC 5 cut(s) 207, 266, 462, 1210, 1341
Bso31I GGTCTC 1 cut(s) 1038
BsoBI CYCGRG 1 cut(s) 260
Bsp1286I GDGCHC 1 cut(s) 504
Bsp1407I TGTACA 1 cut(s) 1277
Bsp143I GATC 6 cut(s) 441, 912, 1053, 1335, 1386, 1417
Bsp1720I GCTNAGC 1 cut(s) 1100
BspACI CCGC 3 cut(s) 276, 309, 926
BspANI GGCC 5 cut(s) 207, 266, 462, 1210, 1341
BspCNI CTCAG 5 cut(s) 292, 881, 1006, 1082, 1092
BspMAI CTGCAG 1 cut(s) 1126
BspPI GGATC 5 cut(s) 436, 449, 907, 920, 1394
BspT107I GGYRCC 2 cut(s) 287, 818
BspTNI GGTCTC 1 cut(s) 1038
BsrDI GCAATG 4 cut(s) 39, 51, 64, 936
BsrGI TGTACA 1 cut(s) 1277
BsrI ACTGG 5 cut(s) 93, 410, 662, 820, 1049
BssECI CCNNGG 4 cut(s) 98, 261, 822, 916
BssMI GATC 6 cut(s) 441, 912, 1053, 1335, 1386, 1417
BssNI GRCGYC 1 cut(s) 494
BssT1I CCWWGG 2 cut(s) 98, 916
Bst2UI CCWGG 1 cut(s) 197
Bst4CI ACNGT 4 cut(s) 1142, 1179, 1234, 1282
Bst6I CTCTTC 1 cut(s) 813
BstACI GRCGYC 1 cut(s) 494
BstAUI TGTACA 1 cut(s) 1277
BstC8I GCNNGC 2 cut(s) 205, 307
BstDEI CTNAG 7 cut(s) 11, 300, 380, 868, 1014, 1069, 1100
BstF5I GGATG 4 cut(s) 375, 545, 951, 996
BstKTI GATC 6 cut(s) 444, 915, 1056, 1338, 1389, 1420
BstMAI GTCTC 2 cut(s) 127, 1038
BstMBI GATC 6 cut(s) 441, 912, 1053, 1335, 1386, 1417
BstNI CCWGG 1 cut(s) 197
BstSCI CCNGG 3 cut(s) 195, 821, 1194
BstSFI CTRYAG 2 cut(s) 517, 1122
BstV1I GCAGC 8 cut(s) 187, 532, 628, 910, 996, 1108, 1211, 1363
BstV2I GAAGAC 1 cut(s) 133
BstX2I RGATCY 3 cut(s) 441, 912, 1417
BstXI CCANNNNNNTGG 4 cut(s) 46, 203, 249, 986
BstYI RGATCY 3 cut(s) 441, 912, 1417
Bsu36I CCTNAGG 1 cut(s) 300
BsuI GTATCC 1 cut(s) 854
BsuRI GGCC 5 cut(s) 207, 266, 462, 1210, 1341
BtsCI GGATG 4 cut(s) 375, 545, 951, 996
BtsI GCAGTG 1 cut(s) 973
BtsIMutI CAGTG 4 cut(s) 84, 973, 1056, 1404
Cac8I GCNNGC 2 cut(s) 205, 307
CaiI CAGNNNCTG 2 cut(s) 10, 1076
Cfr13I GGNCC 3 cut(s) 170, 206, 341
CseI GACGC 1 cut(s) 1309
Csp6I GTAC 7 cut(s) 288, 406, 714, 819, 1138, 1192, 1278
CviAII CATG 4 cut(s) 292, 511, 1356, 1424
CviQI GTAC 7 cut(s) 288, 406, 714, 819, 1138, 1192, 1278
DdeI CTNAG 7 cut(s) 11, 300, 380, 868, 1014, 1069, 1100
DpnI GATC 6 cut(s) 443, 914, 1055, 1337, 1388, 1419
DpnII GATC 6 cut(s) 441, 912, 1053, 1335, 1386, 1417
Eam1104I CTCTTC 1 cut(s) 813
EarI CTCTTC 1 cut(s) 813
Eco130I CCWWGG 2 cut(s) 98, 916
Eco147I AGGCCT 1 cut(s) 266
Eco31I GGTCTC 1 cut(s) 1038
Eco47I GGWCC 2 cut(s) 170, 341
Eco81I CCTNAGG 1 cut(s) 300
Eco88I CYCGRG 1 cut(s) 260
EcoO109I RGGNCCY 1 cut(s) 341
EcoRII CCWGG 1 cut(s) 195
