Rmu_sc0009679.1_g000002

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009679.1
Physical Location & Seq
Forward (+)
10777 .. 14821
4045 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009679.1_g000002.1.cds

Sequence Viewer

Length: 1806 bp
atggcttcctttttgtctggcgattcttctaactttgctgtgagtgaaagtagttgctatagacagactgaggataaagaggaaggaggctcttggtacttctccaggaaggaaattgaagaaaattctccatctaaagtagatggcatagacttaaagaaagaggcgtatctacgaaagtcatactgtacttttctacaagatttggggatgagacttaaagtaccccaggtaacaattgcaacagccataattttctgtcatcggttctatgtttgccaatcgcatgcaaagaatgatagaaggaccattgcaacagtgtgtatgtttctcgccggtaaggttgaagaaactccccggcctctgaaagatgttatccttgtctcctatgaaattattcataagaaggatcctgcagcagctcagagaatcaagcaaaaggaggtatatgaacagcagaaggaattgattttaactggcgagagggttgttctcggaactcttgcttttgatttcaatgtacaccatccgtataaacccctggtggaggcaataaagaaattcaaagtagctcaaaatgctctcgcccaagttgcatggaattttgttaatgacggacttcggacttctctttgcttgcaatttaagccccaccacattgcagctggtgccatttttcttgccgccaagttcctcaaagtaaagcttccatcagatggcgagaaggtctggtggcaagagtttgatgtcaccccacgccaattggaggaggttagcaatcaaatgttggagctatatgaacaaaatagatttccatcttccgatgatgttgaaggaactgtagcaactgctacgaagactaaatccaggatggagcaccaagacctggatcatggctcgtcagttaaaattccggcctcacatgaggcaacaagtaatagtcatttgcaggctggaggtacaagatctggaacctcaaggccggcatctaggcctgcatctgagcagtcatatgttgagaatgattaccctgctagaacttcccagagtcaaaataatgattacagaagtgctggaatgacaggttctttggatcaaaatatggaagtcgaagacaatcaccaccccaaagtcgaggaagctcaaaatgtatcaaggtttgtgtccgagggacgtagtgaagaaggccaagaaagagagagtaatgacaggaagggtgaaataagggaaggaggggacaaacattttggccgaaatctggacaattcacaaagtgcccttggtcgatcacctcaagaagctattaagaaaatcgacaaggacaaagtaagggcagcattggagaaacgaaggaaagccactgctgatatgaccaggaaaacagatttgctggatgaggatgatctgattgagagggagctggaagatggtattgaactggctggtgggagtgagaaaaacaaacgggacagaaggcaaagctggtccaagtcctcacatagacaagaacatgagagccttcatcagggaaaacatcgagagggtgttggagatggtggaccacgttttagtactattgaagaaggtgaggtatcagcctttgaagctggacatgaatttccgtcacccaaatcaagcagtcgcaagagaaaggaaggaagccccctagaaattgttgcagaaaagaaacagagacatgattatcgccataatcactttgaccatactgaaaatcataacagggtaggcagagttggccacactgaaagggataataaaaggcctgtacaggagaatcatgtctga

Protein Analysis

601

Amino Acids

68.15

Weight (kDa)

6.72

Isoelectric Point (pI)

