Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001562

Physical Location & Seq

Genomic Coordinates Reverse (-)

74018346 .. 74024174

Gene Structure 5829 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00053170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGCTGGTTTTTTGCCTGCTGAGTCCTCTCATAGTGGAATCACTGGTATGTATGATGGTGGGTCCTCTAACGCTCAGGAGAGGCTGGAGGAAGGATCCTGTTGGTACTTTTACAGAAAGGAAATTGAAGAAAATTCTCCATCTAGACTAGATGGTATTGACTTGAAGAAGGAGACATATCTACGCAAGTCATACTGTACTTTTCTACAAGATTTGGGCATGAGACTTAAAGTATTGTCATATCATTTGTATCACAGCTTGCTACAGATTGCTATTGACATTGTAAATCTTTCTTTCCATATTAGACCCCAGACTATTGCAACAGTTTGTATGTTTCTTGCTGGCAAGGTTGAAGAAACTCCACGGCCACTAAAAGATGTTATCATCGTTTCTTATGAAATTATACATAAGAAGGATCCTGCAGCAGTTCAGAAGATCAAGCAAAAGGAGGTATATGAACAGCAGAAAGAACTAATTCTTAGTGGAGAGAGGGTTGTTCTTGCAACTCTTGGTTTTGATCTTAATTTACTGCATCCTTATAAACCCCTTGTTGAGGCGATAAAGAAATTTAAAGTAGCTCAAAATGCCCTTGCTCAAGTTGCATGGAATTTCGTCAATGATGGACTTCGGACATCTCTTTGCTTGCAATTTAAACCCCACCACATTGCAGCTGGTGCCATTTTCCTCGCTGCCAAATTCCTCAAAGTAAAGCTCCCGTCAGATGGCGAGAAGGTCTGGTGGCAAGAGTTTGACGTCACCCCACGCCAGTTGGAGGGTGGGTGTCCTCATTTTAATTCAGTAGAAGTTAGCAATCAAATGTTGGAACTTTATGAACAAAATAGAGCTCCAGCTTCCAACGAAGTGGAAGGAAGTACAGCTAGTGGTGCTAGTCATCGGGCCCCACCAAAAGGTACAGCTAGCAATGAAGAACATGCTACAAGACCTGGAACCTTGAAATCTTCATCATCTAGACCAGCTTCTGAGCATTCAGATGTTGACAATGGTGATGGACCTCCTAGAACCACCCAAAGTCGAAATAATGACTACAGAAGTACAGAAACGAAAAATGCTTCTGACCAAAATGTGGATGTTGAATGCAAAGATAATCAGCACCCCGGACCAATGTCATCCCACCAGGAAAAAGGAGGACAATCTCAAAATGCATCAAAATTTGCGTCAGATGGATGTGGTGAAGGTCAAGATAATAATGGGACATGTGAAACAAGAGAAGCAGGAGAATTGCAGGACAAACAATTTGATCGAAGTGTGGAGAATAGAACAGGTGCACTTGGCCAGTCACCTCAGGATGCTATAAAAAAGATTGACAGAAACAAGGTGAAGGCAGCGCTGGAGAAACGTAGGAAGTCTCAGGGTGATATGGCTCGAAAGAAAGATTTGATGGATGAAGATGATCTCATTGAGAGGGAACTGGAAGATGGTATTGAACTTGCTGCTGGGAGTCAAAGCCGGTCTAAGCCCTCAAATGGACCAGAACATGAGAACATACATGACGGAAAACATCAAGACAGTGTTGGGTATGGTGGAACTGATATAAATACTGTGGAAGAGGGTGAGGTATCTGCACATGATGATGGTGGCCAGGGATACCAATCACCCAAACGCAAGGCAGAAAGCCCGAACCTCGATGCTGTAGAGAAGAAGCAGCGTTGTGATTATGAGCCTGGAACCTCCCACCATAATGGGTTTGATTATGGAGAAGATCATGGCAGGAGGGTTGGACACTCAGAAAGGGATCAGAAAAGGCAAGCACAGGAGAATCATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000079 GO:0000307 GO:0001932 GO:0001934 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0016538 GO:0019207 GO:0019219 GO:0019220 GO:0019222 GO:0019887 GO:0030234 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032991 GO:0033674 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043549 GO:0044093 GO:0044424 GO:0044464 GO:0045737 GO:0045787 GO:0045859 GO:0045860 GO:0045893 GO:0045935 GO:0045937 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051726 GO:0060255 GO:0061695 GO:0065007 GO:0065009 GO:0071900 GO:0071902 GO:0080090 GO:0098772 GO:1901407 GO:1901409 GO:1902494 GO:1902554 GO:1902680 GO:1902911 GO:1903506 GO:1903508 GO:1904029 GO:1904031 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05202 map05202

