Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010076.1

Orthogroup ID

OG0001720

Physical Location & Seq

Genomic Coordinates Forward (+)

5506 .. 14138

Gene Structure 8633 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010076.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

atgcgcgtgttggtgcaggagtgcgcggaggcggtgctgcaggcggttgggatcggtgatgcgcgcacgggctgctgggatcaggtcggcggggatgcgaggttggccacgatgttgctgggatctcacacacgggcccgtcgctgcaggtggcttgggctacgcatgtgggtcgtgaggtcaggttccagatcgggtcggtgctggaggcccgggctgcattggggcagtgggctgtgcgtgctgaaggaggatgagcaggcggggttgctaggatctgcgtggctgtgtagacagttagctcaggctgatgggtttaagtctctctctctctctcatatgcatatggtgcaattgaaaggttcatcggatagtgtccgagatgaaacagaacaacgcggtggcgctggtgacggcaactccatagctccgtctttcggtaattcactgtcaacagagactcatcgccatcatcaagaccagaaattgaggaccacggcaactagggaaggctccattgaaatgggagagcacaacaatcccgaatatgttgtggttagtgaagcacaatcccctagggctgccggtccccttctagcgcttcttgggttcttggtctttccattcatttggagtgtgcctgaggccttgattactgcagagatgggtaccatgttccctgtgaatgggggttatgtggtttgggtttcttcggccctgggtccattttgggggtttcaacaaggatgggtgaaatggttaagtggagtcattgataatgctttgtacccagttctgtttttggattacttgaagtcagcaataccagctttaggcggtggacttccaagaatcgtggcagtgttagctttgacattgttcctcacttacttaaactataggggtttaaccattgtgggatgggttgctgtacttttagggattttctcaatcattccttttgtggttatgggacttgtggcaattcccaagttggagccttcaagatggttagtggtgagtctacataatgtggactggaatttgtatttgaacactctcttttggaatttgaactattgggattctataagtacacttgccggagaggtggagaacccaaagaaaactctccccaaggctcttttttatgcgttgattttggttgttgttggatatttcttcccccttttaattggtactggggctgttccgcttgatcgtgagttgtggactgatggttacttctctgatattgcaaaaattgttgggggagtttggttgagatgttggattcaaggggctgcggcgatgtcaaatatggggatgtttgtggctgaaatgagcagtgactcttttcaacttcttgggatggcagaaagagggatgttgcctgagttctttggtaagcggtctcgttatggaaccccagtcattggcattatgttctcagcttccggagtccttttgctatcttggctaagctttcaagagattgtagctgcagaaaacttcttgtactgtgttggaatgattttggagttcatagcatttataatattacgggtgaagcatccagctgcatctcggccatacaagattcctgttggaacagttggaaccatacttttgtgcattccgccaaccctgctaattggtgtagtgttggctctttctgaactcaaggttgtggttgtgagccttatagctatagtgatcggccttgtgatgcagccctgtctcacatatgttgagaggaagaggtggatgaagttctccatcagttctgatctcccagatcttcatggtgctagtcaggagagggccaactccttaatagattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006082 GO:0006520 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0006928 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015171 GO:0015179 GO:0015203 GO:0015291 GO:0015297 GO:0015318 GO:0015711 GO:0015807 GO:0015846 GO:0015849 GO:0016020 GO:0016021 GO:0016043 GO:0016477 GO:0019752 GO:0022607 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0040011 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0048870 GO:0050900 GO:0051179 GO:0051234 GO:0051674 GO:0055085 GO:0065003 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0098656 GO:1901564 GO:1902047 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2

Protein Analysis

614

Amino Acids

67.44

Weight (kDa)

7.99

Isoelectric Point (pI)

