Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001720

Physical Location & Seq

Genomic Coordinates Reverse (-)

30086894 .. 30103314

Gene Structure 16421 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG294900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGCATATGGTGCAAATGAAAGGTTCATCGGATAGTGTCCGAGATGAAATAGAACAACGCGGCGGCGCTGGTGACGGCAACTCCATAGCTCCGTCTTTCGGTAATTCACTGTCAAAAGGGACTCATCGTCATCATCAAGACCAGAAATTGAGGACCACGGCAACTAGGGAAGGCTCCATTGAAATGGGAGAGCACAACAATCCCGAATATGTTGTGGTTAGTGAAGCACAATCCCCTAGGGTAAATAACTTCAAGAAAGTCTCAGTTCTGCCCCTTGTCTTCCTCATCTTCTATGAGGTATCTGGGGGTCCATTTGGTATTGAGGACAGTGTTCAGGCTGCCGGTCCCCTTCTAGCGCTTCTTGGGTTCTTGGTCTTTCCATTCATTTGGAGTGTTCCTGAGGCCTTGATTACTGCAGAGATGGGTACCATGTTCCCTGTGAATGGGGGTTATGTGGTTTGGGTTTCTTCGGCCCTGGGTCCCTTTTGGGGGTTTCAACAAGGATGGGTGAAATGGTTAAGTGGAGTCATTGATAATGCTTTGTACCCAGTTCTGTTTTTGGACTACTTGAAGTCAGCAATACCAGCTTTAGGCGGTGGACTTCCAAGAATCGTGGCAGTGTTAGCTTTGACATTGGTCCTCACTTACTTAAACTATAGGGGTTTAACCATTGTGGGATGGGTTGCTGTACTTTTAGGGATTTTCTCAATCATTCCTTTTGTGGTTATGGGACTTGTGGCAATTCCCAAGTTGGAGCCTTCAAGATGGTTAGTGGTGAGTCTACATAATGTGGACTGGAATTTGTATTTGAACACTCTCTTTTGGAATTTGAACTATTGGGATTCTATAAGTACACTTGCCGGAGAGGTGGAGAACCCAAAGAAAACTCTCCCCAAGGCTCTTTTTTATGCGTTGATTTTGGTTGTTATTGGATATTTCTTCCCCCTTTTAATTGGTACTGGGGCTGTTCCACTTGATCGTGAGTTGTGGACTGATGGTTACTTCTCTGATATTGCAAAAATTGTTGGGGGAGTTTGGTTGAGATGTTGGATTCAAGGGGCTGCGGCGATGTCAAATATGGGGATGTTTGTGGCTGAAATGAGCAGTGACTCTTTTCAACTTCTTGGGATGGCAGAAAGAGGGATGTTGCCTGAGTTCTTTGGTAAGCGGTCTCGTTATGGAACCCCAGTCATTGGCATTATGTTCTCAGCTTCCGGAGTCCTTTTGCTATCTTGGCTAAACTTTCAAGAGATTGTAGCTGCAGAAAACTTCTTGTACTGTGTTGGAATGATTTTGGAGTTCATAGCATTTATAATATTACGGGTGAAGCATCCAGCTGCATCTCGGCCATACAAGATTCCTGTTGGAACAGTTGGAACCATACTTTTGTGCATTCCGCCAACCCTGCTAATTGGTGTAGTGTTGGCTCTTTCTGAACTCAAGGTTGTGGTTGTGAGCCTTATAGCTATAGTGATCGGCCTTGTGATGCAGCCCTGTCTCACATATGTTGAGAGGAAGAGGTGGATGAAGTTCTCCATCAGTTCTGATCTCCCAGATCTTCATGGTGCTAGTCAGGAGAGGGCCAACTCCTTAATAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006082 GO:0006520 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0006928 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015171 GO:0015179 GO:0015203 GO:0015291 GO:0015297 