Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002879

Physical Location & Seq

Genomic Coordinates Reverse (-)

5796105 .. 5799646

Gene Structure 3542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0073000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGTACCTAAGAGGCATTTCAGGGATGTGGAGGGTGAAGAGTTTAAGTTTCCGGTACCGGAATCGAAAAGGAGACCTCTTTTTAAGAATGTTGCTAGGGATGTGATGAGAGATGGTCCATTGAATGAAAAAGCGTGGGAAAATTTCTTCAGAACAGTGGTGCGAGATGAGCTGGAAAATTTGCTTGTTCCCTACCTGAGGGGATCTTCAAGCAGGCCCCCGCTTCAAATTGGAGGTCCAGCTGGAGTAAGAGGCTTACAGTTGCATTTCATCAACAAACTGCCATCAACCATATTCACAGGCAGCAAGGTGGATGCAGAAGACCAAACACCTCTTCAAATTGTACTACGTGATGCTGCTACGCAGAATGTAGTCCGTTGTGGTCCCCTAGCTTCAGCAAAGATTGAAATTCTTGTTCTGAATAGCGAATTCGGTTCTGATGATCAAGAGGATTGGACCGAGGAAGAGTTCAGCAATGGTCTTGTTCGAGAACGAGAAGGGAAAAGGCCATTGGTGACTGGTGACGTGACTCTTAACCTGCGGGATGGAGTGTGTTCTCTAACTAACATTGTCTTCACTGACAATTCGAGCTGGATCAGAAGCCGAAAGTTCAGACTAGGAGCTAGAGCTGTGCCGAAAAATCCTGCTGATGAAGCACGAATCAGGGAAGCTAGAAGTGAGGCTTTTGTGGTAAAAGATCACCGCGGAGAGTTGTACAAGAAACACCACCCTCCATCCCTGAGTGATGAGATATGGCGCCTGGAGAAGATAGCAAAGGACGGCGCCTTCCATAACAGATTGTTCAATTGTGGAATTACTTGTGTGAAGGACTTGCTGCGGACTTATGTGAAAGATCCATCCTCGCTACGGAATTGTTTTGCTCCGATCTCAAACAAGGCATGGTATGCAATCTTAGATCATGCATTCAAGTGTGAGATAGATGAACATAAGCTCTATGCTTACCATAGAGATGATGTGACCCTCCTGTTCAACATAATCTACAAGTTCAAGGGAGCAGTAATTGAGGACCAATTCTGTACTCTGGATCAACTCACCCCACCTCAAAAGGTTATGGTGGAAAATTTGAAGCAGCAGGCGTATAGAAATGAAGTTAATATGGTCCTCATAGATGCTTCGACTGTGTATGGCATTTCAAGGCCTTTGCCGAGTCTACCAGCAGAGCCATTCAATAATCCAAACTCAGATCCGCAACAATATAGTTTCCAATTCCCACAGCAAGATGTACCGCCAATGCAATTGGGTTTCCCCCACGCATCACCTTCGACTTCATATCCTTATCAAGCAGAAGGAAGCAATCAGTTCATGGTTTCTGTAGCACAAACTAGTCATCCAATGCAAGTGTTCGCTCCAGCACTACGCAACAGTTTCTCAATGGAGGAGTTCAGCACCTTAAACTTCAATGCAGAAAACAGTTGGCCTCCAATTGTGTCAACTGCTCATTTAGGCACTACTGAAAATTTTTTACAAACATCAACTTGGTCTCCAATGAACCCAAACTGGGGGGGACAAGGGAACGGATTTTGCGATACTGGCATTCCTGGTTTTTTACATAACGCAGGGACTATAAAGAAACCCAAGGCACGCTGGTGCAAGCTTCGTGCCGCCATTAAGTGGTGGGTTTCGGTTAGGGCTAGAAGAATGGCAAGGCCTCTGTATTTGGCCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009408 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009737 GO:0009739 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016740 GO:0016765 GO:0019748 GO:0033993 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0046686 GO:0050896 GO:0051186 GO:0071704 GO:0097305 GO:0098754 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N GST_N_3

