Prupe.5G053000_v2.0.a1

Plays a complex role in regulating the basal catalytic activity of the alpha subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0001417
Physical Location & Seq
Reverse (-)
5694858 .. 5699071
4214 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G053000.3

Sequence Viewer

Length: 861 bp
ATGTATAGGGAGCGAGGGGTGGGTGGGTCGAAGGTGACGGAGGTGGGGCCTGCCGTTGATCGGAAGCGGATCAATGACGCTCTGGACAAGCAGCTCGAGCGATCCTCGCCGTCCACTTCTAGGGCAATCAATGGCAAGGATAAGCCGCTTATCATGGGGGGAAAGCAGCCTCCATCTGACCACAGAGACTCTCGCTCTGCCTCTGCCTCTCTCGCCAAAACCAATTGCTCCGATGAGGAATCTGAAACAGACAGTGAAGAGTCAGATGTTAGTGGTTCAGATGGGGATGACACATCTTGGATCTCATGGTTTTGCAATTTACGAGGAAATGAATTTTTTTGCGAAGTTGATGATGATTACATACAAGATGATTTTAACCTCTGCGGGCTAAGCAGTCAAGTGCCATACTATGATTATGCACTTGATTTAATTTTGGATGTTGAATCTTCTCACGGTGATATGTTCACAGAAGAACAGAATGAGTTGATTGAATCAGCAGCAGAGATGCTTTATGGTCTAATTCATGTTCGATATATATTGACAAGCAAAGGCATGGCGGCCATGCTAGACAAGTACAAAAACTATGATTTTGGGAGATGCCCAAGAGTTTTCTGCTGCGGACAACCCTGCCTCCCAGTTGGCCAATCGGATATCCCACGGTCAAGCACTGTAAAAATATATTGCCCCAAGTGTGAAGATATCTACTACCCTCGATCGAAGTATCAAGGTAACATTGATGGAGCCTACTTCGGAAGTACATTTCCTCACCTGTTCTTGATGACATACGGGAACCTGAAGCCTCAGAAGGCATCACAGAGCTATGTTCCTAGAGTGTTCGGATTCAAGCTTCACAAGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 ko04064 ko04137 ko04139 ko04310 ko04520 ko04712 ko05162 ko05168 ko05169 map03008 map04064 map04137 map04139 map04310 map04520 map04712 map05162 map05168 map05169
Pfam Domains
Protein Families
CK_II_beta

Protein Analysis

287

Amino Acids

32.1

Weight (kDa)

4.99

Isoelectric Point (pI)