GO:0015318 GO:0015711 GO:0015807 GO:0015846 GO:0015849 GO:0016020 GO:0016021 GO:0016043 GO:0016477 GO:0019752 GO:0022607 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0040011 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0048870 GO:0050900 GO:0051179 GO:0051234 GO:0051674 GO:0055085 GO:0065003 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0098656 GO:1901564 GO:1902047 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2

Protein Analysis

533

Amino Acids

58.57

Weight (kDa)

6.27

Isoelectric Point (pI)

37.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	90 - 471	1.2e-39	Amino acid permease
AA_permease	PF00324	107 - 476	1.7e-20	Amino acid permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31820 AT1G31830 AT1G31830 AT5G05630
fragaria_vesca	FvH4_2g15680 FvH4_2g15680 FvH4_4g35270 FvH4_5g24050 FvH4_5g24050
malus_domestica	MD06G1016700.v1.1 MD17G1241900.v1.1
prunus_persica	Prupe.5G019700_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1
pyrus_communis	pycom05g11950 pycom06g01360 pycom10g10980
rosa_chinensis	RchiOBHm_Chr6g0278981 RchiOBHm_Chr7g0213541 RchiOBHm_Chr7g0243451
rosa_laevigata	RLG00000002797 RLG00000013178
rosa_multiflora	Rmu_co8436609.1_g000001 Rmu_sc0002080.1_g000041 Rmu_sc0008539.1_g000001 Rmu_sc0009618.1_g000016 Rmu_sc0010076.1_g000001
rosa_roxburghii	Rroxscaffold_3G00245800 Rroxscaffold_7G00189290
rosa_rugosa	Rorug06G0120600 Rorug07G0142700 Rorug07G0142800 Rorug07G0319500
rosa_samantha	Rh6AG229300 Rh6BG234500 Rh6CG236700 Rh6DG228300 Rh7AG276000 Rh7BG270400 Rh7BG445400 Rh7CG294900 Rh7DG282600
rosa_wichuraiana	Rw0G023490 Rw6G020080 Rw7G023850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1313
Acc65I	GGTACC	1 cut(s)	425
AccB1I	GGYRCC	1 cut(s)	425
AccB7I	CCANNNNNTGG	1 cut(s)	1193
AccI	GTMKAC	1 cut(s)	781
AccII	CGCG	1 cut(s)	60
AccIII	TCCGGA	1 cut(s)	1214
AciI	CCGC	6 cut(s)	60, 63, 594, 1064, 1168, 1397
AcoI	YGGCCR	1 cut(s)	1346
AcsI	RAATTY	2 cut(s)	799, 826
AfaI	GTAC	6 cut(s)	427, 545, 690, 853, 958, 1277
AfeI	AGCGCT	1 cut(s)	357
AfiI	CCNNNNNNNGG	6 cut(s)	98, 443, 488, 489, 590, 1193
AhdI	GACNNNNNGTC	1 cut(s)	126
