pycom10g17490

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
20727604 .. 20732142
4539 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g17490.5

Sequence Viewer

Length: 1806 bp
ATGGCTAGTTCTTCCCCTGCTGAATCCACTCCTCATAGCGTGAATGATGGAAGTACCCATAAAGACATTCAGGACAGGATAGAGGAAGGATCCTATTGGTACTTCTTTAGAAAGGAAATTGAAGAAAATTCTCCATCTAGACGAGATGGCATTGACTTGAAGAAAGAGACATATTTACGCAAGTCATACTGTTCTTTTCTACAAGATTTGGGTATTAGACTTAAAGTACCCCAGTTGACGATTGCAACATCCATAATTTTCTGTCATCGATTCTTTCTTCGTCAATCACACGCAAAGAATGATAGAAGGACAATCGCGACAGTTTGTATGTTTCTTGCTGGGAAGGTTGAAGAAACTCCACGGCCACTAAAAGATGTTATCCTTGTGTCTTATGAAATTATGCACAAGAAAGATCCTAAAGCAGTACAAAGGATCAAGCAAAAGGAGGTATATGAACAGCAGAAGGAATTAATTTTACTTGGTGAGAGGGTTGTTCTTGGGACGCTTGGCTTTGATCTTAATGTACTCCATCCATATAAACCCCTCGTTGAAGCGATAAAGAGATTCAAAGTAGCTCAAAATGCCCTTGCTCAAGTTGCATGGAATTTTGTTAATGATGGACTTCGGACATCTCTATGTTTGCAATTTAAACCCCAGCACATTGCAGCTGGTGCCATATTTCTTGCTGCCAAGTTCTTAAGAGTAAAGCTCCCGTCAGATGGTGAGACAATCTGGTGGCAAGAGTTTGACATCACCCCACGCCAATTGGAGGAAGTTAGCAATCAAATGTTGGAACTGTATGAACAAAATCGAGTTCCAGCTTCCAATCAAGTGGCAGGAAGTGGAGGCGCTCATCGGACTCCAGCCAAAGGTACAGCTAGCAATGAAGAGCATGCTACAAGCAACAGTCATTTACAGGCTGGAGGTGCAAGGCCTGAAACCTTGAAACCTGCATCAGCTACACCAGATTTTGGAAATGATGACGTATCTCCTAGAACTAACCAATGTCAAAATAATGCCTACAGAAGTACAGAAATAAAAAACGTTCTGAACCAGAATGTTGATGTAGAATTCAAAGATAATCAACACGCTGCACCATTGTTGTCCGATCAGGAGAAGATTGGAGATGCTCAAAACGTATCAGAATTTCAGTCAGAGGGATGTGGTGAAGAAGGTCTAGAAGATAATGGGAAACTTGATACAATAGAAGCCGAGAAATTGAAGGACAAACAATTAGGTCAAAGCCTGGAAAATGGGCAAGGTTCACTTGGCCAGTCACCCCAGGATGTTATAAAGAAGATTGACAGAAACAAGGTGAAGGCAGCACTAGAAAAACGACGAAAGAGCCAAGGGGATATGAGTCAAAAAAAGGATCTGATGGATGAGGATGATCTTATTGAGAGAGAACTGGAAGATGGTATTGAACTGGCTTCTGGGAGTGAGAAAGTAAAGGGAGACGGGACTCAAAGCATGCCGAAGCCCTCAAGTACACCAGAAAATGAGTACCTGCATCCAGGAAAACATCATGAGGGTGTCCGTGATGATGGAACTGATCTAAATAATGCCGAAGGTGAGGGGTCTGCACTTGCTGATGGTGGCCAAGGATCACCCATTTTCAGTGACCACAAGAGAAAAGCAGTAAGCCCTCCTCCACTCGATGATGCAGAGAAGAAGCAGCGGCATGATTATGAACCTGGAACCCTGAACCATAATCAGTTTGATCATCCAGAAGATCACATCATGGCGGGCCTGGTTGGACACAGCGATATGGATCACATAAGGCCAGTACAGGAAAATCCTGTCTGA

