pycom10g17480

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
20713293 .. 20717204
3912 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g17480.3

Sequence Viewer

Length: 1746 bp
ATGGCTTCTTTCTTGTCTGGTGATTCCTCTAATTATGGAATGAGTGAAGGTGGTTCCTATAAACACACTCATGACATACCAGACGAAGGAGCCAATTGGTACTTTTCCAGGAAGGAAATTGAAGAAAACTCTCCATCTAAACGAGATGGCATTGACTTAAAAAAAGAGGCATATTTGCGCAAGTCATACTGTACTTTTTTACAAGACCTGGGGATGAGACTTAAAGTACCACAGGTAACAATTGCGACGGCCATAATTTTCTGCCACCGATTCTTCCTTTGCCAATCCCATGCAAAGAATGATAGATGGACCATCGCAACGGTGTGTATGTTTCTCGCTGGGAAGGTTGAAGAAACTCCCAGGCCGCTGAAAGATGTTATTCTTGTCTCATATGAAATTATTTATAAAAAGGATCCTGCAGCAGTTCATAGAATCAAGCAAAAGGAACTATATGAACAGCAGAAAGAATTAATTTTACTCGGAGAGAGGGTTGTTCTTGGAACCCTTGCTTTTGATTTTAATGTACACCATCCATATAAACCCCTGGTTGAGGCAATAAAGAAATTCAAAGTAGCTCAAAATGCCCTTGCCCAAGTTGCATGGAATTTTGTAAATGATGGACTTCGGACATCACTTTGCTTGCAATTTAAGCCCCACCACATTGCGGCTGGTGCCATTTTTCTTGCTGCTAAGTTCCTCAAAGTAAAGCTTCCATCAGATGGCGAGAAGGTCTGGTGGCAAGAGTTTGATGTCACCCCACGCCAATTGGAGGAGGTTAGCAATCAAATGCTGGAACTATATGAACAAAATCGGTTACTGCCTTCCAATGACGTTGAAGGAAGTTCAGTGAGTGGTGCTATTCATCAGGCTTCTGCAAAACCTACGACCAGCAATGATGAACAGGCAACAGGCAACAGTCATTTGCAGGCTGGAGTTACAAGACCTGGGACCTCAAAGCTAGCATCGAGGCAAGGGTCTGAGCAGTCATATGCTGAGAATGGTGGACCTGCTAGAACAACCCAAAGTCAAAATAATGACAACAGAAATGCTGAATTGAAAAGTGCCGCAGAGCAGAATATGGATGCTGAACTTCAACCCCCTGAAGCTCCACCGCACCAGGAGAAGGTGGGTGAAGCTCATGTATCAAGGTTTGTATCAGAGGGACATAGTGAAGATGGTCAAGAAAGAGAGAGCAATATCGGGAAAGGTGAAACAAGGGAAGGACGGGAACCAAAGGACAAACATTTTGGCCGAAATCTGGATAATAGGCAAAGTGCACAAGGCCGATCACCTCAGGAAGCTATAAAAAAAATTGACAAGGACAAGGTAAGGGCAGCACTTGAGAAACGAAGGAAAGCTGTTGCTGATGTTACTCGAAAGACAGATTTTCTGGATGAGGATGATTTGATTGAGAAAGAACTGGAAGATGGTATTGAACTGGCTTCAGGGAGTGAGAAAAACAAGCGGGACCGGAGGCAAAGCTGGCCGAAGCCCTCGAATAGACCAGAACATGGAGATGGACCACATTTAAACAATATAGAAGAAGGTGAGGTATCGGCACTTGATTCAGGACAAGTATTTCATTCACCCAAGTCAAGCAGTCGCAAGAGAAAGGCAGGAAGCCCACCAGATGATCACCGTAATCACCGCAATCACAGTGATTATACAGATGATCGTAACAGAGTGGGCCGGGTTGGACACACAGAAAGAGATAACAAAAGGCATTCACAGGAGAATCATGTGTGA

