pycom12g19820

Folate receptor family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0001032
Physical Location & Seq
Reverse (-)
21526725 .. 21529259
2535 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g19820.3

Sequence Viewer

Length: 864 bp
ATGGGTTGCGCGTCTCTGATCCTGCTGCTCGTTCTCAATACACTCGTCCCCTCTTTAACTGGTAAACCTGACAGTGTATGCATTTCTCAAGGCGGTCGTTTCCCACCATTCTCTTCCGAGGGTAAACCTCCAAAACGTCTGAGTAAGGGACCCAAAGATCTGACCCTTTGCAGAGTGTTCCGCAAAAAAACTTGCTGTGATGTAGCCCAGACACATCCTGCACTGGTATCCGTTAGGAAGTTGGCTTCATCAGGGGAAGCTGGCCCAGAGTGCTTGCATGTATGGGAATTACTGGAATGTTCCATCTGTGATCCCCGCATTGGCGTGCAGTCAGGACCTCCAGCTATATGTGCCTCTTTCTGTGACAGGGTTTTTGAGGCTTGTGCTGAGGCTTACTACTCTACGGATGCAATAACACAGGTTCTAGCACCATGTGGAGTAAATGATTATGTTTGCGGCAGGGCCTCTGAATGGATTCGTAATGGCACAGAGTTCTGCCATGCGGCAGGATTTGCTGTTAAAGATGATGTATCCGTGAGCAATGAAGAAGCATTTTGCTATGGCGGTAAAGGCAGTCTTGACTTGATTGCTGATTCATGGAAGGCTTCACCTTCTGAGGTGCCCCAGAAAGCTGAGAGCTTGAGGCTGCTAGGGGAATTCCGGCAGAGGTGGTGGGAAATGCCATTTAGTGAACGAGTTTCTTGGGCCGTCGGAGGATTGGTCCTTACAGCCGGCCTATTGTTTGTAAGCAAACGAAAACGACGTAGCCAGCGCGACAATGTAGCCGCTCTACGAATCAGGAAATTTGAAGCCAAGATAAACCAGAAATCTCCTAGTAGTCCGAGAAGTAGGAAAAACAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Folate_rec

Protein Analysis

288

Amino Acids

31.39

Weight (kDa)

9.03

Isoelectric Point (pI)