54.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 668
AccB7I CCANNNNNTGG 2 cut(s) 716, 886
AciI CCGC 1 cut(s) 684
AclWI GGATC 4 cut(s) 404, 417, 897, 1101
AcoI YGGCCR 2 cut(s) 1249, 1756
AcsI RAATTY 5 cut(s) 124, 560, 601, 909, 1616
AdeI CACNNNGTG 1 cut(s) 1274
AfaI GTAC 7 cut(s) 98, 190, 225, 522, 961, 1573, 1788
AfiI CCNNNNNNNGG 6 cut(s) 547, 716, 766, 886, 1258, 1525
AgsI TTSAA 8 cut(s) 119, 347, 517, 565, 833, 1436, 1580, 1604
AjnI CCWGG 6 cut(s) 104, 228, 540, 866, 885, 1373
Alw21I GWGCWC 1 cut(s) 879
Alw26I GTCTC 3 cut(s) 208, 388, 1687
AlwI GGATC 4 cut(s) 404, 417, 897, 1101
AoxI GGCC 8 cut(s) 359, 915, 980, 992, 1186, 1249, 1756, 1781
ApeKI GCWGC 4 cut(s) 416, 419, 662, 1334
ApoI RAATTY 5 cut(s) 124, 560, 601, 909, 1616
ArsI GACNNNNNNTTYG 4 cut(s) 1072, 1104, 1229, 1261
Asp700I GAANNNNTTC 1 cut(s) 396
AspS9I GGNCC 3 cut(s) 306, 1485, 1559
AsuC2I CCSGG 1 cut(s) 358
AsuHPI GGTGA 6 cut(s) 742, 1112, 1229, 1281, 1598, 1617
AvaII GGWCC 3 cut(s) 306, 1485, 1559
BaeGI GKGCMC 1 cut(s) 1279
BalI TGGCCA 1 cut(s) 1758
BamHI GGATCC 1 cut(s) 409
BanI GGYRCC 1 cut(s) 668
BbsI GAAGAC 2 cut(s) 863, 1119
Bbv12I GWGCWC 1 cut(s) 879
BbvI GCAGC 4 cut(s) 428, 431, 674, 1346
BccI CCATC 9 cut(s) 137, 139, 534, 710, 718, 823, 865, 1421, 1547
BciT130I CCWGG 6 cut(s) 106, 230, 542, 868, 887, 1375
BcnI CCSGG 1 cut(s) 358
BcoDI GTCTC 3 cut(s) 208, 388, 1687
BfaI CTAG 3 cut(s) 990, 1035, 1667
BfmI CTRYAG 3 cut(s) 58, 414, 840
BglII AGATCT 1 cut(s) 965
BisI GCNGC 5 cut(s) 417, 420, 663, 684, 1335
BlsI GCNGC 5 cut(s) 418, 421, 664, 685, 1336
BmcAI AGTACT 1 cut(s) 1573
Bme1390I CCNGG 7 cut(s) 106, 230, 358, 542, 868, 887, 1375
Bme18I GGWCC 3 cut(s) 306, 1485, 1559
BmgT120I GGNCC 3 cut(s) 306, 1485, 1559
BmiI GGNNCC 3 cut(s) 411, 670, 973
BmrFI CCNGG 7 cut(s) 106, 230, 358, 542, 868, 887, 1375
BmsI GCATC 2 cut(s) 995, 1007
BpiI GAAGAC 2 cut(s) 863, 1119
BpmI CTGGAG 2 cut(s) 88, 975
BpuEI CTTGAG 2 cut(s) 961, 1278
BpuMI CCSGG 1 cut(s) 358
BsaBI GATNNNNATC 1 cut(s) 814
BsaJI CCNNGG 5 cut(s) 228, 356, 540, 1167, 1279
Bsc4I CCNNNNNNNGG 6 cut(s) 547, 716, 766, 886, 1258, 1525
Bse118I RCCGGY 2 cut(s) 335, 982
Bse1I ACTGG 2 cut(s) 481, 1443
Bse3DI GCAATG 2 cut(s) 309, 657
Bse8I GATNNNNATC 1 cut(s) 814
BseBI CCWGG 6 cut(s) 106, 230, 542, 868, 887, 1375
BseDI CCNNGG 5 cut(s) 228, 356, 540, 1167, 1279
BseGI GGATG 5 cut(s) 216, 526, 876, 1399, 1405
BseJI GATNNNNATC 1 cut(s) 814
BseLI CCNNNNNNNGG 6 cut(s) 547, 716, 766, 886, 1258, 1525
BseMI GCAATG 2 cut(s) 309, 657
BseMII CTCAG 3 cut(s) 60, 437, 993
BseNI ACTGG 2 cut(s) 481, 1443
BseRI GAGGAG 1 cut(s) 782
BseSI GKGCMC 1 cut(s) 1279