49.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 67, 146, 384, 557, 618
AclWI GGATC 3 cut(s) 77, 96, 308
AcoI YGGCCR 2 cut(s) 558, 640
AcsI RAATTY 1 cut(s) 332
AcuI CTGAAG 1 cut(s) 815
AfaI GTAC 2 cut(s) 575, 757
AfiI CCNNNNNNNGG 2 cut(s) 60, 120
AgsI TTSAA 3 cut(s) 443, 491, 844
AluBI AGCT 3 cut(s) 94, 819, 847
AluI AGCT 3 cut(s) 94, 819, 847
Alw26I GTCTC 1 cut(s) 180
AlwI GGATC 3 cut(s) 77, 96, 308
Ama87I CYCGRG 1 cut(s) 95
AoxI GGCC 3 cut(s) 47, 558, 640
ApeKI GCWGC 4 cut(s) 91, 166, 497, 615
ApoI RAATTY 1 cut(s) 332
AspS9I GGNCC 1 cut(s) 47
AsuHPI GGTGA 3 cut(s) 46, 467, 758
AvaI CYCGRG 1 cut(s) 95
BalI TGGCCA 1 cut(s) 642
BbvI GCAGC 4 cut(s) 103, 178, 509, 602
BccI CCATC 3 cut(s) 181, 275, 731
BceAI ACGGC 2 cut(s) 38, 94
BcoDI GTCTC 1 cut(s) 180
BfaI CTAG 3 cut(s) 120, 566, 828
BisI GCNGC 6 cut(s) 92, 146, 167, 498, 558, 616
BlpI GCTNAGC 1 cut(s) 389
BlsI GCNGC 6 cut(s) 93, 147, 168, 499, 559, 617
BmeT110I CYCGRG 1 cut(s) 95
BmgT120I GGNCC 1 cut(s) 47
BmiI GGNNCC 3 cut(s) 48, 742, 791
BmrI ACTGGG 1 cut(s) 629
BmsI GCATC 3 cut(s) 495, 587, 818
BmuI ACTGGG 1 cut(s) 629
BplI GAGNNNNNCTC 2 cut(s) 89, 121
Bpu1102I GCTNAGC 1 cut(s) 389
BsaJI CCNNGG 1 cut(s) 656
BsaXI ACNNNNNCTCC 2 cut(s) 615, 645
Bsc4I CCNNNNNNNGG 2 cut(s) 60, 120
Bse1I ACTGG 1 cut(s) 635
BseDI CCNNGG 1 cut(s) 656
BseGI GGATG 2 cut(s) 292, 442
BseLI CCNNNNNNNGG 2 cut(s) 60, 120
BseMII CTCAG 1 cut(s) 815
BseNI ACTGG 1 cut(s) 635
BseXI GCAGC 4 cut(s) 103, 178, 509, 602
Bsh1285I CGRYCG 1 cut(s) 716
BshFI GGCC 3 cut(s) 49, 560, 642
BsiEI CGRYCG 1 cut(s) 716
BsiHKCI CYCGRG 1 cut(s) 95
BslI CCNNNNNNNGG 2 cut(s) 60, 120
BsmAI GTCTC 1 cut(s) 180
BsnI GGCC 3 cut(s) 49, 560, 642
BsoBI CYCGRG 1 cut(s) 95
Bsp143I GATC 5 cut(s) 58, 69, 101, 300, 713
Bsp1720I GCTNAGC 1 cut(s) 389
BspACI CCGC 5 cut(s) 67, 146, 384, 557, 618
BspANI GGCC 3 cut(s) 49, 560, 642
BspCNI CTCAG 1 cut(s) 814
BspLI GGNNCC 3 cut(s) 48, 742, 791
BspPI GGATC 3 cut(s) 77, 96, 308
BsrI ACTGG 1 cut(s) 635
BssECI CCNNGG 1 cut(s) 656
BssMI GATC 5 cut(s) 58, 69, 101, 300, 713
Bst4CI ACNGT 4 cut(s) 254, 455, 660, 670
Bst6I CTCTTC 1 cut(s) 252
BstC8I GCNNGC 2 cut(s) 51, 386
BstDEI CTNAG 2 cut(s) 389, 801
BstDSI CCRYGG 1 cut(s) 656
BstF5I GGATG 2 cut(s) 292, 442
BstKTI GATC 5 cut(s) 61, 72, 104, 303, 716
BstMAI GTCTC 1 cut(s) 180
BstMBI GATC 5 cut(s) 58, 69, 101, 300, 713
BstMCI CGRYCG 1 cut(s) 716
BstMWI GCNNNNNNNGC 5 cut(s) 97, 106, 212, 390, 853
BstV1I GCAGC 4 cut(s) 103, 178, 509, 602
BstX2I RGATCY 1 cut(s) 300
BstYI RGATCY 1 cut(s) 300
BsuRI GGCC 3 cut(s) 49, 560, 642
BtgI CCRYGG 1 cut(s) 656
BtsCI GGATG 2 cut(s) 292, 442
BtsIMutI CAGTG 2 cut(s) 259, 666
Cac8I GCNNGC 2 cut(s) 51, 386
Cfr13I GGNCC 1 cut(s) 47
CseI GACGC 1 cut(s) 86
Csp6I GTAC 2 cut(s) 574, 756
CviAII CATG 6 cut(s) 154, 306, 524, 553, 562, 858
CviQI GTAC 2 cut(s) 574, 756
DdeI CTNAG 2 cut(s) 389, 801
DpnI GATC 5 cut(s) 60, 71, 103, 302, 715
DpnII GATC 5 cut(s) 58, 69, 101, 300, 713
EaeI YGGCCR 2 cut(s) 558, 640
Eam1104I CTCTTC 1 cut(s) 252
EarI CTCTTC 1 cut(s) 252
Eco32I GATATC 2 cut(s) 652, 700
Eco57I CTGAAG 1 cut(s) 815
Eco88I CYCGRG 1 cut(s) 95
EcoO109I RGGNCCY 1 cut(s) 47
EcoRV GATATC 2 cut(s) 652, 700
FaeI CATG 6 cut(s) 157, 309, 527, 556, 565, 861
