Rh5CG199800

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
20064723 .. 20069783
5061 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG199800.1

Sequence Viewer

Length: 1482 bp
ATGTTTCTCGCCGGTAAGGTTGAAGAAACTCCCCGGCCTCTGAAAGATGTTATCCTTGTCTCCTATGAAATTATTCATAAGAAGGATCCTGCAGCAGCTCAGAGAATCAAGCAAAAGGAGGTATATGAACAGCAGAAGGAATTGATTTTAACTGGCGAGAGGGTTGTTTTAGGAACTCTTGCTTTTGATTTCAATGTACACCATCCGTATAAACCCCTGGTGGAGGCAATAAAGAAATTCAAAGTAGCTCAAAATGCCCTCGCCCAAGTTGCATGGAATTTTGTTAATGACGGACTTCGGACTTCTCTTTGCTTGCAATTTAAGCCCCACCACATTGCTGCTGGTGCCATTTTTCTTGCCGCCAAGTTCCTCAAAGTAAAGCTTCCATCAGATGGCGAGAAGGTCTGGTGGCAAGAGTTTGATGTCACCCCACGCCAATTGGAGGAGGTTAGCAATCAAATGTTGGAGCTATATGAACAAAATAGATTTCCATCTTCCGACGATGTTGAAGGAACTGTAGCAACTGCTACGAAGACTAAATCCAGGATGGAGCACCAAGACCTGGATCATGGCTCGTCAGTTAAAATTCCGGCCTCACATGAGGCAACAAGTAACAGTCATTTGCAGGCTGGAGGTACAAGATCTGGAACCTCAAGGCCGGCATCTAGGCCTGCATCTGAGCAGTCATATGTTGAGAATGATTACCCCGCTAGAACTTCCCAGAGTCAAAATAATGACTACAGAAGTGCTGGAATGACAGGTTCTTTGGATCAAAATATGGAAGTCGAAGATAATCACCACCCCAAAGTCGAGGAAGCTCAAAATGTATCAAGGTTTGTGTCCGAGGGACGTAGTGAAGAAGGCCAAGAAAGAGAGAGTAATGACAGGAAGGGTGAAATAAGGGAAGGAGGGGACAAACATTTTGGCCGAAATCTGGACAATTCACAAAGTGCCCTTGGTCGATCACCTCAAGAAGCTATTAAGAAAATCGACAAGGACAAAGTAAGGGCAGCATTGGAGAAACGAAGGAAAGCCACTGCTGATATGACCAGGAAAACAGATTTGCTGGATGAGGATGATCTGATTGAGAGGGAGCTGGAAGATGGTATTGAACTGGCTGGTGGGAGTGAGAAAAACAAACGGGACAGAAGGCAAAGCTGGTCCAAGTCCTCACATAGACAAGAACATGAGAGCCTTCATCAGGGAAAACATCGAGAGGGTGTTGGAGATGGTGGACCACGTTTTAGTACTATTGAAGAAGGTGAGGTATCAGCCTTTGAAGCTGGACATGAATTTCCGTCACCCAAATCAAGCAGTCGCAAGAGAAAGGAAGGAAGCCCCCTAGAAATTGTTGCAGAAAAGAAACAGAGACATGATTATCGCCAAAATCACTTTGACCATACTGAAAATCATAACAGGGTAGGCAGAGTTGGCCACACTGAAAGGGATAATAAAAGGCCTGTACAGGAGAATCATGTCTGA

Protein Analysis

493

Amino Acids

55.83

Weight (kDa)

6.56

Isoelectric Point (pI)