Protein Analysis

582

Amino Acids

65.48

Weight (kDa)

6.94

Isoelectric Point (pI)

49.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 405
Acc16I TGCGCA 1 cut(s) 179
Acc36I ACCTGC 1 cut(s) 1015
AccB1I GGYRCC 1 cut(s) 671
AccB7I CCANNNNNTGG 2 cut(s) 719, 1511
AciI CCGC 6 cut(s) 365, 665, 1065, 1112, 1465, 1648
AclWI GGATC 2 cut(s) 407, 420
AcoI YGGCCR 3 cut(s) 249, 1249, 1484
AcsI RAATTY 2 cut(s) 563, 604
AcuI CTGAAG 2 cut(s) 1122, 1428
AfaI GTAC 4 cut(s) 101, 193, 228, 525
AfiI CCNNNNNNNGG 8 cut(s) 86, 550, 664, 719, 769, 1123, 1258, 1511
AgsI TTSAA 7 cut(s) 122, 350, 568, 836, 1057, 1094, 1436
AjnI CCWGG 6 cut(s) 107, 207, 359, 543, 943, 1116
AluBI AGCT 8 cut(s) 575, 709, 958, 1106, 1136, 1301, 1358, 1482
AluI AGCT 8 cut(s) 575, 709, 958, 1106, 1136, 1301, 1358, 1482
Alw21I GWGCWC 1 cut(s) 1279
Alw26I GTCTC 2 cut(s) 211, 391
Alw44I GTGCAC 1 cut(s) 1275
AlwI GGATC 2 cut(s) 407, 420
AoxI GGCC 6 cut(s) 249, 362, 1249, 1282, 1484, 1687
ApaLI GTGCAC 1 cut(s) 1275
ApeKI GCWGC 3 cut(s) 419, 686, 1334
ApoI RAATTY 2 cut(s) 563, 604
ArsI GACNNNNNNTTYG 2 cut(s) 1229, 1261
AseI ATTAAT 1 cut(s) 470
AspLEI GCGC 1 cut(s) 180
AspS9I GGNCC 6 cut(s) 309, 948, 1004, 1468, 1520, 1687
AsuC2I CCSGG 1 cut(s) 1691
AsuHPI GGTGA 9 cut(s) 32, 745, 1142, 1220, 1281, 1559, 1578, 1628, 1637
AsuNHI GCTAGC 1 cut(s) 958
AvaII GGWCC 5 cut(s) 309, 948, 1004, 1468, 1520
AxyI CCTNAGG 1 cut(s) 1293
BaeGI GKGCMC 1 cut(s) 1279
BamHI GGATCC 1 cut(s) 412
BanI GGYRCC 1 cut(s) 671
Bbv12I GWGCWC 1 cut(s) 1279
BbvI GCAGC 3 cut(s) 431, 673, 1346
BceAI ACGGC 1 cut(s) 264
BciT130I CCWGG 6 cut(s) 109, 209, 361, 545, 945, 1118
BclI TGATCA 1 cut(s) 1633
BcnI CCSGG 1 cut(s) 1691
BcoDI GTCTC 2 cut(s) 211, 391
BfaI CTAG 2 cut(s) 959, 1011
BfmI CTRYAG 1 cut(s) 417
BfuAI ACCTGC 1 cut(s) 1015
BisI GCNGC 6 cut(s) 365, 420, 666, 687, 1065, 1335
BlsI GCNGC 6 cut(s) 366, 421, 667, 688, 1066, 1336
Bme1390I CCNGG 7 cut(s) 109, 209, 361, 545, 945, 1118, 1691
Bme18I GGWCC 5 cut(s) 309, 948, 1004, 1468, 1520
BmgT120I GGNCC 6 cut(s) 309, 948, 1004, 1468, 1520, 1687
BmiI GGNNCC 8 cut(s) 55, 91, 414, 502, 673, 949, 1230, 1469