38.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31820 AT1G31830 AT1G31830 AT5G05630
fragaria_vesca	FvH4_2g15680 FvH4_2g15680 FvH4_4g35270 FvH4_5g24050 FvH4_5g24050
malus_domestica	MD06G1016700.v1.1 MD17G1241900.v1.1
prunus_persica	Prupe.5G019700_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1
pyrus_communis	pycom05g11950 pycom06g01360 pycom10g10980
rosa_chinensis	RchiOBHm_Chr6g0278981 RchiOBHm_Chr7g0213541 RchiOBHm_Chr7g0243451
rosa_laevigata	RLG00000002797 RLG00000013178
rosa_multiflora	Rmu_co8436609.1_g000001 Rmu_sc0002080.1_g000041 Rmu_sc0008539.1_g000001 Rmu_sc0009618.1_g000016 Rmu_sc0010076.1_g000001
rosa_roxburghii	Rroxscaffold_3G00245800 Rroxscaffold_7G00189290
rosa_rugosa	Rorug06G0120600 Rorug07G0142700 Rorug07G0142800 Rorug07G0319500
rosa_samantha	Rh6AG229300 Rh6BG234500 Rh6CG236700 Rh6DG228300 Rh7AG276000 Rh7BG270400 Rh7BG445400 Rh7CG294900 Rh7DG282600
rosa_wichuraiana	Rw0G023490 Rw6G020080 Rw7G023850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1556
AarI	CACCTGC	1 cut(s)	138
Acc36I	ACCTGC	1 cut(s)	138
Acc65I	GGTACC	1 cut(s)	668
AccB1I	GGYRCC	1 cut(s)	668
AccB7I	CCANNNNNTGG	1 cut(s)	1436
AccI	GTMKAC	2 cut(s)	292, 1024
AccII	CGCG	4 cut(s)	6, 26, 64, 399
AccIII	TCCGGA	1 cut(s)	1457
AclWI	GGATC	4 cut(s)	59, 87, 130, 283
AcoI	YGGCCR	2 cut(s)	105, 1589
AcsI	RAATTY	2 cut(s)	1042, 1069
AcuI	CTGAAG	1 cut(s)	266
AfaI	GTAC	6 cut(s)	670, 788, 933, 1096, 1201, 1520
AfeI	AGCGCT	1 cut(s)	600
AfiI	CCNNNNNNNGG	5 cut(s)	437, 686, 731, 833, 1436
AjnI	CCWGG	1 cut(s)	717
AluBI	AGCT	9 cut(s)	302, 428, 830, 869, 1454, 1485, 1502, 1580, 1709
AluI	AGCT	9 cut(s)	302, 428, 830, 869, 1454, 1485, 1502, 1580, 1709
Alw21I	GWGCWC	1 cut(s)	534
Alw26I	GTCTC	4 cut(s)	327, 452, 1419, 1745
AlwI	GGATC	4 cut(s)	59, 87, 130, 283
Ama87I	CYCGRG	1 cut(s)	212
Aor13HI	TCCGGA	1 cut(s)	1457
Aor51HI	AGCGCT	1 cut(s)	600
AoxI	GGCC	8 cut(s)	105, 135, 209, 645, 714, 1589, 1720, 1824
ApaI	GGGCCC	1 cut(s)	139
ApeKI	GCWGC	9 cut(s)	37, 72, 144, 217, 581, 1304, 1502, 1580, 1732
ApoI	RAATTY	2 cut(s)	1042, 1069
Asp718I	GGTACC	1 cut(s)	668
AspA2I	CCTAGG	1 cut(s)	575
AspLEI	GCGC	6 cut(s)	6, 26, 64, 66, 407, 601
AspS9I	GGNCC	8 cut(s)	135, 136, 210, 492, 587, 715, 722, 1824
AsuC2I	CCSGG	2 cut(s)	213, 214
AsuHPI	GGTGA	5 cut(s)	68, 422, 763, 1030, 1579
AvaI	CYCGRG	1 cut(s)	212
AvaII	GGWCC	3 cut(s)	492, 587, 722
AvrII	CCTAGG	1 cut(s)	575