BseXI GCAGC 4 cut(s) 428, 431, 674, 1346
BshFI GGCC 8 cut(s) 361, 917, 982, 994, 1188, 1251, 1758, 1783
BshNI GGYRCC 1 cut(s) 668
BsiHKAI GWGCWC 1 cut(s) 879
BsiSI CCGG 4 cut(s) 336, 358, 914, 983
BslFI GGGAC 3 cut(s) 1185, 1250, 1481
BslI CCNNNNNNNGG 6 cut(s) 547, 716, 766, 886, 1258, 1525
BsmAI GTCTC 3 cut(s) 208, 388, 1687
BsmFI GGGAC 3 cut(s) 1185, 1250, 1481
BsnI GGCC 8 cut(s) 361, 917, 982, 994, 1188, 1251, 1758, 1783
Bsp1286I GDGCHC 2 cut(s) 879, 1279
Bsp1407I TGTACA 2 cut(s) 520, 1786
Bsp143I GATC 6 cut(s) 409, 889, 965, 1093, 1286, 1402
BspACI CCGC 1 cut(s) 684
BspANI GGCC 8 cut(s) 361, 917, 982, 994, 1188, 1251, 1758, 1783
BspCNI CTCAG 3 cut(s) 61, 436, 994
BspLI GGNNCC 3 cut(s) 411, 670, 973
BspMAI CTGCAG 1 cut(s) 418
BspPI GGATC 4 cut(s) 404, 417, 897, 1101
BspT107I GGYRCC 1 cut(s) 668
BsrDI GCAATG 2 cut(s) 309, 657
BsrFI RCCGGY 2 cut(s) 335, 982
BsrGI TGTACA 2 cut(s) 520, 1786
BsrI ACTGG 2 cut(s) 481, 1443
BssAI RCCGGY 2 cut(s) 335, 982
BssECI CCNNGG 5 cut(s) 228, 356, 540, 1167, 1279
BssMI GATC 6 cut(s) 409, 889, 965, 1093, 1286, 1402
BssT1I CCWWGG 1 cut(s) 1279
Bst2UI CCWGG 6 cut(s) 106, 230, 542, 868, 887, 1375
Bst4CI ACNGT 3 cut(s) 188, 319, 841
BstAPI GCANNNNNTGC 1 cut(s) 668
BstAUI TGTACA 2 cut(s) 520, 1786
BstC8I GCNNGC 5 cut(s) 288, 638, 951, 984, 996
BstDEI CTNAG 3 cut(s) 69, 423, 1002
BstENI CCTNNNNNAGG 2 cut(s) 545, 1523
BstF5I GGATG 5 cut(s) 216, 526, 876, 1399, 1405
BstKTI GATC 6 cut(s) 412, 892, 968, 1096, 1289, 1405
BstMAI GTCTC 3 cut(s) 208, 388, 1687
BstMBI GATC 6 cut(s) 409, 889, 965, 1093, 1286, 1402
BstMWI GCNNNNNNNGC 6 cut(s) 578, 593, 646, 668, 1604, 1755
BstNI CCWGG 6 cut(s) 106, 230, 542, 868, 887, 1375
BstNSI RCATGY 1 cut(s) 290
BstSCI CCNGG 7 cut(s) 104, 228, 356, 540, 866, 885, 1373
BstSFI CTRYAG 3 cut(s) 58, 414, 840
BstSLI GKGCMC 1 cut(s) 1279
BstV1I GCAGC 4 cut(s) 428, 431, 674, 1346
BstV2I GAAGAC 2 cut(s) 863, 1119
BstX2I RGATCY 2 cut(s) 409, 965
BstYI RGATCY 2 cut(s) 409, 965
BsuRI GGCC 8 cut(s) 361, 917, 982, 994, 1188, 1251, 1758, 1783
BtsCI GGATG 5 cut(s) 216, 526, 876, 1399, 1405
BtsI GCAGTG 1 cut(s) 1359
BtsIMutI CAGTG 3 cut(s) 324, 1359, 1761
Cac8I GCNNGC 5 cut(s) 288, 638, 951, 984, 996
Cfr10I RCCGGY 2 cut(s) 335, 982
Cfr13I GGNCC 3 cut(s) 306, 1485, 1559
Csp6I GTAC 7 cut(s) 97, 189, 224, 521, 960, 1572, 1787
CspCI CAANNNNNGTGG 2 cut(s) 744, 779
CviAII CATG 8 cut(s) 287, 597, 893, 923, 1511, 1613, 1697, 1799
CviQI GTAC 7 cut(s) 97, 189, 224, 521, 960, 1572, 1787
DdeI CTNAG 3 cut(s) 69, 423, 1002
DpnI GATC 6 cut(s) 411, 891, 967, 1095, 1288, 1404
DpnII GATC 6 cut(s) 409, 889, 965, 1093, 1286, 1402
DraIII CACNNNGTG 1 cut(s) 1274