BmrFI CCNGG 7 cut(s) 109, 209, 361, 545, 945, 1118, 1691
BmsI GCATC 2 cut(s) 971, 1072
BmtI GCTAGC 1 cut(s) 962
BpmI CTGGAG 1 cut(s) 951
BpuEI CTTGAG 1 cut(s) 1361
BpuMI CCSGG 1 cut(s) 1691
BsaJI CCNNGG 4 cut(s) 208, 359, 543, 944
BsaWI WCCGGW 1 cut(s) 1470
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bsc4I CCNNNNNNNGG 8 cut(s) 86, 550, 664, 719, 769, 1123, 1258, 1511
Bse1I ACTGG 2 cut(s) 1425, 1443
Bse21I CCTNAGG 1 cut(s) 1293
Bse3DI GCAATG 2 cut(s) 660, 898
BseBI CCWGG 6 cut(s) 109, 209, 361, 545, 945, 1118
BseDI CCNNGG 4 cut(s) 208, 359, 543, 944
BseGI GGATG 5 cut(s) 219, 529, 1087, 1399, 1405
BseLI CCNNNNNNNGG 8 cut(s) 86, 550, 664, 719, 769, 1123, 1258, 1511
BseMI GCAATG 2 cut(s) 660, 898
BseMII CTCAG 3 cut(s) 969, 984, 1307
BseNI ACTGG 2 cut(s) 1425, 1443
BseRI GAGGAG 1 cut(s) 785
BseSI GKGCMC 1 cut(s) 1279
BseXI GCAGC 3 cut(s) 431, 673, 1346
BseYI CCCAGC 1 cut(s) 338
BshFI GGCC 6 cut(s) 251, 364, 1251, 1284, 1486, 1689
BshNI GGYRCC 1 cut(s) 671
BsiHKAI GWGCWC 1 cut(s) 1279
BsiSI CCGG 2 cut(s) 1471, 1690
BslFI GGGAC 3 cut(s) 961, 1176, 1481
BslI CCNNNNNNNGG 8 cut(s) 86, 550, 664, 719, 769, 1123, 1258, 1511
BsmAI GTCTC 2 cut(s) 211, 391
BsmFI GGGAC 3 cut(s) 961, 1176, 1481
BsmI GAATGC 1 cut(s) 1723
BsnI GGCC 6 cut(s) 251, 364, 1251, 1284, 1486, 1689
Bsp1286I GDGCHC 1 cut(s) 1279
Bsp1407I TGTACA 1 cut(s) 523
Bsp143I GATC 4 cut(s) 412, 1286, 1633, 1672
BspACI CCGC 6 cut(s) 365, 665, 1065, 1112, 1465, 1648
BspANI GGCC 6 cut(s) 251, 364, 1251, 1284, 1486, 1689
BspCNI CTCAG 3 cut(s) 970, 985, 1306
BspHI TCATGA 1 cut(s) 70
BspLI GGNNCC 8 cut(s) 55, 91, 414, 502, 673, 949, 1230, 1469
BspMAI CTGCAG 1 cut(s) 421
BspMI ACCTGC 1 cut(s) 1015
BspOI GCTAGC 1 cut(s) 962
BspPI GGATC 2 cut(s) 407, 420
BspT107I GGYRCC 1 cut(s) 671
BsrDI GCAATG 2 cut(s) 660, 898
BsrGI TGTACA 1 cut(s) 523
BsrI ACTGG 2 cut(s) 1425, 1443
BssECI CCNNGG 4 cut(s) 208, 359, 543, 944
BssMI GATC 4 cut(s) 412, 1286, 1633, 1672
Bst2UI CCWGG 6 cut(s) 109, 209, 361, 545, 945, 1118
Bst4CI ACNGT 5 cut(s) 191, 322, 917, 1640, 1658
BstAUI TGTACA 1 cut(s) 523
BstC8I GCNNGC 4 cut(s) 641, 927, 960, 1484
BstDEI CTNAG 4 cut(s) 690, 978, 993, 1293