AxyI	CCTNAGG	1 cut(s)	642
BaeGI	GKGCMC	1 cut(s)	139
BalI	TGGCCA	1 cut(s)	107
BanI	GGYRCC	1 cut(s)	668
BanII	GRGCYC	1 cut(s)	139
Bbv12I	GWGCWC	1 cut(s)	534
BbvI	GCAGC	9 cut(s)	24, 59, 131, 204, 568, 1291, 1489, 1567, 1744
BccI	CCATC	9 cut(s)	305, 477, 658, 741, 915, 1002, 1232, 1366, 1787
BceAI	ACGGC	2 cut(s)	430, 513
BcgI	CGANNNNNNTGC	2 cut(s)	154, 188
BciT130I	CCWGG	1 cut(s)	719
BcnI	CCSGG	2 cut(s)	213, 214
BcoDI	GTCTC	4 cut(s)	327, 452, 1419, 1745
BfaI	CTAG	5 cut(s)	272, 504, 576, 596, 1812
BfmI	CTRYAG	6 cut(s)	38, 145, 657, 898, 1503, 1710
BfoI	RGCGCY	2 cut(s)	408, 602
BfuAI	ACCTGC	1 cut(s)	138
BglII	AGATCT	1 cut(s)	1798
BlnI	CCTAGG	1 cut(s)	575
BlpI	GCTNAGC	1 cut(s)	1481
Bme1390I	CCNGG	3 cut(s)	213, 214, 719
Bme18I	GGWCC	3 cut(s)	492, 587, 722
BmeT110I	CYCGRG	1 cut(s)	212
BmgT120I	GGNCC	8 cut(s)	135, 136, 210, 492, 587, 715, 722, 1824
BmiI	GGNNCC	9 cut(s)	137, 187, 514, 589, 670, 723, 999, 1426, 1621
BmrFI	CCNGG	3 cut(s)	213, 214, 719
BmrI	ACTGGG	3 cut(s)	785, 1212, 1424
BmsI	GCATC	5 cut(s)	49, 85, 1582, 1592, 1719
BmuI	ACTGGG	3 cut(s)	785, 1212, 1424
BpmI	CTGGAG	1 cut(s)	226
Bpu10I	CCTNAGC	1 cut(s)	303
Bpu1102I	GCTNAGC	1 cut(s)	1481
BpuEI	CTTGAG	1 cut(s)	1667
BpuMI	CCSGG	2 cut(s)	213, 214
BsaI	GGTCTC	1 cut(s)	1419
BsaJI	CCNNGG	6 cut(s)	212, 495, 575, 717, 718, 1137
BsaWI	WCCGGW	1 cut(s)	1457
BsaXI	ACNNNNNCTCC	2 cut(s)	404, 434
Bsc4I	CCNNNNNNNGG	5 cut(s)	437, 686, 731, 833, 1436
Bse118I	RCCGGY	1 cut(s)	584
Bse1I	ACTGG	4 cut(s)	791, 1043, 1207, 1430
Bse21I	CCTNAGG	1 cut(s)	642
BseAI	TCCGGA	1 cut(s)	1457
BseBI	CCWGG	1 cut(s)	719
BseDI	CCNNGG	6 cut(s)	212, 495, 575, 717, 718, 1137
BseGI	GGATG	9 cut(s)	100, 259, 752, 926, 1332, 1377, 1392, 1573, 1773
BseLI	CCNNNNNNNGG	5 cut(s)	437, 686, 731, 833, 1436
BseMII	CTCAG	4 cut(s)	317, 633, 1386, 1464
BseNI	ACTGG	4 cut(s)	791, 1043, 1207, 1430
BsePI	GCGCGC	1 cut(s)	62
BseSI	GKGCMC	1 cut(s)	139
BseXI	GCAGC	9 cut(s)	24, 59, 131, 204, 568, 1291, 1489, 1567, 1744
BseYI	CCCAGC	2 cut(s)	75, 118
BsgI	GTGCAG	1 cut(s)	35
Bsh1236I	CGCG	4 cut(s)	6, 26, 64, 399
BshFI	GGCC	8 cut(s)	107, 137, 211, 647, 716, 1591, 1722, 1826
BshNI	GGYRCC	1 cut(s)	668
BsiHKAI	GWGCWC	1 cut(s)	534
BsiHKCI	CYCGRG	1 cut(s)	212
BsiSI	CCGG	4 cut(s)	213, 585, 1104, 1458
BslFI	GGGAC	2 cut(s)	573, 987
BslI	CCNNNNNNNGG	5 cut(s)	437, 686, 731, 833, 1436
BsmAI	GTCTC	4 cut(s)	327, 452, 1419, 1745
