Prupe.8G169300_v2.0.a1

polyamine transporter At1g31830 isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
17422217 .. 17425154
2938 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G169300.5

Sequence Viewer

Length: 1461 bp
ATGAAACATAGAAACTCACTTGCAAAGCAAAGTAATGCTAAAATGTTGGACAACAATATTCCTGAGTATGTTGGTTTGGGGGAAGGGTCCTCTCACAACTTGCAGAAGTACCAGAAGGTTTCAGTTATACCTCTTGTATTCTTGATCTTCTATGAGGTCTCGGGAGGGCCATTTGGCATCGAAGACAGTGTCCAGGCAGCCGGTCCCCTTTTAGCCCTTCTTGGTTTTCTGGTTTTTGCAATCATATGGAGTGTTCCAGAGGCCTTGATAACTGCAGAAATGGGTACTATGTTCCCTGAGAATGGAGGGTATGTTGTTTGGGTCTCATCAGCTTTGGGTCCATATTGGGGCTTTCAGCAAGGTTGGATGAAATGGCTTAGTGGGGTAATTGATAATGCTCTATACCCTGTTCTGTTTCTGGACTATCTGAAATCAGCAATTCCAGCTTTGGAAAGTGGTCTCCCAAGGACAATTGCAGTGTTGGTTTTGACTGCGATTCTCACTTACATGAACTACAGGGGTTTAACAATAGTGGGTTGGGCTGCTATCTTGCTGGGGGTGTTTTCACTTCTTCCTTTCATATTCATGGGATTTATAGCAATCCCGAAGATAAATCCTTCCAGGTGGTTTTTGGTAAATCTGGACAGCGTAAATTGGACTTTGTATTTGAACACTCTGTTCTGGAATCTTAATTACTGGGATTCCATTAGTACTCTATCAGGGGAGGTGGAAAACCCCGGTACAACTCTTCCGAAAGCTCTCTTTTATGCTCTTATCTTGGTTGTGTTTGGATACATTTTCCCCCTTCTGATCGGTACTGGAGCTGTTCCAGTTGATCGTGATCTGTGGTCTGATGGTTATTTCGCAGACATTGCTAAAATGCTTGGAGGTGTATGGTTACGATTCTGGGTCCTAGCAGCATCTGCATTGTCAAACATGGGTATGTTTGTGGCTGAAATGAGCAGCGACTCCTTTCAACTTCTGGGTATGGCAGAACGTGGGATGCTTCCTTCAATCTTTGCCAAAAGATCTCGTCATGGTACTCCTCTTGTTGGAATTTTATTCTCTGCATCGGGCGTTATTTTGCTCTCGTGGTTGAGCTTCCAAGAGATCGTAGCCGCGGAGAACTACTTGTATTGCTTCGGAATGATTATGGAATTCATTGCATTTGTGAAGTTGAGGATGAAACACCCAGCTGCATCGCGGCCGTTTAAGATACCTGTTGGTACTGCCGGAGCGATTTTGATCTGCATTCCTCCGACACTGTTAATTTTTGTAGTTTTAGCTCTTGCTTCTCCAAAGGTGATGGCTATAAGCATCTCTGCTGTGATCATTGGGCTTGTTCTGCAGCCTTGTGTTGAGTACACAAAAAGAAATAGATGGTTTAATTTCTCCATGAATTCTGACCTTCCAGATATCCATGCTCCAGATCATCAGTGTAACGAACCTTGGATTTCATGA

Protein Analysis

487

Amino Acids

53.74

Weight (kDa)

6.32

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 1121, 1204
AciI CCGC 3 cut(s) 1119, 1121, 1204
AcoI YGGCCR 1 cut(s) 1205
AcsI RAATTY 3 cut(s) 1056, 1157, 1399
AfaI GTAC 8 cut(s) 110, 286, 712, 742, 817, 1042, 1228, 1364
AfiI CCNNNNNNNGG 3 cut(s) 302, 347, 1052
