Prupe.6G128500_v2.0.a1
ERF Family

BEST Arabidopsis thaliana protein match is alpha beta-Hydrolases superfamily protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0001884
Physical Location & Seq
Forward (+)
9975030 .. 9978419
3390 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G128500.3

Sequence Viewer

Length: 1026 bp
ATGATTGTACCAGTAGCAATAGCTTTGACAGTGGGTCTTCTAGGGTGGGCTTATCAAGCACTAAAGCCTCCCCCTCCGAAAATATGCGGATCGCCTGGTGGTCCTCCTGTTACTTCACCAAGAGTGAAACTCAGTGACGGTAGGCATTTGGCCTACAGGGAGTGTGGAGTTCCAAAAGAAGAGGCAAAACACAAGATCATTGTCGTTCATGGTTTTGATAGTTCCAAAGATTTGAGTTTACCTTTTGCTCAAGAACTTATAGAGGAGTTGAGCATATATTTCCTGTTCTTCGACAGAGCAGGCTATGGAGAGAGTGATCCATATCCATCGCGTTCTGTCAAGAGCGAAGCATTCGATATTCAAGAGCTCGCGGACAAGTTGCAGATTGGGTCTAAGTTTTATGTAATCGGAATCTCAATGGGAGCTTACCCTGTTTGGGGTTGCATGAAATACATACCACACAGATTGTCTGGAGCTTCCCTGGTAGTTCCTTTTGTGCACTACTGGTGGCCTTGTGTTCCTGCTAATCTATCAAGAGAGAGCCTCAGCACTCTCCCCGTATCAGATCAATGGGCGTTCCGAGTTGCATATTACGCCCCTTGGTTATTCCATTGGTGGATGACTCAGAAATTTTTCCCTTCACTAAGTGTCTTGTGCGGAAATACCTCAGTTTTCAGCCGTACAGATTTAGATATGCTGAAGAAACTCTCAGAAGCACCAAGTGTTGGTCAGGAAAAGATAACACAGCAAGGACACCACGAATCTCTGTACCGAGACATACTGGCTGGCTATGCAAAATGGGAATTCGACCCGTCGGAGCTGAAAAATCCATTCCCTGACAATGAGGGCTCATTTCACATTTGGCGAGGCTGTGAAGACAAGATCATTCCTTATAAACTAAACCGCTATATTGCAGAGAAGCTTCCCTGGATTCATTATCATGAAGTTCCTGGTTATGGCCATTTGCTTTTTCTTGAGAGTCATCTATGTGACGCTATTTTAAAAGCACTTTTGCTTAGAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6 Hydrolase_4

Protein Analysis

342

Amino Acids

38.75

Weight (kDa)

