Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002879

Physical Location & Seq

Genomic Coordinates Forward (+)

25386456 .. 25387825

Gene Structure 1370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G265000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 681 bp

ATGGCAGAAGCAGAGGAAGTGAAGCACTTTGGGGTTAGGGGAAGCCCATTAAGTCTCAGAGTGGATATAGCTCTGAGACTGAAAGGTGTGAAATCCAAATTCTGCGAAGAGGACCTGCAGAACAAGAGCCCTTTGCTCATCAAATACAATCCAGTTCACAAGAAGGTCCCTGTGCTTGTACACAATGAGAAACCAATAGCAGAGTCCCTTGTTATTCTTGAATACATTGATGAGACTTGGAAGCATCAGGGCCTTCCAATATTGCCTCAAGACCCTTACCAAAGAGCCAATGCACGCTTCTGGGCTAGCTTCATTGATGAGAAGTGCTCACCTGCAATATGCAAAGCTTACTGGGAAATTGAGGGCCATGAGAAGGCTATGGAAGAAGCTTGTGAGCTTCTGCAATCTCTTGAAAATGAGCTCAAGGATAACAAGTTCTTTGGGGGAGAGACAATTGGATTTGTAGATATGGCTGCTAGCTTCATAGGCTACTGGCTTAGACCAATTCAAGAAGCTGTGGGGGTGGAGGTGTTGACCAAAGAGAAGTGTCCCAAGCTATATGATTGGTGTGATGAGTTTGTGAGCCACAGTGTTGTTAAGGAAGTTCTGCCTCCTAATAAAGAAACATTAATTGCCTTCTTCCTTGGTCGCTGTGAAAGCACCAAACTACTTGCAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009408 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009737 GO:0009739 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016740 GO:0016765 GO:0019748 GO:0033993 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0046686 GO:0050896 GO:0051186 GO:0071704 GO:0097305 GO:0098754 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N GST_N_3

Protein Analysis

227

Amino Acids

25.81

Weight (kDa)

5.62

Isoelectric Point (pI)