Protein Analysis

562

Amino Acids

63.77

Weight (kDa)

8.7

Isoelectric Point (pI)

42.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Calmodulin_bind	PF07887	86 - 234	4.8e-58	Calmodulin binding protein-like N-terminal domain
Calmod_bind_M	PF20451	247 - 311	1.6e-23	Calmodulin binding protein central domain
Calmod_bind_C	PF20452	317 - 369	1.9e-15	Calmodulin binding protein C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002879)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09270
fragaria_vesca	FvH4_6g12680 FvH4_6g12690
malus_domestica	MD04G1139400.v1.1 MD04G1139500.v1.1 MD04G1139600.v1.1 MD12G1155200.v1.1
prunus_persica	Prupe.6G264900_v2.0.a1 Prupe.6G265000_v2.0.a1
pyrus_communis	pycom12g14730
rosa_chinensis	RchiOBHm_Chr3g0464521 RchiOBHm_Chr3g0464531 RchiOBHm_Chr3g0464541
rosa_laevigata	RLG00000024684 RLG00000024685 RLG00000024688
rosa_multiflora	Rmu_sc0002031.1_g000017 Rmu_sc0002031.1_g000018 Rmu_sc0002031.1_g000021 Rmu_sc0032314.1_g000002
rosa_roxburghii	Rroxscaffold_4G00321260 Rroxscaffold_6G00415560 Rroxscaffold_6G00415580 Rroxscaffold_6G00415590
rosa_rugosa	Rorug03G0008900 Rorug03G0008900 Rorug03G0072900 Rorug03G0073000 Rorug03G0073000
rosa_samantha	Rh3BG135200 Rh3CG137800 Rh3CG137900 Rh3DG136500 Rh3DG136700 Rh3DG136800
rosa_wichuraiana	Rw3G011050 Rw3G011060 Rw3G011070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	546
Acc65I	GGTACC	2 cut(s)	4, 55
AccB1I	GGYRCC	4 cut(s)	4, 55, 756, 782
AccB7I	CCANNNNNTGG	1 cut(s)	1632
AccI	GTMKAC	1 cut(s)	1171
AccII	CGCG	1 cut(s)	705
AciI	CCGC	8 cut(s)	221, 541, 703, 705, 838, 1208, 1247, 1623
AclWI	GGATC	5 cut(s)	211, 602, 848, 1053, 1199
AcoI	YGGCCR	1 cut(s)	1680
AcsI	RAATTY	6 cut(s)	142, 178, 408, 428, 1081, 1477
AcuI	CTGAAG	2 cut(s)	133, 378
AcyI	GRCGYC	2 cut(s)	757, 783
AfaI	GTAC	6 cut(s)	6, 57, 345, 716, 1039, 1245
AfiI	CCNNNNNNNGG	5 cut(s)	198, 867, 1519, 1520, 1632
AhlI	ACTAGT	1 cut(s)	1343
AjiI	CACGTC	1 cut(s)	526
AjnI	CCWGG	2 cut(s)	759, 1558
AjuI	GAANNNNNNNTTGG	4 cut(s)	318, 350, 494, 526
AleI	CACNNNNGTG	1 cut(s)	1606
Alw26I	GTCTC	2 cut(s)	67, 1506
AlwI	GGATC	5 cut(s)	211, 602, 848, 1053, 1199
AoxI	GGCC	6 cut(s)	215, 506, 1157, 1436, 1667, 1680