Protein Analysis

602

Amino Acids

67.07

Weight (kDa)

5.62

Isoelectric Point (pI)

49.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1292
Acc36I ACCTGC 2 cut(s) 958, 1515
AccB1I GGYRCC 1 cut(s) 671
AccB7I CCANNNNNTGG 1 cut(s) 971
AccII CGCG 1 cut(s) 317
AciI CCGC 2 cut(s) 1678, 1745
AclI AACGTT 1 cut(s) 1044
AclWI GGATC 7 cut(s) 84, 97, 407, 440, 1380, 1612, 1779
AcoI YGGCCR 3 cut(s) 362, 1270, 1597
AcsI RAATTY 4 cut(s) 127, 604, 1070, 1145
AfiI CCNNNNNNNGG 4 cut(s) 719, 769, 869, 971
AflII CTTAAG 1 cut(s) 697
AgsI TTSAA 9 cut(s) 122, 160, 350, 551, 568, 946, 1075, 1222, 1424
AjnI CCWGG 5 cut(s) 1245, 1281, 1513, 1693, 1749
AluBI AGCT 6 cut(s) 575, 668, 709, 821, 878, 959
AluI AGCT 6 cut(s) 575, 668, 709, 821, 878, 959
Alw26I GTCTC 3 cut(s) 161, 719, 1449
AlwI GGATC 7 cut(s) 84, 97, 407, 440, 1380, 1612, 1779
AoxI GGCC 6 cut(s) 362, 932, 1270, 1597, 1747, 1781
ApeKI GCWGC 5 cut(s) 665, 686, 1091, 1322, 1675
ApoI RAATTY 4 cut(s) 127, 604, 1070, 1145
AseI ATTAAT 1 cut(s) 470
AspLEI GCGC 1 cut(s) 851
AspS9I GGNCC 1 cut(s) 1747
AsuHPI GGTGA 8 cut(s) 494, 734, 745, 1178, 1269, 1327, 1583, 1599
AsuNHI GCTAGC 1 cut(s) 878
BalI TGGCCA 2 cut(s) 1272, 1599
BamHI GGATCC 1 cut(s) 89
BanI GGYRCC 1 cut(s) 671
BbvI GCAGC 5 cut(s) 673, 677, 1078, 1334, 1687
BceAI ACGGC 1 cut(s) 377
BciT130I CCWGG 5 cut(s) 1247, 1283, 1515, 1695, 1751
BclI TGATCA 1 cut(s) 1720
BcoDI GTCTC 3 cut(s) 161, 719, 1449
BfaI CTAG 6 cut(s) 6, 138, 879, 993, 1178, 1328
BfmI CTRYAG 1 cut(s) 1021
BfoI RGCGCY 1 cut(s) 852
BfrI CTTAAG 1 cut(s) 697
BfuAI ACCTGC 2 cut(s) 958, 1515
BisI GCNGC 6 cut(s) 666, 687, 1092, 1323, 1676, 1679
BlsI GCNGC 6 cut(s) 667, 688, 1093, 1324, 1677, 1680
Bme1390I CCNGG 5 cut(s) 1247, 1283, 1515, 1695, 1751
BmgT120I GGNCC 1 cut(s) 1747
BmiI GGNNCC 3 cut(s) 91, 673, 1699
BmrFI CCNGG 5 cut(s) 1247, 1283, 1515, 1695, 1751
BmrI ACTGGG 1 cut(s) 226
BmsI GCATC 4 cut(s) 962, 1117, 1519, 1651
BmtI GCTAGC 1 cut(s) 882
BmuI ACTGGG 1 cut(s) 226
BplI GAGNNNNNCTC 2 cut(s) 693, 725
BpmI CTGGAG 2 cut(s) 846, 942
BpuEI CTTGAG 2 cut(s) 576, 1468
Bsa29I ATCGAT 1 cut(s) 268
