Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002785

Physical Location & Seq

Genomic Coordinates Forward (+)

1461475 .. 1464885

Gene Structure 3411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G011000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 864 bp

ATGACAATGGAGACTGCGAGGTTGGTGGAGCAGGGAAGAGATCACAAGGTTGTTTCGCGTGTCGGGCACGCTAGCAAGGTTGGGTATCATGTGAGCAAGGCCATAACGAAGAGAAAATGCGGCAAGAAGATCAAGCATTCGGTGCCACCAACGGTACTGCAACAGCTCTTTGTTTCGTGTAGACAAGTTTTCAAAGGCCCTGGAACTGTTCCTTCGCCTCATGATGTACACAACTTGTGTAGCATTCTTGATAAGATGAGACCAGAAGATGTTGGGCTTAGTAGGGATCTGCAGTTCTTCAAGCCTAAAACTGTGGTCCAAGGGACTCCTAGGGTCACATATACAACAATATATGAGTGCAGTAATTTTTCGTTGTGCTGCTTGTTTATTCCAGCAACTGGTGTTATCCCACTCCATAACCATCCAGAAATGACTGTTTTCAGTAAGCTTCTATTAGGCAAGATGCATATTAAATCATATGATTGGGTTGATCCCGTCAATTCAGATGGCTCCACACCAGCCCCTCAATTGAGACTGGCAAAGTTGAAAGCTGATAGCGTCTTCACGTCCCCTTGCAATACATCTGTTCTATATCCAACAGAAGGTGGTAACATCCATGCCTTCACAGCCATTACCCCATGTGCTGTGCTGGATGTGCTTGGACCTCCTTACTCTAAAGAAGATGACCGGGACTGCTCATATTACAAAGATCATCCCTATGCTGCTTATTCAAATGGAGAGGCATCAGTAACTGAAGGGAATGGTGATTGTTATGGGTGGTTGGAAGAGATTGAAATGCCTGAGAACTCAGAAATGGATAAAATTCCGTACTTAGGACCACAAGTTACTGAGACGAGTTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0008152 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00430 ko01100 map00430 map01100

Pfam Domains

Protein Families

PCO_ADO

Protein Analysis

288

Amino Acids

31.76

Weight (kDa)

6.82

Isoelectric Point (pI)

