Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig01086

Orthogroup ID

OG0001720

Physical Location & Seq

Genomic Coordinates Reverse (-)

11443 .. 14803

Gene Structure 3361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G023490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGAATTGGGGTGGCTGCAATGGCTTTGGTTGGACACCATTGACTGGTTGGTCTCTTCGGCGGCGACTCATGGTAGCAGCGGCGGCTTGTTTTGTTGTGGTGGTTACTATGGGAAATTGAGGACCACGGCAACTAGGGAAGGCTCCATTGAAATGGGAGAGCACCACAATCCCGATTATGTTGTGGTTAGTGAAGCACAATCCCCTAGGGTAAATAACTTCAAGAAAGTCTCAGTTCTGCCCCTTGTCTTCCTCATCTTCTATGAGGTATCTGGGGGTCCATTTGGTATTGAGGACAGTGTTCAGGCTGCCGGCCCCCTTCTAGCGCTTCTGGGGTTCTTGGTCTTTCCATTCATTTGGAGTGTTCCTGAGGCCTTGATTACTGCAGAGATGGGTACCATGTTCCCTGTGAATGGGGGTTATGTGGTTTGGGTTTCTTCGGCCCTGGGTCCATTTTGGGGGTTTCAACAAGGATGGGTGAAATGGTTAAGTGGAGTCATTGATAATGCTTTGTACCCAGTTCTGTTTTTGGATTACTTGAAGTCAGCAATACCAGCTTTAGGCGGTGGATTTCCAAGAATCGTGGCAGTGTTAGCTTTGACATTGTTCCTCACTTACTTAAACTATAGGGGTTTAACCATTGTGGGATGGGTTGCTGTACTTTTAGGGATTTTCTCAATCATTCCTTTTGTGGTTATGGGACTTGTGGCAATTCCCAAGTTGGAGCCTTCAAGATGGTTAGTGGTGAGTCTACATAATGTGGACTGGAATTTGTATTTGAACACTCTCTTTTGGAATTTGAACTATTGGGATTCTATAAGTACACTTGCCGGAGAGGTGGAGAACCCAAAGAAAACTCTCCCCAAGGCTCTTTTTTATGCGTTGATTTTGGTTGTTATTGGATATTTCTTCCCCCTTTTAATTGGTACTGGGGCTGTTCCGCTTGATCGTGAGTTGTGGACTGATGGTTACTTCTCTGATATTGCAAAAATTGTTGGGGGAGTTTGGTTGAGATGTTGGATTCAAGGGGCTGCGGCAATGTCAAATATGGGGATGTTTGTGGCTGAAATGAGCAGTGACTCTTTTCAACTTCTTGGGATGGCAGAAAGAGGGATGTTGCCTGAGTTCTTTGGTAAGCGGTCTCGTTATGGAACCCCAGTCATTGGCATTATGTTCTCAGCTTCCGGAGTCCTTTTGCTATCTTGGCTAAGCTTTCAAGAGATTGTAGCTGCAGAAAACTTCTTGTACTGTGTTGGAATGATTTTGGAGTTCATAGCATTTATAATATTACGGGTGAAGCATCCAGCTGCATCTCGGCCATACAAGATTCCTGTTGGAACAATTGGAACCATACTTTTGTGCATTCCGCCAACCCTGCTAATTGGTGTAGTGTTGGCTCTTTCTGAACTCAAGGTTGTGGTTGTGAGCCTTATAGCTATAGTGATCGGCCTTGTGATGCAGCCCTGTCTCACTTATGTTGAGAGGAAGATGTGGATGAAGTTCTCCATCAGTTCTGATCTCCCAGATCTTCATGGTGCTAATCAGGAGAGTGCCAACTCCTTAATAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006082 GO:0006520 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0006928 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015171 GO:0015179 GO:0015203 GO:0015291 GO:0015297 GO:0015318 GO:0015711 GO:0015807 GO:0015846 GO:0015849 GO:0016020 GO:0016021 GO:0016043 GO:0016477 GO:0019752 GO:0022607 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0040011 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0048870 GO:0050900 GO:0051179 GO:0051234 GO:0051674 GO:0055085 GO:0065003 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0098656 GO:1901564 GO:1902047 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2

Protein Analysis

523

Amino Acids

57.59

Weight (kDa)

5.49

Isoelectric Point (pI)

