Prupe.6G348800_v2.0.a1

ASCH domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
29785167 .. 29790030
4864 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G348800.12

Sequence Viewer

Length: 1077 bp
ATGAGGAGAGGGCATTCTTCTGGGAATTACAGAAACCCATGTTTGACTATGCACCAGCCATGGGCTTCTTTGCTGGTTTATGGTATCAAGCGCATCGAAGGCCGGACATGGGCCGCTCCTATTAGAGGGCGCCTTTGGATTCATGCCGCTAGTAAGGTTCCTGATGAGGCTACAATCAAAGCAATGGAGGACTTCTACAGGGAAATTTATGCAGTGGATGGAATCGCTGATCTTAAATTTCCAGAGTATTATCCAGTTTCAAGACTTTTAGGGTGTGTTGAAGTGGTTGGATGTGTTAGACGTGAAGAACTAGCATGCTGGGAGATGGTACCTGAAGGGGTGAGGCTGGAAGCACAAACTGATTTATGTTGGCTTTGCGAGCAGCCACAGAAATTGTTAATTCCGTTTGAGATGCGTGGGTACCAAGGTGTTTATAACTTGGAAAAGAAGATATATGAAGCTGCTATTAGAGGTCTTACCCCGGTTGAAGGTCCCCTTCCAGTAAAATTTTTACTTCCAAATCCACAAGATCCATTTTCGTTGAAACCAGGGTCTATCTCTGCAAATGTCCCAGAAACTAGAACTTCTGAACTGGAGAGATCTTCAAGTCTCACAGCGGCCATAGCTGGTGCACGAGCAGCAGCTACACAGTTCTCCAAGAAAGTTCAAGATCTTGAAACAACTCCCCAAACTAATACAGCACAATCTGTAAGGACACTTCCATTAAAGAGTGAATCTTTTGAAGAGGATACAACGCCATCTGCTAACTTAAGTGAGACCTCTAATAAGGGGGCATTAACATCAAATAACAAGGAGAAAATAAGTCCCATTAAGTATGAGGAAATCACCCGCCCCAGTCAACCTTCTTCTGGAGGTTTGAGACCTCATCCTGGTGCACCTTCTAAGCTGTATGTAGTATTTGATTTGAGGTTGGGTCATTTTAACCAAAAGGCATTACAAGGCTGCATAGAATATATCTGGTTGTGGAGTGAAGACAGAACTATAATAGAATTCTTACTTTGGTTTGTAAAACAATGCATCGGTAGGGCAGCATTTCACCTAGAGGGGAGCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

359

Amino Acids

40.17

Weight (kDa)

7.56

Isoelectric Point (pI)

