Prupe.6G264900_v2.0.a1
ERF Family

Belongs to the GST superfamily

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
25384008 .. 25385108
1101 bp
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UTR
Exon/CDS
Intron
Prupe.6G264900.1

Sequence Viewer

Length: 663 bp
ATGGGTGAGGAAGTTAAGCTGTTGAGGGTTTGGGGAAGCCCATTTAGTTCCAGAGTGGAAATAGCTCTGAGACTGAAAGGGGTGCAGTATGAGTTCTTTGAAGAGGACCTGCAAAACAAGAGTGCTTTGCTTCTCAAATCCAACCCAGTTCACAAGAAGATCCCTGTGCTCCTGCACAATAACAAACCAATAGCAGAGTCCCAAGTCGTTCTTGAATATATTGATGAGACTTGGAAGCAGGGTTTTTCCATTTTGCCTGAAAATCCTTATGAAAGAGCTCATGCACGCTTCTGGGCTAGGTTCATTGATGAAAAGTGCTTGTCTGCAATATGGAAAGCTTGCTGGGGGAGTGAAGAACATGAGAAGGCTGTGGAAGAAGCATGTGAGCTTCTGAAACTACTTGAACAGGAGCTCAAGGGTAACAAGTTCTTTGGGGGAGAGAAAGTTGGCCTTGTGGATATTGTTGGAAACTTCATAGCCTACTGGCTGAGAGCCATTCAAGAAGTTGTGGGGGTGGAGATTTTGACCAAAGAGAAGCTTCCCAAGCTATACGATTGGAGTGATGAGTTTGTCAATGTTCTTCAGGAAAGTTTGCCTCCAAGAGATAAACTAGTTGCTTTCTTCCGAGGCCGCTTTGAGAGCACCACTACTACTTCCAACTAA

Protein Analysis

221

Amino Acids

25.44

Weight (kDa)