35.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	80 - 461	4.3e-40	Amino acid permease
AA_permease	PF00324	97 - 466	2.3e-20	Amino acid permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31820 AT1G31830 AT1G31830 AT5G05630
fragaria_vesca	FvH4_2g15680 FvH4_2g15680 FvH4_4g35270 FvH4_5g24050 FvH4_5g24050
malus_domestica	MD06G1016700.v1.1 MD17G1241900.v1.1
prunus_persica	Prupe.5G019700_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1 Prupe.8G169300_v2.0.a1
pyrus_communis	pycom05g11950 pycom06g01360 pycom10g10980
rosa_chinensis	RchiOBHm_Chr6g0278981 RchiOBHm_Chr7g0213541 RchiOBHm_Chr7g0243451
rosa_laevigata	RLG00000002797 RLG00000013178
rosa_multiflora	Rmu_co8436609.1_g000001 Rmu_sc0002080.1_g000041 Rmu_sc0008539.1_g000001 Rmu_sc0009618.1_g000016 Rmu_sc0010076.1_g000001
rosa_roxburghii	Rroxscaffold_3G00245800 Rroxscaffold_7G00189290
rosa_rugosa	Rorug06G0120600 Rorug07G0142700 Rorug07G0142800 Rorug07G0319500
rosa_samantha	Rh6AG229300 Rh6BG234500 Rh6CG236700 Rh6DG228300 Rh7AG276000 Rh7BG270400 Rh7BG445400 Rh7CG294900 Rh7DG282600
rosa_wichuraiana	Rw0G023490 Rw6G020080 Rw7G023850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1283
AasI	GACNNNNNNGTC	1 cut(s)	50
Acc65I	GGTACC	1 cut(s)	395
AccB1I	GGYRCC	1 cut(s)	395
AccB7I	CCANNNNNTGG	2 cut(s)	45, 1163
AccI	GTMKAC	1 cut(s)	751
AccIII	TCCGGA	1 cut(s)	1184
AciI	CCGC	8 cut(s)	62, 81, 84, 564, 941, 1034, 1138, 1367
AcoI	YGGCCR	1 cut(s)	1316
AcsI	RAATTY	2 cut(s)	769, 796
AfaI	GTAC	6 cut(s)	397, 515, 660, 823, 928, 1247
AfeI	AGCGCT	1 cut(s)	327
AfiI	CCNNNNNNNGG	5 cut(s)	45, 413, 458, 560, 1163
AjnI	CCWGG	1 cut(s)	444
AluBI	AGCT	7 cut(s)	557, 596, 1181, 1212, 1229, 1307, 1436
AluI	AGCT	7 cut(s)	557, 596, 1181, 1212, 1229, 1307, 1436
Alw21I	GWGCWC	1 cut(s)	165
Alw26I	GTCTC	4 cut(s)	58, 235, 1146, 1472
Aor13HI	TCCGGA	1 cut(s)	1184
Aor51HI	AGCGCT	1 cut(s)	327
AoxI	GGCC	5 cut(s)	313, 372, 441, 1316, 1447
ApeKI	GCWGC	7 cut(s)	16, 78, 308, 1031, 1229, 1307, 1459
ApoI	RAATTY	2 cut(s)	769, 796
Asp718I	GGTACC	1 cut(s)	395
AspA2I	CCTAGG	1 cut(s)	206
AspLEI	GCGC	1 cut(s)	328
AspS9I	GGNCC	5 cut(s)	123, 278, 314, 442, 449
AsuHPI	GGTGA	3 cut(s)	490, 757, 1306
AvaII	GGWCC	3 cut(s)	123, 278, 449
AvrII	CCTAGG	1 cut(s)	206
AxyI	CCTNAGG	1 cut(s)	369
BanI	GGYRCC	1 cut(s)	395
BbsI	GAAGAC	1 cut(s)	241