BsmFI	GGGAC	2 cut(s)	573, 987
BsmI	GAATGC	1 cut(s)	1635
BsnI	GGCC	8 cut(s)	107, 137, 211, 647, 716, 1591, 1722, 1826
Bso31I	GGTCTC	1 cut(s)	1419
BsoBI	CYCGRG	1 cut(s)	212
Bsp120I	GGGCCC	1 cut(s)	135
Bsp1286I	GDGCHC	2 cut(s)	139, 534
Bsp13I	TCCGGA	1 cut(s)	1457
Bsp143I	GATC	9 cut(s)	51, 79, 122, 191, 275, 1219, 1716, 1789, 1798
Bsp1720I	GCTNAGC	1 cut(s)	1481
BspANI	GGCC	8 cut(s)	107, 137, 211, 647, 716, 1591, 1722, 1826
BspCNI	CTCAG	4 cut(s)	316, 634, 1387, 1463
BspEI	TCCGGA	1 cut(s)	1457
BspFNI	CGCG	4 cut(s)	6, 26, 64, 399
BspLI	GGNNCC	9 cut(s)	137, 187, 514, 589, 670, 723, 999, 1426, 1621
BspMAI	CTGCAG	4 cut(s)	42, 149, 661, 1507
BspMI	ACCTGC	1 cut(s)	138
BspPI	GGATC	4 cut(s)	59, 87, 130, 283
BspT107I	GGYRCC	1 cut(s)	668
BspTNI	GGTCTC	1 cut(s)	1419
BsrFI	RCCGGY	1 cut(s)	584
BsrI	ACTGG	4 cut(s)	791, 1043, 1207, 1430
BssAI	RCCGGY	1 cut(s)	584
BssECI	CCNNGG	6 cut(s)	212, 495, 575, 717, 718, 1137
BssHII	GCGCGC	1 cut(s)	62
BssMI	GATC	9 cut(s)	51, 79, 122, 191, 275, 1219, 1716, 1789, 1798
BssT1I	CCWWGG	2 cut(s)	575, 1137
Bst2UI	CCWGG	1 cut(s)	719
Bst4CI	ACNGT	4 cut(s)	297, 450, 1523, 1615
Bst6I	CTCTTC	1 cut(s)	1754
BstAPI	GCANNNNNTGC	2 cut(s)	72, 349
BstC8I	GCNNGC	4 cut(s)	42, 64, 242, 261
BstDEI	CTNAG	5 cut(s)	303, 642, 1395, 1450, 1481
BstDSI	CCRYGG	1 cut(s)	495
BstF5I	GGATG	9 cut(s)	100, 259, 752, 926, 1332, 1377, 1392, 1573, 1773
BstFNI	CGCG	4 cut(s)	6, 26, 64, 399
BstH2I	RGCGCY	2 cut(s)	408, 602
BstHHI	GCGC	6 cut(s)	6, 26, 64, 66, 407, 601
BstKTI	GATC	9 cut(s)	54, 82, 125, 194, 278, 1222, 1719, 1792, 1801
BstMAI	GTCTC	4 cut(s)	327, 452, 1419, 1745
BstMBI	GATC	9 cut(s)	51, 79, 122, 191, 275, 1219, 1716, 1789, 1798
BstMWI	GCNNNNNNNGC	9 cut(s)	72, 104, 217, 241, 349, 827, 866, 1477, 1648
BstNI	CCWGG	1 cut(s)	719
BstNSI	RCATGY	1 cut(s)	169
BstSCI	CCNGG	3 cut(s)	211, 212, 717
BstSFI	CTRYAG	6 cut(s)	38, 145, 657, 898, 1503, 1710
BstSLI	GKGCMC	1 cut(s)	139
BstUI	CGCG	4 cut(s)	6, 26, 64, 399
BstV1I	GCAGC	9 cut(s)	24, 59, 131, 204, 568, 1291, 1489, 1567, 1744
BstX2I	RGATCY	3 cut(s)	122, 275, 1798
BstXI	CCANNNNNNTGG	2 cut(s)	523, 630
BstYI	RGATCY	3 cut(s)	122, 275, 1798
Bsu36I	CCTNAGG	1 cut(s)	642
BsuRI	GGCC	8 cut(s)	107, 137, 211, 647, 716, 1591, 1722, 1826
BtgI	CCRYGG	1 cut(s)	495
BtgZI	GCGATG	2 cut(s)	449, 1325
BtsCI	GGATG	9 cut(s)	100, 259, 752, 926, 1332, 1377, 1392, 1573, 1773
BtsI	GCAGTG	3 cut(s)	235, 867, 1354