AjnI	CCWGG	1 cut(s)	474
AluBI	AGCT	7 cut(s)	89, 587, 626, 1211, 1259, 1337, 1466
AluI	AGCT	7 cut(s)	89, 587, 626, 1211, 1259, 1337, 1466
Alw21I	GWGCWC	1 cut(s)	195
Alw26I	GTCTC	3 cut(s)	265, 1176, 1502
Aor13HI	TCCGGA	1 cut(s)	1214
Aor51HI	AGCGCT	1 cut(s)	357
AoxI	GGCC	5 cut(s)	402, 471, 1346, 1477, 1581
ApeKI	GCWGC	5 cut(s)	338, 1061, 1259, 1337, 1489
ApoI	RAATTY	2 cut(s)	799, 826
Asp718I	GGTACC	1 cut(s)	425
AspA2I	CCTAGG	1 cut(s)	236
AspLEI	GCGC	2 cut(s)	68, 358
AspS9I	GGNCC	7 cut(s)	153, 308, 344, 472, 479, 637, 1581
AsuHPI	GGTGA	4 cut(s)	83, 520, 787, 1336
AvaII	GGWCC	5 cut(s)	153, 308, 344, 479, 637
AvrII	CCTAGG	1 cut(s)	236
AxyI	CCTNAGG	1 cut(s)	399
BanI	GGYRCC	1 cut(s)	425
BbsI	GAAGAC	1 cut(s)	271
Bbv12I	GWGCWC	1 cut(s)	195
BbvI	GCAGC	5 cut(s)	325, 1048, 1246, 1324, 1501
BccI	CCATC	7 cut(s)	415, 498, 672, 759, 989, 1123, 1544
BceAI	ACGGC	2 cut(s)	91, 174
BciT130I	CCWGG	1 cut(s)	476
BcoDI	GTCTC	3 cut(s)	265, 1176, 1502
BfaI	CTAG	4 cut(s)	165, 237, 353, 1569
BfmI	CTRYAG	4 cut(s)	414, 655, 1260, 1467
BfoI	RGCGCY	2 cut(s)	69, 359
BglII	AGATCT	1 cut(s)	1555
BisI	GCNGC	8 cut(s)	61, 64, 339, 1062, 1065, 1260, 1338, 1490
BlnI	CCTAGG	1 cut(s)	236
BlsI	GCNGC	8 cut(s)	62, 65, 340, 1063, 1066, 1261, 1339, 1491
Bme1390I	CCNGG	1 cut(s)	476
Bme18I	GGWCC	5 cut(s)	153, 308, 344, 479, 637
BmeRI	GACNNNNNGTC	1 cut(s)	126
BmgT120I	GGNCC	7 cut(s)	153, 308, 344, 472, 479, 637, 1581
BmiI	GGNNCC	9 cut(s)	175, 309, 346, 427, 480, 481, 756, 1183, 1378
BmrFI	CCNGG	1 cut(s)	476
BmrI	ACTGGG	3 cut(s)	542, 969, 1181
BmsI	GCATC	3 cut(s)	1339, 1349, 1476
BmuI	ACTGGG	3 cut(s)	542, 969, 1181
BoxI	GACNNNNGTC	1 cut(s)	635
BpiI	GAAGAC	1 cut(s)	271
BpuEI	CTTGAG	1 cut(s)	1424
BsaI	GGTCTC	1 cut(s)	1176
BsaJI	CCNNGG	5 cut(s)	156, 236, 474, 475, 894
BsaWI	WCCGGW	1 cut(s)	1214
BsaXI	ACNNNNNCTCC	2 cut(s)	65, 95
Bsc4I	CCNNNNNNNGG	6 cut(s)	98, 443, 488, 489, 590, 1193
Bse118I	RCCGGY	1 cut(s)	341
Bse1I	ACTGG	4 cut(s)	548, 800, 964, 1187
Bse21I	CCTNAGG	1 cut(s)	399
BseAI	TCCGGA	1 cut(s)	1214
BseBI	CCWGG	1 cut(s)	476
BseDI	CCNNGG	5 cut(s)	156, 236, 474, 475, 894
BseGI	GGATG	7 cut(s)	509, 683, 1089, 1134, 1149, 1330, 1530
