Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001720

Physical Location & Seq

Genomic Coordinates Forward (+)

40030730 .. 40042351

Gene Structure 11622 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002797

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGTTTCACAACCCTAGCAGAGCACGTAGACGGCAAGGTTCATCGGATAGTGTCCGAGATGAAACAGAACAACGCGGCGGCGCTGGTGACGGCAACTCCATAGCTCCGTCTTTCGGTAATTCACTGTCAACAGAGACTCATCGTCATCATCAAGAACAGAAATTTAGGACCACGGCAACTAGGGAAGGCTCCATTGAAATGGGAGAGCACAACAATCCCGAATATGTTGCAGTTAGTGAAGCACAATCCCCTAGGGTAAATAACTCCAAGAAAGTCTCAGTTCTGCCCCTTGTCTTCCTCATCTTCTATGAGGTATCTGGGGGTCCATTTGGTATTGAGGACAGTGTTCAGGCTGCCGGTCCCCTTCTAGCGCTTCTCGGGTTCTTGGTCTTTCCATTCATTTGGAGTGTTCCTGAGGCCTTGATTACTGCAGAGATGGGTACCATGTTCCCCGTGAATGGGGGTTATGTGGTTTGGGTTTCTTCCGCCCTGGGTCCATTTTGGGGGTTTCAACAAGGATGGATGAAATGGTTAAGTGGAGTCATTGATAATGCTTTGTATCCAGTTCTGTTTTTGGACTACTTGAAATCAGCAATACCGGCTTTAGGTGGTGGACTTCCAAGAATCGTGGCAGTGTTAGCTTTGACATTGTTCCTCACTTACTTAAACTATAGGGGTTTAACCATTGTGGGATGGGTTGCTGTACTTTTGGGGATTTTCTCAATCATTCCTTTTGTGGTTATGGGACTTGTGGCAATTCCCAAGTTGGAGCCTTCAAGATGGTTAGTGGTGAGTCTACATAATGTGGACTGGAATTTGTATTTGAACACTCTCTTTTGGAATTTGAACTATTGGGATTCTATAAGTACACTTGCCGGAGAGGTGGAGAACCCAAAGAAAACTCTCCCCAAGGCTCTTTTTTATGCGTTGATTTTGGTTGTTGTTGGATATTTCTTCCCCCTTTTAATTGGTACTGGGGCTGTTCCACTTGATCGTGAGTTGTGGACTGATGGTTATTTCTCTGATATTGCAAAAATTGTTGGGGGAGTTTGGTTGAGAAGTTGGATCCAAGGGGCTGCGGCGATGTCAAATATGGGGATGTTTGTGGCTGAAATGAGCAGTGACTCTTTTCAACTTCTTGGGATGGCAGAAAGAGGGATGTTGCCTGAGTTCTTTGGTAAGCGGTCTCGTTATGGAACCCCAGTCATTGGCATTATGTTCTCAGCTTCTGGAGTCCTTTTGCTATCTTGGCTAAGCTTTCAAGAGATTGTAGCTGCAGAAAACTTCTTGTACTGTGTTGGAATGATTTTGGAGTTCATAGCATTTATAGTATTACGGGTGAAGCATCCAGCTGCATCTCGGCCATACAAGATTCCTGTTGGAACAGTTGGAACCATTCTTTTGTGCATTCCGCCAACCCTGCTAATTGGTGTAGTGTTGGCTCTTTCTGAACTCAAGGTTGTGGTTGTGAGCCTTATAGCTATAGTGATCGGCCTTGTGATGCAGCCCTGTCTCACATATGTTGAGAGGAAGAGGTGGATGAAGTTCTCCACCAGTTCTGATCTCCCAGATCTTCATGGTGCTAATCAGGAGAGTGCCAACTCCTTAATAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006082 GO:0006520 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0006928 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015171 GO:0015179 GO:0015203 GO:0015291 GO:0015297 GO:0015318 GO:0015711 GO:0015807 GO:0015846 GO:0015849 GO:0016020 GO:0016021 GO:0016043 GO:0016477 GO:0019752 GO:0022607 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0040011 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0048870 GO:0050900 GO:0051179 GO:0051234 GO:0051674 GO:0055085 GO:0065003 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0098656 GO:1901564 GO:1902047 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2