EcoT14I CCWWGG 2 cut(s) 98, 916
EcoT22I ATGCAT 1 cut(s) 70
ErhI CCWWGG 2 cut(s) 98, 916
FaeI CATG 4 cut(s) 295, 514, 1359, 1427
FalI AAGNNNNNCTT 2 cut(s) 111, 143
FaqI GGGAC 4 cut(s) 183, 327, 606, 716
FatI CATG 4 cut(s) 291, 510, 1355, 1423
FauNDI CATATG 1 cut(s) 70
Fnu4HI GCNGC 9 cut(s) 201, 546, 617, 924, 927, 1010, 1122, 1200, 1352
FokI GGATG 4 cut(s) 382, 552, 958, 1003
Fsp4HI GCNGC 9 cut(s) 201, 546, 617, 924, 927, 1010, 1122, 1200, 1352
FspBI CTAG 3 cut(s) 99, 215, 1157
GluI GCNGC 9 cut(s) 201, 546, 617, 924, 927, 1010, 1122, 1200, 1352
GsaI CCCAGC 1 cut(s) 449
GsuI CTGGAG 1 cut(s) 1098
HaeIII GGCC 5 cut(s) 207, 266, 462, 1210, 1341
HapII CCGG 2 cut(s) 822, 1196
HgaI GACGC 1 cut(s) 1309
Hin1I GRCGYC 1 cut(s) 494
Hin1II CATG 4 cut(s) 295, 514, 1359, 1427
HincII GTYRAC 1 cut(s) 1447
HindII GTYRAC 1 cut(s) 1447
HinfI GANTC 9 cut(s) 7, 92, 228, 471, 688, 704, 971, 1080, 1153
HpaI GTTAAC 1 cut(s) 1447
HpaII CCGG 2 cut(s) 822, 1196
HphI GGTGA 2 cut(s) 74, 95
Hpy166II GTNNAC 5 cut(s) 86, 655, 716, 852, 1447
Hpy188I TCNGA 4 cut(s) 12, 227, 871, 1325
Hpy188III TCNNGA 7 cut(s) 115, 260, 422, 624, 1077, 1109, 1157
Hpy8I GTNNAC 5 cut(s) 86, 655, 716, 852, 1447
Hpy99I CGWCG 3 cut(s) 334, 499, 1325
HpyAV CCTTC 6 cut(s) 221, 230, 473, 630, 751, 985
HpyCH4III ACNGT 4 cut(s) 1142, 1179, 1234, 1282
HpyCH4IV ACGT 1 cut(s) 494
HpyCH4V TGCA 9 cut(s) 4, 44, 57, 68, 616, 722, 1124, 1254, 1351
HpyF3I CTNAG 7 cut(s) 11, 300, 380, 868, 1014, 1069, 1100
HpySE526I ACGT 1 cut(s) 494
Hsp92I GRCGYC 1 cut(s) 494
Hsp92II CATG 4 cut(s) 295, 514, 1359, 1427
KflI GGGWCCC 1 cut(s) 341
KpnI GGTACC 2 cut(s) 291, 822
KspAI GTTAAC 1 cut(s) 1447
Kzo9I GATC 6 cut(s) 441, 912, 1053, 1335, 1386, 1417
LmnI GCTCC 2 cut(s) 1238, 1325
Lsp1109I GCAGC 8 cut(s) 187, 532, 628, 910, 996, 1108, 1211, 1363
LweI GCATC 3 cut(s) 55, 1211, 1338
MaeI CTAG 3 cut(s) 99, 215, 1157
MaeII ACGT 1 cut(s) 494
MaeIII GTNAC 1 cut(s) 968
MalI GATC 6 cut(s) 443, 914, 1055, 1337, 1388, 1419
MboI GATC 6 cut(s) 441, 912, 1053, 1335, 1386, 1417
MboII GAAGA 4 cut(s) 133, 142, 800, 1412
MflI RGATCY 3 cut(s) 441, 912, 1417
MhlI GDGCHC 1 cut(s) 504
MluCI AATT 5 cut(s) 270, 603, 661, 694, 882
MlyI GAGTC 3 cut(s) 698, 965, 1089
MmeI TCCRAC 5 cut(s) 1003, 1207, 1216, 1286, 1303
Mph1103I ATGCAT 1 cut(s) 70
MseI TTAA 4 cut(s) 269, 1181, 1446, 1454
MslI CAYNNNNRTG 3 cut(s) 44, 479, 509
MspI CCGG 2 cut(s) 822, 1196
MspR9I CCNGG 3 cut(s) 197, 823, 1196
Mva1269I GAATGC 1 cut(s) 1254