47.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002879)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09270
fragaria_vesca	FvH4_6g12680 FvH4_6g12690
malus_domestica	MD04G1139400.v1.1 MD04G1139500.v1.1 MD04G1139600.v1.1 MD12G1155200.v1.1
prunus_persica	Prupe.6G264900_v2.0.a1 Prupe.6G265000_v2.0.a1
pyrus_communis	pycom12g14730
rosa_chinensis	RchiOBHm_Chr3g0464521 RchiOBHm_Chr3g0464531 RchiOBHm_Chr3g0464541
rosa_laevigata	RLG00000024684 RLG00000024685 RLG00000024688
rosa_multiflora	Rmu_sc0002031.1_g000017 Rmu_sc0002031.1_g000018 Rmu_sc0002031.1_g000021 Rmu_sc0032314.1_g000002
rosa_roxburghii	Rroxscaffold_4G00321260 Rroxscaffold_6G00415560 Rroxscaffold_6G00415580 Rroxscaffold_6G00415590
rosa_rugosa	Rorug03G0008900 Rorug03G0008900 Rorug03G0072900 Rorug03G0073000 Rorug03G0073000
rosa_samantha	Rh3BG135200 Rh3CG137800 Rh3CG137900 Rh3DG136500 Rh3DG136700 Rh3DG136800
rosa_wichuraiana	Rw3G011050 Rw3G011060 Rw3G011070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	340
Acc36I	ACCTGC	2 cut(s)	123, 340
AcsI	RAATTY	1 cut(s)	98
AfaI	GTAC	1 cut(s)	180
AfiI	CCNNNNNNNGG	1 cut(s)	373
AgsI	TTSAA	3 cut(s)	221, 413, 509
AjuI	GAANNNNNNNTTGG	2 cut(s)	281, 313
AloI	GAACNNNNNNTCC	2 cut(s)	419, 451
AluBI	AGCT	9 cut(s)	71, 309, 347, 389, 397, 421, 480, 515, 556
AluI	AGCT	9 cut(s)	71, 309, 347, 389, 397, 421, 480, 515, 556
Alw21I	GWGCWC	2 cut(s)	329, 423
Alw26I	GTCTC	4 cut(s)	59, 70, 227, 443
AoxI	GGCC	2 cut(s)	250, 364
ApeKI	GCWGC	1 cut(s)	473
ApoI	RAATTY	1 cut(s)	98
AseI	ATTAAT	1 cut(s)	629
AspS9I	GGNCC	4 cut(s)	112, 166, 250, 364
AsuHPI	GGTGA	1 cut(s)	321
AsuNHI	GCTAGC	2 cut(s)	305, 476
AvaII	GGWCC	2 cut(s)	112, 166
BanII	GRGCYC	2 cut(s)	131, 423
Bbv12I	GWGCWC	2 cut(s)	329, 423
BbvI	GCAGC	1 cut(s)	460
BcoDI	GTCTC	4 cut(s)	59, 70, 227, 443
BfaI	CTAG	2 cut(s)	306, 477
BfmI	CTRYAG	1 cut(s)	116
BfuAI	ACCTGC	2 cut(s)	123, 340
BisI	GCNGC	1 cut(s)	474
BlsI	GCNGC	1 cut(s)	475
Bme18I	GGWCC	2 cut(s)	112, 166
BmgT120I	GGNCC	4 cut(s)	112, 166, 250, 364
BmiI	GGNNCC	1 cut(s)	168
BmrI	ACTGGG	1 cut(s)	361
BmsI	GCATC	1 cut(s)	253
BmtI	GCTAGC	2 cut(s)	309, 480
BmuI	ACTGGG	1 cut(s)	361
BplI	GAGNNNNNCTC	2 cut(s)	311, 343
BpuEI	CTTGAG	2 cut(s)	252, 407
BsaJI	CCNNGG	1 cut(s)	643
Bsc4I	CCNNNNNNNGG	1 cut(s)	373
Bse1I	ACTGG	3 cut(s)	152, 356, 497
BseDI	CCNNGG	1 cut(s)	643
BseLI	CCNNNNNNNGG	1 cut(s)	373
BseMII	CTCAG	2 cut(s)	65, 70
BseNI	ACTGG	3 cut(s)	152, 356, 497
BseXI	GCAGC	1 cut(s)	460
BshFI	GGCC	2 cut(s)	252, 366
BsiHKAI	GWGCWC	2 cut(s)	329, 423
BslFI	GGGAC	3 cut(s)	152, 190, 534
BslI	CCNNNNNNNGG	1 cut(s)	373
BsmAI	GTCTC	4 cut(s)	59, 70, 227, 443
BsmFI	GGGAC	3 cut(s)	152, 190, 534
BsnI	GGCC	2 cut(s)	252, 366
Bsp1286I	GDGCHC	3 cut(s)	131, 329, 423
Bsp1407I	TGTACA	1 cut(s)	178
BspANI	GGCC	2 cut(s)	252, 366
BspCNI	CTCAG	2 cut(s)	66, 69
BspLI	GGNNCC	1 cut(s)	168
BspMAI	CTGCAG	1 cut(s)	120
BspMI	ACCTGC	2 cut(s)	123, 340
BspOI	GCTAGC	2 cut(s)	309, 480
BsrGI	TGTACA	1 cut(s)	178
BsrI	ACTGG	3 cut(s)	152, 356, 497
BssECI	CCNNGG	1 cut(s)	643
BssT1I	CCWWGG	1 cut(s)	643
Bst4CI	ACNGT	1 cut(s)	590
Bst6I	CTCTTC	1 cut(s)	102
BstAUI	TGTACA	1 cut(s)	178
BstC8I	GCNNGC	3 cut(s)	295, 307, 478
BstDEI	CTNAG	3 cut(s)	56, 74, 497
BstMAI	GTCTC	4 cut(s)	59, 70, 227, 443
BstMWI	GCNNNNNNNGC	2 cut(s)	486, 657
BstSFI	CTRYAG	1 cut(s)	116
BstV1I	GCAGC	1 cut(s)	460