BsaBI GATNNNNATC 1 cut(s) 1770
BsaJI CCNNGG 4 cut(s) 359, 1281, 1348, 1600
Bsc4I CCNNNNNNNGG 4 cut(s) 719, 769, 869, 971
Bse1I ACTGG 5 cut(s) 232, 1273, 1413, 1431, 1784
Bse3DI GCAATG 2 cut(s) 660, 889
Bse8I GATNNNNATC 1 cut(s) 1770
BseBI CCWGG 5 cut(s) 1247, 1283, 1515, 1695, 1751
BseCI ATCGAT 1 cut(s) 268
BseDI CCNNGG 4 cut(s) 359, 1281, 1348, 1600
BseGI GGATG 8 cut(s) 248, 529, 1166, 1291, 1387, 1393, 1510, 1723
BseJI GATNNNNATC 1 cut(s) 1770
BseLI CCNNNNNNNGG 4 cut(s) 719, 769, 869, 971
BseMI GCAATG 2 cut(s) 660, 889
BseNI ACTGG 5 cut(s) 232, 1273, 1413, 1431, 1784
BseRI GAGGAG 2 cut(s) 21, 1638
BseXI GCAGC 5 cut(s) 673, 677, 1078, 1334, 1687
BseYI CCCAGC 2 cut(s) 338, 654
BsgI GTGCAG 2 cut(s) 1077, 1566
Bsh1236I CGCG 1 cut(s) 317
BshFI GGCC 6 cut(s) 364, 934, 1272, 1599, 1749, 1783
BshNI GGYRCC 1 cut(s) 671
BshVI ATCGAT 1 cut(s) 268
BslFI GGGAC 2 cut(s) 514, 1474
BslI CCNNNNNNNGG 4 cut(s) 719, 769, 869, 971
BsmAI GTCTC 3 cut(s) 161, 719, 1449
BsmBI CGTCTC 1 cut(s) 1449
BsmFI GGGAC 2 cut(s) 514, 1474
BsnI GGCC 6 cut(s) 364, 934, 1272, 1599, 1749, 1783
Bsp68I TCGCGA 1 cut(s) 317
BspACI CCGC 2 cut(s) 1678, 1745
BspANI GGCC 6 cut(s) 364, 934, 1272, 1599, 1749, 1783
BspDI ATCGAT 1 cut(s) 268
BspFNI CGCG 1 cut(s) 317
BspHI TCATGA 1 cut(s) 1525
BspLI GGNNCC 3 cut(s) 91, 673, 1699
BspMI ACCTGC 2 cut(s) 958, 1515
BspOI GCTAGC 1 cut(s) 882
BspPI GGATC 7 cut(s) 84, 97, 407, 440, 1380, 1612, 1779
BspQI GCTCTTC 1 cut(s) 882
BspT107I GGYRCC 1 cut(s) 671
BspTI CTTAAG 1 cut(s) 697
BsrDI GCAATG 2 cut(s) 660, 889
BsrI ACTGG 5 cut(s) 232, 1273, 1413, 1431, 1784
BssECI CCNNGG 4 cut(s) 359, 1281, 1348, 1600
BssT1I CCWWGG 2 cut(s) 1348, 1600
Bst2UI CCWGG 5 cut(s) 1247, 1283, 1515, 1695, 1751
Bst4CI ACNGT 4 cut(s) 191, 322, 798, 908
Bst6I CTCTTC 1 cut(s) 882
BstAFI CTTAAG 1 cut(s) 697
BstAPI GCANNNNNTGC 1 cut(s) 671
BstC8I GCNNGC 4 cut(s) 880, 894, 1472, 1747
BstDSI CCRYGG 1 cut(s) 359
BstF5I GGATG 8 cut(s) 248, 529, 1166, 1291, 1387, 1393, 1510, 1723
BstFNI CGCG 1 cut(s) 317
BstH2I RGCGCY 1 cut(s) 852
BstHHI GCGC 1 cut(s) 851
BstMAI GTCTC 3 cut(s) 161, 719, 1449