50.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 435
Acc65I GGTACC 2 cut(s) 328, 420
AccB1I GGYRCC 3 cut(s) 129, 328, 420
AccBSI CCGCTC 1 cut(s) 116
AciI CCGC 4 cut(s) 114, 147, 617, 850
AclWI GGATC 1 cut(s) 524
AcoI YGGCCR 1 cut(s) 618
AcsI RAATTY 4 cut(s) 204, 236, 506, 1010
AcuI CTGAAG 1 cut(s) 354
AcyI GRCGYC 1 cut(s) 130
AfaI GTAC 2 cut(s) 330, 422
AfiI CCNNNNNNNGG 6 cut(s) 61, 109, 125, 488, 869, 890
AflII CTTAAG 1 cut(s) 769
AgsI TTSAA 8 cut(s) 261, 281, 488, 544, 606, 668, 677, 743
AjiI CACGTC 1 cut(s) 302
AjnI CCWGG 2 cut(s) 547, 889
AluBI AGCT 4 cut(s) 461, 626, 644, 907
AluI AGCT 4 cut(s) 461, 626, 644, 907
Alw21I GWGCWC 3 cut(s) 634, 898, 1073
Alw26I GTCTC 3 cut(s) 614, 770, 874
Alw44I GTGCAC 2 cut(s) 630, 894
AlwI GGATC 1 cut(s) 524
AoxI GGCC 3 cut(s) 100, 111, 618
ApaLI GTGCAC 2 cut(s) 630, 894
ApeKI GCWGC 6 cut(s) 382, 461, 638, 641, 963, 1049
ApoI RAATTY 4 cut(s) 204, 236, 506, 1010
Asp718I GGTACC 2 cut(s) 328, 420
AspLEI GCGC 2 cut(s) 93, 132
AspS9I GGNCC 2 cut(s) 111, 491
AsuC2I CCSGG 1 cut(s) 482
AsuHPI GGTGA 3 cut(s) 352, 838, 1049
AvaII GGWCC 1 cut(s) 491
BaeGI GKGCMC 2 cut(s) 634, 898
BaeI ACNNNNGTAYC 2 cut(s) 412, 445
BanI GGYRCC 3 cut(s) 129, 328, 420
BarI GAAGNNNNNNTAC 2 cut(s) 702, 734
BauI CACGAG 1 cut(s) 633
BbsI GAAGAC 1 cut(s) 999
Bbv12I GWGCWC 3 cut(s) 634, 898, 1073
BbvI GCAGC 6 cut(s) 394, 448, 650, 653, 950, 1061
BccI CCATC 3 cut(s) 212, 319, 766
BciT130I CCWGG 2 cut(s) 549, 891
BciVI GTATCC 1 cut(s) 742
BcnI CCSGG 1 cut(s) 482
BcoDI GTCTC 3 cut(s) 614, 770, 874
BfaI CTAG 4 cut(s) 150, 311, 579, 1061
BfmI CTRYAG 1 cut(s) 196
BfoI RGCGCY 1 cut(s) 133
BfrI CTTAAG 1 cut(s) 769
BfuI GTATCC 1 cut(s) 742
BglII AGATCT 2 cut(s) 599, 670
BisI GCNGC 9 cut(s) 114, 147, 383, 462, 618, 639, 642, 964, 1050
BlsI GCNGC 9 cut(s) 115, 148, 384, 463, 619, 640, 643, 965, 1051
Bme1390I CCNGG 3 cut(s) 482, 549, 891
Bme18I GGWCC 1 cut(s) 491
BmgBI CACGTC 1 cut(s) 302
BmgT120I GGNCC 2 cut(s) 111, 491
BmiI GGNNCC 5 cut(s) 131, 159, 330, 422, 493
BmrFI CCNGG 3 cut(s) 482, 549, 891
BmrI ACTGGG 1 cut(s) 849
BmsI GCATC 3 cut(s) 102, 402, 1047
BmuI ACTGGG 1 cut(s) 849
BpiI GAAGAC 1 cut(s) 999
BpmI CTGGAG 2 cut(s) 614, 891
BpuMI CCSGG 1 cut(s) 482
BsaHI GRCGYC 1 cut(s) 130
BsaI GGTCTC 2 cut(s) 770, 874
BsaJI CCNNGG 4 cut(s) 59, 424, 480, 548
Bsc4I CCNNNNNNNGG 6 cut(s) 61, 109, 125, 488, 869, 890
Bse1I ACTGG 4 cut(s) 254, 500, 597, 855
Bse3DI GCAATG 1 cut(s) 189
BseBI CCWGG 2 cut(s) 549, 891
BseDI CCNNGG 4 cut(s) 59, 424, 480, 548
BseGI GGATG 3 cut(s) 223, 296, 886
BseLI CCNNNNNNNGG 6 cut(s) 61, 109, 125, 488, 869, 890