MvaI CCWGG 1 cut(s) 197
NciI CCSGG 2 cut(s) 823, 1196
NdeI CATATG 1 cut(s) 70
NdeII GATC 6 cut(s) 441, 912, 1053, 1335, 1386, 1417
NlaIII CATG 4 cut(s) 295, 514, 1359, 1427
NmeAIII GCCGAG 1 cut(s) 1186
NmuCI GTSAC 1 cut(s) 968
NsiI ATGCAT 1 cut(s) 70
PceI AGGCCT 1 cut(s) 266
PctI GAATGC 1 cut(s) 1254
PfeI GAWTC 6 cut(s) 7, 92, 228, 471, 688, 1153
PkrI GCNGC 9 cut(s) 202, 547, 618, 925, 928, 1011, 1123, 1201, 1353
PleI GAGTC 3 cut(s) 698, 965, 1088
PpsI GAGTC 3 cut(s) 698, 965, 1088
PpuMI RGGWCCY 1 cut(s) 341
Psp5II RGGWCCY 1 cut(s) 341
Psp6I CCWGG 1 cut(s) 195
PspFI CCCAGC 1 cut(s) 445
PspGI CCWGG 1 cut(s) 195
PspPI GGNCC 3 cut(s) 170, 206, 341
PspPPI RGGWCCY 1 cut(s) 341
PstI CTGCAG 1 cut(s) 1126
PstNI CAGNNNCTG 2 cut(s) 10, 1076
PsuI RGATCY 3 cut(s) 441, 912, 1417
RsaI GTAC 7 cut(s) 289, 407, 715, 820, 1139, 1193, 1279
RsaNI GTAC 7 cut(s) 288, 406, 714, 819, 1138, 1192, 1278
RseI CAYNNNNRTG 3 cut(s) 44, 479, 509
SaqAI TTAA 4 cut(s) 269, 1181, 1446, 1454
SatI GCNGC 9 cut(s) 201, 546, 617, 924, 927, 1010, 1122, 1200, 1352
Sau3AI GATC 6 cut(s) 441, 912, 1053, 1335, 1386, 1417
Sau96I GGNCC 3 cut(s) 170, 206, 341
SchI GAGTC 3 cut(s) 698, 965, 1089
ScrFI CCNGG 3 cut(s) 197, 823, 1196
SduI GDGCHC 1 cut(s) 504
SfaNI GCATC 3 cut(s) 55, 1211, 1338
SfcI CTRYAG 2 cut(s) 517, 1122
SinI GGWCC 2 cut(s) 170, 341
SmiMI CAYNNNNRTG 3 cut(s) 44, 479, 509
SmlI CTYRAG 1 cut(s) 1301
SmoI CTYRAG 1 cut(s) 1301
Sse9I AATT 5 cut(s) 270, 603, 661, 694, 882
SseBI AGGCCT 1 cut(s) 266
SsiI CCGC 3 cut(s) 276, 309, 926
SspMI CTAG 3 cut(s) 99, 215, 1157
StuI AGGCCT 1 cut(s) 266
StyD4I CCNGG 3 cut(s) 195, 821, 1194
StyI CCWWGG 2 cut(s) 98, 916
TaaI ACNGT 4 cut(s) 1142, 1179, 1234, 1282
TaiI ACGT 1 cut(s) 497
TaqI TCGA 2 cut(s) 623, 707
TasI AATT 5 cut(s) 270, 603, 661, 694, 882
TatI WGTACW 3 cut(s) 713, 1137, 1277
TauI GCSGC 1 cut(s) 929
TfiI GAWTC 6 cut(s) 7, 92, 228, 471, 688, 1153
Tru1I TTAA 4 cut(s) 269, 1181, 1446, 1454
Tru9I TTAA 4 cut(s) 269, 1181, 1446, 1454
TscAI CASTG 4 cut(s) 84, 973, 1056, 1411
TseFI GTSAC 1 cut(s) 968
TseI GCWGC 8 cut(s) 200, 545, 616, 923, 1009, 1121, 1199, 1351
Tsp45I GTSAC 1 cut(s) 968
TspDTI ATGAA 3 cut(s) 386, 527, 1412
TspRI CASTG 4 cut(s) 84, 973, 1056, 1411
VpaK11BI GGWCC 2 cut(s) 170, 341
XapI RAATTY 1 cut(s) 661
XbaI TCTAGA 1 cut(s) 1156
XmaJI CCTAGG 1 cut(s) 98
XspI CTAG 3 cut(s) 99, 215, 1157
ZraI GACGTC 1 cut(s) 495
Zsp2I ATGCAT 1 cut(s) 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.