BstMWI GCNNNNNNNGC 4 cut(s) 581, 596, 671, 926
BstNI CCWGG 5 cut(s) 1247, 1283, 1515, 1695, 1751
BstNSI RCATGY 2 cut(s) 896, 1474
BstSCI CCNGG 5 cut(s) 1245, 1281, 1513, 1693, 1749
BstSFI CTRYAG 1 cut(s) 1021
BstUI CGCG 1 cut(s) 317
BstV1I GCAGC 5 cut(s) 673, 677, 1078, 1334, 1687
BstX2I RGATCY 3 cut(s) 89, 412, 1372
BstXI CCANNNNNNTGG 1 cut(s) 832
BstYI RGATCY 3 cut(s) 89, 412, 1372
Bsu15I ATCGAT 1 cut(s) 268
BsuRI GGCC 6 cut(s) 364, 934, 1272, 1599, 1749, 1783
BsuTUI ATCGAT 1 cut(s) 268
BtgI CCRYGG 1 cut(s) 359
BtsCI GGATG 8 cut(s) 248, 529, 1166, 1291, 1387, 1393, 1510, 1723
BtsIMutI CAGTG 1 cut(s) 1624
BtuMI TCGCGA 1 cut(s) 317
BveI ACCTGC 2 cut(s) 958, 1515
Cac8I GCNNGC 4 cut(s) 880, 894, 1472, 1747
CciI TCATGA 1 cut(s) 1525
CfoI GCGC 1 cut(s) 851
Cfr13I GGNCC 1 cut(s) 1747
ClaI ATCGAT 1 cut(s) 268
CseI GACGC 1 cut(s) 511
CspCI CAANNNNNGTGG 2 cut(s) 747, 782
CviAII CATG 6 cut(s) 600, 893, 1471, 1526, 1682, 1741
DraI TTTAAA 1 cut(s) 649
EaeI YGGCCR 3 cut(s) 362, 1270, 1597
Eam1104I CTCTTC 1 cut(s) 882
EarI CTCTTC 1 cut(s) 882
Eco130I CCWWGG 2 cut(s) 1348, 1600
Eco147I AGGCCT 1 cut(s) 934
EcoRI GAATTC 1 cut(s) 1070
EcoRII CCWGG 5 cut(s) 1245, 1281, 1513, 1693, 1749
EcoT14I CCWWGG 2 cut(s) 1348, 1600
ErhI CCWWGG 2 cut(s) 1348, 1600
Esp3I CGTCTC 1 cut(s) 1449
FaeI CATG 6 cut(s) 603, 896, 1474, 1529, 1685, 1744
FalI AAGNNNNNCTT 2 cut(s) 1251, 1283
FaqI GGGAC 2 cut(s) 514, 1474
FatI CATG 6 cut(s) 599, 892, 1470, 1525, 1681, 1740
FauI CCCGC 1 cut(s) 1738
FbaI TGATCA 1 cut(s) 1720
Fnu4HI GCNGC 6 cut(s) 666, 687, 1092, 1323, 1676, 1679
FokI GGATG 8 cut(s) 235, 516, 1173, 1298, 1394, 1400, 1497, 1710
Fsp4HI GCNGC 6 cut(s) 666, 687, 1092, 1323, 1676, 1679
FspBI CTAG 6 cut(s) 6, 138, 879, 993, 1178, 1328
GlaI GCGC 1 cut(s) 850
GluI GCNGC 6 cut(s) 666, 687, 1092, 1323, 1676, 1679
GsaI CCCAGC 2 cut(s) 342, 658
GsuI CTGGAG 2 cut(s) 846, 942
HaeII RGCGCY 1 cut(s) 852
HaeIII GGCC 6 cut(s) 364, 934, 1272, 1599, 1749, 1783
HgaI GACGC 1 cut(s) 511
HhaI GCGC 1 cut(s) 851
Hin1II CATG 6 cut(s) 603, 896, 1474, 1529, 1685, 1744
Hin6I GCGC 1 cut(s) 849