Pfam Domains

Protein Families

Cyclin_N

Protein Analysis

595

Amino Acids

66.12

Weight (kDa)

5.84

Isoelectric Point (pI)

50.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_N	PF00134	38 - 175	1.8e-08	Cyclin, N-terminal domain
CycT2-like_C	PF21797	178 - 251	2.7e-06	Cyclin-T2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001562)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19600 AT5G45190 AT5G45190 AT5G45190
fragaria_vesca	FvH4_3g15520 FvH4_3g15520 FvH4_3g15520 FvH4_3g15521 FvH4_3g15521
malus_domestica	MD05G1222500.v1.1 MD05G1222600.v1.1 MD10G1204100.v1.1 MD10G1204200.v1.1
prunus_persica	Prupe.4G137700_v2.0.a1 Prupe.4G137800_v2.0.a1
pyrus_communis	pycom05g20520 pycom10g17480 pycom10g17490
rosa_chinensis	RchiOBHm_Chr5g0026141 RchiOBHm_Chr5g0026151
rosa_laevigata	RLG00000032906 RLG00000032907
rosa_multiflora	Rmu_co8230253.1_g000001 Rmu_co8464075.1_g000001 Rmu_sc0002806.1_g000001 Rmu_sc0002909.1_g000016 Rmu_sc0009679.1_g000001 Rmu_sc0009679.1_g000002 Rmu_sc0029141.1_g000001
rosa_roxburghii	Rroxscaffold_1G00053050 Rroxscaffold_1G00053160 Rroxscaffold_1G00053170
rosa_rugosa	Rorug05G0091000.1
rosa_samantha	Rh2CG288400 Rh5AG183800 Rh5AG183900 Rh5AG184000 Rh5BG180600 Rh5BG180700 Rh5BG180800 Rh5CG199600 Rh5CG199700 Rh5CG199800 Rh5CG201400 Rh5DG182200 Rh5DG182300 Rh5DG182400
rosa_wichuraiana	Rw5G016640 Rw5G016650 Rw5G016810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	540
AatII	GACGTC	1 cut(s)	756
AccB1I	GGYRCC	1 cut(s)	674
AccB7I	CCANNNNNTGG	1 cut(s)	1084
AclWI	GGATC	5 cut(s)	90, 103, 410, 423, 1761
AcoI	YGGCCR	3 cut(s)	365, 1291, 1597
AcsI	RAATTY	5 cut(s)	133, 566, 607, 695, 1169
AcyI	GRCGYC	1 cut(s)	753
AfaI	GTAC	5 cut(s)	107, 199, 874, 913, 1054
AfeI	AGCGCT	1 cut(s)	1347
AfiI	CCNNNNNNNGG	6 cut(s)	553, 722, 772, 908, 1084, 1484
AflIII	ACRYGT	1 cut(s)	1214
AgsI	TTSAA	6 cut(s)	128, 166, 353, 955, 1094, 1445
AjnI	CCWGG	4 cut(s)	943, 1134, 1599, 1681
AluBI	AGCT	9 cut(s)	258, 578, 671, 712, 845, 851, 878, 917, 977