54.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 619
AccBSI CCGCTC 1 cut(s) 788
AccII CGCG 2 cut(s) 11, 774
AciI CCGC 7 cut(s) 93, 181, 316, 456, 503, 564, 786
AclWI GGATC 2 cut(s) 13, 305
AcsI RAATTY 2 cut(s) 656, 803
AdeI CACNNNGTG 1 cut(s) 434
AfiI CCNNNNNNNGG 2 cut(s) 320, 471
AgsI TTSAA 1 cut(s) 809
AluBI AGCT 4 cut(s) 260, 344, 632, 639
AluI AGCT 4 cut(s) 260, 344, 632, 639
Alw26I GTCTC 1 cut(s) 18
AlwI GGATC 2 cut(s) 13, 305
AoxI GGCC 4 cut(s) 262, 462, 705, 733
ApeKI GCWGC 2 cut(s) 25, 646
ApoI RAATTY 2 cut(s) 656, 803
ArsI GACNNNNNNTTYG 2 cut(s) 356, 388
Asp700I GAANNNNTTC 1 cut(s) 474
AspLEI GCGC 2 cut(s) 11, 774
AspS9I GGNCC 6 cut(s) 149, 263, 335, 462, 705, 721
AsuHPI GGTGA 1 cut(s) 600
AvaII GGWCC 3 cut(s) 149, 335, 721
BaeGI GKGCMC 1 cut(s) 624
BanI GGYRCC 1 cut(s) 619
BbvCI CCTCAGC 1 cut(s) 387
BbvI GCAGC 2 cut(s) 12, 633
BccI CCATC 1 cut(s) 311
BceAI ACGGC 1 cut(s) 692
BciVI GTATCC 2 cut(s) 238, 541
BcoDI GTCTC 1 cut(s) 18
BfaI CTAG 3 cut(s) 425, 650, 834
BfuI GTATCC 2 cut(s) 238, 541
BglII AGATCT 1 cut(s) 157
BisI GCNGC 5 cut(s) 26, 457, 504, 647, 786
BlsI GCNGC 5 cut(s) 27, 458, 505, 648, 787
Bme18I GGWCC 3 cut(s) 149, 335, 721
BmgT120I GGNCC 6 cut(s) 149, 263, 335, 462, 705, 721
BmiI GGNNCC 3 cut(s) 150, 151, 621
BmsI GCATC 1 cut(s) 397
BpmI CTGGAG 1 cut(s) 324
Bpu10I CCTNAGC 1 cut(s) 387
BpuEI CTTGAG 2 cut(s) 72, 661
BsaJI CCNNGG 1 cut(s) 117
BsaXI ACNNNNNCTCC 2 cut(s) 705, 735
Bsc4I CCNNNNNNNGG 2 cut(s) 320, 471
Bse118I RCCGGY 1 cut(s) 731
Bse1I ACTGG 3 cut(s) 64, 228, 297
Bse3DI GCAATG 1 cut(s) 547
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 2 cut(s) 214, 412
BseLI CCNNNNNNNGG 2 cut(s) 320, 471
BseMI GCAATG 1 cut(s) 547
BseMII CTCAG 4 cut(s) 131, 378, 606, 624
BseNI ACTGG 3 cut(s) 64, 228, 297
BseSI GKGCMC 1 cut(s) 624
BseXI GCAGC 2 cut(s) 12, 633
BsgI GTGCAG 2 cut(s) 204, 347
Bsh1236I CGCG 2 cut(s) 11, 774
Bsh1285I CGRYCG 1 cut(s) 97
BshFI GGCC 4 cut(s) 264, 464, 707, 735
BshNI GGYRCC 1 cut(s) 619
BsiEI CGRYCG 1 cut(s) 97
BsiSI CCGG 2 cut(s) 661, 732
BslFI GGGAC 2 cut(s) 32, 162
BslI CCNNNNNNNGG 2 cut(s) 320, 471
BsmAI GTCTC 1 cut(s) 18
BsmBI CGTCTC 1 cut(s) 18
BsmFI GGGAC 2 cut(s) 32, 162
BsnI GGCC 4 cut(s) 264, 464, 707, 735
Bsp1286I GDGCHC 1 cut(s) 624
Bsp143I GATC 3 cut(s) 18, 157, 310
BspACI CCGC 7 cut(s) 93, 181, 316, 456, 503, 564, 786
BspANI GGCC 4 cut(s) 264, 464, 707, 735
BspCNI CTCAG 4 cut(s) 132, 379, 607, 625
BspFNI CGCG 2 cut(s) 11, 774
BspLI GGNNCC 3 cut(s) 150, 151, 621
BspPI GGATC 2 cut(s) 13, 305
BspT107I GGYRCC 1 cut(s) 619
BsrBI CCGCTC 1 cut(s) 788