BseLI	CCNNNNNNNGG	6 cut(s)	98, 443, 488, 489, 590, 1193
BseMII	CTCAG	4 cut(s)	276, 390, 1143, 1221
BseNI	ACTGG	4 cut(s)	548, 800, 964, 1187
BseXI	GCAGC	5 cut(s)	325, 1048, 1246, 1324, 1501
Bsh1236I	CGCG	1 cut(s)	60
BshFI	GGCC	5 cut(s)	404, 473, 1348, 1479, 1583
BshNI	GGYRCC	1 cut(s)	425
BsiHKAI	GWGCWC	1 cut(s)	195
BsiSI	CCGG	3 cut(s)	342, 861, 1215
BslFI	GGGAC	4 cut(s)	133, 330, 465, 744
BslI	CCNNNNNNNGG	6 cut(s)	98, 443, 488, 489, 590, 1193
BsmAI	GTCTC	3 cut(s)	265, 1176, 1502
BsmFI	GGGAC	4 cut(s)	133, 330, 465, 744
BsmI	GAATGC	1 cut(s)	1392
BsnI	GGCC	5 cut(s)	404, 473, 1348, 1479, 1583
Bso31I	GGTCTC	1 cut(s)	1176
Bsp1286I	GDGCHC	1 cut(s)	195
Bsp13I	TCCGGA	1 cut(s)	1214
Bsp143I	GATC	4 cut(s)	976, 1473, 1546, 1555
BspACI	CCGC	6 cut(s)	60, 63, 594, 1064, 1168, 1397
BspANI	GGCC	5 cut(s)	404, 473, 1348, 1479, 1583
BspCNI	CTCAG	4 cut(s)	275, 391, 1144, 1220
BspEI	TCCGGA	1 cut(s)	1214
BspFNI	CGCG	1 cut(s)	60
BspLI	GGNNCC	9 cut(s)	175, 309, 346, 427, 480, 481, 756, 1183, 1378
BspMAI	CTGCAG	2 cut(s)	418, 1264
BspT107I	GGYRCC	1 cut(s)	425
BspTNI	GGTCTC	1 cut(s)	1176
BsrFI	RCCGGY	1 cut(s)	341
BsrI	ACTGG	4 cut(s)	548, 800, 964, 1187
BssAI	RCCGGY	1 cut(s)	341
BssECI	CCNNGG	5 cut(s)	156, 236, 474, 475, 894
BssMI	GATC	4 cut(s)	976, 1473, 1546, 1555
BssT1I	CCWWGG	2 cut(s)	236, 894
Bst2UI	CCWGG	1 cut(s)	476
Bst4CI	ACNGT	4 cut(s)	111, 329, 1280, 1372
Bst6I	CTCTTC	1 cut(s)	1511
BstAPI	GCANNNNNTGC	1 cut(s)	10
BstDEI	CTNAG	4 cut(s)	262, 399, 1152, 1207
BstDSI	CCRYGG	1 cut(s)	156
BstF5I	GGATG	7 cut(s)	509, 683, 1089, 1134, 1149, 1330, 1530
BstFNI	CGCG	1 cut(s)	60
BstH2I	RGCGCY	2 cut(s)	69, 359
BstHHI	GCGC	2 cut(s)	68, 358
BstKTI	GATC	4 cut(s)	979, 1476, 1549, 1558
BstMAI	GTCTC	3 cut(s)	265, 1176, 1502
BstMBI	GATC	4 cut(s)	976, 1473, 1546, 1555
BstMWI	GCNNNNNNNGC	5 cut(s)	10, 584, 623, 1234, 1405
BstNI	CCWGG	1 cut(s)	476
BstPAI	GACNNNNGTC	1 cut(s)	635
BstSCI	CCNGG	1 cut(s)	474
BstSFI	CTRYAG	4 cut(s)	414, 655, 1260, 1467
BstUI	CGCG	1 cut(s)	60
BstV1I	GCAGC	5 cut(s)	325, 1048, 1246, 1324, 1501
BstV2I	GAAGAC	1 cut(s)	271
BstX2I	RGATCY	1 cut(s)	1555
BstXI	CCANNNNNNTGG	2 cut(s)	184, 387