BseMI GCAATG 1 cut(s) 189
BseNI ACTGG 4 cut(s) 254, 500, 597, 855
BseRI GAGGAG 1 cut(s) 19
BseSI GKGCMC 2 cut(s) 634, 898
BseXI GCAGC 6 cut(s) 394, 448, 650, 653, 950, 1061
BseYI CCCAGC 1 cut(s) 318
BshFI GGCC 3 cut(s) 102, 113, 620
BshNI GGYRCC 3 cut(s) 129, 328, 420
BsiHKAI GWGCWC 3 cut(s) 634, 898, 1073
BsiSI CCGG 2 cut(s) 103, 482
BslFI GGGAC 3 cut(s) 477, 554, 810
BslI CCNNNNNNNGG 6 cut(s) 61, 109, 125, 488, 869, 890
BsmAI GTCTC 3 cut(s) 614, 770, 874
BsmFI GGGAC 3 cut(s) 477, 554, 810
BsmI GAATGC 1 cut(s) 13
BsnI GGCC 3 cut(s) 102, 113, 620
Bso31I GGTCTC 2 cut(s) 770, 874
Bsp1286I GDGCHC 3 cut(s) 634, 898, 1073
Bsp143I GATC 4 cut(s) 229, 529, 599, 670
Bsp19I CCATGG 1 cut(s) 59
BspACI CCGC 4 cut(s) 114, 147, 617, 850
BspANI GGCC 3 cut(s) 102, 113, 620
BspLI GGNNCC 5 cut(s) 131, 159, 330, 422, 493
BspPI GGATC 1 cut(s) 524
BspT107I GGYRCC 3 cut(s) 129, 328, 420
BspTI CTTAAG 1 cut(s) 769
BspTNI GGTCTC 2 cut(s) 770, 874
BsrBI CCGCTC 1 cut(s) 116
BsrDI GCAATG 1 cut(s) 189
BsrI ACTGG 4 cut(s) 254, 500, 597, 855
BssECI CCNNGG 4 cut(s) 59, 424, 480, 548
BssMI GATC 4 cut(s) 229, 529, 599, 670
BssNI GRCGYC 1 cut(s) 130
BssSI CACGAG 1 cut(s) 633
BssT1I CCWWGG 2 cut(s) 59, 424
Bst2BI CACGAG 1 cut(s) 633
Bst2UI CCWGG 2 cut(s) 549, 891
Bst4CI ACNGT 1 cut(s) 651
Bst6I CTCTTC 1 cut(s) 738
BstACI GRCGYC 1 cut(s) 130
BstAFI CTTAAG 1 cut(s) 769
BstC8I GCNNGC 2 cut(s) 316, 380
BstDEI CTNAG 1 cut(s) 903
BstDSI CCRYGG 1 cut(s) 59
BstENI CCTNNNNNAGG 1 cut(s) 123
BstF5I GGATG 3 cut(s) 223, 296, 886
BstH2I RGCGCY 1 cut(s) 133
BstHHI GCGC 2 cut(s) 93, 132
BstKTI GATC 4 cut(s) 232, 532, 602, 673
BstMAI GTCTC 3 cut(s) 614, 770, 874
BstMBI GATC 4 cut(s) 229, 529, 599, 670
BstMWI GCNNNNNNNGC 4 cut(s) 99, 379, 623, 638
BstNI CCWGG 2 cut(s) 549, 891
BstNSI RCATGY 1 cut(s) 318
BstSCI CCNGG 3 cut(s) 480, 547, 889
BstSFI CTRYAG 1 cut(s) 196
BstSLI GKGCMC 2 cut(s) 634, 898
BstV1I GCAGC 6 cut(s) 394, 448, 650, 653, 950, 1061
BstV2I GAAGAC 1 cut(s) 999
BstX2I RGATCY 3 cut(s) 529, 599, 670
BstYI RGATCY 3 cut(s) 529, 599, 670
BsuI GTATCC 1 cut(s) 742
BsuRI GGCC 3 cut(s) 102, 113, 620
BtgI CCRYGG 1 cut(s) 59
BtrI CACGTC 1 cut(s) 302
BtsCI GGATG 3 cut(s) 223, 296, 886
BtsI GCAGTG 1 cut(s) 219
BtsIMutI CAGTG 1 cut(s) 219
Cac8I GCNNGC 2 cut(s) 316, 380
CfoI GCGC 2 cut(s) 93, 132
Cfr13I GGNCC 2 cut(s) 111, 491
Csp6I GTAC 2 cut(s) 329, 421
CspCI CAANNNNNGTGG 2 cut(s) 375, 410
CviAII CATG 6 cut(s) 39, 60, 108, 143, 315, 1074
CviQI GTAC 2 cut(s) 329, 421
DdeI CTNAG 1 cut(s) 903
DinI GGCGCC 1 cut(s) 131
DpnI GATC 4 cut(s) 231, 531, 601, 672
DpnII GATC 4 cut(s) 229, 529, 599, 670