51.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CycT2-like_C PF21797 68 - 155 1.8e-07 Cyclin-T2-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 344
AccB7I CCANNNNNTGG 2 cut(s) 392, 562
AciI CCGC 2 cut(s) 360, 708
AclWI GGATC 4 cut(s) 80, 93, 573, 777
AcoI YGGCCR 2 cut(s) 925, 1432
AcsI RAATTY 4 cut(s) 236, 277, 585, 1292
AdeI CACNNNGTG 1 cut(s) 950
AfaI GTAC 4 cut(s) 198, 637, 1249, 1464
AfiI CCNNNNNNNGG 6 cut(s) 223, 392, 442, 562, 934, 1201
AgsI TTSAA 7 cut(s) 23, 193, 241, 509, 1112, 1256, 1280
AjnI CCWGG 4 cut(s) 216, 542, 561, 1049
AluBI AGCT 9 cut(s) 98, 248, 382, 469, 818, 977, 1096, 1158, 1283
AluI AGCT 9 cut(s) 98, 248, 382, 469, 818, 977, 1096, 1158, 1283
Alw21I GWGCWC 1 cut(s) 555
Alw26I GTCTC 2 cut(s) 64, 1363
AlwI GGATC 4 cut(s) 80, 93, 573, 777
AoxI GGCC 8 cut(s) 35, 591, 656, 668, 862, 925, 1432, 1457
ApeKI GCWGC 4 cut(s) 92, 95, 338, 1010
ApoI RAATTY 4 cut(s) 236, 277, 585, 1292
ArsI GACNNNNNNTTYG 4 cut(s) 748, 780, 905, 937
Asp700I GAANNNNTTC 1 cut(s) 72
AspS9I GGNCC 2 cut(s) 1161, 1235
AsuC2I CCSGG 1 cut(s) 34
AsuHPI GGTGA 6 cut(s) 418, 788, 905, 957, 1274, 1293
AvaII GGWCC 2 cut(s) 1161, 1235
BaeGI GKGCMC 1 cut(s) 955
BalI TGGCCA 1 cut(s) 1434
BamHI GGATCC 1 cut(s) 85
BanI GGYRCC 1 cut(s) 344
BbsI GAAGAC 1 cut(s) 539
Bbv12I GWGCWC 1 cut(s) 555
BbvI GCAGC 4 cut(s) 104, 107, 325, 1022
BccI CCATC 7 cut(s) 210, 386, 394, 499, 541, 1097, 1223
BciT130I CCWGG 4 cut(s) 218, 544, 563, 1051
BcnI CCSGG 1 cut(s) 34
BcoDI GTCTC 2 cut(s) 64, 1363
BfaI CTAG 3 cut(s) 666, 711, 1343
BfmI CTRYAG 3 cut(s) 90, 516, 739
BglII AGATCT 1 cut(s) 641
BisI GCNGC 5 cut(s) 93, 96, 339, 360, 1011
BlsI GCNGC 5 cut(s) 94, 97, 340, 361, 1012
BmcAI AGTACT 1 cut(s) 1249
Bme1390I CCNGG 5 cut(s) 34, 218, 544, 563, 1051
Bme18I GGWCC 2 cut(s) 1161, 1235
BmgT120I GGNCC 2 cut(s) 1161, 1235
BmiI GGNNCC 3 cut(s) 87, 346, 649
BmrFI CCNGG 5 cut(s) 34, 218, 544, 563, 1051
BmsI GCATC 2 cut(s) 671, 683
BpiI GAAGAC 1 cut(s) 539
BpmI CTGGAG 1 cut(s) 651
BpuEI CTTGAG 2 cut(s) 637, 954
BpuMI CCSGG 1 cut(s) 34
BsaBI GATNNNNATC 1 cut(s) 490
BsaJI CCNNGG 4 cut(s) 32, 216, 843, 955
Bsc4I CCNNNNNNNGG 6 cut(s) 223, 392, 442, 562, 934, 1201
Bse118I RCCGGY 2 cut(s) 11, 658
Bse1I ACTGG 2 cut(s) 157, 1119
Bse3DI GCAATG 1 cut(s) 333
Bse8I GATNNNNATC 1 cut(s) 490
BseBI CCWGG 4 cut(s) 218, 544, 563, 1051
BseDI CCNNGG 4 cut(s) 32, 216, 843, 955
BseGI GGATG 4 cut(s) 202, 552, 1075, 1081
BseJI GATNNNNATC 1 cut(s) 490
BseLI CCNNNNNNNGG 6 cut(s) 223, 392, 442, 562, 934, 1201