Protein Analysis

539

Amino Acids

59.17

Weight (kDa)

6.28

Isoelectric Point (pI)

41.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	95 - 476	3.6e-40	Amino acid permease
AA_permease	PF00324	112 - 481	1.8e-21	Amino acid permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31820 AT1G31830 AT1G31830 AT5G05630
fragaria_vesca	FvH4_2g15680 FvH4_2g15680 FvH4_4g35270 FvH4_5g24050 FvH4_5g24050
malus_domestica	MD06G1016700.v1.1 MD17G1241900.v1.1
prunus_persica	Prupe.5G019700_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1
pyrus_communis	pycom05g11950 pycom06g01360 pycom10g10980
rosa_chinensis	RchiOBHm_Chr6g0278981 RchiOBHm_Chr7g0213541 RchiOBHm_Chr7g0243451
rosa_laevigata	RLG00000002797 RLG00000013178
rosa_multiflora	Rmu_co8436609.1_g000001 Rmu_sc0002080.1_g000041 Rmu_sc0008539.1_g000001 Rmu_sc0009618.1_g000016 Rmu_sc0010076.1_g000001
rosa_roxburghii	Rroxscaffold_3G00245800 Rroxscaffold_7G00189290
rosa_rugosa	Rorug06G0120600 Rorug07G0142700 Rorug07G0142800 Rorug07G0319500
rosa_samantha	Rh6AG229300 Rh6BG234500 Rh6CG236700 Rh6DG228300 Rh7AG276000 Rh7BG270400 Rh7BG445400 Rh7CG294900 Rh7DG282600
rosa_wichuraiana	Rw0G023490 Rw6G020080 Rw7G023850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	440
AccB1I	GGYRCC	1 cut(s)	440
AccB7I	CCANNNNNTGG	1 cut(s)	1208
AccI	GTMKAC	2 cut(s)	28, 796
AccII	CGCG	1 cut(s)	75
AciI	CCGC	6 cut(s)	75, 78, 486, 1079, 1183, 1412
AclWI	GGATC	2 cut(s)	1060, 1073
AcoI	YGGCCR	1 cut(s)	1361
AcsI	RAATTY	3 cut(s)	161, 814, 841
AfaI	GTAC	5 cut(s)	442, 705, 868, 973, 1292
AfeI	AGCGCT	1 cut(s)	372
AfiI	CCNNNNNNNGG	6 cut(s)	113, 458, 459, 503, 605, 1208
AgsI	TTSAA	8 cut(s)	197, 512, 586, 777, 826, 847, 1133, 1262
AhdI	GACNNNNNGTC	1 cut(s)	141
AjnI	CCWGG	1 cut(s)	489
AluBI	AGCT	7 cut(s)	104, 641, 1226, 1257, 1274, 1352, 1481
AluI	AGCT	7 cut(s)	104, 641, 1226, 1257, 1274, 1352, 1481
Alw21I	GWGCWC	2 cut(s)	25, 210
Alw26I	GTCTC	4 cut(s)	128, 280, 1191, 1517
AlwI	GGATC	2 cut(s)	1060, 1073
AlwNI	CAGNNNCTG	1 cut(s)	1229
Ama87I	CYCGRG	1 cut(s)	377
Aor51HI	AGCGCT	1 cut(s)	372
AoxI	GGCC	3 cut(s)	417, 1361, 1492
