Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0003384

Physical Location & Seq

Genomic Coordinates Forward (+)

13114498 .. 13116204

Gene Structure 1707 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGGGTACTTGGGGGTATAATATTTGCATTCATGCGTTTGGGTGTTGGGGTGATTTGGGTACTAGTCTGAGTCTGTTCAGAGGGATGAAGACTCTAACTTGGATTATGTCGGGCCGGATTTGTCTACATATGATAGCCTCGTTCATGGGCTCTGAATTGAAGAGCTCCGGCCATGAGCCGGACGCAATTACGCAATTACCTATAGAATTCTCTTATTCAGGGGTGTTTGAAATGCAGCTTAATGGATATATCCCGGATACCATTGTTTATAATTCTCTACTAGATGGGTTATTCAAGGCTAGGAAGGTTGATGGCTGCCAGTTGTTTGAGAAAATGGTTCAGAATGGGGTGAGAGCCTTGAGGTGGCCGTATAATATTCTCATGGATGGTTTGTTCAGGAATGGAAGGGCAGAGGCTGCGTGCACACTATTTTGTGACTTAAAGAAGAAGGGTCAGTTTGTTGATGGTGTAACATATAGCATTGTGGTTTTGCAACTTTGTAAGGACAGTCTGCTTGAGGAAGCACTAGGATTGGTGGAAGAAAAGGAAAGGAGAGGCTTTACTGTTAATTTAATTACTGTATTGTCACTTGTGATTGGGCTGTATAAAGAAGGTCGGTGGGATTGGACGGACAAGCTCATGAAGCACATTAGAGATGGTAACCTAGTGCCGAGTGTTCTTAAATGGAAGGTTGATATGGAGGCTTCACTGAAAAATCTGCAGAGAAATAGAAAGGATATTACACCATTGTTCCCAATTAAAGGCGACTTGAGCGAGATTATGAGTTTAATAAAGTCTGCTGAATCAACAATGGATGCAGACCTAGATTCAGAGGCTGCCAGGGTTAAAGAAGATGATAAGAATTTGTCCACCGATACTGATCAGTGGTCATCATCTCCACATATGGATCAATTGGCTAATCAACTTAAGTCTACCAACCACTCCTCGCAGCTGTTTTCATTGTCCAGGGGGCAAAGAGTTCAAGCGAATGGGGAAAGCACTTTTGATATTGACATGGTTAATACCTTTTTGTCCTTATTCTTGGCCAAGGGAAAGCTGAGAATAGCATGCAAATTGTTTGAGATTTTCAGTGATCTTGGTGCAAACCCCATGAGTTATACTTATAATTCTATGATGAGTTCGTTCGTCAAGAAGGGCTACTTCAATGAGGCATGGGGTGTACTCAATGAAATGGGAGAAAAGGTCTGCCCCACAGACATGGCTACATACAATGTGATAATTCAAGGCTTGGGGAAGTTGGGTAGAGCGGATCTAGGGAGTTCTGTCCTGGATAAGCTAATTAAGCAGGGTGGTTATCTTGACGTGGTTATGTACAACACCTTGATTAATGCACTAGGGAAGGCTAGCAGGATTGCTGAAGTAAACAAGCTCTTTGAGCAGATGAAGAGTAGTGGAATAAATCCTGATGTTGTCACTGTTAATACACTTATTGAAGTTCATAGCAAAGCAGGTCGGCTAAAAGATGCATATAAGTTTTTGAAAATGATACTCGATGCAGGCTGCACCCCGAACCATGTTACTGACACAACTTTAGATTTTCTTGGCAAGGAGATTGAGAAAATGAGGTACCAGAAGGCATCCATGGTGCGCAATAAGGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

542

Amino Acids

60.62

Weight (kDa)

7.06

Isoelectric Point (pI)