BstYI	RGATCY	1 cut(s)	1555
Bsu36I	CCTNAGG	1 cut(s)	399
BsuRI	GGCC	5 cut(s)	404, 473, 1348, 1479, 1583
BtgI	CCRYGG	1 cut(s)	156
BtgZI	GCGATG	1 cut(s)	1082
BtsCI	GGATG	7 cut(s)	509, 683, 1089, 1134, 1149, 1330, 1530
BtsI	GCAGTG	2 cut(s)	624, 1111
BtsIMutI	CAGTG	4 cut(s)	107, 334, 624, 1111
CfoI	GCGC	2 cut(s)	68, 358
Cfr10I	RCCGGY	1 cut(s)	341
Cfr13I	GGNCC	7 cut(s)	153, 308, 344, 472, 479, 637, 1581
Csp6I	GTAC	6 cut(s)	426, 544, 689, 852, 957, 1276
CspCI	CAANNNNNGTGG	2 cut(s)	594, 629
CviAII	CATG	2 cut(s)	430, 1562
CviQI	GTAC	6 cut(s)	426, 544, 689, 852, 957, 1276
DdeI	CTNAG	4 cut(s)	262, 399, 1152, 1207
DpnI	GATC	4 cut(s)	978, 1475, 1548, 1557
DpnII	GATC	4 cut(s)	976, 1473, 1546, 1555
DriI	GACNNNNNGTC	1 cut(s)	126
EaeI	YGGCCR	1 cut(s)	1346
Eam1104I	CTCTTC	1 cut(s)	1511
Eam1105I	GACNNNNNGTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	1511
EciI	GGCGGA	1 cut(s)	1386
Eco130I	CCWWGG	2 cut(s)	236, 894
Eco147I	AGGCCT	1 cut(s)	404
Eco31I	GGTCTC	1 cut(s)	1176
Eco47I	GGWCC	5 cut(s)	153, 308, 344, 479, 637
Eco47III	AGCGCT	1 cut(s)	357
Eco81I	CCTNAGG	1 cut(s)	399
EcoO109I	RGGNCCY	1 cut(s)	479
EcoRII	CCWGG	1 cut(s)	474
EcoT14I	CCWWGG	2 cut(s)	236, 894
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	236, 894
FaeI	CATG	2 cut(s)	433, 1565
FaqI	GGGAC	4 cut(s)	133, 330, 465, 744
FatI	CATG	2 cut(s)	429, 1561
FauNDI	CATATG	2 cut(s)	6, 1504
FblI	GTMKAC	1 cut(s)	781
Fnu4HI	GCNGC	8 cut(s)	61, 64, 339, 1062, 1065, 1260, 1338, 1490
FokI	GGATG	7 cut(s)	516, 690, 1096, 1141, 1156, 1317, 1537
Fsp4HI	GCNGC	8 cut(s)	61, 64, 339, 1062, 1065, 1260, 1338, 1490
FspBI	CTAG	4 cut(s)	165, 237, 353, 1569
GlaI	GCGC	2 cut(s)	67, 357
GluI	GCNGC	8 cut(s)	61, 64, 339, 1062, 1065, 1260, 1338, 1490
HaeII	RGCGCY	2 cut(s)	69, 359
HaeIII	GGCC	5 cut(s)	404, 473, 1348, 1479, 1583
HapII	CCGG	3 cut(s)	342, 861, 1215
HhaI	GCGC	2 cut(s)	68, 358
Hin1II	CATG	2 cut(s)	433, 1565
Hin6I	GCGC	2 cut(s)	66, 356
HinP1I	GCGC	2 cut(s)	66, 356
HinfI	GANTC	9 cut(s)	121, 525, 609, 778, 842, 1051, 1109, 1218, 1357
HpaII	CCGG	3 cut(s)	342, 861, 1215
HphI	GGTGA	4 cut(s)	83, 520, 787, 1336