EaeI YGGCCR 2 cut(s) 1249, 1756
Eco130I CCWWGG 1 cut(s) 1279
Eco147I AGGCCT 2 cut(s) 994, 1783
Eco47I GGWCC 3 cut(s) 306, 1485, 1559
EcoNI CCTNNNNNAGG 2 cut(s) 545, 1523
EcoRII CCWGG 6 cut(s) 104, 228, 540, 866, 885, 1373
EcoT14I CCWWGG 1 cut(s) 1279
ErhI CCWWGG 1 cut(s) 1279
FaeI CATG 8 cut(s) 290, 600, 896, 926, 1514, 1616, 1700, 1802
FalI AAGNNNNNCTT 2 cut(s) 690, 722
FaqI GGGAC 3 cut(s) 1185, 1250, 1481
FatI CATG 8 cut(s) 286, 596, 892, 922, 1510, 1612, 1696, 1798
FauNDI CATATG 1 cut(s) 1012
Fnu4HI GCNGC 5 cut(s) 417, 420, 663, 684, 1335
FokI GGATG 5 cut(s) 223, 513, 883, 1406, 1412
Fsp4HI GCNGC 5 cut(s) 417, 420, 663, 684, 1335
FspBI CTAG 3 cut(s) 990, 1035, 1667
GluI GCNGC 5 cut(s) 417, 420, 663, 684, 1335
GsuI CTGGAG 2 cut(s) 88, 975
HaeIII GGCC 8 cut(s) 361, 917, 982, 994, 1188, 1251, 1758, 1783
HapII CCGG 4 cut(s) 336, 358, 914, 983
Hin1II CATG 8 cut(s) 290, 600, 896, 926, 1514, 1616, 1700, 1802
HindIII AAGCTT 1 cut(s) 704
HinfI GANTC 4 cut(s) 23, 429, 1048, 1795
HpaII CCGG 4 cut(s) 336, 358, 914, 983
HphI GGTGA 6 cut(s) 742, 1112, 1229, 1281, 1598, 1617
Hpy166II GTNNAC 2 cut(s) 523, 1559
Hpy188III TCNNGA 4 cut(s) 969, 1259, 1295, 1538
Hpy8I GTNNAC 2 cut(s) 523, 1559
HpyCH4III ACNGT 3 cut(s) 188, 319, 841
HpyCH4IV ACGT 2 cut(s) 1174, 1564
HpyF10VI GCNNNNNNNGC 6 cut(s) 578, 593, 646, 668, 1604, 1755
HpyF3I CTNAG 3 cut(s) 69, 423, 1002
HpySE526I ACGT 2 cut(s) 1174, 1564
Hsp92II CATG 8 cut(s) 290, 600, 896, 926, 1514, 1616, 1700, 1802
KroI GCCGGC 1 cut(s) 982
KroNI GCCGGC 1 cut(s) 984
Kzo9I GATC 6 cut(s) 409, 889, 965, 1093, 1286, 1402
LmnI GCTCC 3 cut(s) 790, 874, 1417
Lsp1109I GCAGC 4 cut(s) 428, 431, 674, 1346
LweI GCATC 2 cut(s) 995, 1007
MaeI CTAG 3 cut(s) 990, 1035, 1667
MaeII ACGT 2 cut(s) 1174, 1564
MaeIII GTNAC 3 cut(s) 232, 748, 1623
MalI GATC 6 cut(s) 411, 891, 967, 1095, 1288, 1404
MboI GATC 6 cut(s) 409, 889, 965, 1093, 1286, 1402
MboII GAAGA 9 cut(s) 18, 131, 359, 810, 868, 1124, 1193, 1436, 1592
MfeI CAATTG 2 cut(s) 237, 761
MflI RGATCY 2 cut(s) 409, 965
MhlI GDGCHC 2 cut(s) 879, 1279
MlsI TGGCCA 1 cut(s) 1758
MluNI TGGCCA 1 cut(s) 1758
MlyI GAGTC 1 cut(s) 1057
MmeI TCCRAC 2 cut(s) 768, 1528
Mox20I TGGCCA 1 cut(s) 1758
MroNI GCCGGC 1 cut(s) 982
MroXI GAANNNNTTC 1 cut(s) 396
MscI TGGCCA 1 cut(s) 1758
MseI TTAA 7 cut(s) 155, 219, 473, 609, 645, 906, 1305
Msp20I TGGCCA 1 cut(s) 1758
MspA1I CMGCKG 1 cut(s) 665
MspI CCGG 4 cut(s) 336, 358, 914, 983
MspR9I CCNGG 7 cut(s) 106, 230, 358, 542, 868, 887, 1375
MunI CAATTG 2 cut(s) 237, 761
MvaI CCWGG 6 cut(s) 106, 230, 542, 868, 887, 1375
MwoI GCNNNNNNNGC 6 cut(s) 578, 593, 646, 668, 1604, 1755
NaeI GCCGGC 1 cut(s) 984
