Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001720

Physical Location & Seq

Genomic Coordinates Forward (+)

38930176 .. 38933721

Gene Structure 3546 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00245800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGTCGTCGTCGATGGTCGCTTTGAAGTCGGTTTGATTGGCTTTGCTTCTTGCCACCTCCTTCTTGGTAGAGAACTCGAGCCTTGGACGATCCAATCTTCGGTGGCGACGGTTAGTGAAGATGGAATGGGTTTTGATTTTGACGGTGGTGGTGGAGCAAATGTTCTGCTTTTCTCCGGAGTGGCTAGTCATGGATGCTTGATCGCCGGTTGTACTTGGTGTGGCCGCATCAATGGAATTGGGGTGGCTGCAATGGCTTTGGTGGCGACACCAATGATCGTTCCATTGAAGCATCCAACTTTATTGGCCAATTTCAAGAGACCCATCTGGCCATCTCTATTGCTGAAGTTCGTCTTCATGTACATGTCTGTTTTTCTGAATGATTACTATGTAAAGAAATTGAGGACTGCAGCAACTAGGGAAGGCTCCATTGAAATGGGAGAGCACAACAATCCCGAATATGTTGCAGTTAGTGAAGCACAATCCCCTAGGGTAAAAAACTTCAAGAAAGTCTCAGTTCTGCCCCTTGTCTTCCTCATCTTCTATGAGGTATCTGGGGGTCCATTTGGTATTGAGGACAGTGTTCAGGCTGCCGGTCCCCTTCTAGCGCTTCTCGGGTTCTTGGTCTTTCCATTCATTTGGAGTGTTCCTGAGGCCTTGATTACTGCAGAGATGGGTACCATGTTCCCTGTGAATGGGGGTTATGTGGTTTGGGTTTCTTCGGCCCTGGGTCCATTTTGGGGGTTTCAACAAGGATGGGTGAAATGGTTAAGTGGAGTCATTGATAATGCTTTGTATCCAGTTCTGTTTTTGGACTACTTGAAATCAGCAATACCAGCTTTAGGCGGTGGACTTCCAAGAATCGTGGCAGTGTTAGCTTTGACATTGTTCCTCACTTACTTAAACTATAGGGGTTTAACCATTGTGGGATGGGTTGCTGTACTTTTAGGGATTTTCTCAATCATTCCTTTTGTGGTTATGGGACTTGTGGCAATTCCCAAGTTGGAGCCTTCAAGATGGTTAGTGGTGAGTCTACATAATGTGGACTGGAATTTGTATTTGAACACTCTCTTTTGGAATTTGAACTATTGGGATTCTATAAGTACACTTGCCGGAGAGGTGGAGAACCCAAAGAAAACTCTCCCCAAGGCTCTTTTTTATGCGTTGATTTTGGTTGTTGTGGGATATTTCTTCCCCCTTTTAATTGGTACTGGGGCTGTTCCACTTGATCGTGAGTTGTGGACTGATGGTTACTTCTCTGATATTGCAAAAATTATTGGGGGAGTTTGGTTGAGATGTTGGCTCCAAGTGGCTGCGGCGATGTCAAATATGGGGATGTTTGTGGCTGAAATGAGCAGTGACTCTTTTCAACTTCTTGGGATGGCAGAAAGAGGGATGTTGCCTGAGTTCTTTGGTAAGCGGTCTCGTTATGGAACCCCAGTCATTGGCATTATGTTCTCAGCTTCCGGAGTCCTTTTGCTATCTTGGCTAAGCTTTCAAGAGATTGTAGCTGCAGAAAACTTCTTGTACTGTGTTGGAATGATTTTGGAGTTCATAGCATTTATACTATTACGAGTGAAGCATCCAGCTGCATCTCGACCTTACAAAATTCCTGTTGGAACAGTTGGAACTGTTCTTTTGTGCATTCCGCCAACTCTACTAATTGGTGTAGTGTTGGCTCTTTCACAACTCAAGGTGGTAGTTGTGAGCCTTATAGCTATAGTGATTGGCCTTGTGATGCAGCCCTGCCTCACATATGTTGAGAGGAAGAGGTGGATGAAGTTCTCCATCAGTTCTGATCTCCCAGATCTTCATGGTGCTAATCAGGAGAGTGTCAACTCCATAATAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006082 GO:0006520 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0006928 