5.56

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 117
AciI CCGC 1 cut(s) 631
AclWI GGATC 1 cut(s) 154
AcuI CTGAAG 1 cut(s) 566
AgsI TTSAA 4 cut(s) 101, 215, 404, 500
AhlI ACTAGT 1 cut(s) 610
AluBI AGCT 8 cut(s) 19, 65, 278, 338, 388, 412, 538, 547
AluI AGCT 8 cut(s) 19, 65, 278, 338, 388, 412, 538, 547
Alw21I GWGCWC 4 cut(s) 171, 280, 414, 644
Alw26I GTCTC 2 cut(s) 64, 221
AlwI GGATC 1 cut(s) 154
AoxI GGCC 2 cut(s) 448, 628
AspS9I GGNCC 1 cut(s) 106
AsuHPI GGTGA 1 cut(s) 17
AvaII GGWCC 1 cut(s) 106
BanII GRGCYC 2 cut(s) 280, 414
Bbv12I GWGCWC 4 cut(s) 171, 280, 414, 644
BcoDI GTCTC 2 cut(s) 64, 221
BcuI ACTAGT 1 cut(s) 610
BfaI CTAG 2 cut(s) 297, 611
BfuAI ACCTGC 1 cut(s) 117
BisI GCNGC 1 cut(s) 631
BlsI GCNGC 1 cut(s) 632
Bme18I GGWCC 1 cut(s) 106
BmgT120I GGNCC 1 cut(s) 106
BmrI ACTGGG 1 cut(s) 140
BmuI ACTGGG 1 cut(s) 140
BpuEI CTTGAG 1 cut(s) 398
BsaJI CCNNGG 1 cut(s) 625
BsaXI ACNNNNNCTCC 2 cut(s) 429, 459
Bse1I ACTGG 2 cut(s) 146, 488
BseDI CCNNGG 1 cut(s) 625
BseMII CTCAG 2 cut(s) 59, 479
BseNI ACTGG 2 cut(s) 146, 488
BseYI CCCAGC 1 cut(s) 342
BsgI GTGCAG 2 cut(s) 104, 158
BshFI GGCC 2 cut(s) 450, 630
BsiHKAI GWGCWC 4 cut(s) 171, 280, 414, 644
BslFI GGGAC 1 cut(s) 184
BsmAI GTCTC 2 cut(s) 64, 221
BsmFI GGGAC 1 cut(s) 184
BsnI GGCC 2 cut(s) 450, 630
Bsp1286I GDGCHC 4 cut(s) 171, 280, 414, 644
Bsp143I GATC 1 cut(s) 159
BspACI CCGC 1 cut(s) 631
BspANI GGCC 2 cut(s) 450, 630
BspCNI CTCAG 2 cut(s) 60, 480
BspMI ACCTGC 1 cut(s) 117
BspPI GGATC 1 cut(s) 154
BsrI ACTGG 2 cut(s) 146, 488
BssECI CCNNGG 1 cut(s) 625
BssMI GATC 1 cut(s) 159
Bst6I CTCTTC 1 cut(s) 96
BstC8I GCNNGC 2 cut(s) 286, 340
BstDEI CTNAG 2 cut(s) 68, 488
BstKTI GATC 1 cut(s) 162
BstMAI GTCTC 2 cut(s) 64, 221
BstMBI GATC 1 cut(s) 159
BstMWI GCNNNNNNNGC 2 cut(s) 544, 639
BstNSI RCATGY 1 cut(s) 384
BstX2I RGATCY 1 cut(s) 159
BstYI RGATCY 1 cut(s) 159
BsuRI GGCC 2 cut(s) 450, 630
BveI ACCTGC 1 cut(s) 117
Cac8I GCNNGC 2 cut(s) 286, 340
Cfr13I GGNCC 1 cut(s) 106
CviAII CATG 3 cut(s) 281, 359, 381
DdeI CTNAG 2 cut(s) 68, 488
DpnI GATC 1 cut(s) 161
DpnII GATC 1 cut(s) 159
Eam1104I CTCTTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 96
Ecl136II GAGCTC 2 cut(s) 278, 412
Eco24I GRGCYC 2 cut(s) 280, 414
Eco47I GGWCC 1 cut(s) 106
Eco53kI GAGCTC 2 cut(s) 278, 412
Eco57I CTGAAG 1 cut(s) 566
EcoICRI GAGCTC 2 cut(s) 278, 412
EcoO109I RGGNCCY 1 cut(s) 106
EcoT38I GRGCYC 2 cut(s) 280, 414
FaeI CATG 3 cut(s) 284, 362, 384
FaiI YATR 9 cut(s) 90, 219, 270, 282, 331, 360, 382, 476, 550
FalI AAGNNNNNCTT 6 cut(s) 195, 227, 435, 467, 522, 554
FaqI GGGAC 1 cut(s) 184
FatI CATG 3 cut(s) 280, 358, 380
Fnu4HI GCNGC 1 cut(s) 631
FriOI GRGCYC 2 cut(s) 280, 414
Fsp4HI GCNGC 1 cut(s) 631
FspBI CTAG 2 cut(s) 297, 611
GluI GCNGC 1 cut(s) 631
GsaI CCCAGC 1 cut(s) 346
HaeIII GGCC 2 cut(s) 450, 630
Hin1II CATG 3 cut(s) 284, 362, 384
HindIII AAGCTT 2 cut(s) 336, 536
HinfI GANTC 1 cut(s) 197
HphI GGTGA 1 cut(s) 17
Hpy166II GTNNAC 1 cut(s) 151
Hpy188I TCNGA 3 cut(s) 69, 393, 626
Hpy188III TCNNGA 4 cut(s) 51, 212, 500, 584
Hpy8I GTNNAC 1 cut(s) 151
HpyAV CCTTC 1 cut(s) 358
HpyCH4V TGCA 5 cut(s) 85, 112, 175, 284, 326
HpyF10VI GCNNNNNNNGC 2 cut(s) 544, 639
HpyF3I CTNAG 2 cut(s) 68, 488
Hsp92II CATG 3 cut(s) 284, 362, 384
Kzo9I GATC 1 cut(s) 159
LmnI GCTCC 2 cut(s) 174, 409
MaeI CTAG 2 cut(s) 297, 611
MaeIII GTNAC 1 cut(s) 419
MalI GATC 1 cut(s) 161
MboI GATC 1 cut(s) 159
MboII GAAGA 6 cut(s) 113, 169, 365, 386, 572, 613
MflI RGATCY 1 cut(s) 159
MhlI GDGCHC 4 cut(s) 171, 280, 414, 644
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 2 cut(s) 165, 445
MnlI CCTC 4 cut(s) 18, 97, 606, 620
MseI TTAA 1 cut(s) 15
MwoI GCNNNNNNNGC 2 cut(s) 544, 639
NdeII GATC 1 cut(s) 159
NlaIII CATG 3 cut(s) 284, 362, 384
NspI RCATGY 1 cut(s) 384
PkrI GCNGC 1 cut(s) 632
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
PpuMI RGGWCCY 1 cut(s) 106
Psp124BI GAGCTC 2 cut(s) 280, 414
Psp5II RGGWCCY 1 cut(s) 106
PspFI CCCAGC 1 cut(s) 342
PspPI GGNCC 1 cut(s) 106
PspPPI RGGWCCY 1 cut(s) 106
PsuI RGATCY 1 cut(s) 159
SacI GAGCTC 2 cut(s) 280, 414
SaqAI TTAA 1 cut(s) 15
SatI GCNGC 1 cut(s) 631
Sau3AI GATC 1 cut(s) 159
Sau96I GGNCC 1 cut(s) 106
SchI GAGTC 1 cut(s) 206
SduI GDGCHC 4 cut(s) 171, 280, 414, 644
SinI GGWCC 1 cut(s) 106
SmlI CTYRAG 1 cut(s) 413
SmoI CTYRAG 1 cut(s) 413
SpeI ACTAGT 1 cut(s) 610
SsiI CCGC 1 cut(s) 631
SspMI CTAG 2 cut(s) 297, 611
SstI GAGCTC 2 cut(s) 280, 414
TauI GCSGC 1 cut(s) 633
Tru1I TTAA 1 cut(s) 15
Tru9I TTAA 1 cut(s) 15
TspDTI ATGAA 4 cut(s) 285, 292, 324, 463
VpaK11BI GGWCC 1 cut(s) 106
XceI RCATGY 1 cut(s) 384
XspI CTAG 2 cut(s) 297, 611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.