BstENI CCTNNNNNAGG 1 cut(s) 548
BstF5I GGATG 5 cut(s) 219, 529, 1087, 1399, 1405
BstHHI GCGC 1 cut(s) 180
BstKTI GATC 4 cut(s) 415, 1289, 1636, 1675
BstMAI GTCTC 2 cut(s) 211, 391
BstMBI GATC 4 cut(s) 412, 1286, 1633, 1672
BstMWI GCNNNNNNNGC 5 cut(s) 581, 596, 649, 671, 1483
BstNI CCWGG 6 cut(s) 109, 209, 361, 545, 945, 1118
BstSCI CCNGG 7 cut(s) 107, 207, 359, 543, 943, 1116, 1689
BstSFI CTRYAG 1 cut(s) 417
BstSLI GKGCMC 1 cut(s) 1279
BstV1I GCAGC 3 cut(s) 431, 673, 1346
BstX2I RGATCY 1 cut(s) 412
BstYI RGATCY 1 cut(s) 412
Bsu36I CCTNAGG 1 cut(s) 1293
BsuRI GGCC 6 cut(s) 251, 364, 1251, 1284, 1486, 1689
BtgZI GCGATG 1 cut(s) 298
BtsCI GGATG 5 cut(s) 219, 529, 1087, 1399, 1405
BtsIMutI CAGTG 2 cut(s) 852, 1663
BveI ACCTGC 1 cut(s) 1015
Cac8I GCNNGC 4 cut(s) 641, 927, 960, 1484
CciI TCATGA 1 cut(s) 70
CfoI GCGC 1 cut(s) 180
Cfr13I GGNCC 6 cut(s) 309, 948, 1004, 1468, 1520, 1687
Csp6I GTAC 4 cut(s) 100, 192, 227, 524
CspCI CAANNNNNGTGG 2 cut(s) 747, 782
CviAII CATG 6 cut(s) 71, 290, 600, 1139, 1511, 1739
CviQI GTAC 4 cut(s) 100, 192, 227, 524
DdeI CTNAG 4 cut(s) 690, 978, 993, 1293
DpnI GATC 4 cut(s) 414, 1288, 1635, 1674
DpnII GATC 4 cut(s) 412, 1286, 1633, 1672
DraI TTTAAA 1 cut(s) 1530
EaeI YGGCCR 3 cut(s) 249, 1249, 1484
Eco47I GGWCC 5 cut(s) 309, 948, 1004, 1468, 1520
Eco57I CTGAAG 2 cut(s) 1122, 1428
Eco81I CCTNAGG 1 cut(s) 1293
EcoNI CCTNNNNNAGG 1 cut(s) 548
EcoO109I RGGNCCY 1 cut(s) 948
EcoRII CCWGG 6 cut(s) 107, 207, 359, 543, 943, 1116
FaeI CATG 6 cut(s) 74, 293, 603, 1142, 1514, 1742
FalI AAGNNNNNCTT 2 cut(s) 693, 725
FaqI GGGAC 3 cut(s) 961, 1176, 1481
FatI CATG 6 cut(s) 70, 289, 599, 1138, 1510, 1738
FauI CCCGC 1 cut(s) 1458
FauNDI CATATG 2 cut(s) 391, 988
FbaI TGATCA 1 cut(s) 1633
Fnu4HI GCNGC 6 cut(s) 365, 420, 666, 687, 1065, 1335
FokI GGATG 5 cut(s) 226, 516, 1094, 1406, 1412
Fsp4HI GCNGC 6 cut(s) 365, 420, 666, 687, 1065, 1335
FspBI CTAG 2 cut(s) 959, 1011
FspI TGCGCA 1 cut(s) 179
GlaI GCGC 1 cut(s) 179
GluI GCNGC 6 cut(s) 365, 420, 666, 687, 1065, 1335
GsaI CCCAGC 1 cut(s) 342
GsuI CTGGAG 1 cut(s) 951
HaeIII GGCC 6 cut(s) 251, 364, 1251, 1284, 1486, 1689