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015171 GO:0015179 GO:0015203 GO:0015291 GO:0015297 GO:0015318 GO:0015711 GO:0015807 GO:0015846 GO:0015849 GO:0016020 GO:0016021 GO:0016043 GO:0016477 GO:0019752 GO:0022607 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0040011 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0048870 GO:0050900 GO:0051179 GO:0051234 GO:0051674 GO:0055085 GO:0065003 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0098656 GO:1901564 GO:1902047 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2

Protein Analysis

617

Amino Acids

67.6

Weight (kDa)

6.41

Isoelectric Point (pI)

36.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	174 - 555	1.2e-38	Amino acid permease
AA_permease	PF00324	191 - 561	3.9e-20	Amino acid permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31820 AT1G31830 AT1G31830 AT5G05630
fragaria_vesca	FvH4_2g15680 FvH4_2g15680 FvH4_4g35270 FvH4_5g24050 FvH4_5g24050
malus_domestica	MD06G1016700.v1.1 MD17G1241900.v1.1
prunus_persica	Prupe.5G019700_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1
pyrus_communis	pycom05g11950 pycom06g01360 pycom10g10980
rosa_chinensis	RchiOBHm_Chr6g0278981 RchiOBHm_Chr7g0213541 RchiOBHm_Chr7g0243451
rosa_laevigata	RLG00000002797 RLG00000013178
rosa_multiflora	Rmu_co8436609.1_g000001 Rmu_sc0002080.1_g000041 Rmu_sc0008539.1_g000001 Rmu_sc0009618.1_g000016 Rmu_sc0010076.1_g000001
rosa_roxburghii	Rroxscaffold_3G00245800 Rroxscaffold_7G00189290
rosa_rugosa	Rorug06G0120600 Rorug07G0142700 Rorug07G0142800 Rorug07G0319500
rosa_samantha	Rh6AG229300 Rh6BG234500 Rh6CG236700 Rh6DG228300 Rh7AG276000 Rh7BG270400 Rh7BG445400 Rh7CG294900 Rh7DG282600
rosa_wichuraiana	Rw0G023490 Rw6G020080 Rw7G023850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	677
AccB1I	GGYRCC	1 cut(s)	677
AccB7I	CCANNNNNTGG	1 cut(s)	1445
AccI	GTMKAC	1 cut(s)	1033
AccIII	TCCGGA	2 cut(s)	176, 1466
AciI	CCGC	5 cut(s)	226, 846, 1316, 1420, 1649
AclWI	GGATC	1 cut(s)	85
AcoI	YGGCCR	3 cut(s)	223, 306, 329
AcsI	RAATTY	3 cut(s)	1051, 1078, 1608
AcuI	CTGAAG	1 cut(s)	365
AfaI	GTAC	7 cut(s)	214, 362, 679, 942, 1105, 1210, 1529
AfeI	AGCGCT	1 cut(s)	609
AfiI	CCNNNNNNNGG	5 cut(s)	100, 695, 740, 842, 1445