AluI	AGCT	9 cut(s)	258, 578, 671, 712, 845, 851, 878, 917, 977
Alw21I	GWGCWC	2 cut(s)	847, 1288
Alw26I	GTCTC	3 cut(s)	167, 217, 1371
Alw44I	GTGCAC	1 cut(s)	1284
AlwI	GGATC	5 cut(s)	90, 103, 410, 423, 1761
AlwNI	CAGNNNCTG	1 cut(s)	980
Aor51HI	AGCGCT	1 cut(s)	1347
AoxI	GGCC	4 cut(s)	365, 897, 1291, 1597
ApaI	GGGCCC	1 cut(s)	901
ApaLI	GTGCAC	1 cut(s)	1284
ApeKI	GCWGC	6 cut(s)	422, 668, 689, 1343, 1451, 1663
ApoI	RAATTY	5 cut(s)	133, 566, 607, 695, 1169
ArsI	GACNNNNNNTTYG	4 cut(s)	1160, 1192, 1238, 1270
Asp700I	GAANNNNTTC	1 cut(s)	474
AspLEI	GCGC	1 cut(s)	1348
AspS9I	GGNCC	6 cut(s)	63, 897, 898, 1010, 1118, 1487
AsuC2I	CCSGG	1 cut(s)	1116
AsuHPI	GGTGA	8 cut(s)	748, 1016, 1202, 1290, 1348, 1385, 1583, 1605
AsuNHI	GCTAGC	1 cut(s)	917
AvaII	GGWCC	4 cut(s)	63, 1010, 1118, 1487
AxyI	CCTNAGG	1 cut(s)	1302
BaeGI	GKGCMC	2 cut(s)	901, 1288
BalI	TGGCCA	2 cut(s)	1293, 1599
BamHI	GGATCC	2 cut(s)	95, 415
BanI	GGYRCC	1 cut(s)	674
BanII	GRGCYC	2 cut(s)	847, 901
Bbv12I	GWGCWC	2 cut(s)	847, 1288
BbvI	GCAGC	6 cut(s)	434, 676, 680, 1355, 1438, 1675
BceAI	ACGGC	1 cut(s)	380
BciT130I	CCWGG	4 cut(s)	945, 1136, 1601, 1683
BciVI	GTATCC	1 cut(s)	1598
BcnI	CCSGG	1 cut(s)	1116
BcoDI	GTCTC	3 cut(s)	167, 217, 1371
BfaI	CTAG	7 cut(s)	144, 149, 879, 888, 918, 969, 1017
BfmI	CTRYAG	4 cut(s)	263, 420, 1045, 1650
BfoI	RGCGCY	1 cut(s)	1349
BfuI	GTATCC	1 cut(s)	1598
BisI	GCNGC	6 cut(s)	423, 669, 690, 1344, 1452, 1664
BlsI	GCNGC	6 cut(s)	424, 670, 691, 1345, 1453, 1665
Bme1390I	CCNGG	5 cut(s)	945, 1116, 1136, 1601, 1683
Bme18I	GGWCC	4 cut(s)	63, 1010, 1118, 1487
BmgT120I	GGNCC	6 cut(s)	63, 897, 898, 1010, 1118, 1487
BmiI	GGNNCC	8 cut(s)	64, 97, 417, 676, 899, 900, 949, 1687
BmrFI	CCNGG	5 cut(s)	945, 1116, 1136, 1601, 1683
BmsI	GCATC	4 cut(s)	541, 1172, 1297, 1636
BmtI	GCTAGC	1 cut(s)	921
BoxI	GACNNNNGTC	1 cut(s)	1123
BpmI	CTGGAG	3 cut(s)	107, 831, 1370
Bpu10I	CCTNAGC	1 cut(s)	75
BpuEI	CTTGAG	1 cut(s)	579
BpuMI	CCSGG	1 cut(s)	1116
BsaBI	GATNNNNATC	1 cut(s)	1609
BsaHI	GRCGYC	1 cut(s)	753