ApeKI	GCWGC	4 cut(s)	303, 356, 835, 1090
ApoI	RAATTY	6 cut(s)	142, 178, 408, 428, 1081, 1477
ArsI	GACNNNNNNTTYG	2 cut(s)	220, 252
Asp718I	GGTACC	2 cut(s)	4, 55
AspLEI	GCGC	2 cut(s)	759, 785
AspS9I	GGNCC	7 cut(s)	116, 216, 236, 383, 456, 1027, 1120
AsuHPI	GGTGA	6 cut(s)	47, 526, 533, 692, 1045, 1269
AvaII	GGWCC	6 cut(s)	116, 236, 383, 456, 1027, 1120
AxyI	CCTNAGG	1 cut(s)	197
BalI	TGGCCA	1 cut(s)	1682
BanI	GGYRCC	4 cut(s)	4, 55, 756, 782
BbsI	GAAGAC	2 cut(s)	327, 565
BbvI	GCAGC	4 cut(s)	315, 343, 822, 1102
BccI	CCATC	5 cut(s)	107, 292, 539, 742, 865
BceAI	ACGGC	1 cut(s)	796
BcgI	CGANNNNNNTGC	2 cut(s)	1263, 1297
BciT130I	CCWGG	2 cut(s)	761, 1560
BclI	TGATCA	1 cut(s)	442
BcoDI	GTCTC	2 cut(s)	67, 1506
BcuI	ACTAGT	1 cut(s)	1343
BfaI	CTAG	8 cut(s)	96, 389, 617, 624, 672, 1344, 1653, 1687
BfmI	CTRYAG	1 cut(s)	1332
BfoI	RGCGCY	2 cut(s)	760, 786
BfuAI	ACCTGC	1 cut(s)	546
BisI	GCNGC	5 cut(s)	304, 357, 836, 1091, 1623
BlsI	GCNGC	5 cut(s)	305, 358, 837, 1092, 1624
Bme1390I	CCNGG	2 cut(s)	761, 1560
Bme18I	GGWCC	6 cut(s)	116, 236, 383, 456, 1027, 1120
BmgBI	CACGTC	1 cut(s)	526
BmgT120I	GGNCC	7 cut(s)	116, 216, 236, 383, 456, 1027, 1120
BmiI	GGNNCC	6 cut(s)	6, 57, 218, 385, 758, 784
BmrFI	CCNGG	2 cut(s)	761, 1560
BmrI	ACTGGG	1 cut(s)	1528
BmsI	GCATC	4 cut(s)	304, 343, 1120, 1283
BmuI	ACTGGG	1 cut(s)	1528
BpiI	GAAGAC	2 cut(s)	327, 565
BpmI	CTGGAG	3 cut(s)	264, 782, 1353
BsaAI	YACGTR	1 cut(s)	350
BsaHI	GRCGYC	2 cut(s)	757, 783
BsaI	GGTCTC	2 cut(s)	67, 1506
BsaJI	CCNNGG	3 cut(s)	459, 703, 1596
BsaWI	WCCGGW	2 cut(s)	52, 58
BsaXI	ACNNNNNCTCC	2 cut(s)	1486, 1516
Bsc4I	CCNNNNNNNGG	5 cut(s)	198, 867, 1519, 1520, 1632
Bse1I	ACTGG	3 cut(s)	523, 1523, 1555
Bse21I	CCTNAGG	1 cut(s)	197
Bse3DI	GCAATG	1 cut(s)	481
BseBI	CCWGG	2 cut(s)	761, 1560
BseDI	CCNNGG	3 cut(s)	459, 703, 1596
BseGI	GGATG	7 cut(s)	31, 106, 319, 550, 734, 857, 1348
BseLI	CCNNNNNNNGG	5 cut(s)	198, 867, 1519, 1520, 1632
BseMI	GCAATG	1 cut(s)	481
BseMII	CTCAG	3 cut(s)	188, 731, 1215
BseNI	ACTGG	3 cut(s)	523, 1523, 1555
BseRI	GAGGAG	1 cut(s)	1412
BseXI	GCAGC	4 cut(s)	315, 343, 822, 1102
Bsh1236I	CGCG	1 cut(s)	705
BshFI	GGCC	6 cut(s)	217, 508, 1159, 1438, 1669, 1682
BshNI	GGYRCC	4 cut(s)	4, 55, 756, 782
BsiSI	CCGG	2 cut(s)	53, 59