30.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	124 - 168	1.1e-10	PPR repeat family
PPR_2	PF13041	372 - 419	8.4e-13	PPR repeat family
PPR	PF01535	373 - 401	1.6e-06	PPR repeat
TPR_24	PF23276	419 - 502	7.8e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	428 - 486	4.8e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	441 - 484	1.6e-13	PPR repeat family
PPR	PF01535	443 - 473	7.9e-07	PPR repeat
PPR_3	PF13812	463 - 514	1.5e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	472 - 501	1.3e-07	PPR repeat
PPR_2	PF13041	475 - 518	2e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003384)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01570
fragaria_vesca	FvH4_7g18170
malus_domestica	MD01G1095900.v1.1 MD01G1096200.v1.1 MD01G1096300.v1.1 MD01G1097600.v1.1 MD01G1131700.v1.1
prunus_persica	Prupe.2G203600_v2.0.a1
pyrus_communis	pycom01g11790 pycom01g11820 pycom01g11830 pycom01g11890 pycom01g11900 pycom01g11920 pycom01g11930 pycom01g12020 pycom01g12110 pycom01g12190 pycom01g12290 pycom01g12360 pycom01g12370 pycom01g12440 pycom01g12450 pycom01g12460 pycom01g12490
rosa_chinensis	RchiOBHm_Chr1g0361811
rosa_laevigata	RLG00000027702
rosa_multiflora	Rmu_co8192272.1_g000001 Rmu_ssc0000124.1_g000020
rosa_roxburghii	Rroxscaffold_4G00294690 Rroxscaffold_5G00338610
rosa_rugosa	Rorug01G0291500
rosa_samantha	Rh1AG302000 Rh1BG265000 Rh1DG294900
rosa_wichuraiana	Rw1G026760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	270, 1125
Acc16I	TGCGCA	1 cut(s)	1610
Acc36I	ACCTGC	1 cut(s)	1460
Acc65I	GGTACC	1 cut(s)	1587
AccB1I	GGYRCC	1 cut(s)	1587
AccBSI	CCGCTC	1 cut(s)	1268
AccI	GTMKAC	2 cut(s)	124, 932
AciI	CCGC	1 cut(s)	1268
AclWI	GGATC	2 cut(s)	915, 1278
AcoI	YGGCCR	3 cut(s)	169, 365, 1044
AcsI	RAATTY	2 cut(s)	206, 862
AcuI	CTGAAG	1 cut(s)	1398
AfaI	GTAC	5 cut(s)	7, 61, 1182, 1334, 1589
AfiI	CCNNNNNNNGG	3 cut(s)	178, 363, 761
AflII	CTTAAG	1 cut(s)	926
AgsI	TTSAA	8 cut(s)	160, 230, 295, 983, 1165, 1244, 1454, 1501
AhlI	ACTAGT	1 cut(s)	62
AjiI	CACGTC	1 cut(s)	1324
AjnI	CCWGG	3 cut(s)	839, 965, 1287
AloI	GAACNNNNNNTCC	2 cut(s)	377, 409
AluBI	AGCT	7 cut(s)	165, 238, 637, 952, 1057, 1297, 1390
AluI	AGCT	7 cut(s)	165, 238, 637, 952, 1057, 1297, 1390
Alw21I	GWGCWC	2 cut(s)	167, 425
Alw44I	GTGCAC	1 cut(s)	421
AlwI	GGATC	2 cut(s)	915, 1278
AlwNI	CAGNNNCTG	2 cut(s)	416, 836
AoxI	GGCC	4 cut(s)	112, 169, 365, 1044
ApaLI	GTGCAC	1 cut(s)	421
ApeKI	GCWGC	6 cut(s)	235, 315, 416, 836, 949, 1521