BsaJI	CCNNGG	3 cut(s)	362, 1114, 1600
BsaXI	ACNNNNNCTCC	4 cut(s)	477, 507, 764, 794
Bsc4I	CCNNNNNNNGG	6 cut(s)	553, 722, 772, 908, 1084, 1484
Bse118I	RCCGGY	1 cut(s)	1467
Bse1I	ACTGG	4 cut(s)	49, 766, 1294, 1434
Bse21I	CCTNAGG	1 cut(s)	1302
Bse3DI	GCAATG	2 cut(s)	663, 928
Bse8I	GATNNNNATC	1 cut(s)	1609
BseBI	CCWGG	4 cut(s)	945, 1136, 1601, 1683
BseDI	CCNNGG	3 cut(s)	362, 1114, 1600
BseGI	GGATG	6 cut(s)	532, 1093, 1127, 1190, 1312, 1408
BseJI	GATNNNNATC	1 cut(s)	1609
BseLI	CCNNNNNNNGG	6 cut(s)	553, 722, 772, 908, 1084, 1484
BseMI	GCAATG	2 cut(s)	663, 928
BseMII	CTCAG	6 cut(s)	12, 89, 972, 1316, 1382, 1758
BseNI	ACTGG	4 cut(s)	49, 766, 1294, 1434
BseSI	GKGCMC	2 cut(s)	901, 1288
BseXI	GCAGC	6 cut(s)	434, 676, 680, 1355, 1438, 1675
BseYI	CCCAGC	1 cut(s)	1454
BsgI	GTGCAG	1 cut(s)	1566
BshFI	GGCC	4 cut(s)	367, 899, 1293, 1599
BshNI	GGYRCC	1 cut(s)	674
BsiHKAI	GWGCWC	2 cut(s)	847, 1288
BsiSI	CCGG	2 cut(s)	1116, 1468
BslFI	GGGAC	1 cut(s)	1225
BslI	CCNNNNNNNGG	6 cut(s)	553, 722, 772, 908, 1084, 1484
BsmAI	GTCTC	3 cut(s)	167, 217, 1371
BsmFI	GGGAC	1 cut(s)	1225
BsmI	GAATGC	2 cut(s)	985, 1100
BsnI	GGCC	4 cut(s)	367, 899, 1293, 1599
Bsp120I	GGGCCC	1 cut(s)	897
Bsp1286I	GDGCHC	3 cut(s)	847, 901, 1288
Bsp143I	GATC	8 cut(s)	95, 415, 435, 517, 1258, 1411, 1720, 1753
BspANI	GGCC	4 cut(s)	367, 899, 1293, 1599
BspCNI	CTCAG	6 cut(s)	13, 88, 973, 1315, 1381, 1757
BspLI	GGNNCC	8 cut(s)	64, 97, 417, 676, 899, 900, 949, 1687
BspMAI	CTGCAG	1 cut(s)	424
BspOI	GCTAGC	1 cut(s)	921
BspPI	GGATC	5 cut(s)	90, 103, 410, 423, 1761
BspT107I	GGYRCC	1 cut(s)	674
BsrDI	GCAATG	2 cut(s)	663, 928
BsrFI	RCCGGY	1 cut(s)	1467
BsrI	ACTGG	4 cut(s)	49, 766, 1294, 1434
BssAI	RCCGGY	1 cut(s)	1467
BssECI	CCNNGG	3 cut(s)	362, 1114, 1600
BssMI	GATC	8 cut(s)	95, 415, 435, 517, 1258, 1411, 1720, 1753
BssNI	GRCGYC	1 cut(s)	753
Bst2UI	CCWGG	4 cut(s)	945, 1136, 1601, 1683
Bst4CI	ACNGT	4 cut(s)	197, 325, 1529, 1561
Bst6I	CTCTTC	1 cut(s)	1560
BstACI	GRCGYC	1 cut(s)	753
BstAPI	GCANNNNNTGC	1 cut(s)	674