6.67

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 894
AccB7I CCANNNNNTGG 1 cut(s) 725
AccII CGCG 2 cut(s) 331, 371
AciI CCGC 4 cut(s) 87, 371, 657, 904
AclWI GGATC 2 cut(s) 97, 311
AcoI YGGCCR 1 cut(s) 958
AcsI RAATTY 2 cut(s) 629, 803
AcuI CTGAAG 1 cut(s) 719
AdeI CACNNNGTG 2 cut(s) 647, 722
AfaI GTAC 3 cut(s) 9, 682, 770
AfiI CCNNNNNNNGG 4 cut(s) 436, 437, 725, 956
AgsI TTSAA 1 cut(s) 362
AhdI GACNNNNNGTC 1 cut(s) 33
AjnI CCWGG 4 cut(s) 94, 480, 926, 949
AluBI AGCT 6 cut(s) 23, 367, 425, 476, 820, 922
AluI AGCT 6 cut(s) 23, 367, 425, 476, 820, 922
Alw21I GWGCWC 2 cut(s) 369, 501
Alw26I GTCTC 1 cut(s) 768
Alw44I GTGCAC 1 cut(s) 497
AlwI GGATC 2 cut(s) 97, 311
AoxI GGCC 3 cut(s) 150, 509, 958
ApaLI GTGCAC 1 cut(s) 497
ApoI RAATTY 2 cut(s) 629, 803
Asp700I GAANNNNTTC 1 cut(s) 632
AspS9I GGNCC 1 cut(s) 101
AsuHPI GGTGA 1 cut(s) 108
AvaII GGWCC 1 cut(s) 101
BaeGI GKGCMC 1 cut(s) 501
BalI TGGCCA 1 cut(s) 960
BanII GRGCYC 2 cut(s) 369, 851
BbsI GAAGAC 2 cut(s) 29, 882
Bbv12I GWGCWC 2 cut(s) 369, 501
BbvCI CCTCAGC 1 cut(s) 545
BccI CCATC 1 cut(s) 334
BceAI ACGGC 1 cut(s) 663
BciT130I CCWGG 4 cut(s) 96, 482, 928, 951
BcoDI GTCTC 1 cut(s) 768
BfaI CTAG 1 cut(s) 41
BfmI CTRYAG 1 cut(s) 154
Bme1390I CCNGG 4 cut(s) 96, 482, 928, 951
Bme18I GGWCC 1 cut(s) 101
BmeRI GACNNNNNGTC 1 cut(s) 33
BmgT120I GGNCC 1 cut(s) 101
BmrFI CCNGG 4 cut(s) 96, 482, 928, 951
BpiI GAAGAC 2 cut(s) 29, 882
BplI GAGNNNNNCTC 4 cut(s) 114, 146, 528, 560
BpmI CTGGAG 1 cut(s) 492
Bpu10I CCTNAGC 1 cut(s) 545
BpuEI CTTGAG 2 cut(s) 234, 995
BsaBI GATNNNNATC 1 cut(s) 321
BsaJI CCNNGG 3 cut(s) 480, 599, 926
Bsc4I CCNNNNNNNGG 4 cut(s) 436, 437, 725, 956
Bse1I ACTGG 3 cut(s) 11, 509, 786
Bse8I GATNNNNATC 1 cut(s) 321
BseBI CCWGG 4 cut(s) 96, 482, 928, 951
BseDI CCNNGG 3 cut(s) 480, 599, 926
BseGI GGATG 1 cut(s) 624
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 4 cut(s) 436, 437, 725, 956
BseMII CTCAG 5 cut(s) 145, 559, 638, 681, 723
BseNI ACTGG 3 cut(s) 11, 509, 786
BseRI GAGGAG 1 cut(s) 278
BseSI GKGCMC 1 cut(s) 501
Bsh1236I CGCG 2 cut(s) 331, 371
BshFI GGCC 3 cut(s) 152, 511, 960
BsiHKAI GWGCWC 2 cut(s) 369, 501
BslI CCNNNNNNNGG 4 cut(s) 436, 437, 725, 956
BsmAI GTCTC 1 cut(s) 768
BsmI GAATGC 1 cut(s) 350
BsnI GGCC 3 cut(s) 152, 511, 960
Bsp1286I GDGCHC 3 cut(s) 369, 501, 851
Bsp143I GATC 5 cut(s) 89, 195, 316, 565, 882
BspACI CCGC 4 cut(s) 87, 371, 657, 904
BspANI GGCC 3 cut(s) 152, 511, 960
BspCNI CTCAG 5 cut(s) 144, 558, 637, 680, 722
BspFNI CGCG 2 cut(s) 331, 371
BspHI TCATGA 1 cut(s) 940
BspPI GGATC 2 cut(s) 97, 311
BsrI ACTGG 3 cut(s) 11, 509, 786