HinP1I GCGC 1 cut(s) 849
HincII GTYRAC 1 cut(s) 237
HindII GTYRAC 1 cut(s) 237
HinfI GANTC 6 cut(s) 23, 270, 564, 859, 1360, 1462
HphI GGTGA 8 cut(s) 494, 734, 745, 1178, 1269, 1327, 1583, 1599
Hpy166II GTNNAC 3 cut(s) 237, 1265, 1490
Hpy188I TCNGA 9 cut(s) 627, 718, 858, 1050, 1108, 1144, 1156, 1377, 1805
Hpy188III TCNNGA 7 cut(s) 71, 138, 316, 1112, 1178, 1526, 1727
Hpy8I GTNNAC 3 cut(s) 237, 1265, 1490
Hpy99I CGWCG 1 cut(s) 1341
HpyAV CCTTC 8 cut(s) 80, 300, 337, 457, 1166, 1216, 1312, 1562
HpyCH4III ACNGT 4 cut(s) 191, 322, 798, 908
HpyCH4IV ACGT 3 cut(s) 984, 1044, 1137
HpyF10VI GCNNNNNNNGC 4 cut(s) 581, 596, 671, 926
HpySE526I ACGT 3 cut(s) 984, 1044, 1137
Hsp92II CATG 6 cut(s) 603, 896, 1474, 1529, 1685, 1744
HspAI GCGC 1 cut(s) 849
Ksp22I TGATCA 1 cut(s) 1720
LguI GCTCTTC 1 cut(s) 882
LmnI GCTCC 1 cut(s) 714
Lsp1109I GCAGC 5 cut(s) 673, 677, 1078, 1334, 1687
LweI GCATC 4 cut(s) 962, 1117, 1519, 1651
MaeI CTAG 6 cut(s) 6, 138, 879, 993, 1178, 1328
MaeII ACGT 3 cut(s) 984, 1044, 1137
MaeIII GTNAC 2 cut(s) 1275, 1619
MfeI CAATTG 1 cut(s) 764
MflI RGATCY 3 cut(s) 89, 412, 1372
MlsI TGGCCA 2 cut(s) 1272, 1599
MluNI TGGCCA 2 cut(s) 1272, 1599
MlyI GAGTC 3 cut(s) 853, 1369, 1456
MmeI TCCRAC 2 cut(s) 771, 1735
Mox20I TGGCCA 2 cut(s) 1272, 1599
MscI TGGCCA 2 cut(s) 1272, 1599
MseI TTAA 6 cut(s) 222, 470, 519, 612, 648, 698
MslI CAYNNNNRTG 3 cut(s) 634, 1530, 1686
Msp20I TGGCCA 2 cut(s) 1272, 1599
MspA1I CMGCKG 2 cut(s) 668, 1678
MspCI CTTAAG 1 cut(s) 697
MspR9I CCNGG 5 cut(s) 1247, 1283, 1515, 1695, 1751
MunI CAATTG 1 cut(s) 764
MvaI CCWGG 5 cut(s) 1247, 1283, 1515, 1695, 1751
MvnI CGCG 1 cut(s) 317
MwoI GCNNNNNNNGC 4 cut(s) 581, 596, 671, 926
NheI GCTAGC 1 cut(s) 878
NlaIII CATG 6 cut(s) 603, 896, 1474, 1529, 1685, 1744
NlaIV GGNNCC 3 cut(s) 91, 673, 1699
NmeAIII GCCGAG 1 cut(s) 1237
NmuCI GTSAC 2 cut(s) 1275, 1619
NruI TCGCGA 1 cut(s) 317
NspI RCATGY 2 cut(s) 896, 1474
PaeI GCATGC 2 cut(s) 896, 1474
PagI TCATGA 1 cut(s) 1525
PceI AGGCCT 1 cut(s) 934
PciSI GCTCTTC 1 cut(s) 882
PfeI GAWTC 3 cut(s) 23, 270, 564
PflMI CCANNNNNTGG 1 cut(s) 971