AgsI TTSAA 3 cut(s) 670, 977, 1014
AjnI CCWGG 2 cut(s) 192, 620
AluBI AGCT 7 cut(s) 332, 446, 758, 824, 1101, 1196, 1286
AluI AGCT 7 cut(s) 332, 446, 758, 824, 1101, 1196, 1286
Alw26I GTCTC 3 cut(s) 163, 328, 464
AlwNI CAGNNNCTG 1 cut(s) 923
Ama87I CYCGRG 1 cut(s) 160
AoxI GGCC 3 cut(s) 167, 261, 1205
ApeKI GCWGC 6 cut(s) 197, 542, 917, 963, 1196, 1348
ApoI RAATTY 3 cut(s) 1056, 1157, 1399
ArsI GACNNNNNNTTYG 4 cut(s) 174, 206, 649, 681
AspS9I GGNCC 5 cut(s) 87, 167, 203, 338, 910
AsuC2I CCSGG 1 cut(s) 738
AsuHPI GGTGA 1 cut(s) 1315
AvaI CYCGRG 1 cut(s) 160
AvaII GGWCC 4 cut(s) 87, 203, 338, 910
BauI CACGAG 1 cut(s) 1090
BbsI GAAGAC 1 cut(s) 189
BbvI GCAGC 6 cut(s) 209, 529, 929, 975, 1183, 1360
BccI CCATC 3 cut(s) 848, 1300, 1374
BceAI ACGGC 1 cut(s) 1192
BciT130I CCWGG 2 cut(s) 194, 622
BciVI GTATCC 1 cut(s) 785
BclI TGATCA 1 cut(s) 1329
BcnI CCSGG 1 cut(s) 738
BcoDI GTCTC 3 cut(s) 163, 328, 464
BfaI CTAG 1 cut(s) 914
BfmI CTRYAG 3 cut(s) 273, 514, 1346
BfuI GTATCC 1 cut(s) 785
BglII AGATCT 1 cut(s) 1028
BisI GCNGC 8 cut(s) 198, 543, 918, 964, 1119, 1197, 1205, 1349
BlsI GCNGC 8 cut(s) 199, 544, 919, 965, 1120, 1198, 1206, 1350
BmcAI AGTACT 1 cut(s) 712
Bme1390I CCNGG 3 cut(s) 194, 622, 738
Bme18I GGWCC 4 cut(s) 87, 203, 338, 910
BmeT110I CYCGRG 1 cut(s) 160
BmgT120I GGNCC 5 cut(s) 87, 167, 203, 338, 910
BmiI GGNNCC 4 cut(s) 88, 205, 339, 911
BmrFI CCNGG 3 cut(s) 194, 622, 738
BmrI ACTGGG 1 cut(s) 706
BmsI GCATC 6 cut(s) 186, 929, 993, 1079, 1208, 1326
BmuI ACTGGG 1 cut(s) 706
BpiI GAAGAC 1 cut(s) 189
BpmI CTGGAG 2 cut(s) 840, 1410
BpuMI CCSGG 1 cut(s) 738
BsaBI GATNNNNATC 2 cut(s) 840, 1244
BsaI GGTCTC 3 cut(s) 163, 328, 464
BsaJI CCNNGG 4 cut(s) 464, 736, 1119, 1448
BsaXI ACNNNNNCTCC 2 cut(s) 297, 327
Bsc4I CCNNNNNNNGG 3 cut(s) 302, 347, 1052
Bse118I RCCGGY 1 cut(s) 200
Bse1I ACTGG 3 cut(s) 701, 823, 830
Bse3DI GCAATG 2 cut(s) 870, 1161
Bse8I GATNNNNATC 2 cut(s) 840, 1244
BseBI CCWGG 2 cut(s) 194, 622
BseDI CCNNGG 4 cut(s) 464, 736, 1119, 1448
BseGI GGATG 3 cut(s) 372, 1008, 1188
BseJI GATNNNNATC 2 cut(s) 840, 1244