BslFI	GGGAC	3 cut(s)	369, 1539, 1594
BslI	CCNNNNNNNGG	5 cut(s)	198, 867, 1519, 1520, 1632
BsmAI	GTCTC	2 cut(s)	67, 1506
BsmFI	GGGAC	3 cut(s)	369, 1539, 1594
BsmI	GAATGC	2 cut(s)	923, 1554
BsnI	GGCC	6 cut(s)	217, 508, 1159, 1438, 1669, 1682
Bso31I	GGTCTC	2 cut(s)	67, 1506
Bsp1407I	TGTACA	1 cut(s)	714
Bsp143I	GATC	9 cut(s)	203, 442, 594, 697, 853, 885, 916, 1045, 1204
BspACI	CCGC	8 cut(s)	221, 541, 703, 705, 838, 1208, 1247, 1623
BspANI	GGCC	6 cut(s)	217, 508, 1159, 1438, 1669, 1682
BspCNI	CTCAG	3 cut(s)	189, 732, 1214
BspFNI	CGCG	1 cut(s)	705
BspLI	GGNNCC	6 cut(s)	6, 57, 218, 385, 758, 784
BspMI	ACCTGC	1 cut(s)	546
BspPI	GGATC	5 cut(s)	211, 602, 848, 1053, 1199
BspT107I	GGYRCC	4 cut(s)	4, 55, 756, 782
BspTNI	GGTCTC	2 cut(s)	67, 1506
BsrDI	GCAATG	1 cut(s)	481
BsrGI	TGTACA	1 cut(s)	714
BsrI	ACTGG	3 cut(s)	523, 1523, 1555
BssECI	CCNNGG	3 cut(s)	459, 703, 1596
BssMI	GATC	9 cut(s)	203, 442, 594, 697, 853, 885, 916, 1045, 1204
BssNI	GRCGYC	2 cut(s)	757, 783
BssT1I	CCWWGG	1 cut(s)	1596
Bst2UI	CCWGG	2 cut(s)	761, 1560
Bst4CI	ACNGT	5 cut(s)	157, 261, 1141, 1385, 1433
Bst6I	CTCTTC	3 cut(s)	33, 339, 459
BstACI	GRCGYC	2 cut(s)	757, 783
BstAPI	GCANNNNNTGC	1 cut(s)	905
BstAUI	TGTACA	1 cut(s)	714
BstBAI	YACGTR	1 cut(s)	350
BstC8I	GCNNGC	5 cut(s)	215, 1095, 1603, 1613, 1684
BstDEI	CTNAG	5 cut(s)	9, 197, 740, 913, 1201
BstDSI	CCRYGG	1 cut(s)	703
BstENI	CCTNNNNNAGG	1 cut(s)	196
BstF5I	GGATG	7 cut(s)	31, 106, 319, 550, 734, 857, 1348
BstFNI	CGCG	1 cut(s)	705
BstH2I	RGCGCY	2 cut(s)	760, 786
BstHHI	GCGC	2 cut(s)	759, 785
BstKTI	GATC	9 cut(s)	206, 445, 597, 700, 856, 888, 919, 1048, 1207
BstMAI	GTCTC	2 cut(s)	67, 1506
BstMBI	GATC	9 cut(s)	203, 442, 594, 697, 853, 885, 916, 1045, 1204
BstMWI	GCNNNNNNNGC	4 cut(s)	169, 653, 905, 1551
BstNI	CCWGG	2 cut(s)	761, 1560
BstSCI	CCNGG	2 cut(s)	759, 1558
BstSFI	CTRYAG	1 cut(s)	1332
BstUI	CGCG	1 cut(s)	705
BstV1I	GCAGC	4 cut(s)	315, 343, 822, 1102
BstV2I	GAAGAC	2 cut(s)	327, 565
BstX2I	RGATCY	3 cut(s)	203, 853, 1204
BstYI	RGATCY	3 cut(s)	203, 853, 1204
Bsu36I	CCTNAGG	1 cut(s)	197
BsuRI	GGCC	6 cut(s)	217, 508, 1159, 1438, 1669, 1682
BtgI	CCRYGG	1 cut(s)	703
BtrI	CACGTC	1 cut(s)	526
BtsCI	GGATG	7 cut(s)	31, 106, 319, 550, 734, 857, 1348
BtsIMutI	CAGTG	2 cut(s)	162, 576
BveI	ACCTGC	1 cut(s)	546