PfoI TCCNGGA 1 cut(s) 1513
PkrI GCNGC 6 cut(s) 667, 688, 1093, 1324, 1677, 1680
PleI GAGTC 3 cut(s) 853, 1368, 1456
PpsI GAGTC 3 cut(s) 853, 1368, 1456
PshBI ATTAAT 1 cut(s) 470
PsiI TTATAA 1 cut(s) 1292
Psp1406I AACGTT 1 cut(s) 1044
Psp6I CCWGG 5 cut(s) 1245, 1281, 1513, 1693, 1749
PspFI CCCAGC 2 cut(s) 338, 654
PspGI CCWGG 5 cut(s) 1245, 1281, 1513, 1693, 1749
PspN4I GGNNCC 3 cut(s) 91, 673, 1699
PspPI GGNCC 1 cut(s) 1747
PsuI RGATCY 3 cut(s) 89, 412, 1372
PvuII CAGCTG 1 cut(s) 668
RruI TCGCGA 1 cut(s) 317
RseI CAYNNNNRTG 3 cut(s) 634, 1530, 1686
SapI GCTCTTC 1 cut(s) 882
SaqAI TTAA 6 cut(s) 222, 470, 519, 612, 648, 698
SatI GCNGC 6 cut(s) 666, 687, 1092, 1323, 1676, 1679
Sau96I GGNCC 1 cut(s) 1747
SchI GAGTC 3 cut(s) 853, 1369, 1456
ScrFI CCNGG 5 cut(s) 1247, 1283, 1515, 1695, 1751
SfaNI GCATC 4 cut(s) 962, 1117, 1519, 1651
SfcI CTRYAG 1 cut(s) 1021
SmiMI CAYNNNNRTG 3 cut(s) 634, 1530, 1686
SmlI CTYRAG 3 cut(s) 591, 697, 1483
SmoI CTYRAG 3 cut(s) 591, 697, 1483
SphI GCATGC 2 cut(s) 896, 1474
SseBI AGGCCT 1 cut(s) 934
SsiI CCGC 2 cut(s) 1678, 1745
SspMI CTAG 6 cut(s) 6, 138, 879, 993, 1178, 1328
StuI AGGCCT 1 cut(s) 934
StyD4I CCNGG 5 cut(s) 1245, 1281, 1513, 1693, 1749
StyI CCWWGG 2 cut(s) 1348, 1600
TaaI ACNGT 4 cut(s) 191, 322, 798, 908
TaiI ACGT 3 cut(s) 987, 1047, 1140
TaqI TCGA 3 cut(s) 268, 811, 1656
TatI WGTACW 5 cut(s) 424, 523, 1028, 1487, 1786
TauI GCSGC 1 cut(s) 1681
TfiI GAWTC 3 cut(s) 23, 270, 564
Tru1I TTAA 6 cut(s) 222, 470, 519, 612, 648, 698
Tru9I TTAA 6 cut(s) 222, 470, 519, 612, 648, 698
TscAI CASTG 1 cut(s) 1624
TseFI GTSAC 2 cut(s) 1275, 1619
TseI GCWGC 5 cut(s) 665, 686, 1091, 1322, 1675
Tsp45I GTSAC 2 cut(s) 1275, 1619
TspDTI ATGAA 5 cut(s) 408, 468, 816, 900, 1704
TspGWI ACGGA 1 cut(s) 1526
TspRI CASTG 1 cut(s) 1624
Van91I CCANNNNNTGG 1 cut(s) 971
Vha464I CTTAAG 1 cut(s) 697
VspI ATTAAT 1 cut(s) 470
XapI RAATTY 4 cut(s) 127, 604, 1070, 1145
XbaI TCTAGA 2 cut(s) 137, 1177
XceI RCATGY 2 cut(s) 896, 1474
XspI CTAG 6 cut(s) 6, 138, 879, 993, 1178, 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.