BseLI CCNNNNNNNGG 3 cut(s) 302, 347, 1052
BseMI GCAATG 2 cut(s) 870, 1161
BseMII CTCAG 2 cut(s) 54, 288
BseNI ACTGG 3 cut(s) 701, 823, 830
BseRI GAGGAG 1 cut(s) 1035
BseX3I CGGCCG 1 cut(s) 1205
BseXI GCAGC 6 cut(s) 209, 529, 929, 975, 1183, 1360
BseYI CCCAGC 2 cut(s) 553, 1192
Bsh1236I CGCG 2 cut(s) 1121, 1204
Bsh1285I CGRYCG 1 cut(s) 1208
BshFI GGCC 3 cut(s) 169, 263, 1207
BsiEI CGRYCG 1 cut(s) 1208
BsiHKCI CYCGRG 1 cut(s) 160
BsiSI CCGG 3 cut(s) 201, 738, 1233
BslFI GGGAC 1 cut(s) 189
BslI CCNNNNNNNGG 3 cut(s) 302, 347, 1052
BsmAI GTCTC 3 cut(s) 163, 328, 464
BsmFI GGGAC 1 cut(s) 189
BsmI GAATGC 1 cut(s) 1251
BsnI GGCC 3 cut(s) 169, 263, 1207
Bso31I GGTCTC 3 cut(s) 163, 328, 464
BsoBI CYCGRG 1 cut(s) 160
Bsp143I GATC 9 cut(s) 144, 810, 835, 841, 1028, 1110, 1245, 1329, 1429
BspACI CCGC 3 cut(s) 1119, 1121, 1204
BspANI GGCC 3 cut(s) 169, 263, 1207
BspCNI CTCAG 2 cut(s) 55, 289
BspFNI CGCG 2 cut(s) 1121, 1204
BspHI TCATGA 1 cut(s) 1457
BspLI GGNNCC 4 cut(s) 88, 205, 339, 911
BspMAI CTGCAG 2 cut(s) 277, 1350
BspTNI GGTCTC 3 cut(s) 163, 328, 464
BsrDI GCAATG 2 cut(s) 870, 1161
BsrFI RCCGGY 1 cut(s) 200
BsrI ACTGG 3 cut(s) 701, 823, 830
BssAI RCCGGY 1 cut(s) 200
BssECI CCNNGG 4 cut(s) 464, 736, 1119, 1448
BssMI GATC 9 cut(s) 144, 810, 835, 841, 1028, 1110, 1245, 1329, 1429
BssSI CACGAG 1 cut(s) 1090
BssT1I CCWWGG 2 cut(s) 464, 1448
Bst2BI CACGAG 1 cut(s) 1090
Bst2UI CCWGG 2 cut(s) 194, 622
Bst4CI ACNGT 2 cut(s) 188, 1266
Bst6I CTCTTC 1 cut(s) 753
BstAPI GCANNNNNTGC 2 cut(s) 872, 923
BstDEI CTNAG 3 cut(s) 63, 297, 377
BstDSI CCRYGG 1 cut(s) 1119
BstF5I GGATG 3 cut(s) 372, 1008, 1188
BstFNI CGCG 2 cut(s) 1121, 1204
BstKTI GATC 9 cut(s) 147, 813, 838, 844, 1031, 1113, 1248, 1332, 1432
BstMAI GTCTC 3 cut(s) 163, 328, 464
BstMBI GATC 9 cut(s) 144, 810, 835, 841, 1028, 1110, 1245, 1329, 1429
BstMCI CGRYCG 1 cut(s) 1208
BstMWI GCNNNNNNNGC 4 cut(s) 443, 872, 923, 1345
BstNI CCWGG 2 cut(s) 194, 622
BstSCI CCNGG 3 cut(s) 192, 620, 736
BstSFI CTRYAG 3 cut(s) 273, 514, 1346
BstUI CGCG 2 cut(s) 1121, 1204