Hpy166II	GTNNAC	5 cut(s)	599, 782, 793, 854, 990
Hpy188I	TCNGA	5 cut(s)	31, 41, 1009, 1435, 1546
Hpy188III	TCNNGA	9 cut(s)	137, 203, 253, 398, 762, 980, 1215, 1247, 1574
Hpy8I	GTNNAC	5 cut(s)	599, 782, 793, 854, 990
HpyAV	CCTTC	3 cut(s)	164, 359, 768
HpyCH4III	ACNGT	4 cut(s)	111, 329, 1280, 1372
HpyCH4V	TGCA	8 cut(s)	4, 13, 416, 1016, 1262, 1340, 1392, 1489
HpyF10VI	GCNNNNNNNGC	5 cut(s)	10, 584, 623, 1234, 1405
HpyF3I	CTNAG	4 cut(s)	262, 399, 1152, 1207
Hsp92II	CATG	2 cut(s)	433, 1565
HspAI	GCGC	2 cut(s)	66, 356
KflI	GGGWCCC	1 cut(s)	479
Kpn2I	TCCGGA	1 cut(s)	1214
KpnI	GGTACC	1 cut(s)	429
Kzo9I	GATC	4 cut(s)	976, 1473, 1546, 1555
LmnI	GCTCC	3 cut(s)	94, 179, 754
Lsp1109I	GCAGC	5 cut(s)	325, 1048, 1246, 1324, 1501
LweI	GCATC	3 cut(s)	1339, 1349, 1476
MaeI	CTAG	4 cut(s)	165, 237, 353, 1569
MaeIII	GTNAC	3 cut(s)	71, 998, 1106
MalI	GATC	4 cut(s)	978, 1475, 1548, 1557
MboI	GATC	4 cut(s)	976, 1473, 1546, 1555
MboII	GAAGA	6 cut(s)	271, 280, 459, 931, 1528, 1550
MflI	RGATCY	1 cut(s)	1555
MhlI	GDGCHC	1 cut(s)	195
MluCI	AATT	8 cut(s)	103, 146, 741, 799, 826, 951, 1020, 1410
MlyI	GAGTC	5 cut(s)	115, 534, 787, 1103, 1227
MmeI	TCCRAC	5 cut(s)	732, 1028, 1264, 1345, 1354
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	1214
MseI	TTAA	5 cut(s)	518, 650, 665, 950, 1592
MslI	CAYNNNNRTG	1 cut(s)	182
MspA1I	CMGCKG	1 cut(s)	1337
MspI	CCGG	3 cut(s)	342, 861, 1215
MspR9I	CCNGG	1 cut(s)	476
Mva1269I	GAATGC	1 cut(s)	1392
MvaI	CCWGG	1 cut(s)	476
MvnI	CGCG	1 cut(s)	60
MwoI	GCNNNNNNNGC	5 cut(s)	10, 584, 623, 1234, 1405
NdeI	CATATG	2 cut(s)	6, 1504
NdeII	GATC	4 cut(s)	976, 1473, 1546, 1555
NlaIII	CATG	2 cut(s)	433, 1565
NlaIV	GGNNCC	9 cut(s)	175, 309, 346, 427, 480, 481, 756, 1183, 1378
NmeAIII	GCCGAG	1 cut(s)	1324
NmuCI	GTSAC	2 cut(s)	71, 1106
NsiI	ATGCAT	1 cut(s)	6
PasI	CCCWGGG	1 cut(s)	475
PceI	AGGCCT	1 cut(s)	404
PctI	GAATGC	1 cut(s)	1392
PfeI	GAWTC	4 cut(s)	609, 842, 1051, 1357
PflMI	CCANNNNNTGG	1 cut(s)	1193
PkrI	GCNGC	8 cut(s)	62, 65, 340, 1063, 1066, 1261, 1339, 1491
PleI	GAGTC	5 cut(s)	115, 533, 786, 1103, 1226
PpsI	GAGTC	5 cut(s)	115, 533, 786, 1103, 1226
PpuMI	RGGWCCY	1 cut(s)	479
PshAI	GACNNNNGTC	1 cut(s)	635