ApeKI	GCWGC	5 cut(s)	353, 1076, 1274, 1352, 1504
ApoI	RAATTY	3 cut(s)	161, 814, 841
Asp718I	GGTACC	1 cut(s)	440
AspA2I	CCTAGG	1 cut(s)	251
AspLEI	GCGC	2 cut(s)	83, 373
AspS9I	GGNCC	4 cut(s)	168, 323, 359, 494
AsuHPI	GGTGA	3 cut(s)	98, 802, 1351
AvaI	CYCGRG	1 cut(s)	377
AvaII	GGWCC	4 cut(s)	168, 323, 359, 494
AvrII	CCTAGG	1 cut(s)	251
AxyI	CCTNAGG	1 cut(s)	414
BamHI	GGATCC	1 cut(s)	1065
BanI	GGYRCC	1 cut(s)	440
BbsI	GAAGAC	1 cut(s)	286
Bbv12I	GWGCWC	2 cut(s)	25, 210
BbvI	GCAGC	5 cut(s)	340, 1063, 1261, 1339, 1516
BccI	CCATC	6 cut(s)	430, 513, 687, 774, 1004, 1138
BceAI	ACGGC	3 cut(s)	47, 106, 189
BcgI	CGANNNNNNTGC	2 cut(s)	209, 243
BciT130I	CCWGG	1 cut(s)	491
BciVI	GTATCC	1 cut(s)	570
BcoDI	GTCTC	4 cut(s)	128, 280, 1191, 1517
BfaI	CTAG	4 cut(s)	15, 180, 252, 368
BfmI	CTRYAG	4 cut(s)	429, 670, 1275, 1482
BfoI	RGCGCY	2 cut(s)	84, 374
BfuI	GTATCC	1 cut(s)	570
BglII	AGATCT	1 cut(s)	1570
BisI	GCNGC	8 cut(s)	76, 79, 354, 1077, 1080, 1275, 1353, 1505
BlnI	CCTAGG	1 cut(s)	251
BlpI	GCTNAGC	1 cut(s)	1253
BlsI	GCNGC	8 cut(s)	77, 80, 355, 1078, 1081, 1276, 1354, 1506
Bme1390I	CCNGG	1 cut(s)	491
Bme18I	GGWCC	4 cut(s)	168, 323, 359, 494
BmeRI	GACNNNNNGTC	1 cut(s)	141
BmeT110I	CYCGRG	1 cut(s)	377
BmgT120I	GGNCC	4 cut(s)	168, 323, 359, 494
BmiI	GGNNCC	9 cut(s)	190, 324, 361, 442, 495, 771, 1067, 1198, 1393
BmrFI	CCNGG	1 cut(s)	491
BmrI	ACTGGG	2 cut(s)	984, 1196
BmsI	GCATC	3 cut(s)	1354, 1364, 1491
BmuI	ACTGGG	2 cut(s)	984, 1196
BpiI	GAAGAC	1 cut(s)	286
BpmI	CTGGAG	1 cut(s)	1251
Bpu1102I	GCTNAGC	1 cut(s)	1253
BpuEI	CTTGAG	1 cut(s)	1439
BsaAI	YACGTR	1 cut(s)	26
BsaI	GGTCTC	1 cut(s)	1191
BsaJI	CCNNGG	6 cut(s)	171, 251, 489, 490, 909, 1069
BsaXI	ACNNNNNCTCC	2 cut(s)	80, 110
Bsc4I	CCNNNNNNNGG	6 cut(s)	113, 458, 459, 503, 605, 1208
Bse118I	RCCGGY	2 cut(s)	356, 598
Bse1I	ACTGG	5 cut(s)	563, 815, 979, 1202, 1554
Bse21I	CCTNAGG	1 cut(s)	414
BseBI	CCWGG	1 cut(s)	491
BseDI	CCNNGG	6 cut(s)	171, 251, 489, 490, 909, 1069
BseGI	GGATG	8 cut(s)	524, 528, 698, 1104, 1149, 1164, 1345, 1545
BseLI	CCNNNNNNNGG	6 cut(s)	113, 458, 459, 503, 605, 1208
BseMII	CTCAG	4 cut(s)	291, 405, 1158, 1236