43.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002785)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15120 AT5G39890 AT5G39890
fragaria_vesca	FvH4_6g18200 FvH4_6g49150 FvH4_6g49150 FvH4_6g49150 FvH4_6g49150
malus_domestica	MD09G1048100.v1.1 MD12G1009100.v1.1 MD12G1009200.v1.1 MD14G1006600.v1.1 MD17G1048300.v1.1
prunus_persica	Prupe.3G270900_v2.0.a1 Prupe.7G011000_v2.0.a1
pyrus_communis	pycom111g03900 pycom14g00520 pycom17g04300
rosa_chinensis	RchiOBHm_Chr2g0169021 RchiOBHm_Chr3g0496281
rosa_laevigata	RLG00000021824 RLG00000022538
rosa_multiflora	Rmu_ssc0000393.1_g000023 Rmu_ssc0000454.1_g000014
rosa_roxburghii	Rroxscaffold_2G00082530 Rroxscaffold_6G00389280
rosa_rugosa	Rorug02G0536500 Rorug02G0536500 Rorug03G0281500
rosa_samantha	Rh2AG607800 Rh2BG620300 Rh2CG589400 Rh2DG631100 Rh3AG328200 Rh3BG364400 Rh3CG361200 Rh3DG364400
rosa_wichuraiana	Rw2G050400 Rw3G028740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	142
AccB7I	CCANNNNNTGG	1 cut(s)	398
AccI	GTMKAC	1 cut(s)	181
AccII	CGCG	1 cut(s)	58
AciI	CCGC	1 cut(s)	120
AclWI	GGATC	2 cut(s)	294, 485
AcsI	RAATTY	1 cut(s)	822
AcuI	CTGAAG	1 cut(s)	774
AfaI	GTAC	3 cut(s)	156, 228, 830
AfiI	CCNNNNNNNGG	3 cut(s)	398, 602, 833
AgsI	TTSAA	5 cut(s)	193, 301, 547, 732, 794
AjiI	CACGTC	1 cut(s)	567
AjnI	CCWGG	1 cut(s)	199
AloI	GAACNNNNNNTCC	2 cut(s)	278, 310
AluBI	AGCT	3 cut(s)	166, 448, 551
AluI	AGCT	3 cut(s)	166, 448, 551
Alw26I	GTCTC	4 cut(s)	5, 253, 526, 845
AlwI	GGATC	2 cut(s)	294, 485
AlwNI	CAGNNNCTG	2 cut(s)	398, 752
AoxI	GGCC	2 cut(s)	99, 196
ApeKI	GCWGC	2 cut(s)	378, 722
ApoI	RAATTY	1 cut(s)	822
AspA2I	CCTAGG	1 cut(s)	329
AspS9I	GGNCC	4 cut(s)	197, 316, 662, 836
AsuC2I	CCSGG	1 cut(s)	689
AsuHPI	GGTGA	1 cut(s)	776
AsuNHI	GCTAGC	1 cut(s)	71
AvaII	GGWCC	3 cut(s)	316, 662, 836
AvrII	CCTAGG	1 cut(s)	329
BaeGI	GKGCMC	1 cut(s)	69
BanI	GGYRCC	1 cut(s)	142
BbsI	GAAGAC	1 cut(s)	553
BbvI	GCAGC	2 cut(s)	365, 709
BccI	CCATC	2 cut(s)	429, 500
BciT130I	CCWGG	1 cut(s)	201
BcnI	CCSGG	1 cut(s)	689
BcoDI	GTCTC	4 cut(s)	5, 253, 526, 845
BfaI	CTAG	3 cut(s)	72, 330, 862
BfmI	CTRYAG	1 cut(s)	290
BisI	GCNGC	3 cut(s)	121, 379, 723
BlnI	CCTAGG	1 cut(s)	329
BlsI	GCNGC	3 cut(s)	122, 380, 724
Bme1390I	CCNGG	2 cut(s)	201, 689
Bme18I	GGWCC	3 cut(s)	316, 662, 836
BmgBI	CACGTC	1 cut(s)	567