PsiI	TTATAA	1 cut(s)	1313
Psp5II	RGGWCCY	1 cut(s)	479
Psp6I	CCWGG	1 cut(s)	474
PspGI	CCWGG	1 cut(s)	474
PspN4I	GGNNCC	9 cut(s)	175, 309, 346, 427, 480, 481, 756, 1183, 1378
PspPI	GGNCC	7 cut(s)	153, 308, 344, 472, 479, 637, 1581
PspPPI	RGGWCCY	1 cut(s)	479
PstI	CTGCAG	2 cut(s)	418, 1264
PsuI	RGATCY	1 cut(s)	1555
PvuII	CAGCTG	1 cut(s)	1337
RsaI	GTAC	6 cut(s)	427, 545, 690, 853, 958, 1277
RsaNI	GTAC	6 cut(s)	426, 544, 689, 852, 957, 1276
RseI	CAYNNNNRTG	1 cut(s)	182
SaqAI	TTAA	5 cut(s)	518, 650, 665, 950, 1592
SatI	GCNGC	8 cut(s)	61, 64, 339, 1062, 1065, 1260, 1338, 1490
Sau3AI	GATC	4 cut(s)	976, 1473, 1546, 1555
Sau96I	GGNCC	7 cut(s)	153, 308, 344, 472, 479, 637, 1581
SchI	GAGTC	5 cut(s)	115, 534, 787, 1103, 1227
ScrFI	CCNGG	1 cut(s)	476
SduI	GDGCHC	1 cut(s)	195
SfaNI	GCATC	3 cut(s)	1339, 1349, 1476
SfcI	CTRYAG	4 cut(s)	414, 655, 1260, 1467
SinI	GGWCC	5 cut(s)	153, 308, 344, 479, 637
SmiMI	CAYNNNNRTG	1 cut(s)	182
SmlI	CTYRAG	1 cut(s)	1439
SmoI	CTYRAG	1 cut(s)	1439
Sse9I	AATT	8 cut(s)	103, 146, 741, 799, 826, 951, 1020, 1410
SseBI	AGGCCT	1 cut(s)	404
SsiI	CCGC	6 cut(s)	60, 63, 594, 1064, 1168, 1397
SspI	AATATT	1 cut(s)	1317
SspMI	CTAG	4 cut(s)	165, 237, 353, 1569
StuI	AGGCCT	1 cut(s)	404
StyD4I	CCNGG	1 cut(s)	474
StyI	CCWWGG	2 cut(s)	236, 894
TaaI	ACNGT	4 cut(s)	111, 329, 1280, 1372
TasI	AATT	8 cut(s)	103, 146, 741, 799, 826, 951, 1020, 1410
TatI	WGTACW	3 cut(s)	688, 851, 1275
TauI	GCSGC	3 cut(s)	63, 66, 1067
TfiI	GAWTC	4 cut(s)	609, 842, 1051, 1357
Tru1I	TTAA	5 cut(s)	518, 650, 665, 950, 1592
Tru9I	TTAA	5 cut(s)	518, 650, 665, 950, 1592
TscAI	CASTG	4 cut(s)	114, 334, 624, 1111
TseFI	GTSAC	2 cut(s)	71, 1106
TseI	GCWGC	5 cut(s)	338, 1061, 1259, 1337, 1489
Tsp45I	GTSAC	2 cut(s)	71, 1106
TspDTI	ATGAA	7 cut(s)	15, 32, 60, 373, 1291, 1541, 1550
TspGWI	ACGGA	1 cut(s)	81
TspRI	CASTG	4 cut(s)	114, 334, 624, 1111
Van91I	CCANNNNNTGG	1 cut(s)	1193
VpaK11BI	GGWCC	5 cut(s)	153, 308, 344, 479, 637
XapI	RAATTY	2 cut(s)	799, 826
XmaJI	CCTAGG	1 cut(s)	236
XmiI	GTMKAC	1 cut(s)	781
XspI	CTAG	4 cut(s)	165, 237, 353, 1569
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.