Cac8I	GCNNGC	5 cut(s)	215, 1095, 1603, 1613, 1684
CfoI	GCGC	2 cut(s)	759, 785
Cfr13I	GGNCC	7 cut(s)	116, 216, 236, 383, 456, 1027, 1120
Cfr42I	CCGCGG	1 cut(s)	706
Csp6I	GTAC	6 cut(s)	5, 56, 344, 715, 1038, 1244
CviAII	CATG	3 cut(s)	900, 920, 1324
CviQI	GTAC	6 cut(s)	5, 56, 344, 715, 1038, 1244
DdeI	CTNAG	5 cut(s)	9, 197, 740, 913, 1201
DinI	GGCGCC	2 cut(s)	758, 784
DpnI	GATC	9 cut(s)	205, 444, 596, 699, 855, 887, 918, 1047, 1206
DpnII	GATC	9 cut(s)	203, 442, 594, 697, 853, 885, 916, 1045, 1204
EaeI	YGGCCR	1 cut(s)	1680
Eam1104I	CTCTTC	3 cut(s)	33, 339, 459
EarI	CTCTTC	3 cut(s)	33, 339, 459
Eco130I	CCWWGG	1 cut(s)	1596
Eco147I	AGGCCT	2 cut(s)	1159, 1669
Eco31I	GGTCTC	2 cut(s)	67, 1506
Eco47I	GGWCC	6 cut(s)	116, 236, 383, 456, 1027, 1120
Eco57I	CTGAAG	2 cut(s)	133, 378
Eco81I	CCTNAGG	1 cut(s)	197
EcoNI	CCTNNNNNAGG	1 cut(s)	196
EcoO109I	RGGNCCY	1 cut(s)	216
EcoRI	GAATTC	1 cut(s)	428
EcoRII	CCWGG	2 cut(s)	759, 1558
EcoT14I	CCWWGG	1 cut(s)	1596
EcoT22I	ATGCAT	1 cut(s)	925
EgeI	GGCGCC	2 cut(s)	758, 784
EheI	GGCGCC	2 cut(s)	758, 784
ErhI	CCWWGG	1 cut(s)	1596
FaeI	CATG	3 cut(s)	903, 923, 1327
FalI	AAGNNNNNCTT	2 cut(s)	667, 699
FaqI	GGGAC	3 cut(s)	369, 1539, 1594
FatI	CATG	3 cut(s)	899, 919, 1323
FauI	CCCGC	2 cut(s)	228, 534
FbaI	TGATCA	1 cut(s)	442
FblI	GTMKAC	1 cut(s)	1171
Fnu4HI	GCNGC	5 cut(s)	304, 357, 836, 1091, 1623
FokI	GGATG	7 cut(s)	38, 113, 326, 557, 721, 844, 1335
Fsp4HI	GCNGC	5 cut(s)	304, 357, 836, 1091, 1623
FspBI	CTAG	8 cut(s)	96, 389, 617, 624, 672, 1344, 1653, 1687
GlaI	GCGC	2 cut(s)	758, 784
GluI	GCNGC	5 cut(s)	304, 357, 836, 1091, 1623
GsuI	CTGGAG	3 cut(s)	264, 782, 1353
HaeII	RGCGCY	2 cut(s)	760, 786
HaeIII	GGCC	6 cut(s)	217, 508, 1159, 1438, 1669, 1682
HapII	CCGG	2 cut(s)	53, 59
HhaI	GCGC	2 cut(s)	759, 785
Hin1I	GRCGYC	2 cut(s)	757, 783
Hin1II	CATG	3 cut(s)	903, 923, 1327
Hin6I	GCGC	2 cut(s)	757, 783
HinP1I	GCGC	2 cut(s)	757, 783
HincII	GTYRAC	1 cut(s)	1452
HindII	GTYRAC	1 cut(s)	1452
HindIII	AAGCTT	1 cut(s)	1613
HinfI	GANTC	4 cut(s)	62, 529, 660, 1168
HpaII	CCGG	2 cut(s)	53, 59
HphI	GGTGA	6 cut(s)	47, 526, 533, 692, 1045, 1269
Hpy166II	GTNNAC	2 cut(s)	1172, 1452
Hpy188I	TCNGA	7 cut(s)	152, 420, 439, 599, 614, 885, 1204
Hpy188III	TCNNGA	3 cut(s)	446, 488, 1043
Hpy8I	GTNNAC	2 cut(s)	1172, 1452