BssECI CCNNGG 3 cut(s) 480, 599, 926
BssMI GATC 5 cut(s) 89, 195, 316, 565, 882
BssT1I CCWWGG 1 cut(s) 599
Bst2UI CCWGG 4 cut(s) 96, 482, 928, 951
Bst4CI ACNGT 2 cut(s) 31, 140
Bst6I CTCTTC 1 cut(s) 174
BstC8I GCNNGC 3 cut(s) 301, 369, 787
BstDEI CTNAG 8 cut(s) 131, 393, 545, 624, 644, 667, 709, 1016
BstF5I GGATG 1 cut(s) 624
BstFNI CGCG 2 cut(s) 331, 371
BstKTI GATC 5 cut(s) 92, 198, 319, 568, 885
BstMAI GTCTC 1 cut(s) 768
BstMBI GATC 5 cut(s) 89, 195, 316, 565, 882
BstMWI GCNNNNNNNGC 3 cut(s) 56, 593, 791
BstNI CCWGG 4 cut(s) 96, 482, 928, 951
BstSCI CCNGG 4 cut(s) 94, 480, 926, 949
BstSFI CTRYAG 1 cut(s) 154
BstSLI GKGCMC 1 cut(s) 501
BstUI CGCG 2 cut(s) 331, 371
BstV2I GAAGAC 2 cut(s) 29, 882
BsuRI GGCC 3 cut(s) 152, 511, 960
BtgZI GCGATG 1 cut(s) 312
BtsCI GGATG 1 cut(s) 624
BtsIMutI CAGTG 2 cut(s) 36, 139
Cac8I GCNNGC 3 cut(s) 301, 369, 787
CciI TCATGA 1 cut(s) 940
Cfr13I GGNCC 1 cut(s) 101
CseI GACGC 1 cut(s) 1001
Csp6I GTAC 3 cut(s) 8, 681, 769
CspCI CAANNNNNGTGG 2 cut(s) 447, 482
CviAII CATG 3 cut(s) 209, 445, 941
CviQI GTAC 3 cut(s) 8, 681, 769
DdeI CTNAG 8 cut(s) 131, 393, 545, 624, 644, 667, 709, 1016
DpnI GATC 5 cut(s) 91, 197, 318, 567, 884
DpnII GATC 5 cut(s) 89, 195, 316, 565, 882
DraI TTTAAA 1 cut(s) 1002
DraIII CACNNNGTG 2 cut(s) 647, 722
DriI GACNNNNNGTC 1 cut(s) 33
EaeI YGGCCR 1 cut(s) 958
Eam1104I CTCTTC 1 cut(s) 174
Eam1105I GACNNNNNGTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 174
Ecl136II GAGCTC 1 cut(s) 367
Eco130I CCWWGG 1 cut(s) 599
Eco24I GRGCYC 2 cut(s) 369, 851
Eco47I GGWCC 1 cut(s) 101
Eco53kI GAGCTC 1 cut(s) 367
Eco57I CTGAAG 1 cut(s) 719
EcoICRI GAGCTC 1 cut(s) 367
EcoRI GAATTC 1 cut(s) 803
EcoRII CCWGG 4 cut(s) 94, 480, 926, 949
EcoT14I CCWWGG 1 cut(s) 599
EcoT38I GRGCYC 2 cut(s) 369, 851
ErhI CCWWGG 1 cut(s) 599
FaeI CATG 3 cut(s) 212, 448, 944
FatI CATG 3 cut(s) 208, 444, 940
FokI GGATG 1 cut(s) 631
FriOI GRGCYC 2 cut(s) 369, 851
FspBI CTAG 1 cut(s) 41
GsuI CTGGAG 1 cut(s) 492
HaeIII GGCC 3 cut(s) 152, 511, 960
HgaI GACGC 1 cut(s) 1001
Hin1II CATG 3 cut(s) 212, 448, 944
HindIII AAGCTT 1 cut(s) 920
HinfI GANTC 5 cut(s) 411, 622, 761, 931, 979
HphI GGTGA 1 cut(s) 108
Hpy166II GTNNAC 2 cut(s) 239, 499
Hpy188I TCNGA 7 cut(s) 78, 410, 565, 581, 627, 712, 817
Hpy188III TCNNGA 8 cut(s) 251, 340, 362, 471, 534, 731, 941, 974
Hpy8I GTNNAC 2 cut(s) 239, 499
Hpy99I CGWCG 1 cut(s) 817
HpyAV CCTTC 1 cut(s) 648
HpyCH4III ACNGT 2 cut(s) 31, 140
HpyCH4V TGCA 6 cut(s) 382, 444, 499, 587, 794, 914
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 593, 791
HpyF3I CTNAG 8 cut(s) 131, 393, 545, 624, 644, 667, 709, 1016