BseNI	ACTGG	5 cut(s)	563, 815, 979, 1202, 1554
BseXI	GCAGC	5 cut(s)	340, 1063, 1261, 1339, 1516
Bsh1236I	CGCG	1 cut(s)	75
BshFI	GGCC	3 cut(s)	419, 1363, 1494
BshNI	GGYRCC	1 cut(s)	440
BsiHKAI	GWGCWC	2 cut(s)	25, 210
BsiHKCI	CYCGRG	1 cut(s)	377
BsiSI	CCGG	3 cut(s)	357, 599, 876
BslFI	GGGAC	2 cut(s)	345, 759
BslI	CCNNNNNNNGG	6 cut(s)	113, 458, 459, 503, 605, 1208
BsmAI	GTCTC	4 cut(s)	128, 280, 1191, 1517
BsmFI	GGGAC	2 cut(s)	345, 759
BsmI	GAATGC	1 cut(s)	1407
BsnI	GGCC	3 cut(s)	419, 1363, 1494
Bso31I	GGTCTC	1 cut(s)	1191
BsoBI	CYCGRG	1 cut(s)	377
Bsp1286I	GDGCHC	2 cut(s)	25, 210
Bsp143I	GATC	5 cut(s)	991, 1065, 1488, 1561, 1570
Bsp1720I	GCTNAGC	1 cut(s)	1253
BspACI	CCGC	6 cut(s)	75, 78, 486, 1079, 1183, 1412
BspANI	GGCC	3 cut(s)	419, 1363, 1494
BspCNI	CTCAG	4 cut(s)	290, 406, 1159, 1235
BspFNI	CGCG	1 cut(s)	75
BspLI	GGNNCC	9 cut(s)	190, 324, 361, 442, 495, 771, 1067, 1198, 1393
BspMAI	CTGCAG	2 cut(s)	433, 1279
BspPI	GGATC	2 cut(s)	1060, 1073
BspT107I	GGYRCC	1 cut(s)	440
BspTNI	GGTCTC	1 cut(s)	1191
BsrFI	RCCGGY	2 cut(s)	356, 598
BsrI	ACTGG	5 cut(s)	563, 815, 979, 1202, 1554
BssAI	RCCGGY	2 cut(s)	356, 598
BssECI	CCNNGG	6 cut(s)	171, 251, 489, 490, 909, 1069
BssMI	GATC	5 cut(s)	991, 1065, 1488, 1561, 1570
BssT1I	CCWWGG	3 cut(s)	251, 909, 1069
Bst2UI	CCWGG	1 cut(s)	491
Bst4CI	ACNGT	4 cut(s)	126, 344, 1295, 1387
Bst6I	CTCTTC	1 cut(s)	1526
BstBAI	YACGTR	1 cut(s)	26
BstDEI	CTNAG	5 cut(s)	277, 414, 1167, 1222, 1253
BstDSI	CCRYGG	1 cut(s)	171
BstF5I	GGATG	8 cut(s)	524, 528, 698, 1104, 1149, 1164, 1345, 1545
BstFNI	CGCG	1 cut(s)	75
BstH2I	RGCGCY	2 cut(s)	84, 374
BstHHI	GCGC	2 cut(s)	83, 373
BstKTI	GATC	5 cut(s)	994, 1068, 1491, 1564, 1573
BstMAI	GTCTC	4 cut(s)	128, 280, 1191, 1517
BstMBI	GATC	5 cut(s)	991, 1065, 1488, 1561, 1570
BstMWI	GCNNNNNNNGC	4 cut(s)	599, 638, 1249, 1420
BstNI	CCWGG	1 cut(s)	491
BstSCI	CCNGG	1 cut(s)	489
BstSFI	CTRYAG	4 cut(s)	429, 670, 1275, 1482
BstUI	CGCG	1 cut(s)	75
BstV1I	GCAGC	5 cut(s)	340, 1063, 1261, 1339, 1516
BstV2I	GAAGAC	1 cut(s)	286
BstX2I	RGATCY	2 cut(s)	1065, 1570
BstXI	CCANNNNNNTGG	2 cut(s)	199, 402
BstYI	RGATCY	2 cut(s)	1065, 1570
Bsu36I	CCTNAGG	1 cut(s)	414