HpyAV	CCTTC	5 cut(s)	491, 796, 820, 1290, 1301
HpyCH4III	ACNGT	5 cut(s)	157, 261, 1141, 1385, 1433
HpyCH4IV	ACGT	2 cut(s)	349, 525
HpyCH4V	TGCA	8 cut(s)	265, 317, 908, 923, 1255, 1357, 1424, 1611
HpyF10VI	GCNNNNNNNGC	4 cut(s)	169, 653, 905, 1551
HpyF3I	CTNAG	5 cut(s)	9, 197, 740, 913, 1201
HpySE526I	ACGT	2 cut(s)	349, 525
Hsp92I	GRCGYC	2 cut(s)	757, 783
Hsp92II	CATG	3 cut(s)	903, 923, 1327
HspAI	GCGC	2 cut(s)	757, 783
KasI	GGCGCC	2 cut(s)	756, 782
KpnI	GGTACC	2 cut(s)	8, 59
Ksp22I	TGATCA	1 cut(s)	442
KspI	CCGCGG	1 cut(s)	706
Kzo9I	GATC	9 cut(s)	203, 442, 594, 697, 853, 885, 916, 1045, 1204
LmnI	GCTCC	4 cut(s)	620, 886, 1013, 1372
Lsp1109I	GCAGC	4 cut(s)	315, 343, 822, 1102
LweI	GCATC	4 cut(s)	304, 343, 1120, 1283
MaeI	CTAG	8 cut(s)	96, 389, 617, 624, 672, 1344, 1653, 1687
MaeII	ACGT	2 cut(s)	349, 525
MaeIII	GTNAC	4 cut(s)	514, 521, 526, 976
MalI	GATC	9 cut(s)	205, 444, 596, 699, 855, 887, 918, 1047, 1206
MboI	GATC	9 cut(s)	203, 442, 594, 697, 853, 885, 916, 1045, 1204
MboII	GAAGA	9 cut(s)	50, 139, 198, 326, 332, 476, 565, 778, 1668
MfeI	CAATTG	3 cut(s)	805, 1256, 1443
MflI	RGATCY	3 cut(s)	203, 853, 1204
MlsI	TGGCCA	1 cut(s)	1682
MluNI	TGGCCA	1 cut(s)	1682
Mly113I	GGCGCC	2 cut(s)	757, 783
MlyI	GAGTC	2 cut(s)	523, 1177
Mox20I	TGGCCA	1 cut(s)	1682
Mph1103I	ATGCAT	1 cut(s)	925
MscI	TGGCCA	1 cut(s)	1682
MseI	TTAA	6 cut(s)	45, 84, 534, 1113, 1412, 1629
MslI	CAYNNNNRTG	3 cut(s)	928, 969, 1606
Msp20I	TGGCCA	1 cut(s)	1682
MspA1I	CMGCKG	2 cut(s)	242, 705
MspI	CCGG	2 cut(s)	53, 59
MspR9I	CCNGG	2 cut(s)	761, 1560
MunI	CAATTG	3 cut(s)	805, 1256, 1443
Mva1269I	GAATGC	2 cut(s)	923, 1554
MvaI	CCWGG	2 cut(s)	761, 1560
MvnI	CGCG	1 cut(s)	705
MwoI	GCNNNNNNNGC	4 cut(s)	169, 653, 905, 1551
NarI	GGCGCC	2 cut(s)	757, 783
NdeII	GATC	9 cut(s)	203, 442, 594, 697, 853, 885, 916, 1045, 1204
NlaIII	CATG	3 cut(s)	903, 923, 1327
NlaIV	GGNNCC	6 cut(s)	6, 57, 218, 385, 758, 784
NmeAIII	GCCGAG	1 cut(s)	1191
NmuCI	GTSAC	4 cut(s)	514, 521, 526, 976
NsiI	ATGCAT	1 cut(s)	925
OliI	CACNNNNGTG	1 cut(s)	1606
PceI	AGGCCT	2 cut(s)	1159, 1669
PcsI	WCGNNNNNNNCGW	1 cut(s)	1542
PctI	GAATGC	2 cut(s)	923, 1554
PfeI	GAWTC	2 cut(s)	62, 660
PflMI	CCANNNNNTGG	1 cut(s)	1632
PkrI	GCNGC	5 cut(s)	305, 358, 837, 1092, 1624
PleI	GAGTC	2 cut(s)	523, 1176
PluTI	GGCGCC	2 cut(s)	760, 786