Bbv12I	GWGCWC	1 cut(s)	165
BbvI	GCAGC	7 cut(s)	3, 90, 295, 1018, 1216, 1294, 1471
BccI	CCATC	7 cut(s)	385, 468, 642, 729, 959, 1093, 1514
BceAI	ACGGC	1 cut(s)	144
BciT130I	CCWGG	1 cut(s)	446
BcoDI	GTCTC	4 cut(s)	58, 235, 1146, 1472
BfaI	CTAG	3 cut(s)	135, 207, 323
BfmI	CTRYAG	4 cut(s)	384, 625, 1230, 1437
BfoI	RGCGCY	1 cut(s)	329
BglII	AGATCT	1 cut(s)	1525
BlnI	CCTAGG	1 cut(s)	206
BlpI	GCTNAGC	1 cut(s)	1208
Bme1390I	CCNGG	1 cut(s)	446
Bme18I	GGWCC	3 cut(s)	123, 278, 449
BmgT120I	GGNCC	5 cut(s)	123, 278, 314, 442, 449
BmiI	GGNNCC	8 cut(s)	145, 279, 316, 397, 450, 726, 1153, 1348
BmrFI	CCNGG	1 cut(s)	446
BmrI	ACTGGG	3 cut(s)	512, 939, 1151
BmsI	GCATC	3 cut(s)	1309, 1319, 1446
BmuI	ACTGGG	3 cut(s)	512, 939, 1151
BpiI	GAAGAC	1 cut(s)	241
Bpu1102I	GCTNAGC	1 cut(s)	1208
BpuEI	CTTGAG	1 cut(s)	1394
BsaI	GGTCTC	2 cut(s)	58, 1146
BsaJI	CCNNGG	5 cut(s)	126, 206, 444, 445, 864
BsaWI	WCCGGW	1 cut(s)	1184
Bsc4I	CCNNNNNNNGG	5 cut(s)	45, 413, 458, 560, 1163
Bse118I	RCCGGY	1 cut(s)	311
Bse1I	ACTGG	5 cut(s)	50, 518, 770, 934, 1157
Bse21I	CCTNAGG	1 cut(s)	369
Bse3DI	GCAATG	2 cut(s)	26, 1044
BseAI	TCCGGA	1 cut(s)	1184
BseBI	CCWGG	1 cut(s)	446
BseDI	CCNNGG	5 cut(s)	126, 206, 444, 445, 864
BseGI	GGATG	7 cut(s)	479, 653, 1059, 1104, 1119, 1300, 1500
BseLI	CCNNNNNNNGG	5 cut(s)	45, 413, 458, 560, 1163
BseMI	GCAATG	2 cut(s)	26, 1044
BseMII	CTCAG	4 cut(s)	246, 360, 1113, 1191
BseNI	ACTGG	5 cut(s)	50, 518, 770, 934, 1157
BseXI	GCAGC	7 cut(s)	3, 90, 295, 1018, 1216, 1294, 1471
BshFI	GGCC	5 cut(s)	315, 374, 443, 1318, 1449
BshNI	GGYRCC	1 cut(s)	395
BsiHKAI	GWGCWC	1 cut(s)	165
BsiSI	CCGG	3 cut(s)	312, 831, 1185
BslFI	GGGAC	1 cut(s)	714
BslI	CCNNNNNNNGG	5 cut(s)	45, 413, 458, 560, 1163
BsmAI	GTCTC	4 cut(s)	58, 235, 1146, 1472
BsmFI	GGGAC	1 cut(s)	714
BsmI	GAATGC	1 cut(s)	1362
BsnI	GGCC	5 cut(s)	315, 374, 443, 1318, 1449
Bso31I	GGTCTC	2 cut(s)	58, 1146
Bsp1286I	GDGCHC	1 cut(s)	165
Bsp13I	TCCGGA	1 cut(s)	1184
Bsp143I	GATC	4 cut(s)	946, 1443, 1516, 1525
Bsp1720I	GCTNAGC	1 cut(s)	1208
BspACI	CCGC	8 cut(s)	62, 81, 84, 564, 941, 1034, 1138, 1367
BspANI	GGCC	5 cut(s)	315, 374, 443, 1318, 1449
BspCNI	CTCAG	4 cut(s)	245, 361, 1114, 1190
BspEI	TCCGGA	1 cut(s)	1184
BspLI	GGNNCC	8 cut(s)	145, 279, 316, 397, 450, 726, 1153, 1348
BspMAI	CTGCAG	2 cut(s)	388, 1234