FatI CATG 6 cut(s) 153, 305, 523, 552, 561, 857
FauI CCCGC 1 cut(s) 377
Fnu4HI GCNGC 6 cut(s) 92, 146, 167, 498, 558, 616
FokI GGATG 2 cut(s) 299, 449
Fsp4HI GCNGC 6 cut(s) 92, 146, 167, 498, 558, 616
FspBI CTAG 3 cut(s) 120, 566, 828
GluI GCNGC 6 cut(s) 92, 146, 167, 498, 558, 616
HaeIII GGCC 3 cut(s) 49, 560, 642
HgaI GACGC 1 cut(s) 86
Hin1II CATG 6 cut(s) 157, 309, 527, 556, 565, 861
HindIII AAGCTT 1 cut(s) 845
HinfI GANTC 6 cut(s) 188, 239, 260, 443, 491, 840
HphI GGTGA 3 cut(s) 46, 467, 758
Hpy166II GTNNAC 2 cut(s) 114, 465
Hpy188III TCNNGA 2 cut(s) 83, 775
Hpy8I GTNNAC 2 cut(s) 114, 465
HpyAV CCTTC 2 cut(s) 25, 799
HpyCH4III ACNGT 4 cut(s) 254, 455, 660, 670
HpyCH4V TGCA 2 cut(s) 315, 419
HpyF10VI GCNNNNNNNGC 5 cut(s) 97, 106, 212, 390, 853
HpyF3I CTNAG 2 cut(s) 389, 801
Hsp92II CATG 6 cut(s) 157, 309, 527, 556, 565, 861
Kzo9I GATC 5 cut(s) 58, 69, 101, 300, 713
LmnI GCTCC 3 cut(s) 10, 233, 740
LpnPI CCDG 6 cut(s) 63, 68, 640, 648, 782, 806
Lsp1109I GCAGC 4 cut(s) 103, 178, 509, 602
LweI GCATC 3 cut(s) 495, 587, 818
MaeI CTAG 3 cut(s) 120, 566, 828
MaeIII GTNAC 2 cut(s) 34, 728
MalI GATC 5 cut(s) 60, 71, 103, 302, 715
MboI GATC 5 cut(s) 58, 69, 101, 300, 713
MboII GAAGA 4 cut(s) 269, 438, 482, 707
MfeI CAATTG 1 cut(s) 223
MflI RGATCY 1 cut(s) 300
MlsI TGGCCA 1 cut(s) 642
MluCI AATT 5 cut(s) 223, 316, 332, 429, 519
MluNI TGGCCA 1 cut(s) 642
MlyI GAGTC 2 cut(s) 182, 269
Mox20I TGGCCA 1 cut(s) 642
MscI TGGCCA 1 cut(s) 642
MseI TTAA 2 cut(s) 375, 428
Msp20I TGGCCA 1 cut(s) 642
MunI CAATTG 1 cut(s) 223
MwoI GCNNNNNNNGC 5 cut(s) 97, 106, 212, 390, 853
NdeII GATC 5 cut(s) 58, 69, 101, 300, 713
NlaIII CATG 6 cut(s) 157, 309, 527, 556, 565, 861
NlaIV GGNNCC 3 cut(s) 48, 742, 791
NmuCI GTSAC 1 cut(s) 34
PaeR7I CTCGAG 1 cut(s) 95
PfeI GAWTC 4 cut(s) 239, 443, 491, 840
PkrI GCNGC 6 cut(s) 93, 147, 168, 499, 559, 617
Ple19I CGATCG 1 cut(s) 716
PleI GAGTC 2 cut(s) 182, 268
PpsI GAGTC 2 cut(s) 182, 268
PspN4I GGNNCC 3 cut(s) 48, 742, 791
PspPI GGNCC 1 cut(s) 47
PspXI VCTCGAGB 1 cut(s) 95
PsuI RGATCY 1 cut(s) 300
PvuI CGATCG 1 cut(s) 716
RsaI GTAC 2 cut(s) 575, 757
RsaNI GTAC 2 cut(s) 574, 756
SaqAI TTAA 2 cut(s) 375, 428
SatI GCNGC 6 cut(s) 92, 146, 167, 498, 558, 616
Sau3AI GATC 5 cut(s) 58, 69, 101, 300, 713
Sau96I GGNCC 1 cut(s) 47
SchI GAGTC 2 cut(s) 182, 269
SetI ASST 9 cut(s) 36, 45, 96, 381, 730, 771, 795, 821, 849
SfaNI GCATC 3 cut(s) 495, 587, 818
Sfr274I CTCGAG 1 cut(s) 95
SlaI CTCGAG 1 cut(s) 95
SmlI CTYRAG 1 cut(s) 95
SmoI CTYRAG 1 cut(s) 95
Sse9I AATT 5 cut(s) 223, 316, 332, 429, 519
SsiI CCGC 5 cut(s) 67, 146, 384, 557, 618
SspMI CTAG 3 cut(s) 120, 566, 828
TaaI ACNGT 4 cut(s) 254, 455, 660, 670
TaqI TCGA 5 cut(s) 29, 96, 529, 712, 716
TasI AATT 5 cut(s) 223, 316, 332, 429, 519
TatI WGTACW 2 cut(s) 573, 755
TauI GCSGC 2 cut(s) 148, 560
TfiI GAWTC 4 cut(s) 239, 443, 491, 840
Tru1I TTAA 2 cut(s) 375, 428
Tru9I TTAA 2 cut(s) 375, 428
TscAI CASTG 2 cut(s) 259, 673
TseFI GTSAC 1 cut(s) 34
TseI GCWGC 4 cut(s) 91, 166, 497, 615
Tsp45I GTSAC 1 cut(s) 34
TspDTI ATGAA 2 cut(s) 345, 512
TspGWI ACGGA 1 cut(s) 53
TspRI CASTG 2 cut(s) 259, 673
XapI RAATTY 1 cut(s) 332
XhoI CTCGAG 1 cut(s) 95
XspI CTAG 3 cut(s) 120, 566, 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.