ApoI	RAATTY	2 cut(s)	206, 862
AseI	ATTAAT	1 cut(s)	1347
Asp718I	GGTACC	1 cut(s)	1587
AspLEI	GCGC	1 cut(s)	1611
AspS9I	GGNCC	1 cut(s)	112
AsuC2I	CCSGG	1 cut(s)	254
AsuHPI	GGTGA	2 cut(s)	62, 361
AsuNHI	GCTAGC	1 cut(s)	1364
BaeGI	GKGCMC	1 cut(s)	425
BaeI	ACNNNNGTAYC	2 cut(s)	249, 282
BalI	TGGCCA	1 cut(s)	1046
BanI	GGYRCC	1 cut(s)	1587
BanII	GRGCYC	2 cut(s)	152, 167
BbsI	GAAGAC	1 cut(s)	95
Bbv12I	GWGCWC	2 cut(s)	167, 425
BbvI	GCAGC	6 cut(s)	247, 302, 403, 823, 961, 1508
BccI	CCATC	5 cut(s)	278, 305, 380, 458, 650
BceAI	ACGGC	1 cut(s)	352
BciT130I	CCWGG	3 cut(s)	841, 967, 1289
BciVI	GTATCC	1 cut(s)	250
BclI	TGATCA	1 cut(s)	880
BcnI	CCSGG	1 cut(s)	254
BcuI	ACTAGT	1 cut(s)	62
BfaI	CTAG	9 cut(s)	63, 281, 300, 527, 665, 824, 1274, 1355, 1365
BfmI	CTRYAG	2 cut(s)	201, 719
BfrI	CTTAAG	1 cut(s)	926
BfuAI	ACCTGC	1 cut(s)	1460
BfuI	GTATCC	1 cut(s)	250
BisI	GCNGC	6 cut(s)	236, 316, 417, 837, 950, 1522
BlsI	GCNGC	6 cut(s)	237, 317, 418, 838, 951, 1523
Bme1390I	CCNGG	4 cut(s)	254, 841, 967, 1289
BmgBI	CACGTC	1 cut(s)	1324
BmgT120I	GGNCC	1 cut(s)	112
BmiI	GGNNCC	1 cut(s)	1589
BmrFI	CCNGG	4 cut(s)	254, 841, 967, 1289
BmsI	GCATC	4 cut(s)	805, 1474, 1504, 1607
BmtI	GCTAGC	1 cut(s)	1368
BpiI	GAAGAC	1 cut(s)	95
BpuEI	CTTGAG	3 cut(s)	379, 536, 790
BpuMI	CCSGG	1 cut(s)	254
BsaBI	GATNNNNATC	1 cut(s)	879
BsaJI	CCNNGG	4 cut(s)	840, 966, 1047, 1602
BsaXI	ACNNNNNCTCC	2 cut(s)	1188, 1218
Bsc4I	CCNNNNNNNGG	3 cut(s)	178, 363, 761
Bse1I	ACTGG	1 cut(s)	319
Bse8I	GATNNNNATC	1 cut(s)	879
BseBI	CCWGG	3 cut(s)	841, 967, 1289
BseDI	CCNNGG	4 cut(s)	840, 966, 1047, 1602
BseGI	GGATG	5 cut(s)	90, 391, 820, 1598, 1624
BseJI	GATNNNNATC	1 cut(s)	879
BseLI	CCNNNNNNNGG	3 cut(s)	178, 363, 761
BseMII	CTCAG	2 cut(s)	59, 1049
BseNI	ACTGG	1 cut(s)	319
BseRI	GAGGAG	1 cut(s)	934
BseSI	GKGCMC	1 cut(s)	425
BseXI	GCAGC	6 cut(s)	247, 302, 403, 823, 961, 1508
BsgI	GTGCAG	1 cut(s)	1507
BshFI	GGCC	4 cut(s)	114, 171, 367, 1046
BshNI	GGYRCC	1 cut(s)	1587
BsiHKAI	GWGCWC	2 cut(s)	167, 425
BsiSI	CCGG	4 cut(s)	115, 168, 179, 254
BslI	CCNNNNNNNGG	3 cut(s)	178, 363, 761
BsmI	GAATGC	1 cut(s)	27
BsnI	GGCC	4 cut(s)	114, 171, 367, 1046
Bsp1286I	GDGCHC	3 cut(s)	152, 167, 425
Bsp1407I	TGTACA	1 cut(s)	1332
Bsp143I	GATC	4 cut(s)	880, 907, 1093, 1270
Bsp19I	CCATGG	1 cut(s)	1602
BspACI	CCGC	1 cut(s)	1268
BspANI	GGCC	4 cut(s)	114, 171, 367, 1046
BspCNI	CTCAG	2 cut(s)	60, 1050
BspHI	TCATGA	1 cut(s)	639
BspLI	GGNNCC	1 cut(s)	1589
BspMAI	CTGCAG	1 cut(s)	723