AflIII	ACRYGT	1 cut(s)	363
AjnI	CCWGG	1 cut(s)	726
AloI	GAACNNNNNNTCC	2 cut(s)	147, 179
AluBI	AGCT	7 cut(s)	839, 878, 1463, 1494, 1511, 1589, 1718
AluI	AGCT	7 cut(s)	839, 878, 1463, 1494, 1511, 1589, 1718
Alw21I	GWGCWC	1 cut(s)	447
Alw26I	GTCTC	3 cut(s)	313, 517, 1428
AlwI	GGATC	1 cut(s)	85
Ama87I	CYCGRG	2 cut(s)	77, 614
Aor13HI	TCCGGA	2 cut(s)	176, 1466
Aor51HI	AGCGCT	1 cut(s)	609
AoxI	GGCC	6 cut(s)	223, 306, 329, 654, 723, 1729
ApeKI	GCWGC	7 cut(s)	248, 410, 590, 1313, 1511, 1589, 1741
ApoI	RAATTY	3 cut(s)	1051, 1078, 1608
Asp718I	GGTACC	1 cut(s)	677
AspA2I	CCTAGG	1 cut(s)	488
AspLEI	GCGC	1 cut(s)	610
AspS9I	GGNCC	4 cut(s)	560, 596, 724, 731
AsuHPI	GGTGA	2 cut(s)	772, 1039
AvaI	CYCGRG	2 cut(s)	77, 614
AvaII	GGWCC	3 cut(s)	560, 596, 731
AvrII	CCTAGG	1 cut(s)	488
AxyI	CCTNAGG	1 cut(s)	651
BalI	TGGCCA	2 cut(s)	308, 331
BanI	GGYRCC	1 cut(s)	677
BbsI	GAAGAC	2 cut(s)	346, 523
Bbv12I	GWGCWC	1 cut(s)	447
BbvI	GCAGC	7 cut(s)	235, 422, 577, 1300, 1498, 1576, 1753
BcgI	CGANNNNNNTGC	2 cut(s)	446, 480
BciT130I	CCWGG	1 cut(s)	728
BciVI	GTATCC	1 cut(s)	807
BcoDI	GTCTC	3 cut(s)	313, 517, 1428
BfaI	CTAG	4 cut(s)	186, 417, 489, 605
BfmI	CTRYAG	5 cut(s)	408, 666, 907, 1512, 1719
BfoI	RGCGCY	1 cut(s)	611
BfuI	GTATCC	1 cut(s)	807
BglII	AGATCT	1 cut(s)	1807
BisI	GCNGC	9 cut(s)	226, 249, 411, 591, 1314, 1317, 1512, 1590, 1742
BlnI	CCTAGG	1 cut(s)	488
BlpI	GCTNAGC	1 cut(s)	1490
BlsI	GCNGC	9 cut(s)	227, 250, 412, 592, 1315, 1318, 1513, 1591, 1743
Bme1390I	CCNGG	1 cut(s)	728
Bme18I	GGWCC	3 cut(s)	560, 596, 731
BmeT110I	CYCGRG	2 cut(s)	77, 614
BmgT120I	GGNCC	4 cut(s)	560, 596, 724, 731
BmiI	GGNNCC	8 cut(s)	427, 561, 598, 679, 732, 1008, 1304, 1435
BmrFI	CCNGG	1 cut(s)	728
BmrI	ACTGGG	2 cut(s)	1221, 1433
BmsI	GCATC	6 cut(s)	185, 237, 301, 1591, 1601, 1728
BmuI	ACTGGG	2 cut(s)	1221, 1433
BpiI	GAAGAC	2 cut(s)	346, 523
Bpu1102I	GCTNAGC	1 cut(s)	1490
BpuEI	CTTGAG	1 cut(s)	1676
BsaI	GGTCTC	2 cut(s)	313, 1428
BsaJI	CCNNGG	5 cut(s)	83, 488, 726, 727, 1146
BsaWI	WCCGGW	2 cut(s)	176, 1466
BsaXI	ACNNNNNCTCC	2 cut(s)	147, 177
Bsc4I	CCNNNNNNNGG	5 cut(s)	100, 695, 740, 842, 1445
Bse118I	RCCGGY	2 cut(s)	206, 593
Bse1I	ACTGG	4 cut(s)	800, 1052, 1216, 1439
Bse21I	CCTNAGG	1 cut(s)	651
Bse3DI	GCAATG	1 cut(s)	258
BseAI	TCCGGA	2 cut(s)	176, 1466