BspT107I	GGYRCC	1 cut(s)	395
BspTNI	GGTCTC	2 cut(s)	58, 1146
BsrDI	GCAATG	2 cut(s)	26, 1044
BsrFI	RCCGGY	1 cut(s)	311
BsrI	ACTGG	5 cut(s)	50, 518, 770, 934, 1157
BssAI	RCCGGY	1 cut(s)	311
BssECI	CCNNGG	5 cut(s)	126, 206, 444, 445, 864
BssMI	GATC	4 cut(s)	946, 1443, 1516, 1525
BssT1I	CCWWGG	2 cut(s)	206, 864
Bst2UI	CCWGG	1 cut(s)	446
Bst4CI	ACNGT	2 cut(s)	299, 1250
Bst6I	CTCTTC	1 cut(s)	61
BstC8I	GCNNGC	1 cut(s)	313
BstDEI	CTNAG	5 cut(s)	232, 369, 1122, 1177, 1208
BstDSI	CCRYGG	1 cut(s)	126
BstF5I	GGATG	7 cut(s)	479, 653, 1059, 1104, 1119, 1300, 1500
BstH2I	RGCGCY	1 cut(s)	329
BstHHI	GCGC	1 cut(s)	328
BstKTI	GATC	4 cut(s)	949, 1446, 1519, 1528
BstMAI	GTCTC	4 cut(s)	58, 235, 1146, 1472
BstMBI	GATC	4 cut(s)	946, 1443, 1516, 1525
BstMWI	GCNNNNNNNGC	6 cut(s)	22, 84, 554, 593, 1204, 1375
BstNI	CCWGG	1 cut(s)	446
BstSCI	CCNGG	1 cut(s)	444
BstSFI	CTRYAG	4 cut(s)	384, 625, 1230, 1437
BstV1I	GCAGC	7 cut(s)	3, 90, 295, 1018, 1216, 1294, 1471
BstV2I	GAAGAC	1 cut(s)	241
BstX2I	RGATCY	1 cut(s)	1525
BstXI	CCANNNNNNTGG	2 cut(s)	154, 357
BstYI	RGATCY	1 cut(s)	1525
Bsu36I	CCTNAGG	1 cut(s)	369
BsuRI	GGCC	5 cut(s)	315, 374, 443, 1318, 1449
BtgI	CCRYGG	1 cut(s)	126
BtsCI	GGATG	7 cut(s)	479, 653, 1059, 1104, 1119, 1300, 1500
BtsI	GCAGTG	2 cut(s)	594, 1081
BtsIMutI	CAGTG	3 cut(s)	304, 594, 1081
Cac8I	GCNNGC	1 cut(s)	313
CfoI	GCGC	1 cut(s)	328
Cfr10I	RCCGGY	1 cut(s)	311
Cfr13I	GGNCC	5 cut(s)	123, 278, 314, 442, 449
Csp6I	GTAC	6 cut(s)	396, 514, 659, 822, 927, 1246
CspCI	CAANNNNNGTGG	2 cut(s)	564, 599
CviAII	CATG	3 cut(s)	71, 400, 1532
CviQI	GTAC	6 cut(s)	396, 514, 659, 822, 927, 1246
DdeI	CTNAG	5 cut(s)	232, 369, 1122, 1177, 1208
DpnI	GATC	4 cut(s)	948, 1445, 1518, 1527
DpnII	GATC	4 cut(s)	946, 1443, 1516, 1525
DrdI	GACNNNNNNGTC	1 cut(s)	50
DseDI	GACNNNNNNGTC	1 cut(s)	50
EaeI	YGGCCR	1 cut(s)	1316
Eam1104I	CTCTTC	1 cut(s)	61
EarI	CTCTTC	1 cut(s)	61
EciI	GGCGGA	1 cut(s)	1356
Eco130I	CCWWGG	2 cut(s)	206, 864
Eco147I	AGGCCT	1 cut(s)	374
Eco31I	GGTCTC	2 cut(s)	58, 1146
Eco47I	GGWCC	3 cut(s)	123, 278, 449
Eco47III	AGCGCT	1 cut(s)	327
Eco81I	CCTNAGG	1 cut(s)	369
EcoRII	CCWGG	1 cut(s)	444
EcoT14I	CCWWGG	2 cut(s)	206, 864
ErhI	CCWWGG	2 cut(s)	206, 864
FaeI	CATG	3 cut(s)	74, 403, 1535
FaqI	GGGAC	1 cut(s)	714
FatI	CATG	3 cut(s)	70, 399, 1531
FblI	GTMKAC	1 cut(s)	751