NciI CCSGG 1 cut(s) 358
NdeI CATATG 1 cut(s) 1012
NdeII GATC 6 cut(s) 409, 889, 965, 1093, 1286, 1402
NgoMIV GCCGGC 1 cut(s) 982
NlaIII CATG 8 cut(s) 290, 600, 896, 926, 1514, 1616, 1700, 1802
NlaIV GGNNCC 3 cut(s) 411, 670, 973
NmuCI GTSAC 2 cut(s) 748, 1623
NspI RCATGY 1 cut(s) 290
PaeI GCATGC 1 cut(s) 290
PceI AGGCCT 2 cut(s) 994, 1783
PdiI GCCGGC 1 cut(s) 984
PdmI GAANNNNTTC 1 cut(s) 396
PfeI GAWTC 3 cut(s) 23, 429, 1795
PflMI CCANNNNNTGG 2 cut(s) 716, 886
PfoI TCCNGGA 2 cut(s) 104, 866
PkrI GCNGC 5 cut(s) 418, 421, 664, 685, 1336
PleI GAGTC 1 cut(s) 1056
PpsI GAGTC 1 cut(s) 1056
Psp6I CCWGG 6 cut(s) 104, 228, 540, 866, 885, 1373
PspGI CCWGG 6 cut(s) 104, 228, 540, 866, 885, 1373
PspN4I GGNNCC 3 cut(s) 411, 670, 973
PspPI GGNCC 3 cut(s) 306, 1485, 1559
PstI CTGCAG 1 cut(s) 418
PsuI RGATCY 2 cut(s) 409, 965
PvuII CAGCTG 1 cut(s) 665
RsaI GTAC 7 cut(s) 98, 190, 225, 522, 961, 1573, 1788
RsaNI GTAC 7 cut(s) 97, 189, 224, 521, 960, 1572, 1787
SaqAI TTAA 7 cut(s) 155, 219, 473, 609, 645, 906, 1305
SatI GCNGC 5 cut(s) 417, 420, 663, 684, 1335
Sau3AI GATC 6 cut(s) 409, 889, 965, 1093, 1286, 1402
Sau96I GGNCC 3 cut(s) 306, 1485, 1559
ScaI AGTACT 1 cut(s) 1573
SchI GAGTC 1 cut(s) 1057
ScrFI CCNGG 7 cut(s) 106, 230, 358, 542, 868, 887, 1375
SduI GDGCHC 2 cut(s) 879, 1279
SfaNI GCATC 2 cut(s) 995, 1007
SfcI CTRYAG 3 cut(s) 58, 414, 840
SinI GGWCC 3 cut(s) 306, 1485, 1559
SmlI CTYRAG 2 cut(s) 976, 1293
SmoI CTYRAG 2 cut(s) 976, 1293
SphI GCATGC 1 cut(s) 290
SseBI AGGCCT 2 cut(s) 994, 1783
SsiI CCGC 1 cut(s) 684
SspMI CTAG 3 cut(s) 990, 1035, 1667
StuI AGGCCT 2 cut(s) 994, 1783
StyD4I CCNGG 7 cut(s) 104, 228, 356, 540, 866, 885, 1373
StyI CCWWGG 1 cut(s) 1279
TaaI ACNGT 3 cut(s) 188, 319, 841
TaiI ACGT 2 cut(s) 1177, 1567
TaqI TCGA 5 cut(s) 1110, 1134, 1285, 1314, 1537
TatI WGTACW 4 cut(s) 188, 520, 1571, 1786
TauI GCSGC 1 cut(s) 686
TfiI GAWTC 3 cut(s) 23, 429, 1795
Tru1I TTAA 7 cut(s) 155, 219, 473, 609, 645, 906, 1305
Tru9I TTAA 7 cut(s) 155, 219, 473, 609, 645, 906, 1305
TscAI CASTG 3 cut(s) 324, 1366, 1768
TseFI GTSAC 2 cut(s) 748, 1623
TseI GCWGC 4 cut(s) 416, 419, 662, 1334
Tsp45I GTSAC 2 cut(s) 748, 1623
TspDTI ATGAA 6 cut(s) 389, 405, 465, 813, 1511, 1629
TspGWI ACGGA 3 cut(s) 519, 630, 1611
TspRI CASTG 3 cut(s) 324, 1366, 1768
Van91I CCANNNNNTGG 2 cut(s) 716, 886
VpaK11BI GGWCC 3 cut(s) 306, 1485, 1559
XagI CCTNNNNNAGG 2 cut(s) 545, 1523
XapI RAATTY 5 cut(s) 124, 560, 601, 909, 1616
XceI RCATGY 1 cut(s) 290
XcmI CCANNNNNNNNNTGG 1 cut(s) 662
XmnI GAANNNNTTC 1 cut(s) 396
XspI CTAG 3 cut(s) 990, 1035, 1667
ZrmI AGTACT 1 cut(s) 1573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.