EaeI YGGCCR 1 cut(s) 618
Eam1104I CTCTTC 1 cut(s) 738
EarI CTCTTC 1 cut(s) 738
Eco130I CCWWGG 2 cut(s) 59, 424
Eco31I GGTCTC 2 cut(s) 770, 874
Eco47I GGWCC 1 cut(s) 491
Eco57I CTGAAG 1 cut(s) 354
EcoNI CCTNNNNNAGG 1 cut(s) 123
EcoO109I RGGNCCY 1 cut(s) 491
EcoRI GAATTC 1 cut(s) 1010
EcoRII CCWGG 2 cut(s) 547, 889
EcoT14I CCWWGG 2 cut(s) 59, 424
EcoT22I ATGCAT 1 cut(s) 1040
EgeI GGCGCC 1 cut(s) 131
EheI GGCGCC 1 cut(s) 131
ErhI CCWWGG 2 cut(s) 59, 424
FaeI CATG 6 cut(s) 42, 63, 111, 146, 318, 1077
FalI AAGNNNNNCTT 2 cut(s) 480, 512
FaqI GGGAC 3 cut(s) 477, 554, 810
FatI CATG 6 cut(s) 38, 59, 107, 142, 314, 1073
FauI CCCGC 1 cut(s) 857
Fnu4HI GCNGC 9 cut(s) 114, 147, 383, 462, 618, 639, 642, 964, 1050
FokI GGATG 3 cut(s) 230, 303, 873
Fsp4HI GCNGC 9 cut(s) 114, 147, 383, 462, 618, 639, 642, 964, 1050
FspBI CTAG 4 cut(s) 150, 311, 579, 1061
GlaI GCGC 2 cut(s) 92, 131
GluI GCNGC 9 cut(s) 114, 147, 383, 462, 618, 639, 642, 964, 1050
GsaI CCCAGC 1 cut(s) 322
GsuI CTGGAG 2 cut(s) 614, 891
HaeII RGCGCY 1 cut(s) 133
HaeIII GGCC 3 cut(s) 102, 113, 620
HapII CCGG 2 cut(s) 103, 482
HhaI GCGC 2 cut(s) 93, 132
Hin1I GRCGYC 1 cut(s) 130
Hin1II CATG 6 cut(s) 42, 63, 111, 146, 318, 1077
Hin6I GCGC 2 cut(s) 91, 130
HinP1I GCGC 2 cut(s) 91, 130
HincII GTYRAC 1 cut(s) 860
HindII GTYRAC 1 cut(s) 860
HinfI GANTC 3 cut(s) 139, 222, 734
HpaII CCGG 2 cut(s) 103, 482
HphI GGTGA 3 cut(s) 352, 838, 1049
Hpy166II GTNNAC 3 cut(s) 632, 860, 896
Hpy188I TCNGA 1 cut(s) 589
Hpy188III TCNNGA 6 cut(s) 161, 242, 261, 668, 674, 870
Hpy8I GTNNAC 3 cut(s) 632, 860, 896
HpyAV CCTTC 6 cut(s) 92, 329, 482, 506, 873, 909
HpyCH4III ACNGT 1 cut(s) 651
HpyCH4IV ACGT 1 cut(s) 301
HpyCH4V TGCA 7 cut(s) 52, 212, 563, 632, 896, 966, 1038
HpyF10VI GCNNNNNNNGC 4 cut(s) 99, 379, 623, 638
HpyF3I CTNAG 1 cut(s) 903
HpySE526I ACGT 1 cut(s) 301
Hsp92I GRCGYC 1 cut(s) 130
Hsp92II CATG 6 cut(s) 42, 63, 111, 146, 318, 1077
HspAI GCGC 2 cut(s) 91, 130
KasI GGCGCC 1 cut(s) 129
KpnI GGTACC 2 cut(s) 332, 424
Kzo9I GATC 4 cut(s) 229, 529, 599, 670
LmnI GCTCC 2 cut(s) 121, 1068
Lsp1109I GCAGC 6 cut(s) 394, 448, 650, 653, 950, 1061
LweI GCATC 3 cut(s) 102, 402, 1047
MaeI CTAG 4 cut(s) 150, 311, 579, 1061
MaeII ACGT 1 cut(s) 301
MalI GATC 4 cut(s) 231, 531, 601, 672
MbiI CCGCTC 1 cut(s) 116
MboI GATC 4 cut(s) 229, 529, 599, 670
MboII GAAGA 7 cut(s) 9, 317, 460, 594, 755, 858, 1004
MflI RGATCY 3 cut(s) 529, 599, 670
MhlI GDGCHC 3 cut(s) 634, 898, 1073
MluCI AATT 7 cut(s) 25, 204, 236, 392, 399, 506, 1010
Mly113I GGCGCC 1 cut(s) 130
MmeI TCCRAC 1 cut(s) 268
Mph1103I ATGCAT 1 cut(s) 1040