PpsI	GAGTC	2 cut(s)	523, 1176
Ppu21I	YACGTR	1 cut(s)	350
Psp6I	CCWGG	2 cut(s)	759, 1558
PspGI	CCWGG	2 cut(s)	759, 1558
PspN4I	GGNNCC	6 cut(s)	6, 57, 218, 385, 758, 784
PspPI	GGNCC	7 cut(s)	116, 216, 236, 383, 456, 1027, 1120
PsuI	RGATCY	3 cut(s)	203, 853, 1204
PvuII	CAGCTG	1 cut(s)	242
RsaI	GTAC	6 cut(s)	6, 57, 345, 716, 1039, 1245
RsaNI	GTAC	6 cut(s)	5, 56, 344, 715, 1038, 1244
RseI	CAYNNNNRTG	3 cut(s)	928, 969, 1606
SacII	CCGCGG	1 cut(s)	706
SaqAI	TTAA	6 cut(s)	45, 84, 534, 1113, 1412, 1629
SatI	GCNGC	5 cut(s)	304, 357, 836, 1091, 1623
Sau3AI	GATC	9 cut(s)	203, 442, 594, 697, 853, 885, 916, 1045, 1204
Sau96I	GGNCC	7 cut(s)	116, 216, 236, 383, 456, 1027, 1120
SchI	GAGTC	2 cut(s)	523, 1177
ScrFI	CCNGG	2 cut(s)	761, 1560
SfaNI	GCATC	4 cut(s)	304, 343, 1120, 1283
SfcI	CTRYAG	1 cut(s)	1332
SfoI	GGCGCC	2 cut(s)	758, 784
Sfr303I	CCGCGG	1 cut(s)	706
SgrBI	CCGCGG	1 cut(s)	706
SinI	GGWCC	6 cut(s)	116, 236, 383, 456, 1027, 1120
SmiMI	CAYNNNNRTG	3 cut(s)	928, 969, 1606
SpeI	ACTAGT	1 cut(s)	1343
SseBI	AGGCCT	2 cut(s)	1159, 1669
SsiI	CCGC	8 cut(s)	221, 541, 703, 705, 838, 1208, 1247, 1623
SspDI	GGCGCC	2 cut(s)	756, 782
SspMI	CTAG	8 cut(s)	96, 389, 617, 624, 672, 1344, 1653, 1687
StuI	AGGCCT	2 cut(s)	1159, 1669
StyD4I	CCNGG	2 cut(s)	759, 1558
StyI	CCWWGG	1 cut(s)	1596
TaaI	ACNGT	5 cut(s)	157, 261, 1141, 1385, 1433
TaiI	ACGT	2 cut(s)	352, 528
TaqI	TCGA	5 cut(s)	65, 487, 587, 1136, 1283
TaqII	GACCGA	1 cut(s)	473
TatI	WGTACW	3 cut(s)	343, 714, 1037
TauI	GCSGC	1 cut(s)	1625
TfiI	GAWTC	2 cut(s)	62, 660
Tru1I	TTAA	6 cut(s)	45, 84, 534, 1113, 1412, 1629
Tru9I	TTAA	6 cut(s)	45, 84, 534, 1113, 1412, 1629
TscAI	CASTG	2 cut(s)	162, 583
TseFI	GTSAC	4 cut(s)	514, 521, 526, 976
TseI	GCWGC	4 cut(s)	303, 356, 835, 1090
Tsp45I	GTSAC	4 cut(s)	514, 521, 526, 976
TspDTI	ATGAA	8 cut(s)	141, 259, 666, 957, 1122, 1278, 1312, 1523
TspGWI	ACGGA	3 cut(s)	365, 883, 1551
TspRI	CASTG	2 cut(s)	162, 583
Van91I	CCANNNNNTGG	1 cut(s)	1632
VpaK11BI	GGWCC	6 cut(s)	116, 236, 383, 456, 1027, 1120
XagI	CCTNNNNNAGG	1 cut(s)	196
XapI	RAATTY	6 cut(s)	142, 178, 408, 428, 1081, 1477
XmiI	GTMKAC	1 cut(s)	1171
XspI	CTAG	8 cut(s)	96, 389, 617, 624, 672, 1344, 1653, 1687
Zsp2I	ATGCAT	1 cut(s)	925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.