BspMI	ACCTGC	1 cut(s)	1460
BspOI	GCTAGC	1 cut(s)	1368
BspPI	GGATC	2 cut(s)	915, 1278
BspQI	GCTCTTC	1 cut(s)	155
BspT107I	GGYRCC	1 cut(s)	1587
BspTI	CTTAAG	1 cut(s)	926
BsrBI	CCGCTC	1 cut(s)	1268
BsrGI	TGTACA	1 cut(s)	1332
BsrI	ACTGG	1 cut(s)	319
BssECI	CCNNGG	4 cut(s)	840, 966, 1047, 1602
BssMI	GATC	4 cut(s)	880, 907, 1093, 1270
BssT1I	CCWWGG	2 cut(s)	1047, 1602
Bst2UI	CCWGG	3 cut(s)	841, 967, 1289
Bst4CI	ACNGT	4 cut(s)	509, 565, 580, 1438
Bst6I	CTCTTC	2 cut(s)	155, 1400
BstAFI	CTTAAG	1 cut(s)	926
BstAPI	GCANNNNNTGC	1 cut(s)	416
BstAUI	TGTACA	1 cut(s)	1332
BstC8I	GCNNGC	4 cut(s)	421, 1069, 1366, 1519
BstDEI	CTNAG	2 cut(s)	68, 1058
BstDSI	CCRYGG	1 cut(s)	1602
BstEII	GGTNACC	1 cut(s)	659
BstF5I	GGATG	5 cut(s)	90, 391, 820, 1598, 1624
BstHHI	GCGC	1 cut(s)	1611
BstKTI	GATC	4 cut(s)	883, 910, 1096, 1273
BstMBI	GATC	4 cut(s)	880, 907, 1093, 1270
BstMWI	GCNNNNNNNGC	5 cut(s)	416, 643, 771, 1303, 1396
BstNI	CCWGG	3 cut(s)	841, 967, 1289
BstNSI	RCATGY	1 cut(s)	1071
BstPI	GGTNACC	1 cut(s)	659
BstSCI	CCNGG	4 cut(s)	252, 839, 965, 1287
BstSFI	CTRYAG	2 cut(s)	201, 719
BstSLI	GKGCMC	1 cut(s)	425
BstV1I	GCAGC	6 cut(s)	247, 302, 403, 823, 961, 1508
BstV2I	GAAGAC	1 cut(s)	95
BstX2I	RGATCY	1 cut(s)	1270
BstXI	CCANNNNNNTGG	1 cut(s)	1219
BstYI	RGATCY	1 cut(s)	1270
BsuI	GTATCC	1 cut(s)	250
BsuRI	GGCC	4 cut(s)	114, 171, 367, 1046
BtgI	CCRYGG	1 cut(s)	1602
BtrI	CACGTC	1 cut(s)	1324
BtsCI	GGATG	5 cut(s)	90, 391, 820, 1598, 1624
BtsIMutI	CAGTG	4 cut(s)	707, 890, 1096, 1434
BveI	ACCTGC	1 cut(s)	1460
Cac8I	GCNNGC	4 cut(s)	421, 1069, 1366, 1519
CaiI	CAGNNNCTG	2 cut(s)	416, 836
CciI	TCATGA	1 cut(s)	639
CfoI	GCGC	1 cut(s)	1611
Cfr13I	GGNCC	1 cut(s)	112
CseI	GACGC	1 cut(s)	191
Csp6I	GTAC	5 cut(s)	6, 60, 1181, 1333, 1588
CviQI	GTAC	5 cut(s)	6, 60, 1181, 1333, 1588
DdeI	CTNAG	2 cut(s)	68, 1058
DpnI	GATC	4 cut(s)	882, 909, 1095, 1272
DpnII	GATC	4 cut(s)	880, 907, 1093, 1270
EaeI	YGGCCR	3 cut(s)	169, 365, 1044
Eam1104I	CTCTTC	2 cut(s)	155, 1400
EarI	CTCTTC	2 cut(s)	155, 1400
Ecl136II	GAGCTC	1 cut(s)	165
Eco130I	CCWWGG	2 cut(s)	1047, 1602
Eco24I	GRGCYC	2 cut(s)	152, 167
Eco53kI	GAGCTC	1 cut(s)	165
Eco57I	CTGAAG	1 cut(s)	1398
Eco91I	GGTNACC	1 cut(s)	659
EcoICRI	GAGCTC	1 cut(s)	165
EcoO65I	GGTNACC	1 cut(s)	659
EcoRI	GAATTC	1 cut(s)	206
EcoRII	CCWGG	3 cut(s)	839, 965, 1287
EcoT14I	CCWWGG	2 cut(s)	1047, 1602
EcoT22I	ATGCAT	1 cut(s)	1489
EcoT38I	GRGCYC	2 cut(s)	152, 167
ErhI	CCWWGG	2 cut(s)	1047, 1602
FalI	AAGNNNNNCTT	2 cut(s)	1145, 1177