BstV1I GCAGC 6 cut(s) 209, 529, 929, 975, 1183, 1360
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 1 cut(s) 1028
BstYI RGATCY 1 cut(s) 1028
BstZI CGGCCG 1 cut(s) 1205
BsuI GTATCC 1 cut(s) 785
BsuRI GGCC 3 cut(s) 169, 263, 1207
BtgI CCRYGG 1 cut(s) 1119
BtgZI GCGATG 1 cut(s) 1185
BtsCI GGATG 3 cut(s) 372, 1008, 1188
BtsI GCAGTG 1 cut(s) 483
BtsIMutI CAGTG 4 cut(s) 193, 483, 1262, 1442
CaiI CAGNNNCTG 1 cut(s) 923
CciI TCATGA 1 cut(s) 1457
Cfr10I RCCGGY 1 cut(s) 200
Cfr13I GGNCC 5 cut(s) 87, 167, 203, 338, 910
Cfr42I CCGCGG 1 cut(s) 1122
Csp6I GTAC 8 cut(s) 109, 285, 711, 741, 816, 1041, 1227, 1363
CviAII CATG 7 cut(s) 508, 586, 937, 1037, 1396, 1421, 1458
CviQI GTAC 8 cut(s) 109, 285, 711, 741, 816, 1041, 1227, 1363
DdeI CTNAG 3 cut(s) 63, 297, 377
DpnI GATC 9 cut(s) 146, 812, 837, 843, 1030, 1112, 1247, 1331, 1431
DpnII GATC 9 cut(s) 144, 810, 835, 841, 1028, 1110, 1245, 1329, 1429
EaeI YGGCCR 1 cut(s) 1205
EagI CGGCCG 1 cut(s) 1205
Eam1104I CTCTTC 1 cut(s) 753
EarI CTCTTC 1 cut(s) 753
EclXI CGGCCG 1 cut(s) 1205
Eco130I CCWWGG 2 cut(s) 464, 1448
Eco147I AGGCCT 1 cut(s) 263
Eco31I GGTCTC 3 cut(s) 163, 328, 464
Eco32I GATATC 1 cut(s) 1417
Eco47I GGWCC 4 cut(s) 87, 203, 338, 910
Eco52I CGGCCG 1 cut(s) 1205
Eco88I CYCGRG 1 cut(s) 160
EcoO109I RGGNCCY 2 cut(s) 87, 910
EcoRI GAATTC 2 cut(s) 1157, 1399
EcoRII CCWGG 2 cut(s) 192, 620
EcoRV GATATC 1 cut(s) 1417
EcoT14I CCWWGG 2 cut(s) 464, 1448
ErhI CCWWGG 2 cut(s) 464, 1448
FaeI CATG 7 cut(s) 511, 589, 940, 1040, 1399, 1424, 1461
FaqI GGGAC 1 cut(s) 189
FatI CATG 7 cut(s) 507, 585, 936, 1036, 1395, 1420, 1457
FauNDI CATATG 1 cut(s) 245
FbaI TGATCA 1 cut(s) 1329
Fnu4HI GCNGC 8 cut(s) 198, 543, 918, 964, 1119, 1197, 1205, 1349
FokI GGATG 3 cut(s) 379, 1015, 1195
Fsp4HI GCNGC 8 cut(s) 198, 543, 918, 964, 1119, 1197, 1205, 1349
FspBI CTAG 1 cut(s) 914
GluI GCNGC 8 cut(s) 198, 543, 918, 964, 1119, 1197, 1205, 1349
GsaI CCCAGC 2 cut(s) 557, 1196
GsuI CTGGAG 2 cut(s) 840, 1410
HaeIII GGCC 3 cut(s) 169, 263, 1207
HapII CCGG 3 cut(s) 201, 738, 1233