BseBI	CCWGG	1 cut(s)	728
BseDI	CCNNGG	5 cut(s)	83, 488, 726, 727, 1146
BseGI	GGATG	9 cut(s)	200, 292, 761, 935, 1341, 1386, 1401, 1582, 1782
BseLI	CCNNNNNNNGG	5 cut(s)	100, 695, 740, 842, 1445
BseMI	GCAATG	1 cut(s)	258
BseMII	CTCAG	4 cut(s)	528, 642, 1395, 1473
BseNI	ACTGG	4 cut(s)	800, 1052, 1216, 1439
BseXI	GCAGC	7 cut(s)	235, 422, 577, 1300, 1498, 1576, 1753
BshFI	GGCC	6 cut(s)	225, 308, 331, 656, 725, 1731
BshNI	GGYRCC	1 cut(s)	677
BsiHKAI	GWGCWC	1 cut(s)	447
BsiHKCI	CYCGRG	2 cut(s)	77, 614
BsiSI	CCGG	5 cut(s)	177, 207, 594, 1113, 1467
BslFI	GGGAC	2 cut(s)	582, 996
BslI	CCNNNNNNNGG	5 cut(s)	100, 695, 740, 842, 1445
BsmAI	GTCTC	3 cut(s)	313, 517, 1428
BsmFI	GGGAC	2 cut(s)	582, 996
BsmI	GAATGC	1 cut(s)	1644
BsnI	GGCC	6 cut(s)	225, 308, 331, 656, 725, 1731
Bso31I	GGTCTC	2 cut(s)	313, 1428
BsoBI	CYCGRG	2 cut(s)	77, 614
Bsp1286I	GDGCHC	1 cut(s)	447
Bsp13I	TCCGGA	2 cut(s)	176, 1466
Bsp1407I	TGTACA	1 cut(s)	360
Bsp143I	GATC	6 cut(s)	90, 201, 276, 1228, 1798, 1807
Bsp1720I	GCTNAGC	1 cut(s)	1490
BspACI	CCGC	5 cut(s)	226, 846, 1316, 1420, 1649
BspANI	GGCC	6 cut(s)	225, 308, 331, 656, 725, 1731
BspCNI	CTCAG	4 cut(s)	527, 643, 1396, 1472
BspEI	TCCGGA	2 cut(s)	176, 1466
BspLI	GGNNCC	8 cut(s)	427, 561, 598, 679, 732, 1008, 1304, 1435
BspMAI	CTGCAG	3 cut(s)	412, 670, 1516
BspPI	GGATC	1 cut(s)	85
BspT107I	GGYRCC	1 cut(s)	677
BspTNI	GGTCTC	2 cut(s)	313, 1428
BsrDI	GCAATG	1 cut(s)	258
BsrFI	RCCGGY	2 cut(s)	206, 593
BsrGI	TGTACA	1 cut(s)	360
BsrI	ACTGG	4 cut(s)	800, 1052, 1216, 1439
BssAI	RCCGGY	2 cut(s)	206, 593
BssECI	CCNNGG	5 cut(s)	83, 488, 726, 727, 1146
BssMI	GATC	6 cut(s)	90, 201, 276, 1228, 1798, 1807
BssT1I	CCWWGG	3 cut(s)	83, 488, 1146
Bst2UI	CCWGG	1 cut(s)	728
Bst4CI	ACNGT	6 cut(s)	112, 146, 581, 1532, 1624, 1633
Bst6I	CTCTTC	1 cut(s)	1763
BstAUI	TGTACA	1 cut(s)	360
BstDEI	CTNAG	5 cut(s)	514, 651, 1404, 1459, 1490
BstF5I	GGATG	9 cut(s)	200, 292, 761, 935, 1341, 1386, 1401, 1582, 1782
BstH2I	RGCGCY	1 cut(s)	611
BstHHI	GCGC	1 cut(s)	610
BstKTI	GATC	6 cut(s)	93, 204, 279, 1231, 1801, 1810
BstMAI	GTCTC	3 cut(s)	313, 517, 1428
BstMBI	GATC	6 cut(s)	90, 201, 276, 1228, 1798, 1807
BstMWI	GCNNNNNNNGC	5 cut(s)	254, 263, 836, 875, 1486
BstNI	CCWGG	1 cut(s)	728
BstNSI	RCATGY	1 cut(s)	367
BstSCI	CCNGG	1 cut(s)	726