BtsIMutI	CAGTG	4 cut(s)	235, 446, 867, 1354
BveI	ACCTGC	1 cut(s)	138
Cac8I	GCNNGC	4 cut(s)	42, 64, 242, 261
CfoI	GCGC	6 cut(s)	6, 26, 64, 66, 407, 601
Cfr10I	RCCGGY	1 cut(s)	584
Cfr13I	GGNCC	8 cut(s)	135, 136, 210, 492, 587, 715, 722, 1824
Cfr9I	CCCGGG	1 cut(s)	212
Csp6I	GTAC	6 cut(s)	669, 787, 932, 1095, 1200, 1519
CspCI	CAANNNNNGTGG	2 cut(s)	837, 872
CviAII	CATG	3 cut(s)	166, 673, 1805
CviQI	GTAC	6 cut(s)	669, 787, 932, 1095, 1200, 1519
DdeI	CTNAG	5 cut(s)	303, 642, 1395, 1450, 1481
DpnI	GATC	9 cut(s)	53, 81, 124, 193, 277, 1221, 1718, 1791, 1800
DpnII	GATC	9 cut(s)	51, 79, 122, 191, 275, 1219, 1716, 1789, 1798
EaeI	YGGCCR	2 cut(s)	105, 1589
Eam1104I	CTCTTC	1 cut(s)	1754
EarI	CTCTTC	1 cut(s)	1754
EciI	GGCGGA	1 cut(s)	1629
Eco130I	CCWWGG	2 cut(s)	575, 1137
Eco147I	AGGCCT	1 cut(s)	647
Eco24I	GRGCYC	1 cut(s)	139
Eco31I	GGTCTC	1 cut(s)	1419
Eco47I	GGWCC	3 cut(s)	492, 587, 722
Eco47III	AGCGCT	1 cut(s)	600
Eco57I	CTGAAG	1 cut(s)	266
Eco81I	CCTNAGG	1 cut(s)	642
Eco88I	CYCGRG	1 cut(s)	212
EcoRII	CCWGG	1 cut(s)	717
EcoT14I	CCWWGG	2 cut(s)	575, 1137
EcoT22I	ATGCAT	1 cut(s)	345
EcoT38I	GRGCYC	1 cut(s)	139
ErhI	CCWWGG	2 cut(s)	575, 1137
FaeI	CATG	3 cut(s)	169, 676, 1808
FaqI	GGGAC	2 cut(s)	573, 987
FatI	CATG	3 cut(s)	165, 672, 1804
FauI	CCCGC	2 cut(s)	83, 256
FauNDI	CATATG	3 cut(s)	339, 345, 1747
FblI	GTMKAC	2 cut(s)	292, 1024
FokI	GGATG	9 cut(s)	107, 266, 759, 933, 1339, 1384, 1399, 1560, 1780
FriOI	GRGCYC	1 cut(s)	139
FspBI	CTAG	5 cut(s)	272, 504, 576, 596, 1812
GlaI	GCGC	6 cut(s)	5, 25, 63, 65, 406, 600
GsaI	CCCAGC	2 cut(s)	79, 122
GsuI	CTGGAG	1 cut(s)	226
HaeII	RGCGCY	2 cut(s)	408, 602
HaeIII	GGCC	8 cut(s)	107, 137, 211, 647, 716, 1591, 1722, 1826
HapII	CCGG	4 cut(s)	213, 585, 1104, 1458
HhaI	GCGC	6 cut(s)	6, 26, 64, 66, 407, 601
Hin1II	CATG	3 cut(s)	169, 676, 1808
Hin6I	GCGC	6 cut(s)	4, 24, 62, 64, 405, 599
HinP1I	GCGC	6 cut(s)	4, 24, 62, 64, 405, 599
HincII	GTYRAC	1 cut(s)	453
HindII	GTYRAC	1 cut(s)	453
HindIII	AAGCTT	1 cut(s)	1483
HinfI	GANTC	9 cut(s)	460, 768, 852, 1021, 1085, 1294, 1352, 1461, 1600
HpaII	CCGG	4 cut(s)	213, 585, 1104, 1458
HphI	GGTGA	5 cut(s)	68, 422, 763, 1030, 1579
Hpy166II	GTNNAC	7 cut(s)	293, 453, 842, 1025, 1036, 1097, 1233
Hpy188I	TCNGA	5 cut(s)	370, 380, 1252, 1678, 1789
Hpy188III	TCNNGA	9 cut(s)	175, 189, 476, 542, 1005, 1223, 1458, 1490, 1817