BstC8I	GCNNGC	6 cut(s)	18, 260, 343, 644, 919, 1767
BstDEI	CTNAG	8 cut(s)	21, 75, 479, 981, 1302, 1368, 1473, 1744
BstDSI	CCRYGG	1 cut(s)	362
BstENI	CCTNNNNNAGG	1 cut(s)	551
BstF5I	GGATG	6 cut(s)	532, 1093, 1127, 1190, 1312, 1408
BstH2I	RGCGCY	1 cut(s)	1349
BstHHI	GCGC	1 cut(s)	1348
BstKTI	GATC	8 cut(s)	98, 418, 438, 520, 1261, 1414, 1723, 1756
BstMAI	GTCTC	3 cut(s)	167, 217, 1371
BstMBI	GATC	8 cut(s)	95, 415, 435, 517, 1258, 1411, 1720, 1753
BstMWI	GCNNNNNNNGC	4 cut(s)	584, 599, 674, 884
BstNI	CCWGG	4 cut(s)	945, 1136, 1601, 1683
BstNSI	RCATGY	2 cut(s)	935, 1218
BstPAI	GACNNNNGTC	1 cut(s)	1123
BstSCI	CCNGG	5 cut(s)	943, 1114, 1134, 1599, 1681
BstSFI	CTRYAG	4 cut(s)	263, 420, 1045, 1650
BstSLI	GKGCMC	2 cut(s)	901, 1288
BstV1I	GCAGC	6 cut(s)	434, 676, 680, 1355, 1438, 1675
BstX2I	RGATCY	2 cut(s)	95, 415
BstXI	CCANNNNNNTGG	2 cut(s)	862, 1700
BstYI	RGATCY	2 cut(s)	95, 415
Bsu36I	CCTNAGG	1 cut(s)	1302
BsuI	GTATCC	1 cut(s)	1598
BsuRI	GGCC	4 cut(s)	367, 899, 1293, 1599
BtgI	CCRYGG	1 cut(s)	362
BtsCI	GGATG	6 cut(s)	532, 1093, 1127, 1190, 1312, 1408
BtsIMutI	CAGTG	2 cut(s)	42, 1534
Cac8I	GCNNGC	6 cut(s)	18, 260, 343, 644, 919, 1767
CaiI	CAGNNNCTG	1 cut(s)	980
CfoI	GCGC	1 cut(s)	1348
Cfr10I	RCCGGY	1 cut(s)	1467
Cfr13I	GGNCC	6 cut(s)	63, 897, 898, 1010, 1118, 1487
CseI	GACGC	1 cut(s)	1164
Csp6I	GTAC	5 cut(s)	106, 198, 873, 912, 1053
CspCI	CAANNNNNGTGG	2 cut(s)	750, 785
CviAII	CATG	9 cut(s)	220, 603, 932, 1215, 1496, 1508, 1586, 1724, 1781
CviQI	GTAC	5 cut(s)	106, 198, 873, 912, 1053
DdeI	CTNAG	8 cut(s)	21, 75, 479, 981, 1302, 1368, 1473, 1744
DpnI	GATC	8 cut(s)	97, 417, 437, 519, 1260, 1413, 1722, 1755
DpnII	GATC	8 cut(s)	95, 415, 435, 517, 1258, 1411, 1720, 1753
DraI	TTTAAA	2 cut(s)	571, 652
EaeI	YGGCCR	3 cut(s)	365, 1291, 1597
Eam1104I	CTCTTC	1 cut(s)	1560
EarI	CTCTTC	1 cut(s)	1560
Ecl136II	GAGCTC	1 cut(s)	845
Eco24I	GRGCYC	2 cut(s)	847, 901
Eco47I	GGWCC	4 cut(s)	63, 1010, 1118, 1487
Eco47III	AGCGCT	1 cut(s)	1347
Eco53kI	GAGCTC	1 cut(s)	845