FokI	GGATG	7 cut(s)	486, 660, 1066, 1111, 1126, 1287, 1507
FspBI	CTAG	3 cut(s)	135, 207, 323
GlaI	GCGC	1 cut(s)	327
HaeII	RGCGCY	1 cut(s)	329
HaeIII	GGCC	5 cut(s)	315, 374, 443, 1318, 1449
HapII	CCGG	3 cut(s)	312, 831, 1185
HhaI	GCGC	1 cut(s)	328
Hin1II	CATG	3 cut(s)	74, 403, 1535
Hin6I	GCGC	1 cut(s)	326
HinP1I	GCGC	1 cut(s)	326
HindIII	AAGCTT	1 cut(s)	1210
HinfI	GANTC	9 cut(s)	67, 495, 579, 748, 812, 1021, 1079, 1188, 1327
HpaII	CCGG	3 cut(s)	312, 831, 1185
HphI	GGTGA	3 cut(s)	490, 757, 1306
Hpy166II	GTNNAC	4 cut(s)	752, 763, 824, 960
Hpy188I	TCNGA	3 cut(s)	979, 1405, 1516
Hpy188III	TCNNGA	8 cut(s)	173, 223, 368, 732, 950, 1185, 1217, 1544
Hpy8I	GTNNAC	4 cut(s)	752, 763, 824, 960
HpyAV	CCTTC	3 cut(s)	134, 329, 738
HpyCH4III	ACNGT	2 cut(s)	299, 1250
HpyCH4V	TGCA	7 cut(s)	19, 386, 986, 1232, 1310, 1362, 1459
HpyF10VI	GCNNNNNNNGC	6 cut(s)	22, 84, 554, 593, 1204, 1375
HpyF3I	CTNAG	5 cut(s)	232, 369, 1122, 1177, 1208
Hsp92II	CATG	3 cut(s)	74, 403, 1535
HspAI	GCGC	1 cut(s)	326
Kpn2I	TCCGGA	1 cut(s)	1184
KpnI	GGTACC	1 cut(s)	399
KroI	GCCGGC	1 cut(s)	311
KroNI	GCCGGC	1 cut(s)	313
Kzo9I	GATC	4 cut(s)	946, 1443, 1516, 1525
LmnI	GCTCC	2 cut(s)	149, 724
Lsp1109I	GCAGC	7 cut(s)	3, 90, 295, 1018, 1216, 1294, 1471
LweI	GCATC	3 cut(s)	1309, 1319, 1446
MaeI	CTAG	3 cut(s)	135, 207, 323
MaeIII	GTNAC	3 cut(s)	104, 968, 1076
MalI	GATC	4 cut(s)	948, 1445, 1518, 1527
MboI	GATC	4 cut(s)	946, 1443, 1516, 1525
MboII	GAAGA	7 cut(s)	48, 241, 250, 429, 901, 1498, 1520
MfeI	CAATTG	1 cut(s)	1341
MflI	RGATCY	1 cut(s)	1525
MhlI	GDGCHC	1 cut(s)	165
MluCI	AATT	9 cut(s)	5, 116, 711, 769, 796, 921, 990, 1341, 1380
MlyI	GAGTC	5 cut(s)	61, 504, 757, 1073, 1197
MmeI	TCCRAC	5 cut(s)	12, 702, 998, 1234, 1315
MnlI	CCTC	9 cut(s)	114, 259, 263, 286, 364, 620, 829, 1103, 1476
MroI	TCCGGA	1 cut(s)	1184
MroNI	GCCGGC	1 cut(s)	311
MseI	TTAA	5 cut(s)	488, 620, 635, 920, 1562
MslI	CAYNNNNRTG	1 cut(s)	152
MspA1I	CMGCKG	2 cut(s)	81, 1307
MspI	CCGG	3 cut(s)	312, 831, 1185
MspR9I	CCNGG	1 cut(s)	446
MunI	CAATTG	1 cut(s)	1341
Mva1269I	GAATGC	1 cut(s)	1362
MvaI	CCWGG	1 cut(s)	446
MwoI	GCNNNNNNNGC	6 cut(s)	22, 84, 554, 593, 1204, 1375
NaeI	GCCGGC	1 cut(s)	313
NdeII	GATC	4 cut(s)	946, 1443, 1516, 1525
NgoMIV	GCCGGC	1 cut(s)	311
NlaIII	CATG	3 cut(s)	74, 403, 1535