Hpy8I	GTNNAC	7 cut(s)	293, 453, 842, 1025, 1036, 1097, 1233
Hpy99I	CGWCG	1 cut(s)	144
HpyAV	CCTTC	4 cut(s)	241, 503, 602, 1011
HpyCH4III	ACNGT	4 cut(s)	297, 450, 1523, 1615
HpyF10VI	GCNNNNNNNGC	9 cut(s)	72, 104, 217, 241, 349, 827, 866, 1477, 1648
HpyF3I	CTNAG	5 cut(s)	303, 642, 1395, 1450, 1481
Hsp92II	CATG	3 cut(s)	169, 676, 1808
HspAI	GCGC	6 cut(s)	4, 24, 62, 64, 405, 599
Kpn2I	TCCGGA	1 cut(s)	1457
KpnI	GGTACC	1 cut(s)	672
Kzo9I	GATC	9 cut(s)	51, 79, 122, 191, 275, 1219, 1716, 1789, 1798
LmnI	GCTCC	3 cut(s)	433, 518, 997
Lsp1109I	GCAGC	9 cut(s)	24, 59, 131, 204, 568, 1291, 1489, 1567, 1744
LweI	GCATC	5 cut(s)	49, 85, 1582, 1592, 1719
MaeI	CTAG	5 cut(s)	272, 504, 576, 596, 1812
MaeIII	GTNAC	3 cut(s)	410, 1241, 1349
MalI	GATC	9 cut(s)	53, 81, 124, 193, 277, 1221, 1718, 1791, 1800
MboI	GATC	9 cut(s)	51, 79, 122, 191, 275, 1219, 1716, 1789, 1798
MboII	GAAGA	4 cut(s)	702, 1174, 1771, 1793
MfeI	CAATTG	1 cut(s)	353
MflI	RGATCY	3 cut(s)	122, 275, 1798
MhlI	GDGCHC	2 cut(s)	139, 534
MlsI	TGGCCA	1 cut(s)	107
MluCI	AATT	9 cut(s)	353, 442, 485, 984, 1042, 1069, 1194, 1263, 1653
MluNI	TGGCCA	1 cut(s)	107
MlyI	GAGTC	5 cut(s)	454, 777, 1030, 1346, 1470
MmeI	TCCRAC	6 cut(s)	975, 1153, 1271, 1507, 1588, 1597
Mox20I	TGGCCA	1 cut(s)	107
Mph1103I	ATGCAT	1 cut(s)	345
MroI	TCCGGA	1 cut(s)	1457
MscI	TGGCCA	1 cut(s)	107
MseI	TTAA	6 cut(s)	318, 761, 893, 908, 1193, 1835
MslI	CAYNNNNRTG	1 cut(s)	521
Msp20I	TGGCCA	1 cut(s)	107
MspA1I	CMGCKG	1 cut(s)	1580
MspI	CCGG	4 cut(s)	213, 585, 1104, 1458
MspR9I	CCNGG	3 cut(s)	213, 214, 719
MunI	CAATTG	1 cut(s)	353
Mva1269I	GAATGC	1 cut(s)	1635
MvaI	CCWGG	1 cut(s)	719
MvnI	CGCG	4 cut(s)	6, 26, 64, 399
MwoI	GCNNNNNNNGC	9 cut(s)	72, 104, 217, 241, 349, 827, 866, 1477, 1648
NciI	CCSGG	2 cut(s)	213, 214
NdeI	CATATG	3 cut(s)	339, 345, 1747
NdeII	GATC	9 cut(s)	51, 79, 122, 191, 275, 1219, 1716, 1789, 1798
NlaIII	CATG	3 cut(s)	169, 676, 1808
NlaIV	GGNNCC	9 cut(s)	137, 187, 514, 589, 670, 723, 999, 1426, 1621
NmeAIII	GCCGAG	1 cut(s)	1567
NmuCI	GTSAC	2 cut(s)	410, 1349
NsiI	ATGCAT	1 cut(s)	345
NspI	RCATGY	1 cut(s)	169
PaqCI	CACCTGC	1 cut(s)	138
PasI	CCCWGGG	1 cut(s)	718
PauI	GCGCGC	1 cut(s)	62
PceI	AGGCCT	1 cut(s)	647
PctI	GAATGC	1 cut(s)	1635
PfeI	GAWTC	4 cut(s)	852, 1085, 1294, 1600
PflMI	CCANNNNNTGG	1 cut(s)	1436
PleI	GAGTC	5 cut(s)	454, 776, 1029, 1346, 1469
PpsI	GAGTC	5 cut(s)	454, 776, 1029, 1346, 1469