Eco81I	CCTNAGG	1 cut(s)	1302
EcoICRI	GAGCTC	1 cut(s)	845
EcoNI	CCTNNNNNAGG	1 cut(s)	551
EcoO109I	RGGNCCY	2 cut(s)	63, 898
EcoRII	CCWGG	4 cut(s)	943, 1134, 1599, 1681
EcoT22I	ATGCAT	1 cut(s)	1165
EcoT38I	GRGCYC	2 cut(s)	847, 901
FaeI	CATG	9 cut(s)	223, 606, 935, 1218, 1499, 1511, 1589, 1727, 1784
FaqI	GGGAC	1 cut(s)	1225
FatI	CATG	9 cut(s)	219, 602, 931, 1214, 1495, 1507, 1585, 1723, 1780
Fnu4HI	GCNGC	6 cut(s)	423, 669, 690, 1344, 1452, 1664
FokI	GGATG	6 cut(s)	519, 1100, 1114, 1197, 1319, 1415
FriOI	GRGCYC	2 cut(s)	847, 901
Fsp4HI	GCNGC	6 cut(s)	423, 669, 690, 1344, 1452, 1664
FspBI	CTAG	7 cut(s)	144, 149, 879, 888, 918, 969, 1017
GlaI	GCGC	1 cut(s)	1347
GluI	GCNGC	6 cut(s)	423, 669, 690, 1344, 1452, 1664
GsaI	CCCAGC	1 cut(s)	1458
GsuI	CTGGAG	3 cut(s)	107, 831, 1370
HaeII	RGCGCY	1 cut(s)	1349
HaeIII	GGCC	4 cut(s)	367, 899, 1293, 1599
HapII	CCGG	2 cut(s)	1116, 1468
HgaI	GACGC	1 cut(s)	1164
HhaI	GCGC	1 cut(s)	1348
Hin1I	GRCGYC	1 cut(s)	753
Hin1II	CATG	9 cut(s)	223, 606, 935, 1218, 1499, 1511, 1589, 1727, 1784
Hin6I	GCGC	1 cut(s)	1346
HinP1I	GCGC	1 cut(s)	1346
HincII	GTYRAC	1 cut(s)	997
HindII	GTYRAC	1 cut(s)	997
HinfI	GANTC	4 cut(s)	23, 39, 1459, 1777
HpaII	CCGG	2 cut(s)	1116, 1468
HphI	GGTGA	8 cut(s)	748, 1016, 1202, 1290, 1348, 1385, 1583, 1605
Hpy166II	GTNNAC	2 cut(s)	997, 1286
Hpy188I	TCNGA	9 cut(s)	432, 630, 721, 982, 991, 1075, 1180, 1747, 1758
Hpy188III	TCNNGA	6 cut(s)	77, 144, 969, 1199, 1304, 1523
Hpy8I	GTNNAC	2 cut(s)	997, 1286
HpyAV	CCTTC	7 cut(s)	86, 163, 406, 724, 860, 1187, 1333
HpyCH4III	ACNGT	4 cut(s)	197, 325, 1529, 1561
HpyCH4IV	ACGT	2 cut(s)	753, 1357
HpyF10VI	GCNNNNNNNGC	4 cut(s)	584, 599, 674, 884
HpyF3I	CTNAG	8 cut(s)	21, 75, 479, 981, 1302, 1368, 1473, 1744
HpySE526I	ACGT	2 cut(s)	753, 1357
Hsp92I	GRCGYC	1 cut(s)	753
Hsp92II	CATG	9 cut(s)	223, 606, 935, 1218, 1499, 1511, 1589, 1727, 1784
HspAI	GCGC	1 cut(s)	1346
Kzo9I	GATC	8 cut(s)	95, 415, 435, 517, 1258, 1411, 1720, 1753
LmnI	GCTCC	2 cut(s)	717, 850