Hsp92II CATG 3 cut(s) 212, 448, 944
Kzo9I GATC 5 cut(s) 89, 195, 316, 565, 882
LmnI GCTCC 3 cut(s) 422, 473, 817
MaeI CTAG 1 cut(s) 41
MaeIII GTNAC 3 cut(s) 109, 134, 989
MalI GATC 5 cut(s) 91, 197, 318, 567, 884
MboI GATC 5 cut(s) 89, 195, 316, 565, 882
MboII GAAGA 5 cut(s) 29, 191, 280, 712, 887
MhlI GDGCHC 3 cut(s) 369, 501, 851
MlsI TGGCCA 1 cut(s) 960
MluCI AATT 2 cut(s) 629, 803
MluNI TGGCCA 1 cut(s) 960
MlyI GAGTC 2 cut(s) 616, 988
MmeI TCCRAC 1 cut(s) 795
MnlI CCTC 9 cut(s) 78, 84, 114, 175, 256, 554, 676, 838, 860
Mox20I TGGCCA 1 cut(s) 960
MroXI GAANNNNTTC 1 cut(s) 632
MscI TGGCCA 1 cut(s) 960
MseI TTAA 1 cut(s) 1001
MslI CAYNNNNRTG 2 cut(s) 939, 987
Msp20I TGGCCA 1 cut(s) 960
MspR9I CCNGG 4 cut(s) 96, 482, 928, 951
Mva1269I GAATGC 1 cut(s) 350
MvaI CCWGG 4 cut(s) 96, 482, 928, 951
MvnI CGCG 2 cut(s) 331, 371
MwoI GCNNNNNNNGC 3 cut(s) 56, 593, 791
NdeII GATC 5 cut(s) 89, 195, 316, 565, 882
NlaIII CATG 3 cut(s) 212, 448, 944
NmuCI GTSAC 2 cut(s) 134, 989
PagI TCATGA 1 cut(s) 940
PctI GAATGC 1 cut(s) 350
PdmI GAANNNNTTC 1 cut(s) 632
PfeI GAWTC 3 cut(s) 411, 761, 931
PflMI CCANNNNNTGG 1 cut(s) 725
PleI GAGTC 2 cut(s) 616, 987
PpsI GAGTC 2 cut(s) 616, 987
PsiI TTATAA 1 cut(s) 894
Psp124BI GAGCTC 1 cut(s) 369
Psp6I CCWGG 4 cut(s) 94, 480, 926, 949
PspGI CCWGG 4 cut(s) 94, 480, 926, 949
PspPI GGNCC 1 cut(s) 101
RsaI GTAC 3 cut(s) 9, 682, 770
RsaNI GTAC 3 cut(s) 8, 681, 769
RseI CAYNNNNRTG 2 cut(s) 939, 987
SacI GAGCTC 1 cut(s) 369
SaqAI TTAA 1 cut(s) 1001
Sau3AI GATC 5 cut(s) 89, 195, 316, 565, 882
Sau96I GGNCC 1 cut(s) 101
SchI GAGTC 2 cut(s) 616, 988
ScrFI CCNGG 4 cut(s) 96, 482, 928, 951
SduI GDGCHC 3 cut(s) 369, 501, 851
SetI ASST 8 cut(s) 25, 244, 369, 427, 478, 668, 822, 924
SfcI CTRYAG 1 cut(s) 154
SinI GGWCC 1 cut(s) 101
SmiMI CAYNNNNRTG 2 cut(s) 939, 987
SmlI CTYRAG 2 cut(s) 249, 974
SmoI CTYRAG 2 cut(s) 249, 974
Sse9I AATT 2 cut(s) 629, 803
SsiI CCGC 4 cut(s) 87, 371, 657, 904
SspMI CTAG 1 cut(s) 41
SstI GAGCTC 1 cut(s) 369
StyD4I CCNGG 4 cut(s) 94, 480, 926, 949
StyI CCWWGG 1 cut(s) 599
TaaI ACNGT 2 cut(s) 31, 140
TaqI TCGA 3 cut(s) 291, 354, 807
TasI AATT 2 cut(s) 629, 803
TfiI GAWTC 3 cut(s) 411, 761, 931
Tru1I TTAA 1 cut(s) 1001
Tru9I TTAA 1 cut(s) 1001
TscAI CASTG 2 cut(s) 36, 139
TseFI GTSAC 2 cut(s) 134, 989
Tsp45I GTSAC 2 cut(s) 134, 989
TspDTI ATGAA 4 cut(s) 197, 461, 923, 957
TspRI CASTG 2 cut(s) 36, 139
Van91I CCANNNNNTGG 1 cut(s) 725
VneI GTGCAC 1 cut(s) 497
VpaK11BI GGWCC 1 cut(s) 101
XapI RAATTY 2 cut(s) 629, 803
XmnI GAANNNNTTC 1 cut(s) 632
XspI CTAG 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.