BsuI	GTATCC	1 cut(s)	570
BsuRI	GGCC	3 cut(s)	419, 1363, 1494
BtgI	CCRYGG	1 cut(s)	171
BtgZI	GCGATG	1 cut(s)	1097
BtsCI	GGATG	8 cut(s)	524, 528, 698, 1104, 1149, 1164, 1345, 1545
BtsI	GCAGTG	2 cut(s)	639, 1126
BtsIMutI	CAGTG	4 cut(s)	122, 349, 639, 1126
CaiI	CAGNNNCTG	1 cut(s)	1229
CfoI	GCGC	2 cut(s)	83, 373
Cfr10I	RCCGGY	2 cut(s)	356, 598
Cfr13I	GGNCC	4 cut(s)	168, 323, 359, 494
Csp6I	GTAC	5 cut(s)	441, 704, 867, 972, 1291
CspCI	CAANNNNNGTGG	2 cut(s)	609, 644
CviAII	CATG	2 cut(s)	445, 1577
CviQI	GTAC	5 cut(s)	441, 704, 867, 972, 1291
DdeI	CTNAG	5 cut(s)	277, 414, 1167, 1222, 1253
DpnI	GATC	5 cut(s)	993, 1067, 1490, 1563, 1572
DpnII	GATC	5 cut(s)	991, 1065, 1488, 1561, 1570
DriI	GACNNNNNGTC	1 cut(s)	141
EaeI	YGGCCR	1 cut(s)	1361
Eam1104I	CTCTTC	1 cut(s)	1526
Eam1105I	GACNNNNNGTC	1 cut(s)	141
EarI	CTCTTC	1 cut(s)	1526
EciI	GGCGGA	2 cut(s)	475, 1401
Eco130I	CCWWGG	3 cut(s)	251, 909, 1069
Eco147I	AGGCCT	1 cut(s)	419
Eco31I	GGTCTC	1 cut(s)	1191
Eco47I	GGWCC	4 cut(s)	168, 323, 359, 494
Eco47III	AGCGCT	1 cut(s)	372
Eco81I	CCTNAGG	1 cut(s)	414
Eco88I	CYCGRG	1 cut(s)	377
EcoRII	CCWGG	1 cut(s)	489
EcoT14I	CCWWGG	3 cut(s)	251, 909, 1069
ErhI	CCWWGG	3 cut(s)	251, 909, 1069
FaeI	CATG	2 cut(s)	448, 1580
FaqI	GGGAC	2 cut(s)	345, 759
FatI	CATG	2 cut(s)	444, 1576
FauNDI	CATATG	1 cut(s)	1519
FblI	GTMKAC	2 cut(s)	28, 796
Fnu4HI	GCNGC	8 cut(s)	76, 79, 354, 1077, 1080, 1275, 1353, 1505
FokI	GGATG	8 cut(s)	531, 535, 705, 1111, 1156, 1171, 1332, 1552
Fsp4HI	GCNGC	8 cut(s)	76, 79, 354, 1077, 1080, 1275, 1353, 1505
FspBI	CTAG	4 cut(s)	15, 180, 252, 368
GlaI	GCGC	2 cut(s)	82, 372
GluI	GCNGC	8 cut(s)	76, 79, 354, 1077, 1080, 1275, 1353, 1505
GsuI	CTGGAG	1 cut(s)	1251
HaeII	RGCGCY	2 cut(s)	84, 374
HaeIII	GGCC	3 cut(s)	419, 1363, 1494
HapII	CCGG	3 cut(s)	357, 599, 876
HhaI	GCGC	2 cut(s)	83, 373
Hin1II	CATG	2 cut(s)	448, 1580
Hin6I	GCGC	2 cut(s)	81, 371
HinP1I	GCGC	2 cut(s)	81, 371
HincII	GTYRAC	1 cut(s)	129
HindII	GTYRAC	1 cut(s)	129
HindIII	AAGCTT	1 cut(s)	1255
HinfI	GANTC	8 cut(s)	136, 540, 624, 793, 857, 1124, 1233, 1372
HpaII	CCGG	3 cut(s)	357, 599, 876