Hin1II CATG 7 cut(s) 511, 589, 940, 1040, 1399, 1424, 1461
HinfI GANTC 5 cut(s) 496, 685, 701, 903, 968
HpaII CCGG 3 cut(s) 201, 738, 1233
HphI GGTGA 1 cut(s) 1315
Hpy166II GTNNAC 1 cut(s) 1365
Hpy188I TCNGA 7 cut(s) 429, 753, 810, 853, 1145, 1260, 1405
Hpy8I GTNNAC 1 cut(s) 1365
HpyAV CCTTC 7 cut(s) 77, 109, 227, 627, 815, 1020, 1418
HpyCH4III ACNGT 2 cut(s) 188, 1266
HpyCH4IV ACGT 1 cut(s) 997
HpyF10VI GCNNNNNNNGC 4 cut(s) 443, 872, 923, 1345
HpyF3I CTNAG 3 cut(s) 63, 297, 377
HpySE526I ACGT 1 cut(s) 997
Hsp92II CATG 7 cut(s) 511, 589, 940, 1040, 1399, 1424, 1461
Ksp22I TGATCA 1 cut(s) 1329
KspI CCGCGG 1 cut(s) 1122
Kzo9I GATC 9 cut(s) 144, 810, 835, 841, 1028, 1110, 1245, 1329, 1429
LmnI GCTCC 3 cut(s) 821, 1235, 1429
Lsp1109I GCAGC 6 cut(s) 209, 529, 929, 975, 1183, 1360
LweI GCATC 6 cut(s) 186, 929, 993, 1079, 1208, 1326
MaeI CTAG 1 cut(s) 914
MaeII ACGT 1 cut(s) 997
MaeIII GTNAC 2 cut(s) 897, 1439
MalI GATC 9 cut(s) 146, 812, 837, 843, 1030, 1112, 1247, 1331, 1431
MboI GATC 9 cut(s) 144, 810, 835, 841, 1028, 1110, 1245, 1329, 1429
MboII GAAGA 5 cut(s) 139, 194, 563, 619, 740
MfeI CAATTG 1 cut(s) 471
MflI RGATCY 1 cut(s) 1028
MlyI GAGTC 1 cut(s) 962
MmeI TCCRAC 4 cut(s) 27, 344, 1033, 1283
MseI TTAA 5 cut(s) 524, 690, 1212, 1268, 1386
MslI CAYNNNNRTG 3 cut(s) 506, 584, 941
MspA1I CMGCKG 2 cut(s) 1121, 1196
MspI CCGG 3 cut(s) 201, 738, 1233
MspR9I CCNGG 3 cut(s) 194, 622, 738
MunI CAATTG 1 cut(s) 471
Mva1269I GAATGC 1 cut(s) 1251
MvaI CCWGG 2 cut(s) 194, 622
MvnI CGCG 2 cut(s) 1121, 1204
MwoI GCNNNNNNNGC 4 cut(s) 443, 872, 923, 1345
NciI CCSGG 1 cut(s) 738
NdeI CATATG 1 cut(s) 245
NdeII GATC 9 cut(s) 144, 810, 835, 841, 1028, 1110, 1245, 1329, 1429
NlaIII CATG 7 cut(s) 511, 589, 940, 1040, 1399, 1424, 1461
NlaIV GGNNCC 4 cut(s) 88, 205, 339, 911
PagI TCATGA 1 cut(s) 1457
PceI AGGCCT 1 cut(s) 263
PctI GAATGC 1 cut(s) 1251
PfeI GAWTC 4 cut(s) 496, 685, 701, 903
PflFI GACNNNGTC 1 cut(s) 188
PkrI GCNGC 8 cut(s) 199, 544, 919, 965, 1120, 1198, 1206, 1350
PleI GAGTC 1 cut(s) 962
PpsI GAGTC 1 cut(s) 962