BseMI GCAATG 1 cut(s) 333
BseMII CTCAG 2 cut(s) 113, 669
BseNI ACTGG 2 cut(s) 157, 1119
BseRI GAGGAG 1 cut(s) 458
BseSI GKGCMC 1 cut(s) 955
BseXI GCAGC 4 cut(s) 104, 107, 325, 1022
BshFI GGCC 8 cut(s) 37, 593, 658, 670, 864, 927, 1434, 1459
BshNI GGYRCC 1 cut(s) 344
BsiHKAI GWGCWC 1 cut(s) 555
BsiSI CCGG 4 cut(s) 12, 34, 590, 659
BslFI GGGAC 3 cut(s) 861, 926, 1157
BslI CCNNNNNNNGG 6 cut(s) 223, 392, 442, 562, 934, 1201
BsmAI GTCTC 2 cut(s) 64, 1363
BsmFI GGGAC 3 cut(s) 861, 926, 1157
BsnI GGCC 8 cut(s) 37, 593, 658, 670, 864, 927, 1434, 1459
Bsp1286I GDGCHC 2 cut(s) 555, 955
Bsp1407I TGTACA 2 cut(s) 196, 1462
Bsp143I GATC 6 cut(s) 85, 565, 641, 769, 962, 1078
BspACI CCGC 2 cut(s) 360, 708
BspANI GGCC 8 cut(s) 37, 593, 658, 670, 864, 927, 1434, 1459
BspCNI CTCAG 2 cut(s) 112, 670
BspLI GGNNCC 3 cut(s) 87, 346, 649
BspMAI CTGCAG 1 cut(s) 94
BspPI GGATC 4 cut(s) 80, 93, 573, 777
BspT107I GGYRCC 1 cut(s) 344
BsrDI GCAATG 1 cut(s) 333
BsrFI RCCGGY 2 cut(s) 11, 658
BsrGI TGTACA 2 cut(s) 196, 1462
BsrI ACTGG 2 cut(s) 157, 1119
BssAI RCCGGY 2 cut(s) 11, 658
BssECI CCNNGG 4 cut(s) 32, 216, 843, 955
BssMI GATC 6 cut(s) 85, 565, 641, 769, 962, 1078
BssT1I CCWWGG 1 cut(s) 955
Bst2UI CCWGG 4 cut(s) 218, 544, 563, 1051
Bst4CI ACNGT 2 cut(s) 517, 617
BstAUI TGTACA 2 cut(s) 196, 1462
BstC8I GCNNGC 4 cut(s) 314, 627, 660, 672
BstDEI CTNAG 2 cut(s) 99, 678
BstENI CCTNNNNNAGG 2 cut(s) 221, 1199
BstF5I GGATG 4 cut(s) 202, 552, 1075, 1081
BstKTI GATC 6 cut(s) 88, 568, 644, 772, 965, 1081
BstMAI GTCTC 2 cut(s) 64, 1363
BstMBI GATC 6 cut(s) 85, 565, 641, 769, 962, 1078
BstMWI GCNNNNNNNGC 6 cut(s) 254, 269, 322, 344, 1280, 1431
BstNI CCWGG 4 cut(s) 218, 544, 563, 1051
BstSCI CCNGG 5 cut(s) 32, 216, 542, 561, 1049
BstSFI CTRYAG 3 cut(s) 90, 516, 739
BstSLI GKGCMC 1 cut(s) 955
BstV1I GCAGC 4 cut(s) 104, 107, 325, 1022
BstV2I GAAGAC 1 cut(s) 539
BstX2I RGATCY 2 cut(s) 85, 641
BstYI RGATCY 2 cut(s) 85, 641
BsuRI GGCC 8 cut(s) 37, 593, 658, 670, 864, 927, 1434, 1459
BtsCI GGATG 4 cut(s) 202, 552, 1075, 1081
BtsI GCAGTG 1 cut(s) 1035
BtsIMutI CAGTG 2 cut(s) 1035, 1437
Cac8I GCNNGC 4 cut(s) 314, 627, 660, 672
Cfr10I RCCGGY 2 cut(s) 11, 658
Cfr13I GGNCC 2 cut(s) 1161, 1235
Csp6I GTAC 4 cut(s) 197, 636, 1248, 1463
CspCI CAANNNNNGTGG 2 cut(s) 420, 455
CviAII CATG 7 cut(s) 273, 569, 599, 1187, 1289, 1373, 1475
CviQI GTAC 4 cut(s) 197, 636, 1248, 1463
DdeI CTNAG 2 cut(s) 99, 678
DpnI GATC 6 cut(s) 87, 567, 643, 771, 964, 1080
DpnII GATC 6 cut(s) 85, 565, 641, 769, 962, 1078