Lsp1109I	GCAGC	6 cut(s)	434, 676, 680, 1355, 1438, 1675
LweI	GCATC	4 cut(s)	541, 1172, 1297, 1636
MaeI	CTAG	7 cut(s)	144, 149, 879, 888, 918, 969, 1017
MaeII	ACGT	2 cut(s)	753, 1357
MaeIII	GTNAC	2 cut(s)	754, 1296
MalI	GATC	8 cut(s)	97, 417, 437, 519, 1260, 1413, 1722, 1755
MboI	GATC	8 cut(s)	95, 415, 435, 517, 1258, 1411, 1720, 1753
MflI	RGATCY	2 cut(s)	95, 415
MhlI	GDGCHC	3 cut(s)	847, 901, 1288
MlsI	TGGCCA	2 cut(s)	1293, 1599
MluNI	TGGCCA	2 cut(s)	1293, 1599
MlyI	GAGTC	2 cut(s)	32, 1468
MmeI	TCCRAC	4 cut(s)	750, 801, 879, 1717
Mox20I	TGGCCA	2 cut(s)	1293, 1599
Mph1103I	ATGCAT	1 cut(s)	1165
MroXI	GAANNNNTTC	1 cut(s)	474
MscI	TGGCCA	2 cut(s)	1293, 1599
MseI	TTAA	5 cut(s)	228, 522, 570, 651, 792
MslI	CAYNNNNRTG	4 cut(s)	47, 990, 1590, 1698
Msp20I	TGGCCA	2 cut(s)	1293, 1599
MspA1I	CMGCKG	1 cut(s)	671
MspI	CCGG	2 cut(s)	1116, 1468
MspR9I	CCNGG	5 cut(s)	945, 1116, 1136, 1601, 1683
Mva1269I	GAATGC	2 cut(s)	985, 1100
MvaI	CCWGG	4 cut(s)	945, 1136, 1601, 1683
MwoI	GCNNNNNNNGC	4 cut(s)	584, 599, 674, 884
NciI	CCSGG	1 cut(s)	1116
NdeII	GATC	8 cut(s)	95, 415, 435, 517, 1258, 1411, 1720, 1753
NheI	GCTAGC	1 cut(s)	917
NlaIII	CATG	9 cut(s)	223, 606, 935, 1218, 1499, 1511, 1589, 1727, 1784
NlaIV	GGNNCC	8 cut(s)	64, 97, 417, 676, 899, 900, 949, 1687
NmuCI	GTSAC	2 cut(s)	754, 1296
NsiI	ATGCAT	1 cut(s)	1165
NspI	RCATGY	2 cut(s)	935, 1218
PciI	ACATGT	1 cut(s)	1214
PctI	GAATGC	2 cut(s)	985, 1100
PdmI	GAANNNNTTC	1 cut(s)	474
PfeI	GAWTC	2 cut(s)	39, 1777
PflMI	CCANNNNNTGG	1 cut(s)	1084
PkrI	GCNGC	6 cut(s)	424, 670, 691, 1345, 1453, 1665
PleI	GAGTC	2 cut(s)	31, 1467
PpsI	GAGTC	2 cut(s)	31, 1467
PpuMI	RGGWCCY	1 cut(s)	63
PscI	ACATGT	1 cut(s)	1214
PshAI	GACNNNNGTC	1 cut(s)	1123
PsiI	TTATAA	1 cut(s)	540
Psp124BI	GAGCTC	1 cut(s)	847
Psp5II	RGGWCCY	1 cut(s)	63
Psp6I	CCWGG	4 cut(s)	943, 1134, 1599, 1681
PspFI	CCCAGC	1 cut(s)	1454
PspGI	CCWGG	4 cut(s)	943, 1134, 1599, 1681
PspN4I	GGNNCC	8 cut(s)	64, 97, 417, 676, 899, 900, 949, 1687
PspOMI	GGGCCC	1 cut(s)	897
PspPI	GGNCC	6 cut(s)	63, 897, 898, 1010, 1118, 1487