FauNDI	CATATG	2 cut(s)	129, 903
FbaI	TGATCA	1 cut(s)	880
FblI	GTMKAC	2 cut(s)	124, 932
Fnu4HI	GCNGC	6 cut(s)	236, 316, 417, 837, 950, 1522
FokI	GGATG	4 cut(s)	97, 398, 827, 1585
FriOI	GRGCYC	2 cut(s)	152, 167
Fsp4HI	GCNGC	6 cut(s)	236, 316, 417, 837, 950, 1522
FspBI	CTAG	9 cut(s)	63, 281, 300, 527, 665, 824, 1274, 1355, 1365
FspI	TGCGCA	1 cut(s)	1610
GlaI	GCGC	1 cut(s)	1610
GluI	GCNGC	6 cut(s)	236, 316, 417, 837, 950, 1522
HaeIII	GGCC	4 cut(s)	114, 171, 367, 1046
HapII	CCGG	4 cut(s)	115, 168, 179, 254
HgaI	GACGC	1 cut(s)	191
HhaI	GCGC	1 cut(s)	1611
Hin6I	GCGC	1 cut(s)	1609
HinP1I	GCGC	1 cut(s)	1609
HinfI	GANTC	4 cut(s)	70, 91, 803, 827
HpaII	CCGG	4 cut(s)	115, 168, 179, 254
HphI	GGTGA	2 cut(s)	62, 361
Hpy166II	GTNNAC	6 cut(s)	125, 423, 870, 933, 1181, 1384
Hpy188I	TCNGA	5 cut(s)	69, 80, 154, 342, 832
Hpy188III	TCNNGA	5 cut(s)	397, 640, 1150, 1319, 1424
Hpy8I	GTNNAC	6 cut(s)	125, 423, 870, 933, 1181, 1384
HpyAV	CCTTC	8 cut(s)	298, 399, 442, 605, 682, 1147, 1354, 1588
HpyCH4III	ACNGT	4 cut(s)	509, 565, 580, 1438
HpyCH4IV	ACGT	1 cut(s)	1323
HpyF10VI	GCNNNNNNNGC	5 cut(s)	416, 643, 771, 1303, 1396
HpyF3I	CTNAG	2 cut(s)	68, 1058
HpySE526I	ACGT	1 cut(s)	1323
HspAI	GCGC	1 cut(s)	1609
KpnI	GGTACC	1 cut(s)	1591
Ksp22I	TGATCA	1 cut(s)	880
Kzo9I	GATC	4 cut(s)	880, 907, 1093, 1270
LguI	GCTCTTC	1 cut(s)	155
LmnI	GCTCC	1 cut(s)	170
Lsp1109I	GCAGC	6 cut(s)	247, 302, 403, 823, 961, 1508
LweI	GCATC	4 cut(s)	805, 1474, 1504, 1607
MaeI	CTAG	9 cut(s)	63, 281, 300, 527, 665, 824, 1274, 1355, 1365
MaeII	ACGT	1 cut(s)	1323
MaeIII	GTNAC	6 cut(s)	434, 469, 585, 659, 1432, 1537
MalI	GATC	4 cut(s)	882, 909, 1095, 1272
MbiI	CCGCTC	1 cut(s)	1268
MboI	GATC	4 cut(s)	880, 907, 1093, 1270
MboII	GAAGA	6 cut(s)	100, 172, 457, 551, 863, 1417
MfeI	CAATTG	1 cut(s)	911
MflI	RGATCY	1 cut(s)	1270
MhlI	GDGCHC	3 cut(s)	152, 167, 425
MlsI	TGGCCA	1 cut(s)	1046
MluNI	TGGCCA	1 cut(s)	1046
MlyI	GAGTC	2 cut(s)	79, 85
Mox20I	TGGCCA	1 cut(s)	1046
Mph1103I	ATGCAT	1 cut(s)	1489
MscI	TGGCCA	1 cut(s)	1046
MslI	CAYNNNNRTG	1 cut(s)	1217
Msp20I	TGGCCA	1 cut(s)	1046
MspA1I	CMGCKG	1 cut(s)	952
MspCI	CTTAAG	1 cut(s)	926
MspI	CCGG	4 cut(s)	115, 168, 179, 254
MspR9I	CCNGG	4 cut(s)	254, 841, 967, 1289
MunI	CAATTG	1 cut(s)	911
Mva1269I	GAATGC	1 cut(s)	27
MvaI	CCWGG	3 cut(s)	841, 967, 1289
MwoI	GCNNNNNNNGC	5 cut(s)	416, 643, 771, 1303, 1396
NciI	CCSGG	1 cut(s)	254
NcoI	CCATGG	1 cut(s)	1602
NdeI	CATATG	2 cut(s)	129, 903