BmgT120I	GGNCC	4 cut(s)	197, 316, 662, 836
BmiI	GGNNCC	2 cut(s)	144, 511
BmrFI	CCNGG	2 cut(s)	201, 689
BmsI	GCATC	2 cut(s)	453, 752
BmtI	GCTAGC	1 cut(s)	75
BpiI	GAAGAC	1 cut(s)	553
BpuMI	CCSGG	1 cut(s)	689
BsaI	GGTCTC	1 cut(s)	253
BsaJI	CCNNGG	3 cut(s)	199, 319, 329
Bsc4I	CCNNNNNNNGG	3 cut(s)	398, 602, 833
Bse1I	ACTGG	2 cut(s)	403, 540
BseBI	CCWGG	1 cut(s)	201
BseDI	CCNNGG	3 cut(s)	199, 319, 329
BseGI	GGATG	4 cut(s)	421, 612, 658, 712
BseLI	CCNNNNNNNGG	3 cut(s)	398, 602, 833
BseMII	CTCAG	3 cut(s)	792, 822, 840
BseNI	ACTGG	2 cut(s)	403, 540
BseSI	GKGCMC	1 cut(s)	69
BseXI	GCAGC	2 cut(s)	365, 709
BsgI	GTGCAG	1 cut(s)	379
Bsh1236I	CGCG	1 cut(s)	58
BshFI	GGCC	2 cut(s)	101, 198
BshNI	GGYRCC	1 cut(s)	142
BsiSI	CCGG	1 cut(s)	688
BslFI	GGGAC	3 cut(s)	337, 553, 704
BslI	CCNNNNNNNGG	3 cut(s)	398, 602, 833
BsmAI	GTCTC	4 cut(s)	5, 253, 526, 845
BsmBI	CGTCTC	1 cut(s)	845
BsmFI	GGGAC	3 cut(s)	337, 553, 704
BsmI	GAATGC	2 cut(s)	136, 243
BsnI	GGCC	2 cut(s)	101, 198
Bso31I	GGTCTC	1 cut(s)	253
Bsp1286I	GDGCHC	1 cut(s)	69
Bsp1407I	TGTACA	1 cut(s)	226
Bsp143I	GATC	5 cut(s)	40, 129, 286, 490, 709
BspACI	CCGC	1 cut(s)	120
BspANI	GGCC	2 cut(s)	101, 198
BspCNI	CTCAG	3 cut(s)	793, 821, 841
BspFNI	CGCG	1 cut(s)	58
BspHI	TCATGA	1 cut(s)	220
BspLI	GGNNCC	2 cut(s)	144, 511
BspMAI	CTGCAG	1 cut(s)	294
BspOI	GCTAGC	1 cut(s)	75
BspPI	GGATC	2 cut(s)	294, 485
BspT107I	GGYRCC	1 cut(s)	142
BspTNI	GGTCTC	1 cut(s)	253
BsrGI	TGTACA	1 cut(s)	226
BsrI	ACTGG	2 cut(s)	403, 540
BssECI	CCNNGG	3 cut(s)	199, 319, 329
BssMI	GATC	5 cut(s)	40, 129, 286, 490, 709
BssT1I	CCWWGG	2 cut(s)	319, 329
Bst2UI	CCWGG	1 cut(s)	201
Bst4CI	ACNGT	4 cut(s)	154, 208, 313, 436
Bst6I	CTCTTC	3 cut(s)	31, 104, 780
BstAPI	GCANNNNNTGC	1 cut(s)	142
BstAUI	TGTACA	1 cut(s)	226
BstC8I	GCNNGC	2 cut(s)	69, 73
BstDEI	CTNAG	5 cut(s)	278, 801, 808, 832, 849
BstF5I	GGATG	4 cut(s)	421, 612, 658, 712
BstFNI	CGCG	1 cut(s)	58
BstKTI	GATC	5 cut(s)	43, 132, 289, 493, 712
BstMAI	GTCTC	4 cut(s)	5, 253, 526, 845
BstMBI	GATC	5 cut(s)	40, 129, 286, 490, 709
BstMWI	GCNNNNNNNGC	4 cut(s)	64, 142, 626, 655
BstNI	CCWGG	1 cut(s)	201
BstSCI	CCNGG	2 cut(s)	199, 687
BstSFI	CTRYAG	1 cut(s)	290
BstSLI	GKGCMC	1 cut(s)	69
BstUI	CGCG	1 cut(s)	58
BstV1I	GCAGC	2 cut(s)	365, 709
BstV2I	GAAGAC	1 cut(s)	553
BstX2I	RGATCY	1 cut(s)	286
BstYI	RGATCY	1 cut(s)	286