NlaIV	GGNNCC	8 cut(s)	145, 279, 316, 397, 450, 726, 1153, 1348
NmeAIII	GCCGAG	1 cut(s)	1294
NmuCI	GTSAC	1 cut(s)	1076
PasI	CCCWGGG	1 cut(s)	445
PceI	AGGCCT	1 cut(s)	374
PctI	GAATGC	1 cut(s)	1362
PdiI	GCCGGC	1 cut(s)	313
PfeI	GAWTC	4 cut(s)	579, 812, 1021, 1327
PflMI	CCANNNNNTGG	2 cut(s)	45, 1163
PleI	GAGTC	5 cut(s)	61, 503, 756, 1073, 1196
PpsI	GAGTC	5 cut(s)	61, 503, 756, 1073, 1196
PsiI	TTATAA	1 cut(s)	1283
Psp6I	CCWGG	1 cut(s)	444
PspGI	CCWGG	1 cut(s)	444
PspN4I	GGNNCC	8 cut(s)	145, 279, 316, 397, 450, 726, 1153, 1348
PspPI	GGNCC	5 cut(s)	123, 278, 314, 442, 449
PstI	CTGCAG	2 cut(s)	388, 1234
PsuI	RGATCY	1 cut(s)	1525
PvuII	CAGCTG	1 cut(s)	1307
RsaI	GTAC	6 cut(s)	397, 515, 660, 823, 928, 1247
RsaNI	GTAC	6 cut(s)	396, 514, 659, 822, 927, 1246
RseI	CAYNNNNRTG	1 cut(s)	152
SaqAI	TTAA	5 cut(s)	488, 620, 635, 920, 1562
Sau3AI	GATC	4 cut(s)	946, 1443, 1516, 1525
Sau96I	GGNCC	5 cut(s)	123, 278, 314, 442, 449
SchI	GAGTC	5 cut(s)	61, 504, 757, 1073, 1197
ScrFI	CCNGG	1 cut(s)	446
SduI	GDGCHC	1 cut(s)	165
SfaNI	GCATC	3 cut(s)	1309, 1319, 1446
SfcI	CTRYAG	4 cut(s)	384, 625, 1230, 1437
SinI	GGWCC	3 cut(s)	123, 278, 449
SmiMI	CAYNNNNRTG	1 cut(s)	152
SmlI	CTYRAG	1 cut(s)	1409
SmoI	CTYRAG	1 cut(s)	1409
Sse9I	AATT	9 cut(s)	5, 116, 711, 769, 796, 921, 990, 1341, 1380
SseBI	AGGCCT	1 cut(s)	374
SsiI	CCGC	8 cut(s)	62, 81, 84, 564, 941, 1034, 1138, 1367
SspI	AATATT	1 cut(s)	1287
SspMI	CTAG	3 cut(s)	135, 207, 323
StuI	AGGCCT	1 cut(s)	374
StyD4I	CCNGG	1 cut(s)	444
StyI	CCWWGG	2 cut(s)	206, 864
TaaI	ACNGT	2 cut(s)	299, 1250
TasI	AATT	9 cut(s)	5, 116, 711, 769, 796, 921, 990, 1341, 1380
TatI	WGTACW	3 cut(s)	658, 821, 1245
TauI	GCSGC	4 cut(s)	65, 84, 87, 1037
TfiI	GAWTC	4 cut(s)	579, 812, 1021, 1327
Tru1I	TTAA	5 cut(s)	488, 620, 635, 920, 1562
Tru9I	TTAA	5 cut(s)	488, 620, 635, 920, 1562
TscAI	CASTG	3 cut(s)	304, 594, 1081
TseFI	GTSAC	1 cut(s)	1076
TseI	GCWGC	7 cut(s)	16, 78, 308, 1031, 1229, 1307, 1459
Tsp45I	GTSAC	1 cut(s)	1076
TspDTI	ATGAA	4 cut(s)	343, 1261, 1511, 1520
TspRI	CASTG	3 cut(s)	304, 594, 1081
Van91I	CCANNNNNTGG	2 cut(s)	45, 1163
VpaK11BI	GGWCC	3 cut(s)	123, 278, 449
XapI	RAATTY	2 cut(s)	769, 796
XcmI	CCANNNNNNNNNTGG	1 cut(s)	46
XmaJI	CCTAGG	1 cut(s)	206
XmiI	GTMKAC	1 cut(s)	751
XspI	CTAG	3 cut(s)	135, 207, 323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.