DraIII CACNNNGTG 1 cut(s) 950
EaeI YGGCCR 2 cut(s) 925, 1432
Eco130I CCWWGG 1 cut(s) 955
Eco147I AGGCCT 2 cut(s) 670, 1459
Eco47I GGWCC 2 cut(s) 1161, 1235
EcoNI CCTNNNNNAGG 2 cut(s) 221, 1199
EcoRII CCWGG 4 cut(s) 216, 542, 561, 1049
EcoT14I CCWWGG 1 cut(s) 955
ErhI CCWWGG 1 cut(s) 955
FaeI CATG 7 cut(s) 276, 572, 602, 1190, 1292, 1376, 1478
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FaqI GGGAC 3 cut(s) 861, 926, 1157
FatI CATG 7 cut(s) 272, 568, 598, 1186, 1288, 1372, 1474
FauI CCCGC 1 cut(s) 715
FauNDI CATATG 1 cut(s) 688
Fnu4HI GCNGC 5 cut(s) 93, 96, 339, 360, 1011
FokI GGATG 4 cut(s) 189, 559, 1082, 1088
Fsp4HI GCNGC 5 cut(s) 93, 96, 339, 360, 1011
FspBI CTAG 3 cut(s) 666, 711, 1343
GluI GCNGC 5 cut(s) 93, 96, 339, 360, 1011
GsuI CTGGAG 1 cut(s) 651
HaeIII GGCC 8 cut(s) 37, 593, 658, 670, 864, 927, 1434, 1459
HapII CCGG 4 cut(s) 12, 34, 590, 659
Hin1II CATG 7 cut(s) 276, 572, 602, 1190, 1292, 1376, 1478
HindIII AAGCTT 1 cut(s) 380
HinfI GANTC 3 cut(s) 105, 724, 1471
HpaII CCGG 4 cut(s) 12, 34, 590, 659
HphI GGTGA 6 cut(s) 418, 788, 905, 957, 1274, 1293
Hpy166II GTNNAC 2 cut(s) 199, 1235
Hpy188I TCNGA 9 cut(s) 42, 102, 300, 391, 499, 679, 844, 1083, 1481
Hpy188III TCNNGA 4 cut(s) 645, 935, 971, 1214
Hpy8I GTNNAC 2 cut(s) 199, 1235
Hpy99I CGWCG 1 cut(s) 503
HpyCH4III ACNGT 2 cut(s) 517, 617
HpyCH4IV ACGT 2 cut(s) 850, 1240
HpyCH4V TGCA 6 cut(s) 92, 272, 316, 625, 674, 1355
HpyF10VI GCNNNNNNNGC 6 cut(s) 254, 269, 322, 344, 1280, 1431
HpyF3I CTNAG 2 cut(s) 99, 678
HpySE526I ACGT 2 cut(s) 850, 1240
Hsp92II CATG 7 cut(s) 276, 572, 602, 1190, 1292, 1376, 1478
KroI GCCGGC 1 cut(s) 658
KroNI GCCGGC 1 cut(s) 660
Kzo9I GATC 6 cut(s) 85, 565, 641, 769, 962, 1078
LmnI GCTCC 3 cut(s) 466, 550, 1093
Lsp1109I GCAGC 4 cut(s) 104, 107, 325, 1022
LweI GCATC 2 cut(s) 671, 683
MaeI CTAG 3 cut(s) 666, 711, 1343
MaeII ACGT 2 cut(s) 850, 1240
MaeIII GTNAC 3 cut(s) 424, 611, 1299
MalI GATC 6 cut(s) 87, 567, 643, 771, 964, 1080
MboI GATC 6 cut(s) 85, 565, 641, 769, 962, 1078
MboII GAAGA 7 cut(s) 35, 486, 544, 800, 869, 1112, 1268
MfeI CAATTG 1 cut(s) 437
MflI RGATCY 2 cut(s) 85, 641
MhlI GDGCHC 2 cut(s) 555, 955
MlsI TGGCCA 1 cut(s) 1434
MluNI TGGCCA 1 cut(s) 1434
MlyI GAGTC 1 cut(s) 733
MmeI TCCRAC 3 cut(s) 444, 522, 1204
Mox20I TGGCCA 1 cut(s) 1434
MroNI GCCGGC 1 cut(s) 658
MroXI GAANNNNTTC 1 cut(s) 72
MscI TGGCCA 1 cut(s) 1434
MseI TTAA 5 cut(s) 149, 285, 321, 582, 981
Msp20I TGGCCA 1 cut(s) 1434
MspI CCGG 4 cut(s) 12, 34, 590, 659