BsuRI	GGCC	2 cut(s)	101, 198
BtrI	CACGTC	1 cut(s)	567
BtsCI	GGATG	4 cut(s)	421, 612, 658, 712
Cac8I	GCNNGC	2 cut(s)	69, 73
CaiI	CAGNNNCTG	2 cut(s)	398, 752
CciI	TCATGA	1 cut(s)	220
Cfr13I	GGNCC	4 cut(s)	197, 316, 662, 836
CseI	GACGC	1 cut(s)	547
Csp6I	GTAC	3 cut(s)	155, 227, 829
CviAII	CATG	4 cut(s)	89, 221, 617, 639
CviQI	GTAC	3 cut(s)	155, 227, 829
DdeI	CTNAG	5 cut(s)	278, 801, 808, 832, 849
DpnI	GATC	5 cut(s)	42, 131, 288, 492, 711
DpnII	GATC	5 cut(s)	40, 129, 286, 490, 709
Eam1104I	CTCTTC	3 cut(s)	31, 104, 780
EarI	CTCTTC	3 cut(s)	31, 104, 780
Eco130I	CCWWGG	2 cut(s)	319, 329
Eco31I	GGTCTC	1 cut(s)	253
Eco47I	GGWCC	3 cut(s)	316, 662, 836
Eco57I	CTGAAG	1 cut(s)	774
EcoO109I	RGGNCCY	1 cut(s)	197
EcoRII	CCWGG	1 cut(s)	199
EcoT14I	CCWWGG	2 cut(s)	319, 329
EcoT22I	ATGCAT	1 cut(s)	468
ErhI	CCWWGG	2 cut(s)	319, 329
Esp3I	CGTCTC	1 cut(s)	845
FaeI	CATG	4 cut(s)	92, 224, 620, 642
FaqI	GGGAC	3 cut(s)	337, 553, 704
FatI	CATG	4 cut(s)	88, 220, 616, 638
FauNDI	CATATG	1 cut(s)	478
FblI	GTMKAC	1 cut(s)	181
Fnu4HI	GCNGC	3 cut(s)	121, 379, 723
FokI	GGATG	4 cut(s)	408, 599, 665, 699
Fsp4HI	GCNGC	3 cut(s)	121, 379, 723
FspBI	CTAG	3 cut(s)	72, 330, 862
GluI	GCNGC	3 cut(s)	121, 379, 723
HaeIII	GGCC	2 cut(s)	101, 198
HapII	CCGG	1 cut(s)	688
HgaI	GACGC	1 cut(s)	547
Hin1II	CATG	4 cut(s)	92, 224, 620, 642
HindIII	AAGCTT	1 cut(s)	446
HinfI	GANTC	1 cut(s)	325
HpaII	CCGG	1 cut(s)	688
HphI	GGTGA	1 cut(s)	776
Hpy166II	GTNNAC	2 cut(s)	182, 229
Hpy188I	TCNGA	2 cut(s)	505, 811
Hpy188III	TCNNGA	3 cut(s)	221, 248, 425
Hpy8I	GTNNAC	2 cut(s)	182, 229
HpyAV	CCTTC	4 cut(s)	222, 596, 631, 749
HpyCH4III	ACNGT	4 cut(s)	154, 208, 313, 436
HpyCH4IV	ACGT	1 cut(s)	566
HpyCH4V	TGCA	5 cut(s)	160, 292, 360, 466, 576
HpyF10VI	GCNNNNNNNGC	4 cut(s)	64, 142, 626, 655
HpyF3I	CTNAG	5 cut(s)	278, 801, 808, 832, 849
HpySE526I	ACGT	1 cut(s)	566
Hsp92II	CATG	4 cut(s)	92, 224, 620, 642
Kzo9I	GATC	5 cut(s)	40, 129, 286, 490, 709
LmnI	GCTCC	2 cut(s)	28, 515
Lsp1109I	GCAGC	2 cut(s)	365, 709
LweI	GCATC	2 cut(s)	453, 752
MaeI	CTAG	3 cut(s)	72, 330, 862
MaeII	ACGT	1 cut(s)	566
MaeIII	GTNAC	4 cut(s)	334, 608, 748, 844
MalI	GATC	5 cut(s)	42, 131, 288, 492, 711
MboI	GATC	5 cut(s)	40, 129, 286, 490, 709
MboII	GAAGA	8 cut(s)	48, 121, 139, 278, 289, 553, 692, 797
MfeI	CAATTG	1 cut(s)	527
MflI	RGATCY	1 cut(s)	286