BsrDI GCAATG 1 cut(s) 547
BsrFI RCCGGY 1 cut(s) 731
BsrI ACTGG 3 cut(s) 64, 228, 297
BssAI RCCGGY 1 cut(s) 731
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 3 cut(s) 18, 157, 310
Bst4CI ACNGT 1 cut(s) 74
Bst6I CTCTTC 1 cut(s) 118
BstAPI GCANNNNNTGC 1 cut(s) 512
BstC8I GCNNGC 5 cut(s) 262, 275, 326, 733, 770
BstDEI CTNAG 4 cut(s) 140, 387, 615, 633
BstF5I GGATG 2 cut(s) 214, 412
BstFNI CGCG 2 cut(s) 11, 774
BstHHI GCGC 2 cut(s) 11, 774
BstKTI GATC 3 cut(s) 21, 160, 313
BstMAI GTCTC 1 cut(s) 18
BstMBI GATC 3 cut(s) 18, 157, 310
BstMCI CGRYCG 1 cut(s) 97
BstMWI GCNNNNNNNGC 4 cut(s) 270, 350, 512, 570
BstNSI RCATGY 1 cut(s) 281
BstSLI GKGCMC 1 cut(s) 624
BstUI CGCG 2 cut(s) 11, 774
BstV1I GCAGC 2 cut(s) 12, 633
BstX2I RGATCY 1 cut(s) 157
BstYI RGATCY 1 cut(s) 157
BsuI GTATCC 2 cut(s) 238, 541
BsuRI GGCC 4 cut(s) 264, 464, 707, 735
BtsCI GGATG 2 cut(s) 214, 412
BtsIMutI CAGTG 2 cut(s) 79, 221
Cac8I GCNNGC 5 cut(s) 262, 275, 326, 733, 770
CfoI GCGC 2 cut(s) 11, 774
Cfr10I RCCGGY 1 cut(s) 731
Cfr13I GGNCC 6 cut(s) 149, 263, 335, 462, 705, 721
CviAII CATG 4 cut(s) 278, 432, 500, 597
DdeI CTNAG 4 cut(s) 140, 387, 615, 633
DpnI GATC 3 cut(s) 20, 159, 312
DpnII GATC 3 cut(s) 18, 157, 310
DraIII CACNNNGTG 1 cut(s) 434
Eam1104I CTCTTC 1 cut(s) 118
EarI CTCTTC 1 cut(s) 118
Eco47I GGWCC 3 cut(s) 149, 335, 721
EcoO109I RGGNCCY 3 cut(s) 149, 335, 462
EcoRI GAATTC 1 cut(s) 656
EcoT22I ATGCAT 1 cut(s) 83
Esp3I CGTCTC 1 cut(s) 18
FaeI CATG 4 cut(s) 281, 435, 503, 600
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 2 cut(s) 32, 162
FatI CATG 4 cut(s) 277, 431, 499, 596
FauI CCCGC 1 cut(s) 323
Fnu4HI GCNGC 5 cut(s) 26, 457, 504, 647, 786
FokI GGATG 2 cut(s) 201, 419
Fsp4HI GCNGC 5 cut(s) 26, 457, 504, 647, 786
FspBI CTAG 3 cut(s) 425, 650, 834
GlaI GCGC 2 cut(s) 10, 773
GluI GCNGC 5 cut(s) 26, 457, 504, 647, 786
GsuI CTGGAG 1 cut(s) 324
HaeIII GGCC 4 cut(s) 264, 464, 707, 735
HapII CCGG 2 cut(s) 661, 732
HhaI GCGC 2 cut(s) 11, 774
Hin1II CATG 4 cut(s) 281, 435, 503, 600
Hin6I GCGC 2 cut(s) 9, 772
HinP1I GCGC 2 cut(s) 9, 772
HinfI GANTC 3 cut(s) 475, 593, 795
HpaII CCGG 2 cut(s) 661, 732
HphI GGTGA 1 cut(s) 600
Hpy166II GTNNAC 3 cut(s) 65, 125, 692
Hpy188I TCNGA 8 cut(s) 18, 118, 141, 162, 469, 616, 713, 843
Hpy188III TCNNGA 3 cut(s) 333, 578, 799
Hpy8I GTNNAC 3 cut(s) 65, 125, 692
Hpy99I CGWCG 2 cut(s) 713, 765
HpyAV CCTTC 2 cut(s) 595, 621
HpyCH4III ACNGT 1 cut(s) 74
HpyCH4IV ACGT 2 cut(s) 136, 763
HpyCH4V TGCA 6 cut(s) 81, 171, 221, 277, 328, 410
HpyF10VI GCNNNNNNNGC 4 cut(s) 270, 350, 512, 570
HpyF3I CTNAG 4 cut(s) 140, 387, 615, 633