BstSFI	CTRYAG	5 cut(s)	408, 666, 907, 1512, 1719
BstV1I	GCAGC	7 cut(s)	235, 422, 577, 1300, 1498, 1576, 1753
BstV2I	GAAGAC	2 cut(s)	346, 523
BstX2I	RGATCY	1 cut(s)	1807
BstXI	CCANNNNNNTGG	2 cut(s)	436, 639
BstYI	RGATCY	1 cut(s)	1807
Bsu36I	CCTNAGG	1 cut(s)	651
BsuI	GTATCC	1 cut(s)	807
BsuRI	GGCC	6 cut(s)	225, 308, 331, 656, 725, 1731
BtgZI	GCGATG	1 cut(s)	1334
BtsCI	GGATG	9 cut(s)	200, 292, 761, 935, 1341, 1386, 1401, 1582, 1782
BtsI	GCAGTG	2 cut(s)	876, 1363
BtsIMutI	CAGTG	3 cut(s)	586, 876, 1363
CfoI	GCGC	1 cut(s)	610
Cfr10I	RCCGGY	2 cut(s)	206, 593
Cfr13I	GGNCC	4 cut(s)	560, 596, 724, 731
Csp6I	GTAC	7 cut(s)	213, 361, 678, 941, 1104, 1209, 1528
CspCI	CAANNNNNGTGG	2 cut(s)	846, 881
CviAII	CATG	5 cut(s)	191, 358, 364, 682, 1814
CviQI	GTAC	7 cut(s)	213, 361, 678, 941, 1104, 1209, 1528
DdeI	CTNAG	5 cut(s)	514, 651, 1404, 1459, 1490
DpnI	GATC	6 cut(s)	92, 203, 278, 1230, 1800, 1809
DpnII	GATC	6 cut(s)	90, 201, 276, 1228, 1798, 1807
EaeI	YGGCCR	3 cut(s)	223, 306, 329
Eam1104I	CTCTTC	1 cut(s)	1763
EarI	CTCTTC	1 cut(s)	1763
EciI	GGCGGA	1 cut(s)	1638
Eco130I	CCWWGG	3 cut(s)	83, 488, 1146
Eco147I	AGGCCT	1 cut(s)	656
Eco31I	GGTCTC	2 cut(s)	313, 1428
Eco47I	GGWCC	3 cut(s)	560, 596, 731
Eco47III	AGCGCT	1 cut(s)	609
Eco57I	CTGAAG	1 cut(s)	365
Eco81I	CCTNAGG	1 cut(s)	651
Eco88I	CYCGRG	2 cut(s)	77, 614
EcoRII	CCWGG	1 cut(s)	726
EcoT14I	CCWWGG	3 cut(s)	83, 488, 1146
ErhI	CCWWGG	3 cut(s)	83, 488, 1146
FaeI	CATG	5 cut(s)	194, 361, 367, 685, 1817
FalI	AAGNNNNNCTT	2 cut(s)	338, 370
FaqI	GGGAC	2 cut(s)	582, 996
FatI	CATG	5 cut(s)	190, 357, 363, 681, 1813
FauNDI	CATATG	1 cut(s)	1756
FblI	GTMKAC	1 cut(s)	1033
Fnu4HI	GCNGC	9 cut(s)	226, 249, 411, 591, 1314, 1317, 1512, 1590, 1742
FokI	GGATG	9 cut(s)	207, 279, 768, 942, 1348, 1393, 1408, 1569, 1789
Fsp4HI	GCNGC	9 cut(s)	226, 249, 411, 591, 1314, 1317, 1512, 1590, 1742
FspBI	CTAG	4 cut(s)	186, 417, 489, 605
GlaI	GCGC	1 cut(s)	609
GluI	GCNGC	9 cut(s)	226, 249, 411, 591, 1314, 1317, 1512, 1590, 1742
HaeII	RGCGCY	1 cut(s)	611
HaeIII	GGCC	6 cut(s)	225, 308, 331, 656, 725, 1731
HapII	CCGG	5 cut(s)	177, 207, 594, 1113, 1467
HhaI	GCGC	1 cut(s)	610
Hin1II	CATG	5 cut(s)	194, 361, 367, 685, 1817
Hin6I	GCGC	1 cut(s)	608
HinP1I	GCGC	1 cut(s)	608
HincII	GTYRAC	1 cut(s)	1837