PspPPI	RGGWCCY	1 cut(s)	63
PstI	CTGCAG	1 cut(s)	424
PstNI	CAGNNNCTG	1 cut(s)	980
PsuI	RGATCY	2 cut(s)	95, 415
PvuII	CAGCTG	1 cut(s)	671
RsaI	GTAC	5 cut(s)	107, 199, 874, 913, 1054
RsaNI	GTAC	5 cut(s)	106, 198, 873, 912, 1053
RseI	CAYNNNNRTG	4 cut(s)	47, 990, 1590, 1698
SacI	GAGCTC	1 cut(s)	847
SaqAI	TTAA	5 cut(s)	228, 522, 570, 651, 792
SatI	GCNGC	6 cut(s)	423, 669, 690, 1344, 1452, 1664
Sau3AI	GATC	8 cut(s)	95, 415, 435, 517, 1258, 1411, 1720, 1753
Sau96I	GGNCC	6 cut(s)	63, 897, 898, 1010, 1118, 1487
SchI	GAGTC	2 cut(s)	32, 1468
ScrFI	CCNGG	5 cut(s)	945, 1116, 1136, 1601, 1683
SduI	GDGCHC	3 cut(s)	847, 901, 1288
SfaNI	GCATC	4 cut(s)	541, 1172, 1297, 1636
SfcI	CTRYAG	4 cut(s)	263, 420, 1045, 1650
SinI	GGWCC	4 cut(s)	63, 1010, 1118, 1487
SmiMI	CAYNNNNRTG	4 cut(s)	47, 990, 1590, 1698
SmlI	CTYRAG	1 cut(s)	594
SmoI	CTYRAG	1 cut(s)	594
SspMI	CTAG	7 cut(s)	144, 149, 879, 888, 918, 969, 1017
SstI	GAGCTC	1 cut(s)	847
StyD4I	CCNGG	5 cut(s)	943, 1114, 1134, 1599, 1681
TaaI	ACNGT	4 cut(s)	197, 325, 1529, 1561
TaiI	ACGT	2 cut(s)	756, 1360
TaqI	TCGA	4 cut(s)	1033, 1261, 1384, 1644
TatI	WGTACW	3 cut(s)	197, 872, 1052
TfiI	GAWTC	2 cut(s)	39, 1777
Tru1I	TTAA	5 cut(s)	228, 522, 570, 651, 792
Tru9I	TTAA	5 cut(s)	228, 522, 570, 651, 792
TscAI	CASTG	2 cut(s)	49, 1534
TseFI	GTSAC	2 cut(s)	754, 1296
TseI	GCWGC	6 cut(s)	422, 668, 689, 1343, 1451, 1663
Tsp45I	GTSAC	2 cut(s)	754, 1296
TspDTI	ATGAA	6 cut(s)	411, 471, 846, 939, 951, 1419
TspGWI	ACGGA	1 cut(s)	1527
TspRI	CASTG	2 cut(s)	49, 1534
Van91I	CCANNNNNTGG	1 cut(s)	1084
VneI	GTGCAC	1 cut(s)	1284
VpaK11BI	GGWCC	4 cut(s)	63, 1010, 1118, 1487
XagI	CCTNNNNNAGG	1 cut(s)	551
XapI	RAATTY	5 cut(s)	133, 566, 607, 695, 1169
XbaI	TCTAGA	2 cut(s)	143, 968
XceI	RCATGY	2 cut(s)	935, 1218
XcmI	CCANNNNNNNNNTGG	2 cut(s)	668, 773
XmnI	GAANNNNTTC	1 cut(s)	474
XspI	CTAG	7 cut(s)	144, 149, 879, 888, 918, 969, 1017
ZraI	GACGTC	1 cut(s)	754
Zsp2I	ATGCAT	1 cut(s)	1165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.