HapII CCGG 2 cut(s) 1471, 1690
HhaI GCGC 1 cut(s) 180
Hin1II CATG 6 cut(s) 74, 293, 603, 1142, 1514, 1742
Hin6I GCGC 1 cut(s) 178
HinP1I GCGC 1 cut(s) 178
HindIII AAGCTT 1 cut(s) 707
HinfI GANTC 5 cut(s) 23, 270, 432, 1565, 1735
HpaII CCGG 2 cut(s) 1471, 1690
HphI GGTGA 9 cut(s) 32, 745, 1142, 1220, 1281, 1559, 1578, 1628, 1637
Hpy166II GTNNAC 3 cut(s) 526, 1004, 1277
Hpy188I TCNGA 5 cut(s) 482, 627, 718, 979, 1159
Hpy188III TCNNGA 7 cut(s) 71, 1181, 1201, 1259, 1295, 1391, 1569
Hpy8I GTNNAC 3 cut(s) 526, 1004, 1277
Hpy99I CGWCG 1 cut(s) 250
HpyCH4III ACNGT 5 cut(s) 191, 322, 917, 1640, 1658
HpyCH4IV ACGT 1 cut(s) 831
HpyCH4V TGCA 7 cut(s) 293, 419, 599, 643, 875, 925, 1277
HpyF10VI GCNNNNNNNGC 5 cut(s) 581, 596, 649, 671, 1483
HpyF3I CTNAG 4 cut(s) 690, 978, 993, 1293
HpySE526I ACGT 1 cut(s) 831
Hsp92II CATG 6 cut(s) 74, 293, 603, 1142, 1514, 1742
HspAI GCGC 1 cut(s) 178
Ksp22I TGATCA 1 cut(s) 1633
Kzo9I GATC 4 cut(s) 412, 1286, 1633, 1672
LmnI GCTCC 2 cut(s) 89, 1111
Lsp1109I GCAGC 3 cut(s) 431, 673, 1346
LweI GCATC 2 cut(s) 971, 1072
MaeI CTAG 2 cut(s) 959, 1011
MaeII ACGT 1 cut(s) 831
MaeIII GTNAC 6 cut(s) 235, 751, 813, 934, 1369, 1676
MalI GATC 4 cut(s) 414, 1288, 1635, 1674
MboI GATC 4 cut(s) 412, 1286, 1633, 1672
MboII GAAGA 6 cut(s) 134, 265, 362, 1184, 1436, 1553
MfeI CAATTG 3 cut(s) 94, 240, 764
MflI RGATCY 1 cut(s) 412
MhlI GDGCHC 1 cut(s) 1279
MmeI TCCRAC 1 cut(s) 1675
MseI TTAA 6 cut(s) 158, 222, 470, 519, 648, 1529
MslI CAYNNNNRTG 2 cut(s) 69, 1515
MspA1I CMGCKG 1 cut(s) 367
MspI CCGG 2 cut(s) 1471, 1690
MspR9I CCNGG 7 cut(s) 109, 209, 361, 545, 945, 1118, 1691
MunI CAATTG 3 cut(s) 94, 240, 764
Mva1269I GAATGC 1 cut(s) 1723
MvaI CCWGG 6 cut(s) 109, 209, 361, 545, 945, 1118
MwoI GCNNNNNNNGC 5 cut(s) 581, 596, 649, 671, 1483
NciI CCSGG 1 cut(s) 1691
NdeI CATATG 2 cut(s) 391, 988
NdeII GATC 4 cut(s) 412, 1286, 1633, 1672
NheI GCTAGC 1 cut(s) 958
NlaIII CATG 6 cut(s) 74, 293, 603, 1142, 1514, 1742
NlaIV GGNNCC 8 cut(s) 55, 91, 414, 502, 673, 949, 1230, 1469
NmuCI GTSAC 1 cut(s) 751
NsbI TGCGCA 1 cut(s) 179
PagI TCATGA 1 cut(s) 70
PctI GAATGC 1 cut(s) 1723
PfeI GAWTC 5 cut(s) 23, 270, 432, 1565, 1735