HindII	GTYRAC	1 cut(s)	1837
HindIII	AAGCTT	1 cut(s)	1492
HinfI	GANTC	6 cut(s)	777, 861, 1030, 1094, 1361, 1470
HpaII	CCGG	5 cut(s)	177, 207, 594, 1113, 1467
HphI	GGTGA	2 cut(s)	772, 1039
Hpy166II	GTNNAC	6 cut(s)	851, 1034, 1045, 1106, 1242, 1837
Hpy188I	TCNGA	3 cut(s)	378, 1261, 1798
Hpy8I	GTNNAC	6 cut(s)	851, 1034, 1045, 1106, 1242, 1837
Hpy99I	CGWCG	3 cut(s)	11, 14, 112
HpyAV	CCTTC	4 cut(s)	71, 416, 611, 1020
HpyCH4III	ACNGT	6 cut(s)	112, 146, 581, 1532, 1624, 1633
HpyCH4V	TGCA	9 cut(s)	251, 410, 467, 668, 1268, 1514, 1592, 1644, 1741
HpyF10VI	GCNNNNNNNGC	5 cut(s)	254, 263, 836, 875, 1486
HpyF3I	CTNAG	5 cut(s)	514, 651, 1404, 1459, 1490
Hsp92II	CATG	5 cut(s)	194, 361, 367, 685, 1817
HspAI	GCGC	1 cut(s)	608
Kpn2I	TCCGGA	2 cut(s)	176, 1466
KpnI	GGTACC	1 cut(s)	681
Kzo9I	GATC	6 cut(s)	90, 201, 276, 1228, 1798, 1807
LmnI	GCTCC	4 cut(s)	155, 431, 1006, 1308
Lsp1109I	GCAGC	7 cut(s)	235, 422, 577, 1300, 1498, 1576, 1753
LweI	GCATC	6 cut(s)	185, 237, 301, 1591, 1601, 1728
MaeI	CTAG	4 cut(s)	186, 417, 489, 605
MaeIII	GTNAC	2 cut(s)	1250, 1358
MalI	GATC	6 cut(s)	92, 203, 278, 1230, 1800, 1809
MboI	GATC	6 cut(s)	90, 201, 276, 1228, 1798, 1807
MboII	GAAGA	9 cut(s)	90, 131, 346, 523, 532, 711, 1183, 1780, 1802
MflI	RGATCY	1 cut(s)	1807
MhlI	GDGCHC	1 cut(s)	447
MlsI	TGGCCA	2 cut(s)	308, 331
MluNI	TGGCCA	2 cut(s)	308, 331
MlyI	GAGTC	4 cut(s)	786, 1039, 1355, 1479
MmeI	TCCRAC	5 cut(s)	320, 984, 1516, 1597, 1606
Mox20I	TGGCCA	2 cut(s)	308, 331
MroI	TCCGGA	2 cut(s)	176, 1466
MscI	TGGCCA	2 cut(s)	308, 331
MseI	TTAA	4 cut(s)	770, 902, 917, 1202
MslI	CAYNNNNRTG	2 cut(s)	362, 434
Msp20I	TGGCCA	2 cut(s)	308, 331
MspA1I	CMGCKG	1 cut(s)	1589
MspI	CCGG	5 cut(s)	177, 207, 594, 1113, 1467
MspR9I	CCNGG	1 cut(s)	728
Mva1269I	GAATGC	1 cut(s)	1644
MvaI	CCWGG	1 cut(s)	728
MwoI	GCNNNNNNNGC	5 cut(s)	254, 263, 836, 875, 1486
NdeI	CATATG	1 cut(s)	1756
NdeII	GATC	6 cut(s)	90, 201, 276, 1228, 1798, 1807
NlaIII	CATG	5 cut(s)	194, 361, 367, 685, 1817
NlaIV	GGNNCC	8 cut(s)	427, 561, 598, 679, 732, 1008, 1304, 1435
NmuCI	GTSAC	1 cut(s)	1358
NspI	RCATGY	1 cut(s)	367
PaeR7I	CTCGAG	1 cut(s)	77
PasI	CCCWGGG	1 cut(s)	727
PceI	AGGCCT	1 cut(s)	656
PciI	ACATGT	1 cut(s)	363
PctI	GAATGC	1 cut(s)	1644
PfeI	GAWTC	2 cut(s)	861, 1094