PsiI	TTATAA	1 cut(s)	1556
Psp6I	CCWGG	1 cut(s)	717
PspFI	CCCAGC	2 cut(s)	75, 118
PspGI	CCWGG	1 cut(s)	717
PspN4I	GGNNCC	9 cut(s)	137, 187, 514, 589, 670, 723, 999, 1426, 1621
PspOMI	GGGCCC	1 cut(s)	135
PspPI	GGNCC	8 cut(s)	135, 136, 210, 492, 587, 715, 722, 1824
PstI	CTGCAG	4 cut(s)	42, 149, 661, 1507
PsuI	RGATCY	3 cut(s)	122, 275, 1798
PteI	GCGCGC	1 cut(s)	62
PvuII	CAGCTG	1 cut(s)	1580
RsaI	GTAC	6 cut(s)	670, 788, 933, 1096, 1201, 1520
RsaNI	GTAC	6 cut(s)	669, 787, 932, 1095, 1200, 1519
RseI	CAYNNNNRTG	1 cut(s)	521
SaqAI	TTAA	6 cut(s)	318, 761, 893, 908, 1193, 1835
Sau3AI	GATC	9 cut(s)	51, 79, 122, 191, 275, 1219, 1716, 1789, 1798
Sau96I	GGNCC	8 cut(s)	135, 136, 210, 492, 587, 715, 722, 1824
SchI	GAGTC	5 cut(s)	454, 777, 1030, 1346, 1470
ScrFI	CCNGG	3 cut(s)	213, 214, 719
SduI	GDGCHC	2 cut(s)	139, 534
SfaNI	GCATC	5 cut(s)	49, 85, 1582, 1592, 1719
SfcI	CTRYAG	6 cut(s)	38, 145, 657, 898, 1503, 1710
SinI	GGWCC	3 cut(s)	492, 587, 722
SmaI	CCCGGG	1 cut(s)	214
SmiMI	CAYNNNNRTG	1 cut(s)	521
SmlI	CTYRAG	1 cut(s)	1682
SmoI	CTYRAG	1 cut(s)	1682
SrfI	GCCCGGGC	1 cut(s)	214
Sse9I	AATT	9 cut(s)	353, 442, 485, 984, 1042, 1069, 1194, 1263, 1653
SseBI	AGGCCT	1 cut(s)	647
SspI	AATATT	1 cut(s)	1560
SspMI	CTAG	5 cut(s)	272, 504, 576, 596, 1812
StuI	AGGCCT	1 cut(s)	647
StyD4I	CCNGG	3 cut(s)	211, 212, 717
StyI	CCWWGG	2 cut(s)	575, 1137
TaaI	ACNGT	4 cut(s)	297, 450, 1523, 1615
TasI	AATT	9 cut(s)	353, 442, 485, 984, 1042, 1069, 1194, 1263, 1653
TatI	WGTACW	3 cut(s)	931, 1094, 1518
TauI	GCSGC	1 cut(s)	1310
TfiI	GAWTC	4 cut(s)	852, 1085, 1294, 1600
Tru1I	TTAA	6 cut(s)	318, 761, 893, 908, 1193, 1835
Tru9I	TTAA	6 cut(s)	318, 761, 893, 908, 1193, 1835
TscAI	CASTG	4 cut(s)	235, 453, 867, 1354
TseFI	GTSAC	2 cut(s)	410, 1349
TseI	GCWGC	9 cut(s)	37, 72, 144, 217, 581, 1304, 1502, 1580, 1732
Tsp45I	GTSAC	2 cut(s)	410, 1349
TspDTI	ATGAA	6 cut(s)	354, 399, 616, 1534, 1784, 1793
TspGWI	ACGGA	1 cut(s)	420
TspMI	CCCGGG	1 cut(s)	212
TspRI	CASTG	4 cut(s)	235, 453, 867, 1354
Van91I	CCANNNNNTGG	1 cut(s)	1436
VpaK11BI	GGWCC	3 cut(s)	492, 587, 722
XapI	RAATTY	2 cut(s)	1042, 1069
XceI	RCATGY	1 cut(s)	169
XcmI	CCANNNNNNNNNTGG	1 cut(s)	115
XmaI	CCCGGG	1 cut(s)	212
XmaJI	CCTAGG	1 cut(s)	575
XmiI	GTMKAC	2 cut(s)	292, 1024
XspI	CTAG	5 cut(s)	272, 504, 576, 596, 1812
Zsp2I	ATGCAT	1 cut(s)	345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.