HpySE526I ACGT 2 cut(s) 136, 763
Hsp92II CATG 4 cut(s) 281, 435, 503, 600
HspAI GCGC 2 cut(s) 9, 772
KflI GGGWCCC 1 cut(s) 149
KroI GCCGGC 1 cut(s) 731
KroNI GCCGGC 1 cut(s) 733
Kzo9I GATC 3 cut(s) 18, 157, 310
Lsp1109I GCAGC 2 cut(s) 12, 633
LweI GCATC 1 cut(s) 397
MaeI CTAG 3 cut(s) 425, 650, 834
MaeII ACGT 2 cut(s) 136, 763
MaeIII GTNAC 1 cut(s) 362
MalI GATC 3 cut(s) 20, 159, 312
MbiI CCGCTC 1 cut(s) 788
MboI GATC 3 cut(s) 18, 157, 310
MboII GAAGA 2 cut(s) 105, 557
MflI RGATCY 1 cut(s) 157
MhlI GDGCHC 1 cut(s) 624
MluCI AATT 3 cut(s) 287, 656, 803
MmeI TCCRAC 1 cut(s) 691
Mph1103I ATGCAT 1 cut(s) 83
MroNI GCCGGC 1 cut(s) 731
MroXI GAANNNNTTC 1 cut(s) 474
MseI TTAA 2 cut(s) 56, 519
MslI CAYNNNNRTG 1 cut(s) 323
MspI CCGG 2 cut(s) 661, 732
MvnI CGCG 2 cut(s) 11, 774
MwoI GCNNNNNNNGC 4 cut(s) 270, 350, 512, 570
NaeI GCCGGC 1 cut(s) 733
NdeII GATC 3 cut(s) 18, 157, 310
NgoMIV GCCGGC 1 cut(s) 731
NlaIII CATG 4 cut(s) 281, 435, 503, 600
NlaIV GGNNCC 3 cut(s) 150, 151, 621
NmuCI GTSAC 1 cut(s) 362
NsiI ATGCAT 1 cut(s) 83
NspI RCATGY 1 cut(s) 281
PcsI WCGNNNNNNNCGW 1 cut(s) 760
PdiI GCCGGC 1 cut(s) 733
PdmI GAANNNNTTC 1 cut(s) 474
PfeI GAWTC 3 cut(s) 475, 593, 795
PkrI GCNGC 5 cut(s) 27, 458, 505, 648, 787
PpuMI RGGWCCY 2 cut(s) 149, 335
Psp5II RGGWCCY 2 cut(s) 149, 335
PspN4I GGNNCC 3 cut(s) 150, 151, 621
PspPI GGNCC 6 cut(s) 149, 263, 335, 462, 705, 721
PspPPI RGGWCCY 2 cut(s) 149, 335
PsuI RGATCY 1 cut(s) 157
RseI CAYNNNNRTG 1 cut(s) 323
SaqAI TTAA 2 cut(s) 56, 519
SatI GCNGC 5 cut(s) 26, 457, 504, 647, 786
Sau3AI GATC 3 cut(s) 18, 157, 310
Sau96I GGNCC 6 cut(s) 149, 263, 335, 462, 705, 721
SduI GDGCHC 1 cut(s) 624
SfaNI GCATC 1 cut(s) 397
SinI GGWCC 3 cut(s) 149, 335, 721
SmiMI CAYNNNNRTG 1 cut(s) 323
SmlI CTYRAG 2 cut(s) 87, 640
SmoI CTYRAG 2 cut(s) 87, 640
Sse9I AATT 3 cut(s) 287, 656, 803
SsiI CCGC 7 cut(s) 93, 181, 316, 456, 503, 564, 786
SspMI CTAG 3 cut(s) 425, 650, 834
TaaI ACNGT 1 cut(s) 74
TaiI ACGT 2 cut(s) 139, 766
TasI AATT 3 cut(s) 287, 656, 803
TauI GCSGC 3 cut(s) 459, 506, 788
TfiI GAWTC 3 cut(s) 475, 593, 795
Tru1I TTAA 2 cut(s) 56, 519
Tru9I TTAA 2 cut(s) 56, 519
TscAI CASTG 2 cut(s) 79, 228
TseFI GTSAC 1 cut(s) 362
TseI GCWGC 2 cut(s) 25, 646
Tsp45I GTSAC 1 cut(s) 362
TspDTI ATGAA 3 cut(s) 237, 558, 585
TspGWI ACGGA 3 cut(s) 220, 419, 523
TspRI CASTG 2 cut(s) 79, 228
VpaK11BI GGWCC 3 cut(s) 149, 335, 721
XapI RAATTY 2 cut(s) 656, 803
XceI RCATGY 1 cut(s) 281
XmnI GAANNNNTTC 1 cut(s) 474
XspI CTAG 3 cut(s) 425, 650, 834
Zsp2I ATGCAT 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.