NdeII	GATC	4 cut(s)	880, 907, 1093, 1270
NheI	GCTAGC	1 cut(s)	1364
NlaIV	GGNNCC	1 cut(s)	1589
NmeAIII	GCCGAG	1 cut(s)	696
NmuCI	GTSAC	3 cut(s)	434, 585, 1432
NsbI	TGCGCA	1 cut(s)	1610
NsiI	ATGCAT	1 cut(s)	1489
NspI	RCATGY	1 cut(s)	1071
PaeI	GCATGC	1 cut(s)	1071
PagI	TCATGA	1 cut(s)	639
PciSI	GCTCTTC	1 cut(s)	155
PctI	GAATGC	1 cut(s)	27
PfeI	GAWTC	2 cut(s)	803, 827
PfoI	TCCNGGA	2 cut(s)	252, 1287
PkrI	GCNGC	6 cut(s)	237, 317, 418, 838, 951, 1523
PleI	GAGTC	2 cut(s)	78, 85
PpsI	GAGTC	2 cut(s)	78, 85
PshBI	ATTAAT	1 cut(s)	1347
PsiI	TTATAA	2 cut(s)	270, 1125
Psp124BI	GAGCTC	1 cut(s)	167
Psp6I	CCWGG	3 cut(s)	839, 965, 1287
PspEI	GGTNACC	1 cut(s)	659
PspGI	CCWGG	3 cut(s)	839, 965, 1287
PspN4I	GGNNCC	1 cut(s)	1589
PspPI	GGNCC	1 cut(s)	112
PstI	CTGCAG	1 cut(s)	723
PstNI	CAGNNNCTG	2 cut(s)	416, 836
PsuI	RGATCY	1 cut(s)	1270
PvuII	CAGCTG	1 cut(s)	952
RsaI	GTAC	5 cut(s)	7, 61, 1182, 1334, 1589
RsaNI	GTAC	5 cut(s)	6, 60, 1181, 1333, 1588
RseI	CAYNNNNRTG	1 cut(s)	1217
SacI	GAGCTC	1 cut(s)	167
SapI	GCTCTTC	1 cut(s)	155
SatI	GCNGC	6 cut(s)	236, 316, 417, 837, 950, 1522
Sau3AI	GATC	4 cut(s)	880, 907, 1093, 1270
Sau96I	GGNCC	1 cut(s)	112
SchI	GAGTC	2 cut(s)	79, 85
ScrFI	CCNGG	4 cut(s)	254, 841, 967, 1289
SduI	GDGCHC	3 cut(s)	152, 167, 425
SfaNI	GCATC	4 cut(s)	805, 1474, 1504, 1607
SfcI	CTRYAG	2 cut(s)	201, 719
SmiMI	CAYNNNNRTG	1 cut(s)	1217
SmlI	CTYRAG	4 cut(s)	358, 515, 769, 926
SmoI	CTYRAG	4 cut(s)	358, 515, 769, 926
SpeI	ACTAGT	1 cut(s)	62
SphI	GCATGC	1 cut(s)	1071
SsiI	CCGC	1 cut(s)	1268
SspI	AATATT	2 cut(s)	22, 376
SspMI	CTAG	9 cut(s)	63, 281, 300, 527, 665, 824, 1274, 1355, 1365
SstI	GAGCTC	1 cut(s)	167
StyD4I	CCNGG	4 cut(s)	252, 839, 965, 1287
StyI	CCWWGG	2 cut(s)	1047, 1602
TaaI	ACNGT	4 cut(s)	509, 565, 580, 1438
TaiI	ACGT	1 cut(s)	1326
TaqI	TCGA	1 cut(s)	1512
TatI	WGTACW	2 cut(s)	1180, 1332
TfiI	GAWTC	2 cut(s)	803, 827
TscAI	CASTG	4 cut(s)	714, 890, 1096, 1441
TseFI	GTSAC	3 cut(s)	434, 585, 1432
TseI	GCWGC	6 cut(s)	235, 315, 416, 836, 949, 1521
Tsp45I	GTSAC	3 cut(s)	434, 585, 1432
TspDTI	ATGAA	8 cut(s)	20, 101, 133, 656, 948, 1203, 1418, 1448
TspGWI	ACGGA	1 cut(s)	644
TspRI	CASTG	4 cut(s)	714, 890, 1096, 1441
Vha464I	CTTAAG	1 cut(s)	926
VneI	GTGCAC	1 cut(s)	421
VspI	ATTAAT	1 cut(s)	1347
XapI	RAATTY	2 cut(s)	206, 862
XceI	RCATGY	1 cut(s)	1071
XmiI	GTMKAC	2 cut(s)	124, 932
XspI	CTAG	9 cut(s)	63, 281, 300, 527, 665, 824, 1274, 1355, 1365
Zsp2I	ATGCAT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.