HphI	GGTGA	3 cut(s)	98, 802, 1351
Hpy166II	GTNNAC	7 cut(s)	29, 129, 614, 797, 808, 869, 1005
Hpy188I	TCNGA	5 cut(s)	46, 56, 1024, 1450, 1561
Hpy188III	TCNNGA	8 cut(s)	152, 218, 413, 777, 995, 1230, 1262, 1589
Hpy8I	GTNNAC	7 cut(s)	29, 129, 614, 797, 808, 869, 1005
HpyAV	CCTTC	3 cut(s)	179, 374, 783
HpyCH4III	ACNGT	4 cut(s)	126, 344, 1295, 1387
HpyCH4IV	ACGT	1 cut(s)	25
HpyCH4V	TGCA	7 cut(s)	230, 431, 1031, 1277, 1355, 1407, 1504
HpyF10VI	GCNNNNNNNGC	4 cut(s)	599, 638, 1249, 1420
HpyF3I	CTNAG	5 cut(s)	277, 414, 1167, 1222, 1253
HpySE526I	ACGT	1 cut(s)	25
Hsp92II	CATG	2 cut(s)	448, 1580
HspAI	GCGC	2 cut(s)	81, 371
KpnI	GGTACC	1 cut(s)	444
Kzo9I	GATC	5 cut(s)	991, 1065, 1488, 1561, 1570
LmnI	GCTCC	3 cut(s)	109, 194, 769
Lsp1109I	GCAGC	5 cut(s)	340, 1063, 1261, 1339, 1516
LweI	GCATC	3 cut(s)	1354, 1364, 1491
MaeI	CTAG	4 cut(s)	15, 180, 252, 368
MaeII	ACGT	1 cut(s)	25
MaeIII	GTNAC	2 cut(s)	86, 1121
MalI	GATC	5 cut(s)	993, 1067, 1490, 1563, 1572
MboI	GATC	5 cut(s)	991, 1065, 1488, 1561, 1570
MboII	GAAGA	6 cut(s)	286, 295, 474, 946, 1543, 1565
MflI	RGATCY	2 cut(s)	1065, 1570
MhlI	GDGCHC	2 cut(s)	25, 210
MluCI	AATT	8 cut(s)	118, 161, 756, 814, 841, 966, 1035, 1425
MlyI	GAGTC	5 cut(s)	130, 549, 802, 1118, 1242
MmeI	TCCRAC	6 cut(s)	747, 925, 1043, 1279, 1360, 1369
MnlI	CCTC	9 cut(s)	304, 308, 331, 409, 665, 874, 1148, 1521, 1527
MseI	TTAA	5 cut(s)	533, 665, 680, 965, 1607
MslI	CAYNNNNRTG	1 cut(s)	197
MspA1I	CMGCKG	1 cut(s)	1352
MspI	CCGG	3 cut(s)	357, 599, 876
MspR9I	CCNGG	1 cut(s)	491
Mva1269I	GAATGC	1 cut(s)	1407
MvaI	CCWGG	1 cut(s)	491
MvnI	CGCG	1 cut(s)	75
MwoI	GCNNNNNNNGC	4 cut(s)	599, 638, 1249, 1420
NdeI	CATATG	1 cut(s)	1519
NdeII	GATC	5 cut(s)	991, 1065, 1488, 1561, 1570
NlaIII	CATG	2 cut(s)	448, 1580
NlaIV	GGNNCC	9 cut(s)	190, 324, 361, 442, 495, 771, 1067, 1198, 1393
NmeAIII	GCCGAG	1 cut(s)	1339
NmuCI	GTSAC	2 cut(s)	86, 1121
PasI	CCCWGGG	1 cut(s)	490
PceI	AGGCCT	1 cut(s)	419
PctI	GAATGC	1 cut(s)	1407
PfeI	GAWTC	3 cut(s)	624, 857, 1372
PflMI	CCANNNNNTGG	1 cut(s)	1208
PkrI	GCNGC	8 cut(s)	77, 80, 355, 1078, 1081, 1276, 1354, 1506
PleI	GAGTC	5 cut(s)	130, 548, 801, 1118, 1241