MspR9I CCNGG 5 cut(s) 34, 218, 544, 563, 1051
MunI CAATTG 1 cut(s) 437
MvaI CCWGG 4 cut(s) 218, 544, 563, 1051
MwoI GCNNNNNNNGC 6 cut(s) 254, 269, 322, 344, 1280, 1431
NaeI GCCGGC 1 cut(s) 660
NciI CCSGG 1 cut(s) 34
NdeI CATATG 1 cut(s) 688
NdeII GATC 6 cut(s) 85, 565, 641, 769, 962, 1078
NgoMIV GCCGGC 1 cut(s) 658
NlaIII CATG 7 cut(s) 276, 572, 602, 1190, 1292, 1376, 1478
NlaIV GGNNCC 3 cut(s) 87, 346, 649
NmuCI GTSAC 2 cut(s) 424, 1299
PceI AGGCCT 2 cut(s) 670, 1459
PdiI GCCGGC 1 cut(s) 660
PdmI GAANNNNTTC 1 cut(s) 72
PfeI GAWTC 2 cut(s) 105, 1471
PflMI CCANNNNNTGG 2 cut(s) 392, 562
PfoI TCCNGGA 1 cut(s) 542
PkrI GCNGC 5 cut(s) 94, 97, 340, 361, 1012
PleI GAGTC 1 cut(s) 732
PpsI GAGTC 1 cut(s) 732
Psp6I CCWGG 4 cut(s) 216, 542, 561, 1049
PspGI CCWGG 4 cut(s) 216, 542, 561, 1049
PspN4I GGNNCC 3 cut(s) 87, 346, 649
PspPI GGNCC 2 cut(s) 1161, 1235
PstI CTGCAG 1 cut(s) 94
PsuI RGATCY 2 cut(s) 85, 641
RsaI GTAC 4 cut(s) 198, 637, 1249, 1464
RsaNI GTAC 4 cut(s) 197, 636, 1248, 1463
SaqAI TTAA 5 cut(s) 149, 285, 321, 582, 981
SatI GCNGC 5 cut(s) 93, 96, 339, 360, 1011
Sau3AI GATC 6 cut(s) 85, 565, 641, 769, 962, 1078
Sau96I GGNCC 2 cut(s) 1161, 1235
ScaI AGTACT 1 cut(s) 1249
SchI GAGTC 1 cut(s) 733
ScrFI CCNGG 5 cut(s) 34, 218, 544, 563, 1051
SduI GDGCHC 2 cut(s) 555, 955
SfaNI GCATC 2 cut(s) 671, 683
SfcI CTRYAG 3 cut(s) 90, 516, 739
SinI GGWCC 2 cut(s) 1161, 1235
SmlI CTYRAG 2 cut(s) 652, 969
SmoI CTYRAG 2 cut(s) 652, 969
SseBI AGGCCT 2 cut(s) 670, 1459
SsiI CCGC 2 cut(s) 360, 708
SspMI CTAG 3 cut(s) 666, 711, 1343
StuI AGGCCT 2 cut(s) 670, 1459
StyD4I CCNGG 5 cut(s) 32, 216, 542, 561, 1049
StyI CCWWGG 1 cut(s) 955
TaaI ACNGT 2 cut(s) 517, 617
TaiI ACGT 2 cut(s) 853, 1243
TaqI TCGA 5 cut(s) 786, 810, 961, 990, 1213
TatI WGTACW 3 cut(s) 196, 1247, 1462
TauI GCSGC 1 cut(s) 362
TfiI GAWTC 2 cut(s) 105, 1471
Tru1I TTAA 5 cut(s) 149, 285, 321, 582, 981
Tru9I TTAA 5 cut(s) 149, 285, 321, 582, 981
TscAI CASTG 2 cut(s) 1042, 1444
TseFI GTSAC 2 cut(s) 424, 1299
TseI GCWGC 4 cut(s) 92, 95, 338, 1010
Tsp45I GTSAC 2 cut(s) 424, 1299
TspDTI ATGAA 6 cut(s) 65, 81, 141, 489, 1187, 1305
TspGWI ACGGA 3 cut(s) 195, 306, 1287
TspRI CASTG 2 cut(s) 1042, 1444
Van91I CCANNNNNTGG 2 cut(s) 392, 562
VpaK11BI GGWCC 2 cut(s) 1161, 1235
XagI CCTNNNNNAGG 2 cut(s) 221, 1199
XapI RAATTY 4 cut(s) 236, 277, 585, 1292
XcmI CCANNNNNNNNNTGG 1 cut(s) 338
XmnI GAANNNNTTC 1 cut(s) 72
XspI CTAG 3 cut(s) 666, 711, 1343
ZrmI AGTACT 1 cut(s) 1249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.