PflMI CCANNNNNTGG 2 cut(s) 719, 1511
PfoI TCCNGGA 1 cut(s) 107
PkrI GCNGC 6 cut(s) 366, 421, 667, 688, 1066, 1336
PpuMI RGGWCCY 1 cut(s) 948
PshBI ATTAAT 1 cut(s) 470
PsiI TTATAA 1 cut(s) 405
Psp5II RGGWCCY 1 cut(s) 948
Psp6I CCWGG 6 cut(s) 107, 207, 359, 543, 943, 1116
PspFI CCCAGC 1 cut(s) 338
PspGI CCWGG 6 cut(s) 107, 207, 359, 543, 943, 1116
PspN4I GGNNCC 8 cut(s) 55, 91, 414, 502, 673, 949, 1230, 1469
PspPI GGNCC 6 cut(s) 309, 948, 1004, 1468, 1520, 1687
PspPPI RGGWCCY 1 cut(s) 948
PstI CTGCAG 1 cut(s) 421
PsuI RGATCY 1 cut(s) 412
RsaI GTAC 4 cut(s) 101, 193, 228, 525
RsaNI GTAC 4 cut(s) 100, 192, 227, 524
RseI CAYNNNNRTG 2 cut(s) 69, 1515
SaqAI TTAA 6 cut(s) 158, 222, 470, 519, 648, 1529
SatI GCNGC 6 cut(s) 365, 420, 666, 687, 1065, 1335
Sau3AI GATC 4 cut(s) 412, 1286, 1633, 1672
Sau96I GGNCC 6 cut(s) 309, 948, 1004, 1468, 1520, 1687
ScrFI CCNGG 7 cut(s) 109, 209, 361, 545, 945, 1118, 1691
SduI GDGCHC 1 cut(s) 1279
SfaNI GCATC 2 cut(s) 971, 1072
SfcI CTRYAG 1 cut(s) 417
SinI GGWCC 5 cut(s) 309, 948, 1004, 1468, 1520
SmiMI CAYNNNNRTG 2 cut(s) 69, 1515
SmlI CTYRAG 1 cut(s) 1340
SmoI CTYRAG 1 cut(s) 1340
SsiI CCGC 6 cut(s) 365, 665, 1065, 1112, 1465, 1648
SspMI CTAG 2 cut(s) 959, 1011
StyD4I CCNGG 7 cut(s) 107, 207, 359, 543, 943, 1116, 1689
TaaI ACNGT 5 cut(s) 191, 322, 917, 1640, 1658
TaiI ACGT 1 cut(s) 834
TaqI TCGA 3 cut(s) 965, 1375, 1496
TatI WGTACW 2 cut(s) 191, 523
TauI GCSGC 3 cut(s) 367, 668, 1067
TfiI GAWTC 5 cut(s) 23, 270, 432, 1565, 1735
Tru1I TTAA 6 cut(s) 158, 222, 470, 519, 648, 1529
Tru9I TTAA 6 cut(s) 158, 222, 470, 519, 648, 1529
TscAI CASTG 2 cut(s) 852, 1663
TseFI GTSAC 1 cut(s) 751
TseI GCWGC 3 cut(s) 419, 686, 1334
Tsp45I GTSAC 1 cut(s) 751
TspDTI ATGAA 7 cut(s) 408, 416, 468, 816, 851, 912, 1571
TspRI CASTG 2 cut(s) 852, 1663
Van91I CCANNNNNTGG 2 cut(s) 719, 1511
VneI GTGCAC 1 cut(s) 1275
VpaK11BI GGWCC 5 cut(s) 309, 948, 1004, 1468, 1520
VspI ATTAAT 1 cut(s) 470
XagI CCTNNNNNAGG 1 cut(s) 548
XapI RAATTY 2 cut(s) 563, 604
XcmI CCANNNNNNNNNTGG 1 cut(s) 665
XspI CTAG 2 cut(s) 959, 1011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.