PpsI	GAGTC	5 cut(s)	130, 548, 801, 1118, 1241
Ppu21I	YACGTR	1 cut(s)	26
Psp6I	CCWGG	1 cut(s)	489
PspGI	CCWGG	1 cut(s)	489
PspN4I	GGNNCC	9 cut(s)	190, 324, 361, 442, 495, 771, 1067, 1198, 1393
PspPI	GGNCC	4 cut(s)	168, 323, 359, 494
PstI	CTGCAG	2 cut(s)	433, 1279
PstNI	CAGNNNCTG	1 cut(s)	1229
PsuI	RGATCY	2 cut(s)	1065, 1570
PvuII	CAGCTG	1 cut(s)	1352
RsaI	GTAC	5 cut(s)	442, 705, 868, 973, 1292
RsaNI	GTAC	5 cut(s)	441, 704, 867, 972, 1291
RseI	CAYNNNNRTG	1 cut(s)	197
SaqAI	TTAA	5 cut(s)	533, 665, 680, 965, 1607
SatI	GCNGC	8 cut(s)	76, 79, 354, 1077, 1080, 1275, 1353, 1505
Sau3AI	GATC	5 cut(s)	991, 1065, 1488, 1561, 1570
Sau96I	GGNCC	4 cut(s)	168, 323, 359, 494
SchI	GAGTC	5 cut(s)	130, 549, 802, 1118, 1242
ScrFI	CCNGG	1 cut(s)	491
SduI	GDGCHC	2 cut(s)	25, 210
SfaNI	GCATC	3 cut(s)	1354, 1364, 1491
SfcI	CTRYAG	4 cut(s)	429, 670, 1275, 1482
SinI	GGWCC	4 cut(s)	168, 323, 359, 494
SmiMI	CAYNNNNRTG	1 cut(s)	197
SmlI	CTYRAG	1 cut(s)	1454
SmoI	CTYRAG	1 cut(s)	1454
Sse9I	AATT	8 cut(s)	118, 161, 756, 814, 841, 966, 1035, 1425
SseBI	AGGCCT	1 cut(s)	419
SsiI	CCGC	6 cut(s)	75, 78, 486, 1079, 1183, 1412
SspMI	CTAG	4 cut(s)	15, 180, 252, 368
StuI	AGGCCT	1 cut(s)	419
StyD4I	CCNGG	1 cut(s)	489
StyI	CCWWGG	3 cut(s)	251, 909, 1069
TaaI	ACNGT	4 cut(s)	126, 344, 1295, 1387
TaiI	ACGT	1 cut(s)	28
TasI	AATT	8 cut(s)	118, 161, 756, 814, 841, 966, 1035, 1425
TatI	WGTACW	3 cut(s)	703, 866, 1290
TauI	GCSGC	3 cut(s)	78, 81, 1082
TfiI	GAWTC	3 cut(s)	624, 857, 1372
Tru1I	TTAA	5 cut(s)	533, 665, 680, 965, 1607
Tru9I	TTAA	5 cut(s)	533, 665, 680, 965, 1607
TscAI	CASTG	4 cut(s)	129, 349, 639, 1126
TseFI	GTSAC	2 cut(s)	86, 1121
TseI	GCWGC	5 cut(s)	353, 1076, 1274, 1352, 1504
Tsp45I	GTSAC	2 cut(s)	86, 1121
TspDTI	ATGAA	7 cut(s)	30, 75, 388, 539, 1306, 1556, 1565
TspGWI	ACGGA	1 cut(s)	96
TspRI	CASTG	4 cut(s)	129, 349, 639, 1126
Van91I	CCANNNNNTGG	1 cut(s)	1208
VpaK11BI	GGWCC	4 cut(s)	168, 323, 359, 494
XapI	RAATTY	3 cut(s)	161, 814, 841
XmaJI	CCTAGG	1 cut(s)	251
XmiI	GTMKAC	2 cut(s)	28, 796
XspI	CTAG	4 cut(s)	15, 180, 252, 368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.