PflMI	CCANNNNNTGG	1 cut(s)	1445
PkrI	GCNGC	9 cut(s)	227, 250, 412, 592, 1315, 1318, 1513, 1591, 1743
PleI	GAGTC	4 cut(s)	785, 1038, 1355, 1478
PpsI	GAGTC	4 cut(s)	785, 1038, 1355, 1478
PscI	ACATGT	1 cut(s)	363
Psp6I	CCWGG	1 cut(s)	726
PspGI	CCWGG	1 cut(s)	726
PspN4I	GGNNCC	8 cut(s)	427, 561, 598, 679, 732, 1008, 1304, 1435
PspPI	GGNCC	4 cut(s)	560, 596, 724, 731
PspXI	VCTCGAGB	1 cut(s)	77
PstI	CTGCAG	3 cut(s)	412, 670, 1516
PsuI	RGATCY	1 cut(s)	1807
PvuII	CAGCTG	1 cut(s)	1589
RsaI	GTAC	7 cut(s)	214, 362, 679, 942, 1105, 1210, 1529
RsaNI	GTAC	7 cut(s)	213, 361, 678, 941, 1104, 1209, 1528
RseI	CAYNNNNRTG	2 cut(s)	362, 434
SaqAI	TTAA	4 cut(s)	770, 902, 917, 1202
SatI	GCNGC	9 cut(s)	226, 249, 411, 591, 1314, 1317, 1512, 1590, 1742
Sau3AI	GATC	6 cut(s)	90, 201, 276, 1228, 1798, 1807
Sau96I	GGNCC	4 cut(s)	560, 596, 724, 731
SchI	GAGTC	4 cut(s)	786, 1039, 1355, 1479
ScrFI	CCNGG	1 cut(s)	728
SduI	GDGCHC	1 cut(s)	447
SfaNI	GCATC	6 cut(s)	185, 237, 301, 1591, 1601, 1728
SfcI	CTRYAG	5 cut(s)	408, 666, 907, 1512, 1719
Sfr274I	CTCGAG	1 cut(s)	77
SinI	GGWCC	3 cut(s)	560, 596, 731
SlaI	CTCGAG	1 cut(s)	77
SmiMI	CAYNNNNRTG	2 cut(s)	362, 434
SmlI	CTYRAG	2 cut(s)	77, 1691
SmoI	CTYRAG	2 cut(s)	77, 1691
SseBI	AGGCCT	1 cut(s)	656
SsiI	CCGC	5 cut(s)	226, 846, 1316, 1420, 1649
SspMI	CTAG	4 cut(s)	186, 417, 489, 605
StuI	AGGCCT	1 cut(s)	656
StyD4I	CCNGG	1 cut(s)	726
StyI	CCWWGG	3 cut(s)	83, 488, 1146
TaaI	ACNGT	6 cut(s)	112, 146, 581, 1532, 1624, 1633
TaqI	TCGA	3 cut(s)	12, 78, 1597
TatI	WGTACW	5 cut(s)	212, 360, 940, 1103, 1527
TauI	GCSGC	2 cut(s)	228, 1319
TfiI	GAWTC	2 cut(s)	861, 1094
Tru1I	TTAA	4 cut(s)	770, 902, 917, 1202
Tru9I	TTAA	4 cut(s)	770, 902, 917, 1202
TscAI	CASTG	3 cut(s)	586, 876, 1363
TseFI	GTSAC	1 cut(s)	1358
TseI	GCWGC	7 cut(s)	248, 410, 590, 1313, 1511, 1589, 1741
Tsp45I	GTSAC	1 cut(s)	1358
TspDTI	ATGAA	5 cut(s)	346, 625, 1543, 1793, 1802
TspRI	CASTG	3 cut(s)	586, 876, 1363
Van91I	CCANNNNNTGG	1 cut(s)	1445
VpaK11BI	GGWCC	3 cut(s)	560, 596, 731
XapI	RAATTY	3 cut(s)	1051, 1078, 1608
XceI	RCATGY	1 cut(s)	367
XcmI	CCANNNNNNNNNTGG	1 cut(s)	62
XhoI	CTCGAG	1 cut(s)	77
XmaJI	CCTAGG	1 cut(s)	488
XmiI	GTMKAC	1 cut(s)	1033
XspI	CTAG	4 cut(s)	186, 417, 489, 605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.