PpuMI RGGWCCY 2 cut(s) 87, 910
Psp5II RGGWCCY 2 cut(s) 87, 910
Psp6I CCWGG 2 cut(s) 192, 620
PspFI CCCAGC 2 cut(s) 553, 1192
PspGI CCWGG 2 cut(s) 192, 620
PspN4I GGNNCC 4 cut(s) 88, 205, 339, 911
PspPI GGNCC 5 cut(s) 87, 167, 203, 338, 910
PspPPI RGGWCCY 2 cut(s) 87, 910
PstI CTGCAG 2 cut(s) 277, 1350
PstNI CAGNNNCTG 1 cut(s) 923
PsuI RGATCY 1 cut(s) 1028
PsyI GACNNNGTC 1 cut(s) 188
PvuII CAGCTG 1 cut(s) 1196
RsaI GTAC 8 cut(s) 110, 286, 712, 742, 817, 1042, 1228, 1364
RsaNI GTAC 8 cut(s) 109, 285, 711, 741, 816, 1041, 1227, 1363
RseI CAYNNNNRTG 3 cut(s) 506, 584, 941
SacII CCGCGG 1 cut(s) 1122
SaqAI TTAA 5 cut(s) 524, 690, 1212, 1268, 1386
SatI GCNGC 8 cut(s) 198, 543, 918, 964, 1119, 1197, 1205, 1349
Sau3AI GATC 9 cut(s) 144, 810, 835, 841, 1028, 1110, 1245, 1329, 1429
Sau96I GGNCC 5 cut(s) 87, 167, 203, 338, 910
ScaI AGTACT 1 cut(s) 712
SchI GAGTC 1 cut(s) 962
ScrFI CCNGG 3 cut(s) 194, 622, 738
SfaNI GCATC 6 cut(s) 186, 929, 993, 1079, 1208, 1326
SfcI CTRYAG 3 cut(s) 273, 514, 1346
Sfr303I CCGCGG 1 cut(s) 1122
SgrBI CCGCGG 1 cut(s) 1122
SinI GGWCC 4 cut(s) 87, 203, 338, 910
SmiMI CAYNNNNRTG 3 cut(s) 506, 584, 941
SseBI AGGCCT 1 cut(s) 263
SsiI CCGC 3 cut(s) 1119, 1121, 1204
SspI AATATT 1 cut(s) 58
SspMI CTAG 1 cut(s) 914
StuI AGGCCT 1 cut(s) 263
StyD4I CCNGG 3 cut(s) 192, 620, 736
StyI CCWWGG 2 cut(s) 464, 1448
TaaI ACNGT 2 cut(s) 188, 1266
TaiI ACGT 1 cut(s) 1000
TaqI TCGA 1 cut(s) 180
TatI WGTACW 2 cut(s) 710, 1362
TauI GCSGC 2 cut(s) 1121, 1207
TfiI GAWTC 4 cut(s) 496, 685, 701, 903
Tru1I TTAA 5 cut(s) 524, 690, 1212, 1268, 1386
Tru9I TTAA 5 cut(s) 524, 690, 1212, 1268, 1386
TscAI CASTG 4 cut(s) 193, 483, 1269, 1442
TseI GCWGC 6 cut(s) 197, 542, 917, 963, 1196, 1348
TspDTI ATGAA 9 cut(s) 17, 383, 524, 568, 574, 1150, 1199, 1412, 1446
TspRI CASTG 4 cut(s) 193, 483, 1269, 1442
Tth111I GACNNNGTC 1 cut(s) 188
VpaK11BI GGWCC 4 cut(s) 87, 203, 338, 910
XapI RAATTY 3 cut(s) 1056, 1157, 1399
XcmI CCANNNNNNNNNTGG 1 cut(s) 628
XspI CTAG 1 cut(s) 914
ZrmI AGTACT 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.