MhlI	GDGCHC	1 cut(s)	69
MluCI	AATT	4 cut(s)	364, 499, 527, 822
MlyI	GAGTC	1 cut(s)	319
MmeI	TCCRAC	2 cut(s)	620, 762
MnlI	CCTC	5 cut(s)	12, 228, 534, 675, 733
Mph1103I	ATGCAT	1 cut(s)	468
MseI	TTAA	1 cut(s)	471
MslI	CAYNNNNRTG	1 cut(s)	717
MspI	CCGG	1 cut(s)	688
MspR9I	CCNGG	2 cut(s)	201, 689
MunI	CAATTG	1 cut(s)	527
Mva1269I	GAATGC	2 cut(s)	136, 243
MvaI	CCWGG	1 cut(s)	201
MvnI	CGCG	1 cut(s)	58
MwoI	GCNNNNNNNGC	4 cut(s)	64, 142, 626, 655
NciI	CCSGG	1 cut(s)	689
NdeI	CATATG	1 cut(s)	478
NdeII	GATC	5 cut(s)	40, 129, 286, 490, 709
NheI	GCTAGC	1 cut(s)	71
NlaIII	CATG	4 cut(s)	92, 224, 620, 642
NlaIV	GGNNCC	2 cut(s)	144, 511
NmuCI	GTSAC	1 cut(s)	334
NsiI	ATGCAT	1 cut(s)	468
PagI	TCATGA	1 cut(s)	220
PctI	GAATGC	2 cut(s)	136, 243
PflMI	CCANNNNNTGG	1 cut(s)	398
PkrI	GCNGC	3 cut(s)	122, 380, 724
PleI	GAGTC	1 cut(s)	319
PpsI	GAGTC	1 cut(s)	319
Psp6I	CCWGG	1 cut(s)	199
PspGI	CCWGG	1 cut(s)	199
PspN4I	GGNNCC	2 cut(s)	144, 511
PspPI	GGNCC	4 cut(s)	197, 316, 662, 836
PstI	CTGCAG	1 cut(s)	294
PstNI	CAGNNNCTG	2 cut(s)	398, 752
PsuI	RGATCY	1 cut(s)	286
RsaI	GTAC	3 cut(s)	156, 228, 830
RsaNI	GTAC	3 cut(s)	155, 227, 829
RseI	CAYNNNNRTG	1 cut(s)	717
SaqAI	TTAA	1 cut(s)	471
SatI	GCNGC	3 cut(s)	121, 379, 723
Sau3AI	GATC	5 cut(s)	40, 129, 286, 490, 709
Sau96I	GGNCC	4 cut(s)	197, 316, 662, 836
SchI	GAGTC	1 cut(s)	319
ScrFI	CCNGG	2 cut(s)	201, 689
SduI	GDGCHC	1 cut(s)	69
SetI	ASST	9 cut(s)	23, 51, 81, 168, 450, 553, 569, 607, 667
SfaNI	GCATC	2 cut(s)	453, 752
SfcI	CTRYAG	1 cut(s)	290
SinI	GGWCC	3 cut(s)	316, 662, 836
SmiMI	CAYNNNNRTG	1 cut(s)	717
Sse9I	AATT	4 cut(s)	364, 499, 527, 822
SsiI	CCGC	1 cut(s)	120
SspMI	CTAG	3 cut(s)	72, 330, 862
StyD4I	CCNGG	2 cut(s)	199, 687
StyI	CCWWGG	2 cut(s)	319, 329
TaaI	ACNGT	4 cut(s)	154, 208, 313, 436
TaiI	ACGT	1 cut(s)	569
TasI	AATT	4 cut(s)	364, 499, 527, 822
TatI	WGTACW	1 cut(s)	226
TauI	GCSGC	1 cut(s)	123
Tru1I	TTAA	1 cut(s)	471
Tru9I	TTAA	1 cut(s)	471
TseFI	GTSAC	1 cut(s)	334
TseI	GCWGC	2 cut(s)	378, 722
Tsp45I	GTSAC	1 cut(s)	334
TspGWI	ACGGA	1 cut(s)	816
Van91I	CCANNNNNTGG	1 cut(s)	398
VpaK11BI	GGWCC	3 cut(s)	316, 662, 836
XapI	RAATTY	1 cut(s)	822
XmaJI	CCTAGG	1 cut(s)	329
XmiI	GTMKAC	1 cut(s)	181
XspI	CTAG	3 cut(s)	72, 330, 862
Zsp2I	ATGCAT	1 cut(s)	468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.