MseI TTAA 7 cut(s) 234, 398, 725, 770, 797, 831, 942
MslI CAYNNNNRTG 1 cut(s) 891
MspA1I CMGCKG 1 cut(s) 617
MspCI CTTAAG 1 cut(s) 769
MspI CCGG 2 cut(s) 103, 482
MspR9I CCNGG 3 cut(s) 482, 549, 891
Mva1269I GAATGC 1 cut(s) 13
MvaI CCWGG 2 cut(s) 549, 891
MwoI GCNNNNNNNGC 4 cut(s) 99, 379, 623, 638
NarI GGCGCC 1 cut(s) 130
NciI CCSGG 1 cut(s) 482
NcoI CCATGG 1 cut(s) 59
NdeII GATC 4 cut(s) 229, 529, 599, 670
NlaIII CATG 6 cut(s) 42, 63, 111, 146, 318, 1077
NlaIV GGNNCC 5 cut(s) 131, 159, 330, 422, 493
NsiI ATGCAT 1 cut(s) 1040
NspI RCATGY 1 cut(s) 318
PaeI GCATGC 1 cut(s) 318
PctI GAATGC 1 cut(s) 13
PfeI GAWTC 3 cut(s) 139, 222, 734
PkrI GCNGC 9 cut(s) 115, 148, 384, 463, 619, 640, 643, 965, 1051
PluTI GGCGCC 1 cut(s) 133
PpuMI RGGWCCY 1 cut(s) 491
PsiI TTATAA 1 cut(s) 435
Psp5II RGGWCCY 1 cut(s) 491
Psp6I CCWGG 2 cut(s) 547, 889
PspFI CCCAGC 1 cut(s) 318
PspGI CCWGG 2 cut(s) 547, 889
PspN4I GGNNCC 5 cut(s) 131, 159, 330, 422, 493
PspPI GGNCC 2 cut(s) 111, 491
PspPPI RGGWCCY 1 cut(s) 491
PsuI RGATCY 3 cut(s) 529, 599, 670
RsaI GTAC 2 cut(s) 330, 422
RsaNI GTAC 2 cut(s) 329, 421
RseI CAYNNNNRTG 1 cut(s) 891
SaqAI TTAA 7 cut(s) 234, 398, 725, 770, 797, 831, 942
SatI GCNGC 9 cut(s) 114, 147, 383, 462, 618, 639, 642, 964, 1050
Sau3AI GATC 4 cut(s) 229, 529, 599, 670
Sau96I GGNCC 2 cut(s) 111, 491
ScrFI CCNGG 3 cut(s) 482, 549, 891
SduI GDGCHC 3 cut(s) 634, 898, 1073
SfaNI GCATC 3 cut(s) 102, 402, 1047
SfcI CTRYAG 1 cut(s) 196
SfoI GGCGCC 1 cut(s) 131
SinI GGWCC 1 cut(s) 491
SmiMI CAYNNNNRTG 1 cut(s) 891
SmlI CTYRAG 1 cut(s) 769
SmoI CTYRAG 1 cut(s) 769
SphI GCATGC 1 cut(s) 318
Sse9I AATT 7 cut(s) 25, 204, 236, 392, 399, 506, 1010
SsiI CCGC 4 cut(s) 114, 147, 617, 850
SspDI GGCGCC 1 cut(s) 129
SspMI CTAG 4 cut(s) 150, 311, 579, 1061
StyD4I CCNGG 3 cut(s) 480, 547, 889
StyI CCWWGG 2 cut(s) 59, 424
TaaI ACNGT 1 cut(s) 651
TaiI ACGT 1 cut(s) 304
TaqI TCGA 1 cut(s) 96
TasI AATT 7 cut(s) 25, 204, 236, 392, 399, 506, 1010
TauI GCSGC 3 cut(s) 116, 149, 620
TfiI GAWTC 3 cut(s) 139, 222, 734
Tru1I TTAA 7 cut(s) 234, 398, 725, 770, 797, 831, 942
Tru9I TTAA 7 cut(s) 234, 398, 725, 770, 797, 831, 942
TscAI CASTG 1 cut(s) 219
TseI GCWGC 6 cut(s) 382, 461, 638, 641, 963, 1049
TspDTI ATGAA 2 cut(s) 131, 471
TspGWI ACGGA 1 cut(s) 393
TspRI CASTG 1 cut(s) 219
Vha464I CTTAAG 1 cut(s) 769
VneI GTGCAC 2 cut(s) 630, 894
VpaK11BI GGWCC 1 cut(s) 491
XagI CCTNNNNNAGG 1 cut(s) 123
XapI RAATTY 4 cut(s) 204, 236, 506, 1010
XceI RCATGY 1 cut(s) 318
XspI CTAG 4 cut(s) 150, 311, 579, 1061
Zsp2I ATGCAT 1 cut(s) 1040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.