BsuRI	GGCC	2 cut(s)	252, 366
BtsIMutI	CAGTG	1 cut(s)	595
BveI	ACCTGC	2 cut(s)	123, 340
Cac8I	GCNNGC	3 cut(s)	295, 307, 478
Cfr13I	GGNCC	4 cut(s)	112, 166, 250, 364
Csp6I	GTAC	1 cut(s)	179
CviAII	CATG	1 cut(s)	368
CviQI	GTAC	1 cut(s)	179
DdeI	CTNAG	3 cut(s)	56, 74, 497
Eam1104I	CTCTTC	1 cut(s)	102
EarI	CTCTTC	1 cut(s)	102
Ecl136II	GAGCTC	1 cut(s)	421
Eco130I	CCWWGG	1 cut(s)	643
Eco24I	GRGCYC	2 cut(s)	131, 423
Eco47I	GGWCC	2 cut(s)	112, 166
Eco53kI	GAGCTC	1 cut(s)	421
EcoICRI	GAGCTC	1 cut(s)	421
EcoO109I	RGGNCCY	3 cut(s)	112, 166, 250
EcoT14I	CCWWGG	1 cut(s)	643
EcoT38I	GRGCYC	2 cut(s)	131, 423
ErhI	CCWWGG	1 cut(s)	643
FaeI	CATG	1 cut(s)	371
FaiI	YATR	8 cut(s)	68, 340, 369, 380, 470, 485, 559, 561
FaqI	GGGAC	3 cut(s)	152, 190, 534
FatI	CATG	1 cut(s)	367
Fnu4HI	GCNGC	1 cut(s)	474
FriOI	GRGCYC	2 cut(s)	131, 423
Fsp4HI	GCNGC	1 cut(s)	474
FspBI	CTAG	2 cut(s)	306, 477
GluI	GCNGC	1 cut(s)	474
HaeIII	GGCC	2 cut(s)	252, 366
Hin1II	CATG	1 cut(s)	371
HincII	GTYRAC	1 cut(s)	534
HindII	GTYRAC	1 cut(s)	534
HindIII	AAGCTT	2 cut(s)	345, 387
HinfI	GANTC	1 cut(s)	203
HphI	GGTGA	1 cut(s)	321
Hpy166II	GTNNAC	3 cut(s)	157, 181, 534
Hpy188I	TCNGA	2 cut(s)	59, 75
Hpy188III	TCNNGA	4 cut(s)	218, 269, 410, 509
Hpy8I	GTNNAC	3 cut(s)	157, 181, 534
HpyAV	CCTTC	4 cut(s)	157, 263, 367, 646
HpyCH4III	ACNGT	1 cut(s)	590
HpyCH4V	TGCA	6 cut(s)	118, 293, 335, 342, 403, 674
HpyF10VI	GCNNNNNNNGC	2 cut(s)	486, 657
HpyF3I	CTNAG	3 cut(s)	56, 74, 497
Hsp92II	CATG	1 cut(s)	371
LpnPI	CCDG	8 cut(s)	128, 165, 183, 233, 286, 337, 345, 478
Lsp1109I	GCAGC	1 cut(s)	460
LweI	GCATC	1 cut(s)	253
MaeI	CTAG	2 cut(s)	306, 477
MboII	GAAGA	3 cut(s)	119, 395, 631
MfeI	CAATTG	1 cut(s)	453
MhlI	GDGCHC	3 cut(s)	131, 329, 423
MluCI	AATT	5 cut(s)	98, 357, 453, 504, 630
MlyI	GAGTC	1 cut(s)	212
MnlI	CCTC	6 cut(s)	7, 103, 276, 355, 520, 621
MseI	TTAA	3 cut(s)	50, 597, 629
MunI	CAATTG	1 cut(s)	453
MwoI	GCNNNNNNNGC	2 cut(s)	486, 657
NheI	GCTAGC	2 cut(s)	305, 476
NlaIII	CATG	1 cut(s)	371
NlaIV	GGNNCC	1 cut(s)	168
PaqCI	CACCTGC	1 cut(s)	340
PkrI	GCNGC	1 cut(s)	475
PleI	GAGTC	1 cut(s)	211
PpsI	GAGTC	1 cut(s)	211
PpuMI	RGGWCCY	2 cut(s)	112, 166
PshBI	ATTAAT	1 cut(s)	629
Psp124BI	GAGCTC	1 cut(s)	423
Psp5II	RGGWCCY	2 cut(s)	112, 166
PspN4I	GGNNCC	1 cut(s)	168
PspPI	GGNCC	4 cut(s)	112, 166, 250, 364
PspPPI	RGGWCCY	2 cut(s)	112, 166
PstI	CTGCAG	1 cut(s)	120
RsaI	GTAC	1 cut(s)	180
RsaNI	GTAC	1 cut(s)	179
SacI	GAGCTC	1 cut(s)	423
SaqAI	TTAA	3 cut(s)	50, 597, 629
SatI	GCNGC	1 cut(s)	474
Sau96I	GGNCC	4 cut(s)	112, 166, 250, 364
SchI	GAGTC	1 cut(s)	212
SduI	GDGCHC	3 cut(s)	131, 329, 423
SfaNI	GCATC	1 cut(s)	253
SfcI	CTRYAG	1 cut(s)	116
SinI	GGWCC	2 cut(s)	112, 166
SmlI	CTYRAG	2 cut(s)	267, 422
SmoI	CTYRAG	2 cut(s)	267, 422
Sse9I	AATT	5 cut(s)	98, 357, 453, 504, 630
SspI	AATATT	1 cut(s)	261
SspMI	CTAG	2 cut(s)	306, 477
SstI	GAGCTC	1 cut(s)	423
StyI	CCWWGG	1 cut(s)	643
TaaI	ACNGT	1 cut(s)	590
TasI	AATT	5 cut(s)	98, 357, 453, 504, 630
TatI	WGTACW	1 cut(s)	178
Tru1I	TTAA	3 cut(s)	50, 597, 629
Tru9I	TTAA	3 cut(s)	50, 597, 629
TscAI	CASTG	1 cut(s)	595
TseI	GCWGC	1 cut(s)	473
TspDTI	ATGAA	2 cut(s)	301, 472
TspRI	CASTG	1 cut(s)	595
VpaK11BI	GGWCC	2 cut(s)	112, 166
VspI	ATTAAT	1 cut(s)	629
XapI	RAATTY	1 cut(s)	98
XspI	CTAG	2 cut(s)	306, 477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.